Stderr output

<core_client_version>7.24.5</core_client_version>
<![CDATA[
<stderr_txt>
04:14:26 (3751843): wrapper (7.7.26015): starting
04:14:26 (3751843): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 05:42:51] Arguments: --nthreads 4
[2025-10-13 05:42:51] Threads: 4
[2025-10-13 05:42:51] Checking for CVMFS
[2025-10-13 05:42:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 05:42:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 05:42:51] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 05:42:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 05:42:51] 2.13.2.0 314650 3818 51388 151657 0 56 2175563 4096000 1834 130560 0 8395110 99.919 798164 916 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-13 05:42:51] CVMFS is ok
[2025-10-13 05:42:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 05:42:51] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-13 05:42:51] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-13 05:42:51] Further information can be found at the LHC@home message board.
[2025-10-13 05:42:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 05:42:51] Checking for apptainer binary...
[2025-10-13 05:42:51] apptainer is not installed, using version from CVMFS
[2025-10-13 05:42:51] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 05:42:51] X670EPG
[2025-10-13 05:42:51] apptainer works
[2025-10-13 05:42:51] Set ATHENA_PROC_NUMBER=4
[2025-10-13 05:42:51] Set ATHENA_CORE_NUMBER=4
[2025-10-13 05:42:51] Starting ATLAS job with PandaID=6842756989
[2025-10-13 05:42:51] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/home/x670epg/boinc3/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 05:42:51]  *** The last 200 lines of the pilot log: ***
[2025-10-13 05:42:51]  status_code=0
[2025-10-13 05:42:51]  storage_token=
[2025-10-13 05:42:51]  surl=/home/x670epg/boinc3/slots/0/PanDA_Pilot-6842756989/log.46676269._096544.job.log.tgz.1
[2025-10-13 05:42:51]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/43/dd/log.46676269._096544.job.log.tgz.1
[2025-10-13 05:42:51]  workdir=None
[2025-10-13 05:42:51] ]
[2025-10-13 05:42:51] 2025-10-13 11:42:03,490 | INFO     | transferring file log.46676269._096544.job.log.tgz.1 from /home/x670epg/boinc3/slots/0/PanDA_Pilot-6842756989/log.46676269._096544.job.log.tgz.1 to /home/x670epg/b
[2025-10-13 05:42:51] 2025-10-13 11:42:03,490 | INFO     | executing command: /usr/bin/env mv /home/x670epg/boinc3/slots/0/PanDA_Pilot-6842756989/log.46676269._096544.job.log.tgz.1 /home/x670epg/boinc3/slots/0/log.46676269
[2025-10-13 05:42:51] 2025-10-13 11:42:03,504 | INFO     | adding to output.list: log.46676269._096544.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/43/dd/log.46676269._096544.job.log.tg
[2025-10-13 05:42:51] 2025-10-13 11:42:03,505 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 05:42:51] 2025-10-13 11:42:03,505 | INFO     | summary of transferred files:
[2025-10-13 05:42:51] 2025-10-13 11:42:03,505 | INFO     |  -- lfn=log.46676269._096544.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 05:42:51] 2025-10-13 11:42:03,505 | INFO     | stage-out finished correctly
[2025-10-13 05:42:51] 2025-10-13 11:42:03,612 | INFO     | PID=3755680 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 05:42:51] 2025-10-13 11:42:03,612 | INFO     | .. there are 2 such processes running
[2025-10-13 05:42:51] 2025-10-13 11:42:04,368 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 05:42:51] 2025-10-13 11:42:04,612 | INFO     | time since job start (5248s) is within the limit (172800.0s)
[2025-10-13 05:42:51] 2025-10-13 11:42:05,384 | INFO     | job 6842756989 has state=finished
