Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:26:53 (3331910): wrapper (7.7.26015): starting
06:26:53 (3331910): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 06:26:53] Arguments: --nthreads 12
[2025-10-13 06:26:53] Threads: 12
[2025-10-13 06:26:53] Checking for CVMFS
[2025-10-13 06:26:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 06:26:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 06:26:53] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 06:26:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 06:26:53] 2.13.2.0 3683012 14106 147880 151658 2 188 38556472 40960001 5645 16776704 0 164326344 99.875 55118676 32598 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 06:26:53] CVMFS is ok
[2025-10-13 06:26:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 06:26:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 06:26:53] Further information can be found at the LHC@home message board.
[2025-10-13 06:26:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 06:26:53] Checking for apptainer binary...
[2025-10-13 06:26:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 06:26:53] Running /usr/bin/apptainer --version
[2025-10-13 06:26:53] apptainer version 1.4.3-1.el9
[2025-10-13 06:26:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 06:26:54] c8-7-4.aglt2.org
[2025-10-13 06:26:54] apptainer works
[2025-10-13 06:26:54] Set ATHENA_PROC_NUMBER=12
[2025-10-13 06:26:54] Set ATHENA_CORE_NUMBER=12
[2025-10-13 06:26:54] Starting ATLAS job with PandaID=6842724001
[2025-10-13 06:26:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 06:51:11]  *** The last 200 lines of the pilot log: ***
[2025-10-13 06:51:11]  storage_token=
[2025-10-13 06:51:11]  surl=/tmp/boinchome/slots/7/PanDA_Pilot-6842724001/log.46676269._096486.job.log.tgz.1
[2025-10-13 06:51:11]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0c/47/log.46676269._096486.job.log.tgz.1
[2025-10-13 06:51:11]  workdir=None
[2025-10-13 06:51:11] ]
[2025-10-13 06:51:11] 2025-10-13 10:50:31,121 | INFO     | transferring file log.46676269._096486.job.log.tgz.1 from /tmp/boinchome/slots/7/PanDA_Pilot-6842724001/log.46676269._096486.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-13 06:51:11] 2025-10-13 10:50:31,121 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/7/PanDA_Pilot-6842724001/log.46676269._096486.job.log.tgz.1 /tmp/boinchome/slots/7/log.46676269._096486.job
[2025-10-13 06:51:11] 2025-10-13 10:50:31,133 | INFO     | adding to output.list: log.46676269._096486.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0c/47/log.46676269._096486.job.log.tg
[2025-10-13 06:51:11] 2025-10-13 10:50:31,133 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 06:51:11] 2025-10-13 10:50:31,133 | INFO     | summary of transferred files:
[2025-10-13 06:51:11] 2025-10-13 10:50:31,133 | INFO     |  -- lfn=log.46676269._096486.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 06:51:11] 2025-10-13 10:50:31,134 | INFO     | stage-out finished correctly
[2025-10-13 06:51:11] 2025-10-13 10:50:31,225 | WARNING  | process 3342181 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 06:51:11] 2025-10-13 10:50:31,225 | INFO     | using path: /tmp/boinchome/slots/7/PanDA_Pilot-6842724001/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 06:51:11] 2025-10-13 10:50:31,252 | INFO     | time since job start (1408s) is within the limit (172800.0s)
[2025-10-13 06:51:11] 2025-10-13 10:50:31,413 | INFO     | number of running child processes to parent process 3342181: 1
[2025-10-13 06:51:11] 2025-10-13 10:50:31,413 | INFO     | maximum number of monitored processes: 6
[2025-10-13 06:51:11] 2025-10-13 10:50:33,257 | INFO     | time since job start (1410s) is within the limit (172800.0s)
[2025-10-13 06:51:11] 2025-10-13 10:50:33,916 | INFO     | monitor loop #109: job 0:6842724001 is in state 'finished'
[2025-10-13 06:51:11] 2025-10-13 10:50:33,916 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 06:51:11] 2025-10-13 10:50:34,519 | INFO     | PID=3335640 has CPU usage=6.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 06:51:11] 2025-10-13 10:50:34,519 | INFO     | .. there are 2 such processes running
