Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:22:37 (3788456): wrapper (7.7.26015): starting
06:22:37 (3788456): wrapper: running run_atlas (--nthreads 11)
[2025-10-13 06:22:37] Arguments: --nthreads 11
[2025-10-13 06:22:37] Threads: 11
[2025-10-13 06:22:37] Checking for CVMFS
[2025-10-13 06:22:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 06:22:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 06:22:37] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 06:22:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 06:22:37] 2.13.2.0 79137 136217 560296 151658 3 292 32124542 40960001 36263 16776704 0 477729689 99.819 224618128 32266 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 06:22:37] CVMFS is ok
[2025-10-13 06:22:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 06:22:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 06:22:37] Further information can be found at the LHC@home message board.
[2025-10-13 06:22:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 06:22:37] Checking for apptainer binary...
[2025-10-13 06:22:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 06:22:37] Running /usr/bin/apptainer --version
[2025-10-13 06:22:37] apptainer version 1.4.3-1.el9
[2025-10-13 06:22:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 06:22:37] c8-7-6.aglt2.org
[2025-10-13 06:22:37] apptainer works
[2025-10-13 06:22:37] Set ATHENA_PROC_NUMBER=11
[2025-10-13 06:22:37] Set ATHENA_CORE_NUMBER=11
[2025-10-13 06:22:37] Starting ATLAS job with PandaID=6842808747
[2025-10-13 06:22:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 07:30:07]  *** The last 200 lines of the pilot log: ***
[2025-10-13 07:30:07] 2025-10-13 11:29:06,045 | INFO     | monitor loop #251: job 0:6842808747 is in state 'finished'
[2025-10-13 07:30:07] 2025-10-13 11:29:06,045 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 07:30:07] 2025-10-13 11:29:07,527 | INFO     | time since job start (3978s) is within the limit (172800.0s)
[2025-10-13 07:30:07] 2025-10-13 11:29:08,550 | INFO     | monitor loop #252: job 0:6842808747 is in state 'finished'
[2025-10-13 07:30:07] 2025-10-13 11:29:08,550 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 07:30:07] 2025-10-13 11:29:09,540 | INFO     | time since job start (3980s) is within the limit (172800.0s)
[2025-10-13 07:30:07] 2025-10-13 11:29:11,055 | INFO     | monitor loop #253: job 0:6842808747 is in state 'finished'
[2025-10-13 07:30:07] 2025-10-13 11:29:11,055 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 07:30:07] 2025-10-13 11:29:11,547 | INFO     | time since job start (3982s) is within the limit (172800.0s)
[2025-10-13 07:30:07] 2025-10-13 11:29:13,554 | INFO     | time since job start (3984s) is within the limit (172800.0s)
[2025-10-13 07:30:07] 2025-10-13 11:29:13,560 | INFO     | monitor loop #254: job 0:6842808747 is in state 'finished'
[2025-10-13 07:30:07] 2025-10-13 11:29:13,560 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 07:30:07] 2025-10-13 11:29:15,561 | INFO     | time since job start (3986s) is within the limit (172800.0s)
[2025-10-13 07:30:07] 2025-10-13 11:29:16,065 | INFO     | monitor loop #255: job 0:6842808747 is in state 'finished'
[2025-10-13 07:30:07] 2025-10-13 11:29:16,065 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 07:30:07] 2025-10-13 11:29:18,631 | INFO     | monitor loop #256: job 0:6842808747 is in state 'finished'
[2025-10-13 07:30:07] 2025-10-13 11:29:18,631 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 07:30:07] 2025-10-13 11:29:18,919 | INFO     | PID=3802299 has CPU usage=9.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 07:30:07] 2025-10-13 11:29:18,919 | INFO     | .. there are 55 such processes running
[2025-10-13 07:30:07] 2025-10-13 11:29:19,920 | INFO     | time since job start (3990s) is within the limit (172800.0s)
[2025-10-13 07:30:07] 2025-10-13 11:29:21,136 | INFO     | monitor loop #257: job 0:6842808747 is in state 'finished'
[2025-10-13 07:30:07] 2025-10-13 11:29:21,136 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 07:30:07] 2025-10-13 11:29:21,930 | INFO     | time since job start (3992s) is within the limit (172800.0s)
