Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
21:36:50 (2656519): wrapper (7.7.26015): starting
21:36:50 (2656519): wrapper: running run_atlas (--nthreads 2)
[2025-10-13 21:36:50] Arguments: --nthreads 2
[2025-10-13 21:36:50] Threads: 2
[2025-10-13 21:36:50] Checking for CVMFS
[2025-10-13 21:36:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 21:36:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 21:36:50] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 21:36:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 21:36:50] 2.9.2.0 1210534 6183 58896 151671 2 57 28347886 36864000 0 130560 0 3791336 99.989 208681 775 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 21:36:50] CVMFS is ok
[2025-10-13 21:36:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 21:36:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 21:36:50] Further information can be found at the LHC@home message board.
[2025-10-13 21:36:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 21:36:50] Checking for apptainer binary...
[2025-10-13 21:36:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 21:36:50] Running /usr/bin/apptainer --version
[2025-10-13 21:36:50] apptainer version 1.4.1-1.1
[2025-10-13 21:36:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 21:36:51] thA369
[2025-10-13 21:36:51] apptainer works
[2025-10-13 21:36:51] Set ATHENA_PROC_NUMBER=2
[2025-10-13 21:36:51] Set ATHENA_CORE_NUMBER=2
[2025-10-13 21:36:51] Starting ATLAS job with PandaID=6842804182
[2025-10-13 21:36:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 23:41:42]  *** The last 200 lines of the pilot log: ***
[2025-10-13 23:41:42] 2025-10-13 21:41:11,942 | INFO     | executing command: cat /etc/os-release
[2025-10-13 23:41:42] 2025-10-13 21:41:11,962 | INFO     | cat /etc/os-release:
[2025-10-13 23:41:42] NAME="CentOS Linux"
[2025-10-13 23:41:42] VERSION="7 (Core)"
[2025-10-13 23:41:42] ID="centos"
[2025-10-13 23:41:42] ID_LIKE="rhel fedora"
[2025-10-13 23:41:42] VERSION_ID="7"
[2025-10-13 23:41:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 23:41:42] ANSI_COLOR="0;31"
[2025-10-13 23:41:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 23:41:42] HOME_URL="https://www.centos.org/"
[2025-10-13 23:41:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 23:41:42] 
[2025-10-13 23:41:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 23:41:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 23:41:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 23:41:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 23:41:42] 
[2025-10-13 23:41:42] 2025-10-13 21:41:11,962 | INFO     | ***************************************
[2025-10-13 23:41:42] 2025-10-13 21:41:12,464 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 23:41:42] 2025-10-13 21:41:12,476 | INFO     | sufficient remaining disk space (333276250112 B)
[2025-10-13 23:41:42] 2025-10-13 21:41:12,476 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 23:41:42] 2025-10-13 21:41:12,477 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 23:41:42] 2025-10-13 21:41:12,477 | INFO     | update_server=False
[2025-10-13 23:41:42] 2025-10-13 21:41:12,477 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 23:41:42] 2025-10-13 21:41:12,477 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 23:41:42] 2025-10-13 21:41:12,477 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 23:41:42] 2025-10-13 21:41:12,477 | INFO     | aborting loop
[2025-10-13 23:41:42] 2025-10-13 21:41:13,204 | INFO     | all job control threads have been joined
[2025-10-13 23:41:42] 2025-10-13 21:41:13,269 | INFO     | all data control threads have been joined
[2025-10-13 23:41:42] 2025-10-13 21:41:13,405 | INFO     | all payload control threads have been joined
[2025-10-13 23:41:42] 2025-10-13 21:41:13,482 | INFO     | [job] queue monitor thread has finished