[2025-10-13 05:42:51] 2025-10-13 11:42:05,384 | INFO     | preparing for final server update for job 6842756989 in state='finished'
[2025-10-13 05:42:51] 2025-10-13 11:42:05,384 | INFO     | this job has now completed (state=finished)
[2025-10-13 05:42:51] 2025-10-13 11:42:05,385 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 05:42:51] 2025-10-13 11:42:05,385 | INFO     | log transfer has been attempted: DONE
[2025-10-13 05:42:51] 2025-10-13 11:42:05,385 | INFO     | job 6842756989 has finished - writing final server update
[2025-10-13 05:42:51] 2025-10-13 11:42:05,385 | INFO     | total number of processed events: 400 (read)
[2025-10-13 05:42:51] 2025-10-13 11:42:05,385 | INFO     | executing command: lscpu
[2025-10-13 05:42:51] 2025-10-13 11:42:05,412 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 05:42:51] 2025-10-13 11:42:05,693 | INFO     | monitor loop #402: job 0:6842756989 is in state 'finished'
[2025-10-13 05:42:51] 2025-10-13 11:42:05,693 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 05:42:51] 2025-10-13 11:42:06,617 | INFO     | time since job start (5250s) is within the limit (172800.0s)
[2025-10-13 05:42:51] 2025-10-13 11:42:08,196 | INFO     | monitor loop #403: job 0:6842756989 is in state 'finished'
[2025-10-13 05:42:51] 2025-10-13 11:42:08,196 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 05:42:51] 2025-10-13 11:42:08,623 | INFO     | time since job start (5252s) is within the limit (172800.0s)
[2025-10-13 05:42:51] 2025-10-13 11:42:10,628 | INFO     | time since job start (5254s) is within the limit (172800.0s)
[2025-10-13 05:42:51] 2025-10-13 11:42:10,699 | INFO     | monitor loop #404: job 0:6842756989 is in state 'finished'
[2025-10-13 05:42:51] 2025-10-13 11:42:10,699 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 05:42:51] 2025-10-13 11:42:12,206 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-13 05:42:51] 2025-10-13 11:42:12,208 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 4705.282875
[2025-10-13 05:42:51] 2025-10-13 11:42:12,211 | INFO     | using path: /home/x670epg/boinc3/slots/0/PanDA_Pilot-6842756989/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 05:42:51] 2025-10-13 11:42:12,211 | INFO     | extracted standard info from prmon json
[2025-10-13 05:42:51] 2025-10-13 11:42:12,211 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 05:42:51] 2025-10-13 11:42:12,212 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 05:42:51] 2025-10-13 11:42:12,212 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 05:42:51] 2025-10-13 11:42:12,212 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 05:42:51] 2025-10-13 11:42:12,213 | INFO     | fitting pss+swap vs Time
[2025-10-13 05:42:51] 2025-10-13 11:42:12,213 | INFO     | sum of square deviations: 152858680.0
[2025-10-13 05:42:51] 2025-10-13 11:42:12,213 | INFO     | sum of deviations: -13264616163.999998
[2025-10-13 05:42:51] 2025-10-13 11:42:12,213 | INFO     | mean x: 1760353181.0
[2025-10-13 05:42:51] 2025-10-13 11:42:12,213 | INFO     | mean y: 2493713.0506329113
[2025-10-13 05:42:51] 2025-10-13 11:42:12,213 | INFO     | -- intersect: 152760644307.05954
[2025-10-13 05:42:51] 2025-10-13 11:42:12,213 | INFO     | intersect: 152760644307.05954
[2025-10-13 05:42:51] 2025-10-13 11:42:12,213 | INFO     | chi2: 0.04717737747293209
[2025-10-13 05:42:51] 2025-10-13 11:42:12,213 | INFO     | -- intersect: 152760644307.05954
[2025-10-13 05:42:51] 2025-10-13 11:42:12,213 | INFO     | current memory leak: -86.78 B/s (using 79 data points, chi2=0.05)
[2025-10-13 05:42:51] 2025-10-13 11:42:12,214 | INFO     | could have reported an average CPU frequency of 4737 MHz (6 samples)
[2025-10-13 05:42:51] 2025-10-13 11:42:12,214 | INFO     | ..............................
