Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:19:28 (29467): wrapper (7.7.26015): starting
06:19:28 (29467): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 06:19:28] Arguments: --nthreads 12
[2025-10-13 06:19:28] Threads: 12
[2025-10-13 06:19:28] Checking for CVMFS
[2025-10-13 06:19:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 06:19:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 06:19:28] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 06:19:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 06:19:29] 2.11.2.0 2937 224193 101316 151658 3 1 10749511 20275200 1 130560 1 110520624 99.984 13787622 13178 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 06:19:29] CVMFS is ok
[2025-10-13 06:19:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 06:19:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 06:19:29] Further information can be found at the LHC@home message board.
[2025-10-13 06:19:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 06:19:29] Checking for apptainer binary...
[2025-10-13 06:19:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 06:19:29] Running /usr/bin/apptainer --version
[2025-10-13 06:19:29] apptainer version 1.3.2-1.el7
[2025-10-13 06:19:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 06:19:30] c-205-8.aglt2.org
[2025-10-13 06:19:30] apptainer works
[2025-10-13 06:19:30] Set ATHENA_PROC_NUMBER=12
[2025-10-13 06:19:30] Set ATHENA_CORE_NUMBER=12
[2025-10-13 06:19:30] Starting ATLAS job with PandaID=6842785217
[2025-10-13 06:19:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 07:32:58]  *** The last 200 lines of the pilot log: ***
[2025-10-13 07:32:58]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6842785217/log.46676269._096598.job.log.tgz.1
[2025-10-13 07:32:58]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/28/d8/log.46676269._096598.job.log.tgz.1
[2025-10-13 07:32:58]  workdir=None
[2025-10-13 07:32:58] ]
[2025-10-13 07:32:58] 2025-10-13 11:31:57,105 | INFO     | transferring file log.46676269._096598.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6842785217/log.46676269._096598.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-13 07:32:58] 2025-10-13 11:31:57,105 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6842785217/log.46676269._096598.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._096598.job
[2025-10-13 07:32:58] 2025-10-13 11:31:57,128 | INFO     | adding to output.list: log.46676269._096598.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/28/d8/log.46676269._096598.job.log.tg
[2025-10-13 07:32:58] 2025-10-13 11:31:57,129 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 07:32:58] 2025-10-13 11:31:57,130 | INFO     | summary of transferred files:
[2025-10-13 07:32:58] 2025-10-13 11:31:57,130 | INFO     |  -- lfn=log.46676269._096598.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 07:32:58] 2025-10-13 11:31:57,130 | INFO     | stage-out finished correctly
[2025-10-13 07:32:58] 2025-10-13 11:31:57,178 | INFO     | time since job start (4331s) is within the limit (172800.0s)
[2025-10-13 07:32:58] 2025-10-13 11:31:57,613 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 07:32:58] 2025-10-13 11:31:59,189 | INFO     | time since job start (4333s) is within the limit (172800.0s)
[2025-10-13 07:32:58] 2025-10-13 11:31:59,755 | WARNING  | process 8157 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 07:32:58] 2025-10-13 11:31:59,755 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6842785217/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 07:32:58] 2025-10-13 11:31:59,844 | INFO     | number of running child processes to parent process 8157: 1
[2025-10-13 07:32:58] 2025-10-13 11:31:59,844 | INFO     | maximum number of monitored processes: 6
[2025-10-13 07:32:58] 2025-10-13 11:32:00,115 | INFO     | job 6842785217 has state=finished
[2025-10-13 07:32:58] 2025-10-13 11:32:00,116 | INFO     | preparing for final server update for job 6842785217 in state='finished'