[2025-10-13 07:30:07] 2025-10-13 11:29:23,652 | INFO     | monitor loop #258: job 0:6842808747 is in state 'finished'
[2025-10-13 07:30:07] 2025-10-13 11:29:23,652 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 07:30:07] 2025-10-13 11:29:23,937 | INFO     | time since job start (3994s) is within the limit (172800.0s)
[2025-10-13 07:30:07] 2025-10-13 11:29:25,955 | INFO     | time since job start (3996s) is within the limit (172800.0s)
[2025-10-13 07:30:07] 2025-10-13 11:29:26,157 | INFO     | monitor loop #259: job 0:6842808747 is in state 'finished'
[2025-10-13 07:30:07] 2025-10-13 11:29:26,157 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 07:30:07] 2025-10-13 11:29:27,962 | INFO     | time since job start (3998s) is within the limit (172800.0s)
[2025-10-13 07:30:07] 2025-10-13 11:29:28,662 | INFO     | monitor loop #260: job 0:6842808747 is in state 'finished'
[2025-10-13 07:30:07] 2025-10-13 11:29:28,662 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 07:30:07] 2025-10-13 11:29:29,971 | INFO     | time since job start (4000s) is within the limit (172800.0s)
[2025-10-13 07:30:07] 2025-10-13 11:29:31,169 | INFO     | monitor loop #261: job 0:6842808747 is in state 'finished'
[2025-10-13 07:30:07] 2025-10-13 11:29:31,169 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 07:30:07] 2025-10-13 11:29:31,978 | INFO     | time since job start (4002s) is within the limit (172800.0s)
[2025-10-13 07:30:07] 2025-10-13 11:29:32,070 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-13 07:30:07] 2025-10-13 11:29:32,079 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3766.6301796875005
[2025-10-13 07:30:07] 2025-10-13 11:29:32,103 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6842808747/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 07:30:07] 2025-10-13 11:29:32,104 | INFO     | extracted standard info from prmon json
[2025-10-13 07:30:07] 2025-10-13 11:29:32,104 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 07:30:07] 2025-10-13 11:29:32,104 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 07:30:07] 2025-10-13 11:29:32,104 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 07:30:07] 2025-10-13 11:29:32,104 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 07:30:07] 2025-10-13 11:29:32,110 | INFO     | fitting pss+swap vs Time
[2025-10-13 07:30:07] 2025-10-13 11:29:32,110 | INFO     | sum of square deviations: 60487823.65517241
[2025-10-13 07:30:07] 2025-10-13 11:29:32,110 | INFO     | sum of deviations: -3080532699.482759
[2025-10-13 07:30:07] 2025-10-13 11:29:32,110 | INFO     | mean x: 1760353040.6206896
[2025-10-13 07:30:07] 2025-10-13 11:29:32,110 | INFO     | mean y: 2533141.5689655175
[2025-10-13 07:30:07] 2025-10-13 11:29:32,110 | INFO     | -- intersect: 89654049373.6664
[2025-10-13 07:30:07] 2025-10-13 11:29:32,110 | INFO     | intersect: 89654049373.6664
[2025-10-13 07:30:07] 2025-10-13 11:29:32,110 | INFO     | chi2: 0.011869448278075784
[2025-10-13 07:30:07] 2025-10-13 11:29:32,110 | INFO     | -- intersect: 89654049373.6664
[2025-10-13 07:30:07] 2025-10-13 11:29:32,110 | INFO     | current memory leak: -50.93 B/s (using 58 data points, chi2=0.01)
[2025-10-13 07:30:07] 2025-10-13 11:29:32,115 | INFO     | could have reported an average CPU frequency of 3764 MHz (6 samples)
[2025-10-13 07:30:07] 2025-10-13 11:29:32,115 | INFO     | ..............................
[2025-10-13 07:30:07] 2025-10-13 11:29:32,115 | INFO     | . Timing measurements:
[2025-10-13 07:30:07] 2025-10-13 11:29:32,115 | INFO     | . get job = 0 s
[2025-10-13 07:30:07] 2025-10-13 11:29:32,115 | INFO     | . initial setup = 2 s
[2025-10-13 07:30:07] 2025-10-13 11:29:32,115 | INFO     | . payload setup = 6 s
[2025-10-13 07:30:07] 2025-10-13 11:29:32,115 | INFO     | . stage-in = 0 s
[2025-10-13 07:30:07] 2025-10-13 11:29:32,115 | INFO     | . payload execution = 3936 s
[2025-10-13 07:30:07] 2025-10-13 11:29:32,115 | INFO     | . stage-out = 3 s
[2025-10-13 07:30:07] 2025-10-13 11:29:32,115 | INFO     | . log creation = 0 s
[2025-10-13 07:30:07] 2025-10-13 11:29:32,115 | INFO     | ..............................