[2025-10-13 06:51:11] 2025-10-13 10:50:34,627 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 06:51:11] 2025-10-13 10:50:35,502 | INFO     | job 6842724001 has state=finished
[2025-10-13 06:51:11] 2025-10-13 10:50:35,502 | INFO     | preparing for final server update for job 6842724001 in state='finished'
[2025-10-13 06:51:11] 2025-10-13 10:50:35,502 | INFO     | this job has now completed (state=finished)
[2025-10-13 06:51:11] 2025-10-13 10:50:35,502 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 06:51:11] 2025-10-13 10:50:35,502 | INFO     | log transfer has been attempted: DONE
[2025-10-13 06:51:11] 2025-10-13 10:50:35,502 | INFO     | job 6842724001 has finished - writing final server update
[2025-10-13 06:51:11] 2025-10-13 10:50:35,502 | INFO     | total number of processed events: 400 (read)
[2025-10-13 06:51:11] 2025-10-13 10:50:35,503 | INFO     | executing command: lscpu
[2025-10-13 06:51:11] 2025-10-13 10:50:35,519 | INFO     | time since job start (1412s) is within the limit (172800.0s)
[2025-10-13 06:51:11] 2025-10-13 10:50:35,552 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 06:51:11] 2025-10-13 10:50:36,418 | INFO     | monitor loop #110: job 0:6842724001 is in state 'finished'
[2025-10-13 06:51:11] 2025-10-13 10:50:36,418 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 06:51:11] 2025-10-13 10:50:37,525 | INFO     | time since job start (1414s) is within the limit (172800.0s)
[2025-10-13 06:51:11] 2025-10-13 10:50:38,028 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-13 06:51:11] 2025-10-13 10:50:38,044 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3254.4548671874923
[2025-10-13 06:51:11] 2025-10-13 10:50:38,052 | INFO     | using path: /tmp/boinchome/slots/7/PanDA_Pilot-6842724001/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 06:51:11] 2025-10-13 10:50:38,052 | INFO     | extracted standard info from prmon json
[2025-10-13 06:51:11] 2025-10-13 10:50:38,052 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 06:51:11] 2025-10-13 10:50:38,052 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 06:51:11] 2025-10-13 10:50:38,052 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 06:51:11] 2025-10-13 10:50:38,052 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 06:51:11] 2025-10-13 10:50:38,053 | INFO     | fitting pss+swap vs Time
[2025-10-13 06:51:11] 2025-10-13 10:50:38,053 | INFO     | sum of square deviations: 1265140.0
[2025-10-13 06:51:11] 2025-10-13 10:50:38,053 | INFO     | sum of deviations: 769385649.5
[2025-10-13 06:51:11] 2025-10-13 10:50:38,053 | INFO     | mean x: 1760352009.5
[2025-10-13 06:51:11] 2025-10-13 10:50:38,053 | INFO     | mean y: 2627790.6875
[2025-10-13 06:51:11] 2025-10-13 10:50:38,053 | INFO     | -- intersect: -1070542587899.1078
[2025-10-13 06:51:11] 2025-10-13 10:50:38,053 | INFO     | intersect: -1070542587899.1078
[2025-10-13 06:51:11] 2025-10-13 10:50:38,054 | INFO     | chi2: 0.011580271009550424
[2025-10-13 06:51:11] 2025-10-13 10:50:38,054 | INFO     | -- intersect: -1070542587899.1078
[2025-10-13 06:51:11] 2025-10-13 10:50:38,054 | INFO     | current memory leak: 608.14 B/s (using 16 data points, chi2=0.01)
[2025-10-13 06:51:11] 2025-10-13 10:50:38,054 | INFO     | could have reported an average CPU frequency of 3490 MHz (4 samples)
[2025-10-13 06:51:11] 2025-10-13 10:50:38,054 | INFO     | ..............................
[2025-10-13 06:51:11] 2025-10-13 10:50:38,054 | INFO     | . Timing measurements:
[2025-10-13 06:51:11] 2025-10-13 10:50:38,054 | INFO     | . get job = 0 s
[2025-10-13 06:51:11] 2025-10-13 10:50:38,054 | INFO     | . initial setup = 2 s
[2025-10-13 06:51:11] 2025-10-13 10:50:38,054 | INFO     | . payload setup = 4 s
[2025-10-13 06:51:11] 2025-10-13 10:50:38,054 | INFO     | . stage-in = 0 s
[2025-10-13 06:51:11] 2025-10-13 10:50:38,054 | INFO     | . payload execution = 1383 s
[2025-10-13 06:51:11] 2025-10-13 10:50:38,054 | INFO     | . stage-out = 0 s
[2025-10-13 06:51:11] 2025-10-13 10:50:38,054 | INFO     | . log creation = 0 s
[2025-10-13 06:51:11] 2025-10-13 10:50:38,054 | INFO     | ..............................