[2025-10-13 07:32:58] 2025-10-13 11:32:00,116 | INFO     | this job has now completed (state=finished)
[2025-10-13 07:32:58] 2025-10-13 11:32:00,116 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 07:32:58] 2025-10-13 11:32:00,117 | INFO     | log transfer has been attempted: DONE
[2025-10-13 07:32:58] 2025-10-13 11:32:00,117 | INFO     | job 6842785217 has finished - writing final server update
[2025-10-13 07:32:58] 2025-10-13 11:32:00,117 | INFO     | total number of processed events: 400 (read)
[2025-10-13 07:32:58] 2025-10-13 11:32:00,118 | INFO     | executing command: lscpu
[2025-10-13 07:32:58] 2025-10-13 11:32:00,144 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 07:32:58] 2025-10-13 11:32:01,194 | INFO     | time since job start (4335s) is within the limit (172800.0s)
[2025-10-13 07:32:58] 2025-10-13 11:32:02,347 | INFO     | monitor loop #323: job 0:6842785217 is in state 'finished'
[2025-10-13 07:32:58] 2025-10-13 11:32:02,348 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 07:32:58] 2025-10-13 11:32:03,212 | INFO     | time since job start (4337s) is within the limit (172800.0s)
[2025-10-13 07:32:58] 2025-10-13 11:32:04,838 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-13 07:32:58] 2025-10-13 11:32:04,842 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.6666666666667
[2025-10-13 07:32:58] 2025-10-13 11:32:04,844 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6842785217/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 07:32:58] 2025-10-13 11:32:04,845 | INFO     | extracted standard info from prmon json
[2025-10-13 07:32:58] 2025-10-13 11:32:04,846 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 07:32:58] 2025-10-13 11:32:04,846 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 07:32:58] 2025-10-13 11:32:04,846 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 07:32:58] 2025-10-13 11:32:04,846 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 07:32:58] 2025-10-13 11:32:04,849 | INFO     | fitting pss+swap vs Time
[2025-10-13 07:32:58] 2025-10-13 11:32:04,849 | INFO     | sum of square deviations: 81266640.0
[2025-10-13 07:32:58] 2025-10-13 11:32:04,849 | INFO     | sum of deviations: -4610301462.5
[2025-10-13 07:32:58] 2025-10-13 11:32:04,849 | INFO     | mean x: 1760353041.5
[2025-10-13 07:32:58] 2025-10-13 11:32:04,850 | INFO     | mean y: 2854767.703125
[2025-10-13 07:32:58] 2025-10-13 11:32:04,850 | INFO     | -- intersect: 99868657042.08992
[2025-10-13 07:32:58] 2025-10-13 11:32:04,850 | INFO     | intersect: 99868657042.08992
[2025-10-13 07:32:58] 2025-10-13 11:32:04,850 | INFO     | chi2: 0.1451745366554496
[2025-10-13 07:32:58] 2025-10-13 11:32:04,850 | INFO     | -- intersect: 99868657042.08992
[2025-10-13 07:32:58] 2025-10-13 11:32:04,850 | INFO     | current memory leak: -56.73 B/s (using 64 data points, chi2=0.15)
[2025-10-13 07:32:58] 2025-10-13 11:32:04,851 | INFO     | could have reported an average CPU frequency of 2060 MHz (6 samples)
[2025-10-13 07:32:58] 2025-10-13 11:32:04,851 | INFO     | ..............................
[2025-10-13 07:32:58] 2025-10-13 11:32:04,851 | INFO     | . Timing measurements:
[2025-10-13 07:32:58] 2025-10-13 11:32:04,851 | INFO     | . get job = 0 s
[2025-10-13 07:32:58] 2025-10-13 11:32:04,851 | INFO     | . initial setup = 2 s
[2025-10-13 07:32:58] 2025-10-13 11:32:04,851 | INFO     | . payload setup = 7 s
[2025-10-13 07:32:58] 2025-10-13 11:32:04,851 | INFO     | . stage-in = 0 s
[2025-10-13 07:32:58] 2025-10-13 11:32:04,851 | INFO     | monitor loop #324: job 0:6842785217 is in state 'finished'
[2025-10-13 07:32:58] 2025-10-13 11:32:04,852 | INFO     | . payload execution = 4303 s
[2025-10-13 07:32:58] 2025-10-13 11:32:04,852 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 07:32:58] 2025-10-13 11:32:04,852 | INFO     | . stage-out = 0 s
[2025-10-13 07:32:58] 2025-10-13 11:32:04,852 | INFO     | . log creation = 0 s
[2025-10-13 07:32:58] 2025-10-13 11:32:04,853 | INFO     | ..............................