[2025-10-13 23:41:42] 2025-10-13 21:41:13,483 | INFO     | [job] job monitor thread has finished
[2025-10-13 23:41:42] 2025-10-13 21:41:13,483 | INFO     | [job] retrieve thread has finished
[2025-10-13 23:41:42] 2025-10-13 21:41:13,744 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 23:41:42] 2025-10-13 21:41:13,906 | INFO     | [data] copytool_in thread has finished
[2025-10-13 23:41:42] 2025-10-13 21:41:14,125 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 23:41:42] 2025-10-13 21:41:14,163 | INFO     | [payload] failed_post thread has finished
[2025-10-13 23:41:42] 2025-10-13 21:41:14,210 | INFO     | [job] control thread has finished
[2025-10-13 23:41:42] 2025-10-13 21:41:14,219 | INFO     | [monitor] cgroup control has ended
[2025-10-13 23:41:42] 2025-10-13 21:41:14,274 | INFO     | [data] control thread has finished
[2025-10-13 23:41:42] 2025-10-13 21:41:14,411 | INFO     | [payload] control thread has finished
[2025-10-13 23:41:42] 2025-10-13 21:41:14,580 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 23:41:42] 2025-10-13 21:41:14,581 | INFO     | [job] validate thread has finished
[2025-10-13 23:41:42] 2025-10-13 21:41:14,606 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 23:41:42] 2025-10-13 21:41:14,701 | INFO     | [payload] validate_post thread has finished
[2025-10-13 23:41:42] 2025-10-13 21:41:14,935 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 23:41:42] 2025-10-13 21:41:15,443 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 23:41:42] 2025-10-13 21:41:15,751 | INFO     | [data] copytool_out thread has finished
[2025-10-13 23:41:42] 2025-10-13 21:41:19,451 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 23:41:42] 2025-10-13 21:41:19,608 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139702310418240)>', '<ExcThread(monitor, started 139701411354368)>']
[2025-10-13 23:41:42] 2025-10-13 21:41:24,631 | INFO     | all workflow threads have been joined
[2025-10-13 23:41:42] 2025-10-13 21:41:24,632 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 23:41:42] 2025-10-13 21:41:24,632 | INFO     | traces error code: 0
[2025-10-13 23:41:42] 2025-10-13 21:41:24,632 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 23:41:42] 2025-10-13 21:41:41,994 | INFO     | PID=2660229 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 23:41:42] 2025-10-13 21:41:41,994 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 23:41:42] 2025-10-13 21:41:41,994 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 23:41:42] 2025-10-13 21:41:41,994 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 23:41:42] 2025-10-13 21:41:41,994 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 23:41:42] 2025-10-13 21:41:41,995 | INFO     | [monitor] control thread has ended
[2025-10-13 23:41:42] 2025-10-13 21:41:42,034 [wrapper] ==== pilot stdout END ====
[2025-10-13 23:41:42] 2025-10-13 21:41:42,037 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 23:41:42] 2025-10-13 21:41:42,039 [wrapper] pilotpid: 2660229
[2025-10-13 23:41:42] 2025-10-13 21:41:42,042 [wrapper] Pilot exit status: 0
[2025-10-13 23:41:42] 2025-10-13 21:41:42,047 [wrapper] pandaids: 6842804182
[2025-10-13 23:41:42] 2025-10-13 21:41:42,059 [wrapper] cleanup supervisor_pilot 2680888 2660230
[2025-10-13 23:41:42] 2025-10-13 21:41:42,061 [wrapper] Test setup, not cleaning
[2025-10-13 23:41:42] 2025-10-13 21:41:42,064 [wrapper] apfmon messages muted
[2025-10-13 23:41:42] 2025-10-13 21:41:42,066 [wrapper] ==== wrapper stdout END ====
[2025-10-13 23:41:42] 2025-10-13 21:41:42,068 [wrapper] ==== wrapper stderr END ====
[2025-10-13 23:41:42]  *** Error codes and diagnostics ***
[2025-10-13 23:41:42]     "exeErrorCode": 0,
[2025-10-13 23:41:42]     "exeErrorDiag": "",
[2025-10-13 23:41:42]     "pilotErrorCode": 0,
[2025-10-13 23:41:42]     "pilotErrorDiag": "",
[2025-10-13 23:41:42]  *** Listing of results directory ***