[2025-10-13 05:42:51] 2025-10-13 11:42:12,214 | INFO     | . Timing measurements:
[2025-10-13 05:42:51] 2025-10-13 11:42:12,214 | INFO     | . get job = 0 s
[2025-10-13 05:42:51] 2025-10-13 11:42:12,214 | INFO     | . initial setup = 3 s
[2025-10-13 05:42:51] 2025-10-13 11:42:12,214 | INFO     | . payload setup = 4 s
[2025-10-13 05:42:51] 2025-10-13 11:42:12,214 | INFO     | . stage-in = 0 s
[2025-10-13 05:42:51] 2025-10-13 11:42:12,214 | INFO     | . payload execution = 5225 s
[2025-10-13 05:42:51] 2025-10-13 11:42:12,214 | INFO     | . stage-out = 0 s
[2025-10-13 05:42:51] 2025-10-13 11:42:12,214 | INFO     | . log creation = 0 s
[2025-10-13 05:42:51] 2025-10-13 11:42:12,214 | INFO     | ..............................
[2025-10-13 05:42:51] 2025-10-13 11:42:12,250 | INFO     | 
[2025-10-13 05:42:51] 2025-10-13 11:42:12,250 | INFO     | job summary report
[2025-10-13 05:42:51] 2025-10-13 11:42:12,250 | INFO     | --------------------------------------------------
[2025-10-13 05:42:51] 2025-10-13 11:42:12,250 | INFO     | PanDA job id: 6842756989
[2025-10-13 05:42:51] 2025-10-13 11:42:12,250 | INFO     | task id: 46676269
[2025-10-13 05:42:51] 2025-10-13 11:42:12,250 | INFO     | errors: (none)
[2025-10-13 05:42:51] 2025-10-13 11:42:12,250 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 05:42:51] 2025-10-13 11:42:12,250 | INFO     | pilot state: finished 
[2025-10-13 05:42:51] 2025-10-13 11:42:12,250 | INFO     | transexitcode: 0
[2025-10-13 05:42:51] 2025-10-13 11:42:12,250 | INFO     | exeerrorcode: 0
[2025-10-13 05:42:51] 2025-10-13 11:42:12,250 | INFO     | exeerrordiag: 
[2025-10-13 05:42:51] 2025-10-13 11:42:12,250 | INFO     | exitcode: 0
[2025-10-13 05:42:51] 2025-10-13 11:42:12,250 | INFO     | exitmsg: OK
[2025-10-13 05:42:51] 2025-10-13 11:42:12,250 | INFO     | cpuconsumptiontime: 20370 s
[2025-10-13 05:42:51] 2025-10-13 11:42:12,250 | INFO     | nevents: 400
[2025-10-13 05:42:51] 2025-10-13 11:42:12,250 | INFO     | neventsw: 0
[2025-10-13 05:42:51] 2025-10-13 11:42:12,250 | INFO     | pid: 3762327
[2025-10-13 05:42:51] 2025-10-13 11:42:12,250 | INFO     | pgrp: 3762327
[2025-10-13 05:42:51] 2025-10-13 11:42:12,250 | INFO     | corecount: 4
[2025-10-13 05:42:51] 2025-10-13 11:42:12,250 | INFO     | event service: False
[2025-10-13 05:42:51] 2025-10-13 11:42:12,250 | INFO     | sizes: {0: 2348762, 3: 2349024, 11: 2349052, 5233: 2384672, 5234: 2384672, 5242: 2384866}
[2025-10-13 05:42:51] 2025-10-13 11:42:12,250 | INFO     | --------------------------------------------------
[2025-10-13 05:42:51] 2025-10-13 11:42:12,250 | INFO     | 
[2025-10-13 05:42:51] 2025-10-13 11:42:12,251 | INFO     | executing command: ls -lF /home/x670epg/boinc3/slots/0
[2025-10-13 05:42:51] 2025-10-13 11:42:12,266 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 05:42:51] 2025-10-13 11:42:12,266 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 05:42:51] 2025-10-13 11:42:12,266 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 05:42:51] 2025-10-13 11:42:12,266 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 05:42:51] 2025-10-13 11:42:12,266 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 05:42:51] 2025-10-13 11:42:12,266 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 05:42:51] 2025-10-13 11:42:12,266 