[2025-10-13 06:51:11] 2025-10-13 10:50:38,088 | INFO     | 
[2025-10-13 06:51:11] 2025-10-13 10:50:38,088 | INFO     | job summary report
[2025-10-13 06:51:11] 2025-10-13 10:50:38,088 | INFO     | --------------------------------------------------
[2025-10-13 06:51:11] 2025-10-13 10:50:38,088 | INFO     | PanDA job id: 6842724001
[2025-10-13 06:51:11] 2025-10-13 10:50:38,088 | INFO     | task id: 46676269
[2025-10-13 06:51:11] 2025-10-13 10:50:38,088 | INFO     | errors: (none)
[2025-10-13 06:51:11] 2025-10-13 10:50:38,088 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 06:51:11] 2025-10-13 10:50:38,088 | INFO     | pilot state: finished 
[2025-10-13 06:51:11] 2025-10-13 10:50:38,088 | INFO     | transexitcode: 0
[2025-10-13 06:51:11] 2025-10-13 10:50:38,088 | INFO     | exeerrorcode: 0
[2025-10-13 06:51:11] 2025-10-13 10:50:38,088 | INFO     | exeerrordiag: 
[2025-10-13 06:51:11] 2025-10-13 10:50:38,088 | INFO     | exitcode: 0
[2025-10-13 06:51:11] 2025-10-13 10:50:38,088 | INFO     | exitmsg: OK
[2025-10-13 06:51:11] 2025-10-13 10:50:38,088 | INFO     | cpuconsumptiontime: 14286 s
[2025-10-13 06:51:11] 2025-10-13 10:50:38,088 | INFO     | nevents: 400
[2025-10-13 06:51:11] 2025-10-13 10:50:38,088 | INFO     | neventsw: 0
[2025-10-13 06:51:11] 2025-10-13 10:50:38,088 | INFO     | pid: 3342181
[2025-10-13 06:51:11] 2025-10-13 10:50:38,088 | INFO     | pgrp: 3342181
[2025-10-13 06:51:11] 2025-10-13 10:50:38,088 | INFO     | corecount: 12
[2025-10-13 06:51:11] 2025-10-13 10:50:38,088 | INFO     | event service: False
[2025-10-13 06:51:11] 2025-10-13 10:50:38,088 | INFO     | sizes: {0: 2348634, 1: 2348833, 4: 2349095, 11: 2349123, 1392: 2373902, 1393: 2382900, 1397: 2383084, 1400: 2383278}
[2025-10-13 06:51:11] 2025-10-13 10:50:38,088 | INFO     | --------------------------------------------------
[2025-10-13 06:51:11] 2025-10-13 10:50:38,088 | INFO     | 
[2025-10-13 06:51:11] 2025-10-13 10:50:38,089 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2025-10-13 06:51:11] 2025-10-13 10:50:38,101 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 06:51:11] 2025-10-13 10:50:38,101 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 06:51:11] 2025-10-13 10:50:38,101 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 06:51:11] 2025-10-13 10:50:38,101 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 06:51:11] 2025-10-13 10:50:38,101 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 06:51:11] 2025-10-13 10:50:38,101 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 06:51:11] 2025-10-13 10:50:38,101 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 06:51:11] 2025-10-13 10:50:38,102 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 06:51:11] 2025-10-13 10:50:38,102 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 06:51:11] 2025-10-13 10:50:38,102 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 06:51:11] 2025-10-13 10:50:38,102 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 06:51:11] 2025-10-13 10:50:38,102 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 06:51:11] 2025-10-13 10:50:38,102 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 06:51:11] 2025-10-13 10:50:38,102 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 06:51:11] 2025-10-13 10:50:38,102 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 06:51:11] 2025-10-13 10:50:38,102 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 06:51:11] 2025-10-13 10:50:38,102 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 06:51:11] 2025-10-13 10:50:38,102 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 06:51:11] 2025-10-13 10:50:38,102 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 06:51:11] 2025-10-13 10:50:38,102 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 06:51:11] 2025-10-13 10:50:38,102 | INFO     | job 6842724001 has completed (purged errors)
[2025-10-13 06:51:11] 2025-10-13 10:50:38,102 | INFO     | overall cleanup function is called