[2025-10-13 23:41:42] total 410496
[2025-10-13 23:41:42] -rw-r--r-- 1 boinc boinc    557409 Oct 13 11:31 pilot3.tar.gz
[2025-10-13 23:41:42] -rw-r--r-- 1 boinc boinc      5112 Oct 13 12:14 queuedata.json
[2025-10-13 23:41:42] -rwx------ 1 boinc boinc     36292 Oct 13 12:15 runpilot2-wrapper.sh
[2025-10-13 23:41:42] -rw-r--r-- 1 boinc boinc       100 Oct 13 21:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 23:41:42] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 21:36 run_atlas
[2025-10-13 23:41:42] -rw-r--r-- 1 boinc boinc       105 Oct 13 21:36 job.xml
[2025-10-13 23:41:42] -rw-r--r-- 2 boinc boinc 219863127 Oct 13 21:36 EVNT.46676267._004706.pool.root.1
[2025-10-13 23:41:42] -rw-r--r-- 2 boinc boinc    569686 Oct 13 21:36 input.tar.gz
[2025-10-13 23:41:42] -rw-r--r-- 2 boinc boinc     15120 Oct 13 21:36 start_atlas.sh
[2025-10-13 23:41:42] drwxrwx--x 2 boinc boinc      4096 Oct 13 21:36 shared
[2025-10-13 23:41:42] -rw-r--r-- 1 boinc boinc         0 Oct 13 21:36 boinc_setup_complete
[2025-10-13 23:41:42] -rw-r--r-- 1 boinc boinc      6206 Oct 13 21:36 init_data.xml
[2025-10-13 23:41:42] -rw-r--r-- 1 boinc boinc         0 Oct 13 21:36 boinc_lockfile
[2025-10-13 23:41:42] -rw-r--r-- 1 boinc boinc      2549 Oct 13 21:36 pandaJob.out
[2025-10-13 23:41:42] -rw------- 1 boinc boinc    972799 Oct 13 21:37 agis_schedconf.cvmfs.json
[2025-10-13 23:41:42] -rw------- 1 boinc boinc   1560580 Oct 13 21:37 agis_ddmendpoints.agis.ALL.json
[2025-10-13 23:41:42] drwx------ 5 boinc boinc      4096 Oct 13 21:37 pilot3
[2025-10-13 23:41:42] -rw------- 1 boinc boinc 193875871 Oct 13 23:40 HITS.46676269._096648.pool.root.1
[2025-10-13 23:41:42] -rw-r--r-- 1 boinc boinc       529 Oct 13 23:40 boinc_task_state.xml
[2025-10-13 23:41:42] -rw------- 1 boinc boinc      1013 Oct 13 23:40 memory_monitor_summary.json
[2025-10-13 23:41:42] -rw------- 1 boinc boinc    288956 Oct 13 23:41 log.46676269._096648.job.log.tgz.1
[2025-10-13 23:41:42] -rw------- 1 boinc boinc      7754 Oct 13 23:41 heartbeat.json
[2025-10-13 23:41:42] -rw-r--r-- 1 boinc boinc      8192 Oct 13 23:41 boinc_mmap_file
[2025-10-13 23:41:42] -rw-r--r-- 1 boinc boinc        27 Oct 13 23:41 wrapper_checkpoint.txt
[2025-10-13 23:41:42] -rw------- 1 boinc boinc       747 Oct 13 23:41 pilotlog.txt
[2025-10-13 23:41:42] -rw------- 1 boinc boinc        95 Oct 13 23:41 pilot_heartbeat.json
[2025-10-13 23:41:42] -rw------- 1 boinc boinc   1074607 Oct 13 23:41 log.46676269._096648.job.log.1
[2025-10-13 23:41:42] -rw------- 1 boinc boinc       357 Oct 13 23:41 output.list
[2025-10-13 23:41:42] -rw-r--r-- 1 boinc boinc       620 Oct 13 23:41 runtime_log
[2025-10-13 23:41:42] -rw------- 1 boinc boinc   1382400 Oct 13 23:41 result.tar.gz
[2025-10-13 23:41:42] -rw-r--r-- 1 boinc boinc      8777 Oct 13 23:41 runtime_log.err
[2025-10-13 23:41:42] -rw------- 1 boinc boinc       659 Oct 13 23:41 Y6SNDmZlUS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmgjVMDmSfy2pn.diag
[2025-10-13 23:41:42] -rw-r--r-- 1 boinc boinc      8884 Oct 13 23:41 stderr.txt
[2025-10-13 23:41:42] HITS file was successfully produced:
[2025-10-13 23:41:42] -rw------- 1 boinc boinc 193875871 Oct 13 23:40 shared/HITS.pool.root.1
[2025-10-13 23:41:42]  *** Contents of shared directory: ***
[2025-10-13 23:41:42] total 405976
[2025-10-13 23:41:42] -rw-r--r-- 2 boinc boinc 219863127 Oct 13 21:36 ATLAS.root_0
[2025-10-13 23:41:42] -rw-r--r-- 2 boinc boinc    569686 Oct 13 21:36 input.tar.gz
[2025-10-13 23:41:42] -rw-r--r-- 2 boinc boinc     15120 Oct 13 21:36 start_atlas.sh
[2025-10-13 23:41:42] -rw------- 1 boinc boinc 193875871 Oct 13 23:40 HITS.pool.root.1
[2025-10-13 23:41:42] -rw------- 1 boinc boinc   1382400 Oct 13 23:41 result.tar.gz
23:41:43 (2656519): run_atlas exited; CPU time 14501.290134
23:41:43 (2656519): called boinc_finish(0)

</stderr_txt>
]]>

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