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 05:42:51] 2025-10-13 11:42:12,266 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 05:42:51] 2025-10-13 11:42:12,266 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 05:42:51] 2025-10-13 11:42:12,266 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 05:42:51] 2025-10-13 11:42:12,266 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 05:42:51] 2025-10-13 11:42:12,266 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 05:42:51] 2025-10-13 11:42:12,266 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 05:42:51] 2025-10-13 11:42:12,266 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 05:42:51] 2025-10-13 11:42:12,266 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 05:42:51] 2025-10-13 11:42:12,266 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 05:42:51] 2025-10-13 11:42:12,266 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 05:42:51] 2025-10-13 11:42:12,266 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 05:42:51] 2025-10-13 11:42:12,266 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 05:42:51] 2025-10-13 11:42:12,266 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 05:42:51] 2025-10-13 11:42:12,266 | INFO     | job 6842756989 has completed (purged errors)
[2025-10-13 05:42:51] 2025-10-13 11:42:12,267 | INFO     | overall cleanup function is called
[2025-10-13 05:42:51] 2025-10-13 11:42:13,273 | INFO     | --- collectZombieJob: --- 10, [3762327]
[2025-10-13 05:42:51] 2025-10-13 11:42:13,273 | INFO     | zombie collector waiting for pid 3762327
[2025-10-13 05:42:51] 2025-10-13 11:42:13,273 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 05:42:51] 2025-10-13 11:42:13,273 | INFO     | collected zombie processes
[2025-10-13 05:42:51] 2025-10-13 11:42:13,273 | INFO     | will attempt to kill all subprocesses of pid=3762327
[2025-10-13 05:42:51] 2025-10-13 11:42:13,359 | INFO     | process IDs to be killed: [3762327] (in reverse order)
[2025-10-13 05:42:51] 2025-10-13 11:42:13,427 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 05:42:51] 2025-10-13 11:42:13,427 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 05:42:51] 2025-10-13 11:42:13,431 | INFO     | did not find any defunct processes belonging to 3762327
[2025-10-13 05:42:51] 2025-10-13 11:42:13,436 | INFO     | did not find any defunct processes belonging to 3762327
[2025-10-13 05:42:51] 2025-10-13 11:42:13,436 | INFO     | ready for new job
[2025-10-13 05:42:51] 2025-10-13 11:42:13,436 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 05:42:51] 2025-10-13 11:42:13,437 | INFO     | ***************************************
[2025-10-13 05:42:51] 2025-10-13 11:42:13,438 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 05:42:51] 2025-10-13 11:42:13,438 | INFO     | ***************************************
[2025-10-13 05:42:51] 2025-10-13 11:42:13,438 | INFO     | 
[2025-10-13 05:42:51] 2025-10-13 11:42:13,439 | INFO     | architecture information:
[2025-10-13 05:42:51] 2025-10-13 11:42:13,439 | INFO     | executing command: cat /etc/os-release
[2025-10-13 05:42:51] 2025-10-13 11:42:13,452 | INFO     | cat /etc/os-release:
[2025-10-13 05:42:51] NAME="CentOS Linux"
[2025-10-13 05:42:51] VERSION="7 (Core)"
[2025-10-13 05:42:51] ID="centos"
[2025-10-13 05:42:51] ID_LIKE="rhel fedora"