[2025-10-13 06:51:11] 2025-10-13 10:50:39,109 | INFO     | --- collectZombieJob: --- 10, [3342181]
[2025-10-13 06:51:11] 2025-10-13 10:50:39,109 | INFO     | zombie collector waiting for pid 3342181
[2025-10-13 06:51:11] 2025-10-13 10:50:39,109 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 06:51:11] 2025-10-13 10:50:39,109 | INFO     | collected zombie processes
[2025-10-13 06:51:11] 2025-10-13 10:50:39,109 | INFO     | will attempt to kill all subprocesses of pid=3342181
[2025-10-13 06:51:11] 2025-10-13 10:50:39,303 | INFO     | process IDs to be killed: [3342181] (in reverse order)
[2025-10-13 06:51:11] 2025-10-13 10:50:39,381 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 06:51:11] 2025-10-13 10:50:39,381 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 06:51:11] 2025-10-13 10:50:39,390 | INFO     | did not find any defunct processes belonging to 3342181
[2025-10-13 06:51:11] 2025-10-13 10:50:39,397 | INFO     | did not find any defunct processes belonging to 3342181
[2025-10-13 06:51:11] 2025-10-13 10:50:39,397 | INFO     | ready for new job
[2025-10-13 06:51:11] 2025-10-13 10:50:39,398 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 06:51:11] 2025-10-13 10:50:39,398 | INFO     | ***************************************
[2025-10-13 06:51:11] 2025-10-13 10:50:39,398 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 06:51:11] 2025-10-13 10:50:39,398 | INFO     | ***************************************
[2025-10-13 06:51:11] 2025-10-13 10:50:39,398 | INFO     | 
[2025-10-13 06:51:11] 2025-10-13 10:50:39,414 | INFO     | architecture information:
[2025-10-13 06:51:11] 2025-10-13 10:50:39,414 | INFO     | executing command: cat /etc/os-release
[2025-10-13 06:51:11] 2025-10-13 10:50:39,425 | INFO     | cat /etc/os-release:
[2025-10-13 06:51:11] NAME="CentOS Linux"
[2025-10-13 06:51:11] VERSION="7 (Core)"
[2025-10-13 06:51:11] ID="centos"
[2025-10-13 06:51:11] ID_LIKE="rhel fedora"
[2025-10-13 06:51:11] VERSION_ID="7"
[2025-10-13 06:51:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 06:51:11] ANSI_COLOR="0;31"
[2025-10-13 06:51:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 06:51:11] HOME_URL="https://www.centos.org/"
[2025-10-13 06:51:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 06:51:11] 
[2025-10-13 06:51:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 06:51:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 06:51:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 06:51:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 06:51:11] 
[2025-10-13 06:51:11] 2025-10-13 10:50:39,425 | INFO     | ***************************************
[2025-10-13 06:51:11] 2025-10-13 10:50:39,928 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2025-10-13 06:51:11] 2025-10-13 10:50:39,939 | INFO     | sufficient remaining disk space (172354437120 B)
[2025-10-13 06:51:11] 2025-10-13 10:50:39,939 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 06:51:11] 2025-10-13 10:50:39,939 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 06:51:11] 2025-10-13 10:50:39,939 | INFO     | update_server=False
[2025-10-13 06:51:11] 2025-10-13 10:50:39,939 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 06:51:11] 2025-10-13 10:50:39,939 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 06:51:11] 2025-10-13 10:50:39,939 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:51:11] 2025-10-13 10:50:39,940 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:51:11] 2025-10-13 10:50:39,940 | INFO     | aborting loop
[2025-10-13 06:51:11] 2025-10-13 10:50:40,664 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 06:51:11] 2025-10-13 10:50:40,777 | INFO     | all data control threads have been joined
[2025-10-13 06:51:11] 2025-10-13 10:50:40,944 | INFO     | [job] retrieve thread has finished
[2025-10-13 06:51:11] 2025-10-13 10:50:40,945 | INFO     | [job] queue monitor thread has finished