[2025-10-13 07:32:58] 2025-10-13 11:32:05,218 | INFO     | time since job start (4339s) is within the limit (172800.0s)
[2025-10-13 07:32:58] 2025-10-13 11:32:05,389 | INFO     | 
[2025-10-13 07:32:58] 2025-10-13 11:32:05,389 | INFO     | job summary report
[2025-10-13 07:32:58] 2025-10-13 11:32:05,390 | INFO     | --------------------------------------------------
[2025-10-13 07:32:58] 2025-10-13 11:32:05,390 | INFO     | PanDA job id: 6842785217
[2025-10-13 07:32:58] 2025-10-13 11:32:05,390 | INFO     | task id: 46676269
[2025-10-13 07:32:58] 2025-10-13 11:32:05,390 | INFO     | errors: (none)
[2025-10-13 07:32:58] 2025-10-13 11:32:05,390 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 07:32:58] 2025-10-13 11:32:05,390 | INFO     | pilot state: finished 
[2025-10-13 07:32:58] 2025-10-13 11:32:05,390 | INFO     | transexitcode: 0
[2025-10-13 07:32:58] 2025-10-13 11:32:05,390 | INFO     | exeerrorcode: 0
[2025-10-13 07:32:58] 2025-10-13 11:32:05,390 | INFO     | exeerrordiag: 
[2025-10-13 07:32:58] 2025-10-13 11:32:05,390 | INFO     | exitcode: 0
[2025-10-13 07:32:58] 2025-10-13 11:32:05,391 | INFO     | exitmsg: OK
[2025-10-13 07:32:58] 2025-10-13 11:32:05,391 | INFO     | cpuconsumptiontime: 45370 s
[2025-10-13 07:32:58] 2025-10-13 11:32:05,391 | INFO     | nevents: 400
[2025-10-13 07:32:58] 2025-10-13 11:32:05,391 | INFO     | neventsw: 0
[2025-10-13 07:32:58] 2025-10-13 11:32:05,391 | INFO     | pid: 8157
[2025-10-13 07:32:58] 2025-10-13 11:32:05,391 | INFO     | pgrp: 8157
[2025-10-13 07:32:58] 2025-10-13 11:32:05,391 | INFO     | corecount: 12
[2025-10-13 07:32:58] 2025-10-13 11:32:05,391 | INFO     | event service: False
[2025-10-13 07:32:58] 2025-10-13 11:32:05,391 | INFO     | sizes: {0: 2348579, 1: 2348834, 6: 2349096, 12: 2349124, 4314: 2375171, 4315: 2384169, 4316: 2384353, 4323: 2384547}
[2025-10-13 07:32:58] 2025-10-13 11:32:05,392 | INFO     | --------------------------------------------------
[2025-10-13 07:32:58] 2025-10-13 11:32:05,392 | INFO     | 
[2025-10-13 07:32:58] 2025-10-13 11:32:05,392 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 07:32:58] 2025-10-13 11:32:05,416 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 07:32:58] 2025-10-13 11:32:05,416 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 07:32:58] 2025-10-13 11:32:05,416 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 07:32:58] 2025-10-13 11:32:05,416 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 07:32:58] 2025-10-13 11:32:05,417 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 07:32:58] 2025-10-13 11:32:05,417 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 07:32:58] 2025-10-13 11:32:05,417 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 07:32:58] 2025-10-13 11:32:05,417 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 07:32:58] 2025-10-13 11:32:05,417 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 07:32:58] 2025-10-13 11:32:05,418 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 07:32:58] 2025-10-13 11:32:05,418 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 07:32:58] 2025-10-13 11:32:05,418 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 07:32:58] 2025-10-13 11:32:05,418 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 07:32:58] 2025-10-13 11:32:05,418 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 07:32:58] 2025-10-13 11:32:05,418 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 07:32:58] 2025-10-13 11:32:05,418 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 07:32:58] 2025-10-13 11:32:05,419 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 07:32:58] 2025-10-13 11:32:05,419 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 07:32:58] 2025-10-13 11:32:05,419 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 07:32:58] 2025-10-13 11:32:05,419 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 07:32:58] 2025-10-13 11:32:05,419 | INFO     | job 6842785217 has completed (purged errors)