[2025-10-13 05:42:51] VERSION_ID="7"
[2025-10-13 05:42:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 05:42:51] ANSI_COLOR="0;31"
[2025-10-13 05:42:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 05:42:51] HOME_URL="https://www.centos.org/"
[2025-10-13 05:42:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 05:42:51] 
[2025-10-13 05:42:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 05:42:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 05:42:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 05:42:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 05:42:51] 
[2025-10-13 05:42:51] 2025-10-13 11:42:13,452 | INFO     | ***************************************
[2025-10-13 05:42:51] 2025-10-13 11:42:13,955 | INFO     | executing command: df -mP /home/x670epg/boinc3/slots/0
[2025-10-13 05:42:51] 2025-10-13 11:42:13,964 | INFO     | sufficient remaining disk space (416262651904 B)
[2025-10-13 05:42:51] 2025-10-13 11:42:13,965 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 05:42:51] 2025-10-13 11:42:13,965 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 05:42:51] 2025-10-13 11:42:13,965 | INFO     | update_server=False
[2025-10-13 05:42:51] 2025-10-13 11:42:13,965 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 05:42:51] 2025-10-13 11:42:13,965 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:42:51] 2025-10-13 11:42:14,041 | INFO     | all data control threads have been joined
[2025-10-13 05:42:51] 2025-10-13 11:42:14,055 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 05:42:51] 2025-10-13 11:42:14,182 | INFO     | all payload control threads have been joined
[2025-10-13 05:42:51] 2025-10-13 11:42:14,207 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:42:51] 2025-10-13 11:42:14,207 | INFO     | aborting loop
[2025-10-13 05:42:51] 2025-10-13 11:42:14,917 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 05:42:51] 2025-10-13 11:42:14,970 | INFO     | [job] queue monitor thread has finished
[2025-10-13 05:42:51] 2025-10-13 11:42:14,970 | INFO     | all job control threads have been joined
[2025-10-13 05:42:51] 2025-10-13 11:42:14,971 | INFO     | [job] retrieve thread has finished
[2025-10-13 05:42:51] 2025-10-13 11:42:15,046 | INFO     | [data] control thread has finished
[2025-10-13 05:42:51] 2025-10-13 11:42:15,187 | INFO     | [payload] control thread has finished
[2025-10-13 05:42:51] 2025-10-13 11:42:15,212 | INFO     | [job] job monitor thread has finished
[2025-10-13 05:42:51] 2025-10-13 11:42:15,333 | INFO     | [payload] validate_post thread has finished
[2025-10-13 05:42:51] 2025-10-13 11:42:15,504 | INFO     | [job] validate thread has finished
[2025-10-13 05:42:51] 2025-10-13 11:42:15,652 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 05:42:51] 2025-10-13 11:42:15,699 | INFO     | [data] copytool_in thread has finished
[2025-10-13 05:42:51] 2025-10-13 11:42:15,722 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 05:42:51] 2025-10-13 11:42:15,865 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 05:42:51] 2025-10-13 11:42:15,975 | INFO     | [job] control thread has finished
[2025-10-13 05:42:51] 2025-10-13 11:42:16,060 | INFO     | [data] copytool_out thread has finished
[2025-10-13 05:42:51] 2025-10-13 11:42:16,357 | INFO     | [payload] failed_post thread has finished