[2025-10-13 06:51:11] 2025-10-13 10:50:40,946 | INFO     | [job] job monitor thread has finished
[2025-10-13 06:51:11] 2025-10-13 10:50:41,210 | INFO     | all payload control threads have been joined
[2025-10-13 06:51:11] 2025-10-13 10:50:41,212 | INFO     | all job control threads have been joined
[2025-10-13 06:51:11] 2025-10-13 10:50:41,304 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 06:51:11] 2025-10-13 10:50:41,376 | INFO     | [job] validate thread has finished
[2025-10-13 06:51:11] 2025-10-13 10:50:41,506 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 06:51:11] 2025-10-13 10:50:41,616 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 06:51:11] 2025-10-13 10:50:41,783 | INFO     | [data] control thread has finished
[2025-10-13 06:51:11] 2025-10-13 10:50:41,945 | INFO     | [data] copytool_out thread has finished
[2025-10-13 06:51:11] 2025-10-13 10:50:42,038 | INFO     | [payload] validate_post thread has finished
[2025-10-13 06:51:11] 2025-10-13 10:50:42,098 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 06:51:11] 2025-10-13 10:50:42,215 | INFO     | [payload] control thread has finished
[2025-10-13 06:51:11] 2025-10-13 10:50:42,217 | INFO     | [job] control thread has finished
[2025-10-13 06:51:11] 2025-10-13 10:50:42,424 | INFO     | [data] copytool_in thread has finished
[2025-10-13 06:51:11] 2025-10-13 10:50:42,444 | INFO     | [payload] failed_post thread has finished
[2025-10-13 06:51:11] 2025-10-13 10:50:44,669 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 06:51:11] 2025-10-13 10:51:04,565 | INFO     | [monitor] cgroup control has ended
[2025-10-13 06:51:11] 2025-10-13 10:51:04,618 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139820454840128)>', '<ExcThread(monitor, started 139819816568576)>']
[2025-10-13 06:51:11] 2025-10-13 10:51:09,643 | INFO     | all workflow threads have been joined
[2025-10-13 06:51:11] 2025-10-13 10:51:09,643 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 06:51:11] 2025-10-13 10:51:09,643 | INFO     | traces error code: 0
[2025-10-13 06:51:11] 2025-10-13 10:51:09,644 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 06:51:11] 2025-10-13 10:51:10,854 | INFO     | PID=3335640 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 06:51:11] 2025-10-13 10:51:10,854 | INFO     | .. there are 2 such processes running
[2025-10-13 06:51:11] 2025-10-13 10:51:10,854 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 06:51:11] 2025-10-13 10:51:10,854 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 06:51:11] 2025-10-13 10:51:10,854 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 06:51:11] 2025-10-13 10:51:10,854 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 06:51:11] 2025-10-13 10:51:10,854 | INFO     | [monitor] control thread has ended
[2025-10-13 06:51:11] 2025-10-13 10:51:10,903 [wrapper] ==== pilot stdout END ====
[2025-10-13 06:51:11] 2025-10-13 10:51:10,905 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 06:51:11] 2025-10-13 10:51:10,907 [wrapper] pilotpid: 3335640
[2025-10-13 06:51:11] 2025-10-13 10:51:10,909 [wrapper] Pilot exit status: 0
[2025-10-13 06:51:11] 2025-10-13 10:51:10,915 [wrapper] pandaids: 6842724001
[2025-10-13 06:51:11] 2025-10-13 10:51:10,974 [wrapper] cleanup supervisor_pilot 3408854 3335641
[2025-10-13 06:51:11] 2025-10-13 10:51:10,976 [wrapper] Test setup, not cleaning
[2025-10-13 06:51:11] 2025-10-13 10:51:10,978 [wrapper] apfmon messages muted
[2025-10-13 06:51:11] 2025-10-13 10:51:10,980 [wrapper] ==== wrapper stdout END ====
[2025-10-13 06:51:11] 2025-10-13 10:51:10,981 [wrapper] ==== wrapper stderr END ====
[2025-10-13 06:51:11]  *** Error codes and diagnostics ***
[2025-10-13 06:51:11]     "exeErrorCode": 0,
[2025-10-13 06:51:11]     "exeErrorDiag": "",
[2025-10-13 06:51:11]     "pilotErrorCode": 0,
[2025-10-13 06:51:11]     "pilotErrorDiag": "",
[2025-10-13 06:51:11]  *** Listing of results directory ***
[2025-10-13 06:51:11] total 401788
[2025-10-13 06:51:11] -rwx------. 1 boincer umatlas     36292 Oct 13 04:22 runpilot2-wrapper.sh
[2025-10-13 06:51:11] -rw-r--r--. 1 boincer umatlas      5112 Oct 13 04:22 queuedata.json
[2025-10-13 06:51:11] -rw-r--r--. 1 boincer umatlas    557409 Oct 13 04:22 pilot3.tar.gz
[2025-10-13 06:51:11] -rw-r--r--. 1 boincer umatlas       100 Oct 13 06:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 06:51:11] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 06:26 run_atlas
[2025-10-13 06:51:11] -rw-r--r--. 1 boincer umatlas       105 Oct 13 06:26 job.xml
[2025-10-13 06:51:11] -rw-r--r--. 2 boincer umatlas 220967499 Oct 13 06:26 EVNT.46676267._000981.pool.root.1
[2025-10-13 06:51:11] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 06:26 start_atlas.sh
[2025-10-13 06:51:11] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 06:26 shared
[2025-10-13 06:51:11] -rw-r--r--. 2 boincer umatlas    569676 Oct 13 06:26 input.tar.gz
[2025-10-13 06:51:11] -rw-r--r--. 1 boincer umatlas         0 Oct 13 06:26 boinc_lockfile
[2025-10-13 06:51:11] -rw-r--r--. 1 boincer umatlas      2549 Oct 13 06:26 pandaJob.out
[2025-10-13 06:51:11] -rw-------. 1 boincer umatlas    972497 Oct 13 06:27 agis_schedconf.cvmfs.json
[2025-10-13 06:51:11] -rw-------. 1 boincer umatlas   1560580 Oct 13 06:27 agis_ddmendpoints.agis.ALL.json
[2025-10-13 06:51:11] drwx------. 5 boincer umatlas      4096 Oct 13 06:27 pilot3
[2025-10-13 06:51:11] -rw-r--r--. 1 boincer umatlas      7164 Oct 13 06:47 init_data.xml
[2025-10-13 06:51:11] -rw-r--r--. 1 boincer umatlas       529 Oct 13 06:50 boinc_task_state.xml
[2025-10-13 06:51:11] -rw-------. 1 boincer umatlas 185373478 Oct 13 06:50 HITS.46676269._096486.pool.root.1
[2025-10-13 06:51:11] -rw-------. 1 boincer umatlas        95 Oct 13 06:50 pilot_heartbeat.json
[2025-10-13 06:51:11] -rw-------. 1 boincer umatlas      1026 Oct 13 06:50 memory_monitor_summary.json
[2025-10-13 06:51:11] -rw-------. 1 boincer umatlas    344431 Oct 13 06:50 log.46676269._096486.job.log.tgz.1
[2025-10-13 06:51:11] -rw-------. 1 boincer umatlas      7771 Oct 13 06:50 heartbeat.json
[2025-10-13 06:51:11] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 06:51 boinc_mmap_file
[2025-10-13 06:51:11] -rw-r--r--. 1 boincer umatlas        27 Oct 13 06:51 wrapper_checkpoint.txt
[2025-10-13 06:51:11] -rw-------. 1 boincer umatlas       822 Oct 13 06:51 pilotlog.txt
[2025-10-13 06:51:11] -rw-------. 1 boincer umatlas    246479 Oct 13 06:51 log.46676269._096486.job.log.1
[2025-10-13 06:51:11] -rw-------. 1 boincer umatlas       357 Oct 13 06:51 output.list
[2025-10-13 06:51:11] -rw-r--r--. 1 boincer umatlas       620 Oct 13 06:51 runtime_log
[2025-10-13 06:51:11] -rw-------. 1 boincer umatlas    614400 Oct 13 06:51 result.tar.gz
[2025-10-13 06:51:11] -rw-------. 1 boincer umatlas       644 Oct 13 06:51 y0ULDm0zSS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmViVMDmeqkkUo.diag
[2025-10-13 06:51:11] -rw-r--r--. 1 boincer umatlas      8695 Oct 13 06:51 runtime_log.err
[2025-10-13 06:51:11] -rw-r--r--. 1 boincer umatlas     22296 Oct 13 06:51 stderr.txt
[2025-10-13 06:51:11] HITS file was successfully produced:
[2025-10-13 06:51:11] -rw-------. 1 boincer umatlas 185373478 Oct 13 06:50 shared/HITS.pool.root.1
[2025-10-13 06:51:11]  *** Contents of shared directory: ***
[2025-10-13 06:51:11] total 398008
[2025-10-13 06:51:11] -rw-r--r--. 2 boincer umatlas 220967499 Oct 13 06:26 ATLAS.root_0
[2025-10-13 06:51:11] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 06:26 start_atlas.sh
[2025-10-13 06:51:11] -rw-r--r--. 2 boincer umatlas    569676 Oct 13 06:26 input.tar.gz
[2025-10-13 06:51:11] -rw-------. 1 boincer umatlas 185373478 Oct 13 06:50 HITS.pool.root.1
[2025-10-13 06:51:11] -rw-------. 1 boincer umatlas    614400 Oct 13 06:51 result.tar.gz
06:51:12 (3331910): run_atlas exited; CPU time 14295.928176
06:51:12 (3331910): called boinc_finish(0)

</stderr_txt>
]]>

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