[2025-10-13 07:32:58] 2025-10-13 11:32:05,419 | INFO     | overall cleanup function is called
[2025-10-13 07:32:58] 2025-10-13 11:32:06,426 | INFO     | --- collectZombieJob: --- 10, [8157]
[2025-10-13 07:32:58] 2025-10-13 11:32:06,426 | INFO     | zombie collector waiting for pid 8157
[2025-10-13 07:32:58] 2025-10-13 11:32:06,426 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 07:32:58] 2025-10-13 11:32:06,427 | INFO     | collected zombie processes
[2025-10-13 07:32:58] 2025-10-13 11:32:06,427 | INFO     | will attempt to kill all subprocesses of pid=8157
[2025-10-13 07:32:58] 2025-10-13 11:32:06,519 | INFO     | process IDs to be killed: [8157] (in reverse order)
[2025-10-13 07:32:58] 2025-10-13 11:32:06,571 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 07:32:58] 2025-10-13 11:32:06,571 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 07:32:58] 2025-10-13 11:32:06,575 | INFO     | did not find any defunct processes belonging to 8157
[2025-10-13 07:32:58] 2025-10-13 11:32:06,578 | INFO     | did not find any defunct processes belonging to 8157
[2025-10-13 07:32:58] 2025-10-13 11:32:06,579 | INFO     | ready for new job
[2025-10-13 07:32:58] 2025-10-13 11:32:06,579 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 07:32:58] 2025-10-13 11:32:06,580 | INFO     | ***************************************
[2025-10-13 07:32:58] 2025-10-13 11:32:06,580 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 07:32:58] 2025-10-13 11:32:06,580 | INFO     | ***************************************
[2025-10-13 07:32:58] 2025-10-13 11:32:06,580 | INFO     | 
[2025-10-13 07:32:58] 2025-10-13 11:32:06,581 | INFO     | architecture information:
[2025-10-13 07:32:58] 2025-10-13 11:32:06,581 | INFO     | executing command: cat /etc/os-release
[2025-10-13 07:32:58] 2025-10-13 11:32:06,596 | INFO     | cat /etc/os-release:
[2025-10-13 07:32:58] NAME="CentOS Linux"
[2025-10-13 07:32:58] VERSION="7 (Core)"
[2025-10-13 07:32:58] ID="centos"
[2025-10-13 07:32:58] ID_LIKE="rhel fedora"
[2025-10-13 07:32:58] VERSION_ID="7"
[2025-10-13 07:32:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 07:32:58] ANSI_COLOR="0;31"
[2025-10-13 07:32:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 07:32:58] HOME_URL="https://www.centos.org/"
[2025-10-13 07:32:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 07:32:58] 
[2025-10-13 07:32:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 07:32:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 07:32:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 07:32:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 07:32:58] 
[2025-10-13 07:32:58] 2025-10-13 11:32:06,597 | INFO     | ***************************************
[2025-10-13 07:32:58] 2025-10-13 11:32:07,100 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 07:32:58] 2025-10-13 11:32:07,116 | INFO     | sufficient remaining disk space (29352787968 B)
[2025-10-13 07:32:58] 2025-10-13 11:32:07,117 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 07:32:58] 2025-10-13 11:32:07,117 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 07:32:58] 2025-10-13 11:32:07,117 | INFO     | update_server=False
[2025-10-13 07:32:58] 2025-10-13 11:32:07,117 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 07:32:58] 2025-10-13 11:32:07,117 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-13 07:32:58] 2025-10-13 11:32:07,118 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 07:32:58] 2025-10-13 11:32:07,118 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 07:32:58] 2025-10-13 11:32:07,118 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 07:32:58] 2025-10-13 11:32:07,247 | INFO     | all job control threads have been joined
[2025-10-13 07:32:58] 2025-10-13 11:32:07,355 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 07:32:58] 2025-10-13 11:32:07,356 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 07:32:58] 2025-10-13 11:32:07,356 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:32:58] 2025-10-13 11:32:07,356 | INFO     | will abort loop