[2025-10-13 05:42:51] 2025-10-13 11:42:18,923 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 05:42:51] 2025-10-13 11:42:24,026 | INFO     | job.realtimelogging is not enabled
[2025-10-13 05:42:51] 2025-10-13 11:42:25,031 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 05:42:51] 2025-10-13 11:42:43,777 | INFO     | PID=3755680 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 05:42:51] 2025-10-13 11:42:43,777 | INFO     | .. there are 2 such processes running
[2025-10-13 05:42:51] 2025-10-13 11:42:43,777 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 05:42:51] 2025-10-13 11:42:43,777 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 05:42:51] 2025-10-13 11:42:43,777 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 05:42:51] 2025-10-13 11:42:44,169 | INFO     | [monitor] cgroup control has ended
[2025-10-13 05:42:51] 2025-10-13 11:42:45,261 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 129090752636736)>', '<ExcThread(monitor, started 129090386396928)>']
[2025-10-13 05:42:51] 2025-10-13 11:42:45,787 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 05:42:51] 2025-10-13 11:42:45,787 | INFO     | [monitor] control thread has ended
[2025-10-13 05:42:51] 2025-10-13 11:42:50,286 | INFO     | all workflow threads have been joined
[2025-10-13 05:42:51] 2025-10-13 11:42:50,286 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 05:42:51] 2025-10-13 11:42:50,287 | INFO     | traces error code: 0
[2025-10-13 05:42:51] 2025-10-13 11:42:50,287 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 05:42:51] 2025-10-13 11:42:50,519 [wrapper] ==== pilot stdout END ====
[2025-10-13 05:42:51] 2025-10-13 11:42:50,522 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 05:42:51] 2025-10-13 11:42:50,525 [wrapper] pilotpid: 3755680
[2025-10-13 05:42:51] 2025-10-13 11:42:50,528 [wrapper] Pilot exit status: 0
[2025-10-13 05:42:51] 2025-10-13 11:42:50,540 [wrapper] pandaids: 6842756989
[2025-10-13 05:42:51] 2025-10-13 11:42:50,574 [wrapper] cleanup supervisor_pilot 3807427 3755681
[2025-10-13 05:42:51] 2025-10-13 11:42:50,578 [wrapper] Test setup, not cleaning
[2025-10-13 05:42:51] 2025-10-13 11:42:50,581 [wrapper] apfmon messages muted
[2025-10-13 05:42:51] 2025-10-13 11:42:50,589 [wrapper] ==== wrapper stdout END ====
[2025-10-13 05:42:51] 2025-10-13 11:42:50,592 [wrapper] ==== wrapper stderr END ====
[2025-10-13 05:42:51]  *** Error codes and diagnostics ***
[2025-10-13 05:42:51]     "exeErrorCode": 0,
[2025-10-13 05:42:51]     "exeErrorDiag": "",
[2025-10-13 05:42:51]     "pilotErrorCode": 0,
[2025-10-13 05:42:51]     "pilotErrorDiag": "",
[2025-10-13 05:42:51]  *** Listing of results directory ***
[2025-10-13 05:42:51] total 418312
[2025-10-13 05:42:51] -rw-r--r-- 1 x670epg x670epg    557409 Oct 13 03:05 pilot3.tar.gz
[2025-10-13 05:42:51] -rw-r--r-- 1 x670epg x670epg      5112 Oct 13 03:10 queuedata.json
[2025-10-13 05:42:51] -rwx------ 1 x670epg x670epg     36292 Oct 13 03:11 runpilot2-wrapper.sh
[2025-10-13 05:42:51] -rw-rw-r-- 1 x670epg x670epg       100 Oct 13 04:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 05:42:51] -rwxr-xr-x 1 x670epg x670epg      7986 Oct 13 04:14 run_atlas
[2025-10-13 05:42:51] -rw-rw-r-- 1 x670epg x670epg       105 Oct 13 04:14 job.xml