[2025-10-13 07:30:07] 2025-10-13 11:29:32,227 | INFO     | 
[2025-10-13 07:30:07] 2025-10-13 11:29:32,227 | INFO     | job summary report
[2025-10-13 07:30:07] 2025-10-13 11:29:32,227 | INFO     | --------------------------------------------------
[2025-10-13 07:30:07] 2025-10-13 11:29:32,227 | INFO     | PanDA job id: 6842808747
[2025-10-13 07:30:07] 2025-10-13 11:29:32,228 | INFO     | task id: 46676269
[2025-10-13 07:30:07] 2025-10-13 11:29:32,228 | INFO     | errors: (none)
[2025-10-13 07:30:07] 2025-10-13 11:29:32,228 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 07:30:07] 2025-10-13 11:29:32,228 | INFO     | pilot state: finished 
[2025-10-13 07:30:07] 2025-10-13 11:29:32,228 | INFO     | transexitcode: 0
[2025-10-13 07:30:07] 2025-10-13 11:29:32,228 | INFO     | exeerrorcode: 0
[2025-10-13 07:30:07] 2025-10-13 11:29:32,228 | INFO     | exeerrordiag: 
[2025-10-13 07:30:07] 2025-10-13 11:29:32,228 | INFO     | exitcode: 0
[2025-10-13 07:30:07] 2025-10-13 11:29:32,228 | INFO     | exitmsg: OK
[2025-10-13 07:30:07] 2025-10-13 11:29:32,228 | INFO     | cpuconsumptiontime: 23770 s
[2025-10-13 07:30:07] 2025-10-13 11:29:32,228 | INFO     | nevents: 400
[2025-10-13 07:30:07] 2025-10-13 11:29:32,228 | INFO     | neventsw: 0
[2025-10-13 07:30:07] 2025-10-13 11:29:32,228 | INFO     | pid: 3815685
[2025-10-13 07:30:07] 2025-10-13 11:29:32,228 | INFO     | pgrp: 3815685
[2025-10-13 07:30:07] 2025-10-13 11:29:32,228 | INFO     | corecount: 11
[2025-10-13 07:30:07] 2025-10-13 11:29:32,228 | INFO     | event service: False
[2025-10-13 07:30:07] 2025-10-13 11:29:32,228 | INFO     | sizes: {0: 2348856, 5: 2349118, 11: 2349174, 3948: 2375189, 3952: 2384187, 3956: 2384243, 3987: 2384565}
[2025-10-13 07:30:07] 2025-10-13 11:29:32,228 | INFO     | --------------------------------------------------
[2025-10-13 07:30:07] 2025-10-13 11:29:32,228 | INFO     | 
[2025-10-13 07:30:07] 2025-10-13 11:29:32,228 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-13 07:30:07] 2025-10-13 11:29:32,376 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 07:30:07] 2025-10-13 11:29:32,377 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 07:30:07] 2025-10-13 11:29:32,377 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 07:30:07] 2025-10-13 11:29:32,377 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 07:30:07] 2025-10-13 11:29:32,377 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 07:30:07] 2025-10-13 11:29:32,377 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 07:30:07] 2025-10-13 11:29:32,377 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 07:30:07] 2025-10-13 11:29:32,377 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 07:30:07] 2025-10-13 11:29:32,377 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 07:30:07] 2025-10-13 11:29:32,377 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 07:30:07] 2025-10-13 11:29:32,377 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 07:30:07] 2025-10-13 11:29:32,377 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 07:30:07] 2025-10-13 11:29:32,377 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 07:30:07] 2025-10-13 11:29:32,377 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 07:30:07] 2025-10-13 11:29:32,377 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 07:30:07] 2025-10-13 11:29:32,377 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 07:30:07] 2025-10-13 11:29:32,377 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 07:30:07] 2025-10-13 11:29:32,377 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 07:30:07] 2025-10-13 11:29:32,377 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 07:30:07] 2025-10-13 11:29:32,377 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 07:30:07] 2025-10-13 11:29:32,378 | INFO     | job 6842808747 has completed (purged errors)
[2025-10-13 07:30:07] 2025-10-13 11:29:32,378 | INFO     | overall cleanup function is called
[2025-10-13 07:30:07] 2025-10-13 11:29:33,385 | INFO     | --- collectZombieJob: --- 10, [3815685]
[2025-10-13 07:30:07] 2025-10-13 11:29:33,385 | INFO     | zombie collector waiting for pid 3815685
[2025-10-13 07:30:07] 2025-10-13 11:29:33,385 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 07:30:07] 2025-10-13 11:29:33,385 | INFO     | collected zombie processes
[2025-10-13 07:30:07] 2025-10-13 11:29:33,385 | INFO     | will attempt to kill all subprocesses of pid=3815685
[2025-10-13 07:30:07] 2025-10-13 11:29:35,244 | INFO     | process IDs to be killed: [3815685] (in reverse order)
[2025-10-13 07:30:07] 2025-10-13 11:29:35,513 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 07:30:07] 2025-10-13 11:29:35,513 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 07:30:07] 2025-10-13 11:29:35,629 | INFO     | did not find any defunct processes belonging to 3815685
[2025-10-13 07:30:07] 2025-10-13 11:29:35,764 | INFO     | did not find any defunct processes belonging to 3815685
[2025-10-13 07:30:07] 2025-10-13 11:29:35,774 | INFO     | ready for new job
[2025-10-13 07:30:07] 2025-10-13 11:29:35,774 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 07:30:07] 2025-10-13 11:29:35,797 | INFO     | ***************************************
[2025-10-13 07:30:07] 2025-10-13 11:29:35,797 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 07:30:07] 2025-10-13 11:29:35,797 | INFO     | ***************************************
[2025-10-13 07:30:07] 2025-10-13 11:29:35,797 | INFO     | 
[2025-10-13 07:30:07] 2025-10-13 11:29:35,838 | INFO     | architecture information:
[2025-10-13 07:30:07] 2025-10-13 11:29:35,863 | INFO     | executing command: cat /etc/os-release
[2025-10-13 07:30:07] 2025-10-13 11:29:35,958 | INFO     | cat /etc/os-release:
[2025-10-13 07:30:07] NAME="CentOS Linux"
[2025-10-13 07:30:07] VERSION="7 (Core)"
[2025-10-13 07:30:07] ID="centos"
[2025-10-13 07:30:07] ID_LIKE="rhel fedora"
[2025-10-13 07:30:07] VERSION_ID="7"
[2025-10-13 07:30:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 07:30:07] ANSI_COLOR="0;31"
[2025-10-13 07:30:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 07:30:07] HOME_URL="https://www.centos.org/"
[2025-10-13 07:30:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 07:30:07] 
[2025-10-13 07:30:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 07:30:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 07:30:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 07:30:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 07:30:07] 
[2025-10-13 07:30:07] 2025-10-13 11:29:35,958 | INFO     | ***************************************
[2025-10-13 07:30:07] 2025-10-13 11:29:36,462 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-13 07:30:07] 2025-10-13 11:29:36,519 | INFO     | sufficient remaining disk space (171651891200 B)
[2025-10-13 07:30:07] 2025-10-13 11:29:36,519 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 07:30:07] 2025-10-13 11:29:36,520 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 07:30:07] 2025-10-13 11:29:36,520 | INFO     | update_server=False
[2025-10-13 07:30:07] 2025-10-13 11:29:36,520 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 07:30:07] 2025-10-13 11:29:37,216 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:30:07] 2025-10-13 11:29:37,216 | INFO     | aborting loop
[2025-10-13 07:30:07] 2025-10-13 11:29:37,254 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:30:07] 2025-10-13 11:29:37,408 | INFO     | all data control threads have been joined
[2025-10-13 07:30:07] 2025-10-13 11:29:37,525 | INFO     | [job] retrieve thread has finished
[2025-10-13 07:30:07] 2025-10-13 11:29:37,604 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 07:30:07] 2025-10-13 11:29:37,615 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 07:30:07] 2025-10-13 11:29:37,618 | INFO     | all job control threads have been joined
[2025-10-13 07:30:07] 2025-10-13 11:29:37,832 | INFO     | [payload] validate_post thread has finished
[2025-10-13 07:30:07] 2025-10-13 11:29:37,838 | INFO     | [payload] failed_post thread has finished
[2025-10-13 07:30:07] 2025-10-13 11:29:37,853 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 07:30:07] 2025-10-13 11:29:38,014 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 07:30:07] 2025-10-13 11:29:38,030 | INFO     | all payload control threads have been joined
[2025-10-13 07:30:07] 2025-10-13 11:29:38,192 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 07:30:07] 2025-10-13 11:29:38,222 | INFO     | [job] job monitor thread has finished
[2025-10-13 07:30:07] 2025-10-13 11:29:38,260 | INFO     | [job] queue monitor thread has finished
[2025-10-13 07:30:07] 2025-10-13 11:29:38,319 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 07:30:07] 2025-10-13 11:29:38,414 | INFO     | [data] control thread has finished
[2025-10-13 07:30:07] 2025-10-13 11:29:38,566 | INFO     | [job] validate thread has finished
[2025-10-13 07:30:07] 2025-10-13 11:29:38,624 | INFO     | [job] control thread has finished
[2025-10-13 07:30:07] 2025-10-13 11:29:38,993 | INFO     | [data] copytool_in thread has finished
[2025-10-13 07:30:07] 2025-10-13 11:29:39,036 | INFO     | [payload] control thread has finished
[2025-10-13 07:30:07] 2025-10-13 11:29:39,617 | INFO     | [data] copytool_out thread has finished
[2025-10-13 07:30:07] 2025-10-13 11:29:42,213 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 07:30:07] 2025-10-13 11:29:56,355 | INFO     | [monitor] cgroup control has ended
[2025-10-13 07:30:07] 2025-10-13 11:29:58,135 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139714344245056)>', '<ExcThread(monitor, started 139713851672320)>']
[2025-10-13 07:30:07] 2025-10-13 11:30:03,162 | INFO     | all workflow threads have been joined
[2025-10-13 07:30:07] 2025-10-13 11:30:03,162 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 07:30:07] 2025-10-13 11:30:03,162 | INFO     | traces error code: 0
[2025-10-13 07:30:07] 2025-10-13 11:30:03,162 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 07:30:07] 2025-10-13 11:30:06,223 | INFO     | PID=3802299 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 07:30:07] 2025-10-13 11:30:06,224 | INFO     | .. there are 55 such processes running
[2025-10-13 07:30:07] 2025-10-13 11:30:06,224 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 07:30:07] 2025-10-13 11:30:06,224 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 07:30:07] 2025-10-13 11:30:06,224 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 07:30:07] 2025-10-13 11:30:06,224 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 07:30:07] 2025-10-13 11:30:06,224 | INFO     | [monitor] control thread has ended
[2025-10-13 07:30:07] 2025-10-13 11:30:06,334 [wrapper] ==== pilot stdout END ====
[2025-10-13 07:30:07] 2025-10-13 11:30:06,336 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 07:30:07] 2025-10-13 11:30:06,337 [wrapper] pilotpid: 3802299
[2025-10-13 07:30:07] 2025-10-13 11:30:06,339 [wrapper] Pilot exit status: 0
[2025-10-13 07:30:07] 2025-10-13 11:30:06,429 [wrapper] pandaids: 6842808747
[2025-10-13 07:30:07] 2025-10-13 11:30:06,613 [wrapper] cleanup supervisor_pilot  309253 3802300
[2025-10-13 07:30:07] 2025-10-13 11:30:06,640 [wrapper] Test setup, not cleaning
[2025-10-13 07:30:07] 2025-10-13 11:30:06,663 [wrapper] apfmon messages muted
[2025-10-13 07:30:07] 2025-10-13 11:30:06,682 [wrapper] ==== wrapper stdout END ====
[2025-10-13 07:30:07] 2025-10-13 11:30:06,697 [wrapper] ==== wrapper stderr END ====
[2025-10-13 07:30:07]  *** Error codes and diagnostics ***
[2025-10-13 07:30:07]     "exeErrorCode": 0,
[2025-10-13 07:30:07]     "exeErrorDiag": "",
[2025-10-13 07:30:07]     "pilotErrorCode": 0,
[2025-10-13 07:30:07]     "pilotErrorDiag": "",
[2025-10-13 07:30:07]  *** Listing of results directory ***
[2025-10-13 07:30:07] total 419088
[2025-10-13 07:30:07] -rw-r--r--. 1 boincer umatlas    557409 Oct 13 05:31 pilot3.tar.gz
[2025-10-13 07:30:07] -rw-r--r--. 1 boincer umatlas      5112 Oct 13 06:20 queuedata.json
[2025-10-13 07:30:07] -rwx------. 1 boincer umatlas     36292 Oct 13 06:22 runpilot2-wrapper.sh
[2025-10-13 07:30:07] -rw-r--r--. 1 boincer umatlas       100 Oct 13 06:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 07:30:07] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 06:22 run_atlas
[2025-10-13 07:30:07] -rw-r--r--. 1 boincer umatlas       105 Oct 13 06:22 job.xml
[2025-10-13 07:30:07] -rw-r--r--. 2 boincer umatlas 221632077 Oct 13 06:22 EVNT.46676267._003137.pool.root.1
[2025-10-13 07:30:07] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 06:22 shared
[2025-10-13 07:30:07] -rw-r--r--. 2 boincer umatlas    569685 Oct 13 06:22 input.tar.gz
[2025-10-13 07:30:07] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 06:22 start_atlas.sh
[2025-10-13 07:30:07] -rw-r--r--. 1 boincer umatlas         0 Oct 13 06:22 boinc_lockfile
[2025-10-13 07:30:07] -rw-r--r--. 1 boincer umatlas      2549 Oct 13 06:22 pandaJob.out
[2025-10-13 07:30:07] -rw-------. 1 boincer umatlas    972497 Oct 13 06:22 agis_schedconf.cvmfs.json
[2025-10-13 07:30:07] -rw-------. 1 boincer umatlas   1560580 Oct 13 06:22 agis_ddmendpoints.agis.ALL.json
[2025-10-13 07:30:07] drwx------. 5 boincer umatlas      4096 Oct 13 06:22 pilot3
[2025-10-13 07:30:07] -rw-r--r--. 1 boincer umatlas      7162 Oct 13 07:19 init_data.xml
[2025-10-13 07:30:07] -rw-------. 1 boincer umatlas 201796296 Oct 13 07:27 HITS.46676269._096662.pool.root.1
[2025-10-13 07:30:07] -rw-r--r--. 1 boincer umatlas       529 Oct 13 07:28 boinc_task_state.xml
[2025-10-13 07:30:07] -rw-------. 1 boincer umatlas      1046 Oct 13 07:28 memory_monitor_summary.json
[2025-10-13 07:30:07] -rw-------. 1 boincer umatlas    351477 Oct 13 07:28 log.46676269._096662.job.log.tgz.1
[2025-10-13 07:30:07] -rw-------. 1 boincer umatlas      7798 Oct 13 07:29 heartbeat.json
[2025-10-13 07:30:07] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 07:30 boinc_mmap_file
[2025-10-13 07:30:07] -rw-r--r--. 1 boincer umatlas        27 Oct 13 07:30 wrapper_checkpoint.txt
[2025-10-13 07:30:07] -rw-------. 1 boincer umatlas       823 Oct 13 07:30 pilotlog.txt
[2025-10-13 07:30:07] -rw-------. 1 boincer umatlas        95 Oct 13 07:30 pilot_heartbeat.json
[2025-10-13 07:30:07] -rw-------. 1 boincer umatlas    556438 Oct 13 07:30 log.46676269._096662.job.log.1
[2025-10-13 07:30:07] -rw-------. 1 boincer umatlas       357 Oct 13 07:30 output.list
[2025-10-13 07:30:07] -rw-r--r--. 1 boincer umatlas       620 Oct 13 07:30 runtime_log
[2025-10-13 07:30:07] -rw-------. 1 boincer umatlas    931840 Oct 13 07:30 result.tar.gz
[2025-10-13 07:30:07] -rw-r--r--. 1 boincer umatlas      8695 Oct 13 07:30 runtime_log.err
[2025-10-13 07:30:07] -rw-------. 1 boincer umatlas       655 Oct 13 07:30 hMiLDm6rUS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmjjVMDmkiXODm.diag
[2025-10-13 07:30:07] -rw-r--r--. 1 boincer umatlas     22327 Oct 13 07:30 stderr.txt
[2025-10-13 07:30:07] HITS file was successfully produced:
[2025-10-13 07:30:07] -rw-------. 1 boincer umatlas 201796296 Oct 13 07:27 shared/HITS.pool.root.1
[2025-10-13 07:30:07]  *** Contents of shared directory: ***
[2025-10-13 07:30:07] total 415004
[2025-10-13 07:30:07] -rw-r--r--. 2 boincer umatlas 221632077 Oct 13 06:22 ATLAS.root_0
[2025-10-13 07:30:07] -rw-r--r--. 2 boincer umatlas    569685 Oct 13 06:22 input.tar.gz
[2025-10-13 07:30:07] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 06:22 start_atlas.sh
[2025-10-13 07:30:07] -rw-------. 1 boincer umatlas 201796296 Oct 13 07:27 HITS.pool.root.1
[2025-10-13 07:30:07] -rw-------. 1 boincer umatlas    931840 Oct 13 07:30 result.tar.gz
07:30:08 (3788456): run_atlas exited; CPU time 23875.595352
07:30:08 (3788456): called boinc_finish(0)

</stderr_txt>
]]>

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