[2025-10-13 07:32:58] 2025-10-13 11:32:07,706 | INFO     | all data control threads have been joined
[2025-10-13 07:32:58] 2025-10-13 11:32:07,726 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 07:32:58] 2025-10-13 11:32:08,123 | INFO     | [job] retrieve thread has finished
[2025-10-13 07:32:58] 2025-10-13 11:32:08,203 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 07:32:58] 2025-10-13 11:32:08,253 | INFO     | [job] control thread has finished
[2025-10-13 07:32:58] 2025-10-13 11:32:08,262 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 07:32:58] 2025-10-13 11:32:08,361 | INFO     | [job] job monitor thread has finished
[2025-10-13 07:32:58] 2025-10-13 11:32:08,586 | INFO     | [payload] validate_post thread has finished
[2025-10-13 07:32:58] 2025-10-13 11:32:08,615 | INFO     | all payload control threads have been joined
[2025-10-13 07:32:58] 2025-10-13 11:32:08,711 | INFO     | [data] control thread has finished
[2025-10-13 07:32:58] 2025-10-13 11:32:08,747 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 07:32:58] 2025-10-13 11:32:08,941 | INFO     | [data] copytool_in thread has finished
[2025-10-13 07:32:58] 2025-10-13 11:32:09,302 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 07:32:58] 2025-10-13 11:32:09,348 | INFO     | [payload] failed_post thread has finished
[2025-10-13 07:32:58] 2025-10-13 11:32:09,360 | INFO     | [job] validate thread has finished
[2025-10-13 07:32:58] 2025-10-13 11:32:09,621 | INFO     | [payload] control thread has finished
[2025-10-13 07:32:58] 2025-10-13 11:32:09,732 | INFO     | [data] copytool_out thread has finished
[2025-10-13 07:32:58] 2025-10-13 11:32:09,945 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:32:58] 2025-10-13 11:32:10,950 | INFO     | [job] queue monitor thread has finished
[2025-10-13 07:32:58] 2025-10-13 11:32:12,209 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 07:32:58] 2025-10-13 11:32:17,213 | INFO     | job.realtimelogging is not enabled
[2025-10-13 07:32:58] 2025-10-13 11:32:18,216 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 07:32:58] 2025-10-13 11:32:52,536 | INFO     | [monitor] cgroup control has ended
[2025-10-13 07:32:58] 2025-10-13 11:32:52,986 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140295161595712)>', '<ExcThread(monitor, started 140294855038720)>']
[2025-10-13 07:32:58] 2025-10-13 11:32:53,315 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 07:32:58] 2025-10-13 11:32:53,316 | INFO     | [monitor] control thread has ended
[2025-10-13 07:32:58] 2025-10-13 11:32:58,011 | INFO     | all workflow threads have been joined
[2025-10-13 07:32:58] 2025-10-13 11:32:58,012 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 07:32:58] 2025-10-13 11:32:58,017 | INFO     | traces error code: 0
[2025-10-13 07:32:58] 2025-10-13 11:32:58,017 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 07:32:58] 2025-10-13 11:32:58,109 [wrapper] ==== pilot stdout END ====
[2025-10-13 07:32:58] 2025-10-13 11:32:58,113 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 07:32:58] 2025-10-13 11:32:58,116 [wrapper] pilotpid: 697
[2025-10-13 07:32:58] 2025-10-13 11:32:58,121 [wrapper] Pilot exit status: 0
[2025-10-13 07:32:58] 2025-10-13 11:32:58,137 [wrapper] pandaids: 6842785217
[2025-10-13 07:32:58] 2025-10-13 11:32:58,183 [wrapper] cleanup supervisor_pilot 13281 698
[2025-10-13 07:32:58] 2025-10-13 11:32:58,187 [wrapper] Test setup, not cleaning
[2025-10-13 07:32:58] 2025-10-13 11:32:58,191 [wrapper] apfmon messages muted
[2025-10-13 07:32:58] 2025-10-13 11:32:58,195 [wrapper] ==== wrapper stdout END ====
[2025-10-13 07:32:58] 2025-10-13 11:32:58,199 [wrapper] ==== wrapper stderr END ====
[2025-10-13 07:32:58]  *** Error codes and diagnostics ***
[2025-10-13 07:32:58]     "exeErrorCode": 0,
[2025-10-13 07:32:58]     "exeErrorDiag": "",
[2025-10-13 07:32:58]     "pilotErrorCode": 0,
[2025-10-13 07:32:58]     "pilotErrorDiag": "",
[2025-10-13 07:32:58]  *** Listing of results directory ***
[2025-10-13 07:32:58] total 411176
[2025-10-13 07:32:58] -rw-r--r-- 1 boincer umatlas    557409 Oct 13 05:31 pilot3.tar.gz
[2025-10-13 07:32:58] -rwx------ 1 boincer umatlas     36292 Oct 13 05:49 runpilot2-wrapper.sh
[2025-10-13 07:32:58] -rw-r--r-- 1 boincer umatlas      5112 Oct 13 05:49 queuedata.json
[2025-10-13 07:32:58] -rw-r--r-- 1 boincer umatlas       100 Oct 13 06:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 07:32:58] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 06:19 run_atlas
[2025-10-13 07:32:58] -rw-r--r-- 1 boincer umatlas       105 Oct 13 06:19 job.xml
[2025-10-13 07:32:58] -rw-r--r-- 2 boincer umatlas 223287844 Oct 13 06:19 EVNT.46676267._004424.pool.root.1
[2025-10-13 07:32:58] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 06:19 start_atlas.sh
[2025-10-13 07:32:58] drwxrwx--x 2 boincer umatlas      4096 Oct 13 06:19 shared
[2025-10-13 07:32:58] -rw-r--r-- 2 boincer umatlas    569683 Oct 13 06:19 input.tar.gz
[2025-10-13 07:32:58] -rw-r--r-- 1 boincer umatlas         0 Oct 13 06:19 boinc_lockfile
[2025-10-13 07:32:58] -rw-r--r-- 1 boincer umatlas      2549 Oct 13 06:19 pandaJob.out
[2025-10-13 07:32:58] -rw------- 1 boincer umatlas    972497 Oct 13 06:19 agis_schedconf.cvmfs.json
[2025-10-13 07:32:58] -rw------- 1 boincer umatlas   1560580 Oct 13 06:19 agis_ddmendpoints.agis.ALL.json
[2025-10-13 07:32:58] drwx------ 5 boincer umatlas      4096 Oct 13 06:19 pilot3
[2025-10-13 07:32:58] -rw-r--r-- 1 boincer umatlas      5952 Oct 13 07:30 init_data.xml
[2025-10-13 07:32:58] -rw------- 1 boincer umatlas 191822290 Oct 13 07:31 HITS.46676269._096598.pool.root.1
[2025-10-13 07:32:58] -rw------- 1 boincer umatlas        95 Oct 13 07:31 pilot_heartbeat.json
[2025-10-13 07:32:58] -rw------- 1 boincer umatlas      1046 Oct 13 07:31 memory_monitor_summary.json
[2025-10-13 07:32:58] -rw------- 1 boincer umatlas    389723 Oct 13 07:31 log.46676269._096598.job.log.tgz.1
[2025-10-13 07:32:58] -rw-r--r-- 1 boincer umatlas       529 Oct 13 07:31 boinc_task_state.xml
[2025-10-13 07:32:58] -rw------- 1 boincer umatlas      7852 Oct 13 07:32 heartbeat.json
[2025-10-13 07:32:58] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 07:32 boinc_mmap_file
[2025-10-13 07:32:58] -rw-r--r-- 1 boincer umatlas        27 Oct 13 07:32 wrapper_checkpoint.txt
[2025-10-13 07:32:58] -rw------- 1 boincer umatlas      4810 Oct 13 07:32 pilotlog.txt
[2025-10-13 07:32:58] -rw------- 1 boincer umatlas    630039 Oct 13 07:32 log.46676269._096598.job.log.1
[2025-10-13 07:32:58] -rw------- 1 boincer umatlas       357 Oct 13 07:32 output.list
[2025-10-13 07:32:58] -rw-r--r-- 1 boincer umatlas       620 Oct 13 07:32 runtime_log
[2025-10-13 07:32:58] -rw------- 1 boincer umatlas   1034240 Oct 13 07:32 result.tar.gz
[2025-10-13 07:32:58] -rw-r--r-- 1 boincer umatlas      8700 Oct 13 07:32 runtime_log.err
[2025-10-13 07:32:58] -rw------- 1 boincer umatlas       658 Oct 13 07:32 MNjMDm8LUS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmZkmNDmFYPYxm.diag
[2025-10-13 07:32:58] -rw-r--r-- 1 boincer umatlas     22148 Oct 13 07:32 stderr.txt
[2025-10-13 07:32:58] HITS file was successfully produced:
[2025-10-13 07:32:58] -rw------- 1 boincer umatlas 191822290 Oct 13 07:31 shared/HITS.pool.root.1
[2025-10-13 07:32:58]  *** Contents of shared directory: ***
[2025-10-13 07:32:58] total 406976
[2025-10-13 07:32:58] -rw-r--r-- 2 boincer umatlas 223287844 Oct 13 06:19 ATLAS.root_0
[2025-10-13 07:32:58] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 06:19 start_atlas.sh
[2025-10-13 07:32:58] -rw-r--r-- 2 boincer umatlas    569683 Oct 13 06:19 input.tar.gz
[2025-10-13 07:32:58] -rw------- 1 boincer umatlas 191822290 Oct 13 07:31 HITS.pool.root.1
[2025-10-13 07:32:58] -rw------- 1 boincer umatlas   1034240 Oct 13 07:32 result.tar.gz
07:32:59 (29467): run_atlas exited; CPU time 45344.708541
07:32:59 (29467): called boinc_finish(0)

</stderr_txt>
]]>

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