[2025-10-13 05:42:51] -rw-r--r-- 2 x670epg x670epg 220008501 Oct 13 04:14 EVNT.46676267._004608.pool.root.1
[2025-10-13 05:42:51] -rw-r--r-- 2 x670epg x670epg     15120 Oct 13 04:14 start_atlas.sh
[2025-10-13 05:42:51] drwxrwx--x 2 x670epg x670epg      4096 Oct 13 04:14 shared
[2025-10-13 05:42:51] -rw-r--r-- 2 x670epg x670epg    569682 Oct 13 04:14 input.tar.gz
[2025-10-13 05:42:51] -rw-rw-r-- 1 x670epg x670epg      9975 Oct 13 04:14 init_data.xml
[2025-10-13 05:42:51] -rw-rw-r-- 1 x670epg x670epg       112 Oct 13 04:14 stderr.txt
[2025-10-13 05:42:51] -rw-rw-r-- 1 x670epg x670epg         0 Oct 13 04:14 boinc_lockfile
[2025-10-13 05:42:51] -rw-rw-r-- 1 x670epg x670epg      2549 Oct 13 04:14 pandaJob.out
[2025-10-13 05:42:51] -rw------- 1 x670epg x670epg    972849 Oct 13 04:14 agis_schedconf.cvmfs.json
[2025-10-13 05:42:51] -rw------- 1 x670epg x670epg   1560580 Oct 13 04:14 agis_ddmendpoints.agis.ALL.json
[2025-10-13 05:42:51] drwx------ 5 x670epg x670epg      4096 Oct 13 04:14 pilot3
[2025-10-13 05:42:51] -rw-rw-r-- 1 x670epg x670epg       529 Oct 13 05:41 boinc_task_state.xml
[2025-10-13 05:42:51] -rw------- 1 x670epg x670epg 202318643 Oct 13 05:41 HITS.46676269._096544.pool.root.1
[2025-10-13 05:42:51] -rw------- 1 x670epg x670epg      1019 Oct 13 05:41 memory_monitor_summary.json
[2025-10-13 05:42:51] -rw------- 1 x670epg x670epg    278776 Oct 13 05:42 log.46676269._096544.job.log.tgz.1
[2025-10-13 05:42:51] -rw------- 1 x670epg x670epg        95 Oct 13 05:42 pilot_heartbeat.json
[2025-10-13 05:42:51] -rw------- 1 x670epg x670epg      7738 Oct 13 05:42 heartbeat.json
[2025-10-13 05:42:51] -rw-rw-r-- 1 x670epg x670epg      8192 Oct 13 05:42 boinc_mmap_file
[2025-10-13 05:42:51] -rw-rw-r-- 1 x670epg x670epg        27 Oct 13 05:42 wrapper_checkpoint.txt
[2025-10-13 05:42:51] -rw------- 1 x670epg x670epg      4902 Oct 13 05:42 pilotlog.txt
[2025-10-13 05:42:51] -rw------- 1 x670epg x670epg    790038 Oct 13 05:42 log.46676269._096544.job.log.1
[2025-10-13 05:42:51] -rw------- 1 x670epg x670epg       357 Oct 13 05:42 output.list
[2025-10-13 05:42:51] -rw-rw-r-- 1 x670epg x670epg       620 Oct 13 05:42 runtime_log
[2025-10-13 05:42:51] -rw------- 1 x670epg x670epg   1085440 Oct 13 05:42 result.tar.gz
[2025-10-13 05:42:51] -rw-rw-r-- 1 x670epg x670epg      8777 Oct 13 05:42 runtime_log.err
[2025-10-13 05:42:51] -rw------- 1 x670epg x670epg       655 Oct 13 05:42 jhMKDmclTS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm5jmNDmJ0fPAn.diag
[2025-10-13 05:42:51] HITS file was successfully produced:
[2025-10-13 05:42:51] -rw------- 1 x670epg x670epg 202318643 Oct 13 05:41 shared/HITS.pool.root.1
[2025-10-13 05:42:51]  *** Contents of shared directory: ***
[2025-10-13 05:42:51] total 414080
[2025-10-13 05:42:51] -rw-r--r-- 2 x670epg x670epg 220008501 Oct 13 04:14 ATLAS.root_0
[2025-10-13 05:42:51] -rw-r--r-- 2 x670epg x670epg     15120 Oct 13 04:14 start_atlas.sh
[2025-10-13 05:42:51] -rw-r--r-- 2 x670epg x670epg    569682 Oct 13 04:14 input.tar.gz
[2025-10-13 05:42:51] -rw------- 1 x670epg x670epg 202318643 Oct 13 05:41 HITS.pool.root.1
[2025-10-13 05:42:51] -rw------- 1 x670epg x670epg   1085440 Oct 13 05:42 result.tar.gz
05:42:51 (3751843): run_atlas exited; CPU time 20387.554606
05:42:51 (3751843): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN