Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:19:38 (23839): wrapper (7.7.26015): starting
06:19:38 (23839): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 06:19:38] Arguments: --nthreads 8
[2025-10-13 06:19:38] Threads: 8
[2025-10-13 06:19:38] Checking for CVMFS
[2025-10-13 06:19:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 06:19:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 06:19:39] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 06:19:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 06:19:39] 2.11.2.0 2856 81230 80368 151658 1 56 15993983 20275200 1 130560 0 37698746 99.988 2561447 39977 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 06:19:39] CVMFS is ok
[2025-10-13 06:19:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 06:19:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 06:19:39] Further information can be found at the LHC@home message board.
[2025-10-13 06:19:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 06:19:39] Checking for apptainer binary...
[2025-10-13 06:19:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 06:19:39] Running /usr/bin/apptainer --version
[2025-10-13 06:19:39] apptainer version 1.3.2-1.el7
[2025-10-13 06:19:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 06:19:40] c-115-6.aglt2.org
[2025-10-13 06:19:40] apptainer works
[2025-10-13 06:19:40] Set ATHENA_PROC_NUMBER=8
[2025-10-13 06:19:40] Set ATHENA_CORE_NUMBER=8
[2025-10-13 06:19:40] Starting ATLAS job with PandaID=6842805982
[2025-10-13 06:19:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 08:10:13]  *** The last 200 lines of the pilot log: ***
[2025-10-13 08:10:13] 2025-10-13 12:09:28,669 | INFO     | fitting pss+swap vs Time
[2025-10-13 08:10:13] 2025-10-13 12:09:28,669 | INFO     | sum of square deviations: 390582207.0
[2025-10-13 08:10:13] 2025-10-13 12:09:28,670 | INFO     | sum of deviations: -12295436299.499998
[2025-10-13 08:10:13] 2025-10-13 12:09:28,670 | INFO     | mean x: 1760354091.5
[2025-10-13 08:10:13] 2025-10-13 12:09:28,670 | INFO     | mean y: 2596653.4907407407
[2025-10-13 08:10:13] 2025-10-13 12:09:28,670 | INFO     | -- intersect: 55418130716.98288
[2025-10-13 08:10:13] 2025-10-13 12:09:28,670 | INFO     | intersect: 55418130716.98288
[2025-10-13 08:10:13] 2025-10-13 12:09:28,670 | INFO     | chi2: 2.2920891170915496
[2025-10-13 08:10:13] 2025-10-13 12:09:28,671 | INFO     | sum of square deviations: 338804492.0
[2025-10-13 08:10:13] 2025-10-13 12:09:28,671 | INFO     | sum of deviations: -3888982471.000001
[2025-10-13 08:10:13] 2025-10-13 12:09:28,671 | INFO     | mean x: 1760353939.0
[2025-10-13 08:10:13] 2025-10-13 12:09:28,672 | INFO     | mean y: 2620616.145631068
[2025-10-13 08:10:13] 2025-10-13 12:09:28,672 | INFO     | -- intersect: 20208921811.015278
[2025-10-13 08:10:13] 2025-10-13 12:09:28,672 | INFO     | intersect: 20208921811.015278
[2025-10-13 08:10:13] 2025-10-13 12:09:28,672 | INFO     | chi2: 1.5280443675690187
[2025-10-13 08:10:13] 2025-10-13 12:09:28,672 | INFO     | current chi2=1.5280443675690187 (change=33.33398967017624 %)
[2025-10-13 08:10:13] 2025-10-13 12:09:28,672 | INFO     | sum of square deviations: 291817564.5
[2025-10-13 08:10:13] 2025-10-13 12:09:28,673 | INFO     | sum of deviations: -2841675575.5000024
[2025-10-13 08:10:13] 2025-10-13 12:09:28,673 | INFO     | mean x: 1760353786.5
[2025-10-13 08:10:13] 2025-10-13 12:09:28,673 | INFO     | mean y: 2624020.2346938774
[2025-10-13 08:10:13] 2025-10-13 12:09:28,673 | INFO     | -- intersect: 17144684567.230986
[2025-10-13 08:10:13] 2025-10-13 12:09:28,673 | INFO     | intersect: 17144684567.230986
[2025-10-13 08:10:13] 2025-10-13 12:09:28,674 | INFO     | chi2: 1.530526867089132
[2025-10-13 08:10:13] 2025-10-13 12:09:28,674 | INFO     | current chi2=1.530526867089132 (change=-0.1624625287590832 %)
[2025-10-13 08:10:13] 2025-10-13 12:09:28,674 | INFO     | right removable region: 97
[2025-10-13 08:10:13] 2025-10-13 12:09:28,674 | INFO     | sum of square deviations: 338804492.0
[2025-10-13 08:10:13] 2025-10-13 12:09:28,675 | INFO     | sum of deviations: -28045149306.0
[2025-10-13 08:10:13] 2025-10-13 12:09:28,675 | INFO     | mean x: 1760354244.0
[2025-10-13 08:10:13] 2025-10-13 12:09:28,675 | INFO     | mean y: 2642038.349514563
[2025-10-13 08:10:13] 2025-10-13 12:09:28,675 | INFO     | -- intersect: 145719120922.6695
[2025-10-13 08:10:13] 2025-10-13 12:09:28,675 | INFO     | intersect: 145719120922.6695
[2025-10-13 08:10:13] 2025-10-13 12:09:28,675 | INFO     | chi2: 0.8933709485114015
[2025-10-13 08:10:13] 2025-10-13 12:09:28,675 | INFO     | current chi2=0.8933709485114015 (change=61.02372539314671 %)
[2025-10-13 08:10:13] 2025-10-13 12:09:28,676 | INFO     | sum of square deviations: 291817564.5
[2025-10-13 08:10:13] 2025-10-13 12:09:28,676 | INFO     | sum of deviations: -26075311960.5
[2025-10-13 08:10:13] 2025-10-13 12:09:28,676 | INFO     | mean x: 1760354396.5
[2025-10-13 08:10:13] 2025-10-13 12:09:28,676 | INFO     | mean y: 2635616.0306122447
[2025-10-13 08:10:13] 2025-10-13 12:09:28,676 | INFO     | -- intersect: 157298822116.74146
[2025-10-13 08:10:13] 2025-10-13 12:09:28,677 | INFO     | intersect: 157298822116.74146
[2025-10-13 08:10:13] 2025-10-13 12:09:28,677 | INFO     | chi2: 0.8898806501721415
[2025-10-13 08:10:13] 2025-10-13 12:09:28,677 | INFO     | current chi2=0.8898806501721415 (change=0.39068858743121787 %)
[2025-10-13 08:10:13] 2025-10-13 12:09:28,677 | INFO     | left removable region: 20
[2025-10-13 08:10:13] 2025-10-13 12:09:28,677 | INFO     | sum of square deviations: 141539398.0
[2025-10-13 08:10:13] 2025-10-13 12:09:28,678 | INFO     | sum of deviations: -12136500830.0
[2025-10-13 08:10:13] 2025-10-13 12:09:28,678 | INFO     | mean x: 1760354366.0
[2025-10-13 08:10:13] 2025-10-13 12:09:28,678 | INFO     | mean y: 2653170.4805194805
[2025-10-13 08:10:13] 2025-10-13 12:09:28,678 | INFO     | -- intersect: 150946789756.76956
[2025-10-13 08:10:13] 2025-10-13 12:09:28,678 | INFO     | intersect: 150946789756.76956
[2025-10-13 08:10:13] 2025-10-13 12:09:28,678 | INFO     | chi2: 0.06985630270220963
[2025-10-13 08:10:13] 2025-10-13 12:09:28,678 | INFO     | -- intersect: 150946789756.76956
[2025-10-13 08:10:13] 2025-10-13 12:09:28,679 | INFO     | current memory leak: -85.75 B/s (using 77 data points, chi2=0.07)
[2025-10-13 08:10:13] 2025-10-13 12:09:28,679 | INFO     | could have reported an average CPU frequency of 2076 MHz (7 samples)
[2025-10-13 08:10:13] 2025-10-13 12:09:28,679 | INFO     | ..............................
[2025-10-13 08:10:13] 2025-10-13 12:09:28,679 | INFO     | . Timing measurements:
[2025-10-13 08:10:13] 2025-10-13 12:09:28,679 | INFO     | . get job = 0 s
[2025-10-13 08:10:13] 2025-10-13 12:09:28,679 | INFO     | . initial setup = 2 s
[2025-10-13 08:10:13] 2025-10-13 12:09:28,680 | INFO     | . payload setup = 7 s
[2025-10-13 08:10:13] 2025-10-13 12:09:28,680 | INFO     | . stage-in = 0 s
[2025-10-13 08:10:13] 2025-10-13 12:09:28,680 | INFO     | . payload execution = 6535 s
[2025-10-13 08:10:13] 2025-10-13 12:09:28,680 | INFO     | . stage-out = 0 s
[2025-10-13 08:10:13] 2025-10-13 12:09:28,680 | INFO     | . log creation = 0 s
[2025-10-13 08:10:13] 2025-10-13 12:09:28,680 | INFO     | ..............................
[2025-10-13 08:10:13] 2025-10-13 12:09:28,775 | INFO     | 
[2025-10-13 08:10:13] 2025-10-13 12:09:28,775 | INFO     | job summary report
[2025-10-13 08:10:13] 2025-10-13 12:09:28,775 | INFO     | --------------------------------------------------
[2025-10-13 08:10:13] 2025-10-13 12:09:28,775 | INFO     | PanDA job id: 6842805982
[2025-10-13 08:10:13] 2025-10-13 12:09:28,775 | INFO     | task id: 46676269
[2025-10-13 08:10:13] 2025-10-13 12:09:28,775 | INFO     | errors: (none)
[2025-10-13 08:10:13] 2025-10-13 12:09:28,775 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 08:10:13] 2025-10-13 12:09:28,776 | INFO     | pilot state: finished 
[2025-10-13 08:10:13] 2025-10-13 12:09:28,776 | INFO     | transexitcode: 0
[2025-10-13 08:10:13] 2025-10-13 12:09:28,776 | INFO     | exeerrorcode: 0
[2025-10-13 08:10:13] 2025-10-13 12:09:28,776 | INFO     | exeerrordiag: 
[2025-10-13 08:10:13] 2025-10-13 12:09:28,776 | INFO     | exitcode: 0
[2025-10-13 08:10:13] 2025-10-13 12:09:28,776 | INFO     | exitmsg: OK
[2025-10-13 08:10:13] 2025-10-13 12:09:28,776 | INFO     | cpuconsumptiontime: 49223 s
[2025-10-13 08:10:13] 2025-10-13 12:09:28,776 | INFO     | nevents: 400
[2025-10-13 08:10:13] 2025-10-13 12:09:28,776 | INFO     | neventsw: 0
[2025-10-13 08:10:13] 2025-10-13 12:09:28,777 | INFO     | pid: 2654
[2025-10-13 08:10:13] 2025-10-13 12:09:28,777 | INFO     | pgrp: 2654
[2025-10-13 08:10:13] 2025-10-13 12:09:28,777 | INFO     | corecount: 8
[2025-10-13 08:10:13] 2025-10-13 12:09:28,777 | INFO     | event service: False
[2025-10-13 08:10:13] 2025-10-13 12:09:28,777 | INFO     | sizes: {0: 2348642, 1: 2348784, 6: 2349046, 11: 2349074, 6547: 2376130, 6548: 2385312, 6554: 2385450}
[2025-10-13 08:10:13] 2025-10-13 12:09:28,777 | INFO     | --------------------------------------------------
[2025-10-13 08:10:13] 2025-10-13 12:09:28,777 | INFO     | 
[2025-10-13 08:10:13] 2025-10-13 12:09:28,777 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 08:10:13] 2025-10-13 12:09:28,806 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 08:10:13] 2025-10-13 12:09:28,806 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 08:10:13] 2025-10-13 12:09:28,806 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 08:10:13] 2025-10-13 12:09:28,806 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 08:10:13] 2025-10-13 12:09:28,807 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 08:10:13] 2025-10-13 12:09:28,807 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 08:10:13] 2025-10-13 12:09:28,807 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 08:10:13] 2025-10-13 12:09:28,807 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 08:10:13] 2025-10-13 12:09:28,807 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 08:10:13] 2025-10-13 12:09:28,807 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 08:10:13] 2025-10-13 12:09:28,808 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 08:10:13] 2025-10-13 12:09:28,808 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 08:10:13] 2025-10-13 12:09:28,808 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 08:10:13] 2025-10-13 12:09:28,808 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 08:10:13] 2025-10-13 12:09:28,808 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 08:10:13] 2025-10-13 12:09:28,809 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 08:10:13] 2025-10-13 12:09:28,809 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 08:10:13] 2025-10-13 12:09:28,809 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 08:10:13] 2025-10-13 12:09:28,809 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 08:10:13] 2025-10-13 12:09:28,809 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 08:10:13] 2025-10-13 12:09:28,810 | INFO     | job 6842805982 has completed (purged errors)
[2025-10-13 08:10:13] 2025-10-13 12:09:28,810 | INFO     | overall cleanup function is called
[2025-10-13 08:10:13] 2025-10-13 12:09:29,818 | INFO     | --- collectZombieJob: --- 10, [2654]
[2025-10-13 08:10:13] 2025-10-13 12:09:29,818 | INFO     | zombie collector waiting for pid 2654
[2025-10-13 08:10:13] 2025-10-13 12:09:29,819 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 08:10:13] 2025-10-13 12:09:29,819 | INFO     | collected zombie processes
[2025-10-13 08:10:13] 2025-10-13 12:09:29,819 | INFO     | will attempt to kill all subprocesses of pid=2654
[2025-10-13 08:10:13] 2025-10-13 12:09:29,907 | INFO     | process IDs to be killed: [2654] (in reverse order)
[2025-10-13 08:10:13] 2025-10-13 12:09:29,967 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 08:10:13] 2025-10-13 12:09:29,967 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 08:10:13] 2025-10-13 12:09:29,972 | INFO     | did not find any defunct processes belonging to 2654
[2025-10-13 08:10:13] 2025-10-13 12:09:29,975 | INFO     | did not find any defunct processes belonging to 2654
[2025-10-13 08:10:13] 2025-10-13 12:09:29,975 | INFO     | ready for new job
[2025-10-13 08:10:13] 2025-10-13 12:09:29,975 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 08:10:13] 2025-10-13 12:09:29,978 | INFO     | ***************************************
[2025-10-13 08:10:13] 2025-10-13 12:09:29,978 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 08:10:13] 2025-10-13 12:09:29,978 | INFO     | ***************************************
[2025-10-13 08:10:13] 2025-10-13 12:09:29,978 | INFO     | 
[2025-10-13 08:10:13] 2025-10-13 12:09:29,979 | INFO     | architecture information:
[2025-10-13 08:10:13] 2025-10-13 12:09:29,979 | INFO     | executing command: cat /etc/os-release
[2025-10-13 08:10:13] 2025-10-13 12:09:29,998 | INFO     | cat /etc/os-release:
[2025-10-13 08:10:13] NAME="CentOS Linux"
[2025-10-13 08:10:13] VERSION="7 (Core)"
[2025-10-13 08:10:13] ID="centos"
[2025-10-13 08:10:13] ID_LIKE="rhel fedora"
[2025-10-13 08:10:13] VERSION_ID="7"
[2025-10-13 08:10:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 08:10:13] ANSI_COLOR="0;31"
[2025-10-13 08:10:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 08:10:13] HOME_URL="https://www.centos.org/"
[2025-10-13 08:10:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 08:10:13] 
[2025-10-13 08:10:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 08:10:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 08:10:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 08:10:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 08:10:13] 
[2025-10-13 08:10:13] 2025-10-13 12:09:29,998 | INFO     | ***************************************
[2025-10-13 08:10:13] 2025-10-13 12:09:30,501 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 08:10:13] 2025-10-13 12:09:30,521 | INFO     | sufficient remaining disk space (18594398208 B)
[2025-10-13 08:10:13] 2025-10-13 12:09:30,522 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 08:10:13] 2025-10-13 12:09:30,522 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 08:10:13] 2025-10-13 12:09:30,522 | INFO     | update_server=False
[2025-10-13 08:10:13] 2025-10-13 12:09:30,523 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 08:10:13] 2025-10-13 12:09:30,523 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 08:10:13] 2025-10-13 12:09:30,880 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 08:10:13] 2025-10-13 12:09:30,881 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 08:10:13] 2025-10-13 12:09:30,882 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 08:10:13] 2025-10-13 12:09:30,882 | INFO     | will abort loop
[2025-10-13 08:10:13] 2025-10-13 12:09:31,059 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 08:10:13] 2025-10-13 12:09:31,209 | INFO     | all job control threads have been joined
[2025-10-13 08:10:13] 2025-10-13 12:09:31,391 | INFO     | all data control threads have been joined
[2025-10-13 08:10:13] 2025-10-13 12:09:31,423 | INFO     | all payload control threads have been joined
[2025-10-13 08:10:13] 2025-10-13 12:09:31,528 | INFO     | [job] retrieve thread has finished
[2025-10-13 08:10:13] 2025-10-13 12:09:31,529 | INFO     | [job] queue monitor thread has finished
[2025-10-13 08:10:13] 2025-10-13 12:09:31,538 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 08:10:13] 2025-10-13 12:09:31,549 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 08:10:13] 2025-10-13 12:09:31,699 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 08:10:13] 2025-10-13 12:09:31,887 | INFO     | [job] job monitor thread has finished
[2025-10-13 08:10:13] 2025-10-13 12:09:32,215 | INFO     | [job] control thread has finished
[2025-10-13 08:10:13] 2025-10-13 12:09:32,384 | INFO     | [payload] validate_post thread has finished
[2025-10-13 08:10:13] 2025-10-13 12:09:32,396 | INFO     | [data] control thread has finished
[2025-10-13 08:10:13] 2025-10-13 12:09:32,429 | INFO     | [payload] control thread has finished
[2025-10-13 08:10:13] 2025-10-13 12:09:32,491 | INFO     | [payload] failed_post thread has finished
[2025-10-13 08:10:13] 2025-10-13 12:09:32,681 | INFO     | [job] validate thread has finished
[2025-10-13 08:10:13] 2025-10-13 12:09:32,702 | INFO     | [data] copytool_in thread has finished
[2025-10-13 08:10:13] 2025-10-13 12:09:33,065 | INFO     | [data] copytool_out thread has finished
[2025-10-13 08:10:13] 2025-10-13 12:09:33,665 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 08:10:13] 2025-10-13 12:09:37,671 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 08:10:13] 2025-10-13 12:09:40,893 | INFO     | job.realtimelogging is not enabled
[2025-10-13 08:10:13] 2025-10-13 12:09:41,899 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 08:10:13] 2025-10-13 12:09:59,524 | INFO     | 6574s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-13 08:10:13] 2025-10-13 12:10:00,648 | INFO     | PID=27594 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 08:10:13] 2025-10-13 12:10:00,648 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 08:10:13] 2025-10-13 12:10:00,648 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 08:10:13] 2025-10-13 12:10:00,648 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 08:10:13] 2025-10-13 12:10:08,073 | INFO     | [monitor] cgroup control has ended
[2025-10-13 08:10:13] 2025-10-13 12:10:08,474 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140615791523648)>', '<ExcThread(monitor, started 140615031428864)>']
[2025-10-13 08:10:13] 2025-10-13 12:10:08,677 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 08:10:13] 2025-10-13 12:10:08,678 | INFO     | [monitor] control thread has ended
[2025-10-13 08:10:13] 2025-10-13 12:10:13,500 | INFO     | all workflow threads have been joined
[2025-10-13 08:10:13] 2025-10-13 12:10:13,502 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 08:10:13] 2025-10-13 12:10:13,503 | INFO     | traces error code: 0
[2025-10-13 08:10:13] 2025-10-13 12:10:13,504 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 08:10:13] 2025-10-13 12:10:13,629 [wrapper] ==== pilot stdout END ====
[2025-10-13 08:10:13] 2025-10-13 12:10:13,634 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 08:10:13] 2025-10-13 12:10:13,639 [wrapper] pilotpid: 27594
[2025-10-13 08:10:13] 2025-10-13 12:10:13,643 [wrapper] Pilot exit status: 0
[2025-10-13 08:10:13] 2025-10-13 12:10:13,661 [wrapper] pandaids: 6842805982
[2025-10-13 08:10:13] 2025-10-13 12:10:13,707 [wrapper] cleanup supervisor_pilot 11795 27595
[2025-10-13 08:10:13] 2025-10-13 12:10:13,712 [wrapper] Test setup, not cleaning
[2025-10-13 08:10:13] 2025-10-13 12:10:13,717 [wrapper] apfmon messages muted
[2025-10-13 08:10:13] 2025-10-13 12:10:13,722 [wrapper] ==== wrapper stdout END ====
[2025-10-13 08:10:13] 2025-10-13 12:10:13,726 [wrapper] ==== wrapper stderr END ====
[2025-10-13 08:10:13]  *** Error codes and diagnostics ***
[2025-10-13 08:10:13]     "exeErrorCode": 0,
[2025-10-13 08:10:13]     "exeErrorDiag": "",
[2025-10-13 08:10:13]     "pilotErrorCode": 0,
[2025-10-13 08:10:13]     "pilotErrorDiag": "",
[2025-10-13 08:10:13]  *** Listing of results directory ***
[2025-10-13 08:10:13] total 411052
[2025-10-13 08:10:13] -rw-r--r-- 1 boincer umatlas    557409 Oct 13 05:31 pilot3.tar.gz
[2025-10-13 08:10:13] -rw-r--r-- 1 boincer umatlas      5112 Oct 13 06:17 queuedata.json
[2025-10-13 08:10:13] -rwx------ 1 boincer umatlas     36292 Oct 13 06:18 runpilot2-wrapper.sh
[2025-10-13 08:10:13] -rw-r--r-- 1 boincer umatlas       100 Oct 13 06:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 08:10:13] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 06:19 run_atlas
[2025-10-13 08:10:13] -rw-r--r-- 1 boincer umatlas       105 Oct 13 06:19 job.xml
[2025-10-13 08:10:13] -rw-r--r-- 2 boincer umatlas 220042116 Oct 13 06:19 EVNT.46676267._004231.pool.root.1
[2025-10-13 08:10:13] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 06:19 start_atlas.sh
[2025-10-13 08:10:13] drwxrwx--x 2 boincer umatlas      4096 Oct 13 06:19 shared
[2025-10-13 08:10:13] -rw-r--r-- 2 boincer umatlas    569688 Oct 13 06:19 input.tar.gz
[2025-10-13 08:10:13] -rw-r--r-- 1 boincer umatlas         0 Oct 13 06:19 boinc_lockfile
[2025-10-13 08:10:13] -rw-r--r-- 1 boincer umatlas      2549 Oct 13 06:19 pandaJob.out
[2025-10-13 08:10:13] -rw------- 1 boincer umatlas    972497 Oct 13 06:19 agis_schedconf.cvmfs.json
[2025-10-13 08:10:13] -rw------- 1 boincer umatlas   1560580 Oct 13 06:19 agis_ddmendpoints.agis.ALL.json
[2025-10-13 08:10:13] drwx------ 5 boincer umatlas      4096 Oct 13 06:19 pilot3
[2025-10-13 08:10:13] -rw------- 1 boincer umatlas 194372330 Oct 13 08:08 HITS.46676269._096655.pool.root.1
[2025-10-13 08:10:13] -rw-r--r-- 1 boincer umatlas       529 Oct 13 08:08 boinc_task_state.xml
[2025-10-13 08:10:13] -rw------- 1 boincer umatlas      1049 Oct 13 08:09 memory_monitor_summary.json
[2025-10-13 08:10:13] -rw------- 1 boincer umatlas    367160 Oct 13 08:09 log.46676269._096655.job.log.tgz.1
[2025-10-13 08:10:13] -rw------- 1 boincer umatlas        95 Oct 13 08:09 pilot_heartbeat.json
[2025-10-13 08:10:13] -rw------- 1 boincer umatlas      7853 Oct 13 08:09 heartbeat.json
[2025-10-13 08:10:13] -rw-r--r-- 1 boincer umatlas      5909 Oct 13 08:09 init_data.xml
[2025-10-13 08:10:13] -rw-r--r-- 1 boincer umatlas        27 Oct 13 08:09 wrapper_checkpoint.txt
[2025-10-13 08:10:13] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 08:09 boinc_mmap_file
[2025-10-13 08:10:13] -rw------- 1 boincer umatlas      5119 Oct 13 08:10 pilotlog.txt
[2025-10-13 08:10:13] -rw------- 1 boincer umatlas    931246 Oct 13 08:10 log.46676269._096655.job.log.1
[2025-10-13 08:10:13] -rw------- 1 boincer umatlas       357 Oct 13 08:10 output.list
[2025-10-13 08:10:13] -rw-r--r-- 1 boincer umatlas       620 Oct 13 08:10 runtime_log
[2025-10-13 08:10:13] -rw------- 1 boincer umatlas   1320960 Oct 13 08:10 result.tar.gz
[2025-10-13 08:10:13] -rw-r--r-- 1 boincer umatlas      8698 Oct 13 08:10 runtime_log.err
[2025-10-13 08:10:13] -rw------- 1 boincer umatlas       657 Oct 13 08:10 FhTKDm0oUS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm0kmNDmW6LG9m.diag
[2025-10-13 08:10:13] -rw-r--r-- 1 boincer umatlas     20897 Oct 13 08:10 stderr.txt
[2025-10-13 08:10:13] HITS file was successfully produced:
[2025-10-13 08:10:13] -rw------- 1 boincer umatlas 194372330 Oct 13 08:08 shared/HITS.pool.root.1
[2025-10-13 08:10:13]  *** Contents of shared directory: ***
[2025-10-13 08:10:13] total 406580
[2025-10-13 08:10:13] -rw-r--r-- 2 boincer umatlas 220042116 Oct 13 06:19 ATLAS.root_0
[2025-10-13 08:10:13] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 06:19 start_atlas.sh
[2025-10-13 08:10:13] -rw-r--r-- 2 boincer umatlas    569688 Oct 13 06:19 input.tar.gz
[2025-10-13 08:10:13] -rw------- 1 boincer umatlas 194372330 Oct 13 08:08 HITS.pool.root.1
[2025-10-13 08:10:13] -rw------- 1 boincer umatlas   1320960 Oct 13 08:10 result.tar.gz
08:10:15 (23839): run_atlas exited; CPU time 49232.340843
08:10:15 (23839): called boinc_finish(0)

</stderr_txt>
]]>

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