Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:13:28 (3978): wrapper (7.7.26015): starting
06:13:28 (3978): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 06:13:28] Arguments: --nthreads 12
[2025-10-13 06:13:28] Threads: 12
[2025-10-13 06:13:28] Checking for CVMFS
[2025-10-13 06:13:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 06:13:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 06:13:28] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 06:13:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 06:13:29] 2.11.2.0 30551 54128 88296 151657 0 57 15375982 20275200 1 130560 0 31818700 99.959 2440336 39909 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 06:13:29] CVMFS is ok
[2025-10-13 06:13:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 06:13:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 06:13:29] Further information can be found at the LHC@home message board.
[2025-10-13 06:13:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 06:13:29] Checking for apptainer binary...
[2025-10-13 06:13:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 06:13:29] Running /usr/bin/apptainer --version
[2025-10-13 06:13:29] apptainer version 1.3.2-1.el7
[2025-10-13 06:13:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 06:13:30] c-205-16.aglt2.org
[2025-10-13 06:13:30] apptainer works
[2025-10-13 06:13:30] Set ATHENA_PROC_NUMBER=12
[2025-10-13 06:13:30] Set ATHENA_CORE_NUMBER=12
[2025-10-13 06:13:30] Starting ATLAS job with PandaID=6842801076
[2025-10-13 06:13:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 07:26:58]  *** The last 200 lines of the pilot log: ***
[2025-10-13 07:26:58]  status_code=0
[2025-10-13 07:26:58]  storage_token=
[2025-10-13 07:26:58]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6842801076/log.46676269._096644.job.log.tgz.1
[2025-10-13 07:26:58]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6c/c9/log.46676269._096644.job.log.tgz.1
[2025-10-13 07:26:58]  workdir=None
[2025-10-13 07:26:58] ]
[2025-10-13 07:26:58] 2025-10-13 11:25:54,590 | INFO     | transferring file log.46676269._096644.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6842801076/log.46676269._096644.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-13 07:26:58] 2025-10-13 11:25:54,590 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6842801076/log.46676269._096644.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._096644.job
[2025-10-13 07:26:58] 2025-10-13 11:25:54,611 | INFO     | adding to output.list: log.46676269._096644.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6c/c9/log.46676269._096644.job.log.tg
[2025-10-13 07:26:58] 2025-10-13 11:25:54,612 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 07:26:58] 2025-10-13 11:25:54,612 | INFO     | summary of transferred files:
[2025-10-13 07:26:58] 2025-10-13 11:25:54,613 | INFO     |  -- lfn=log.46676269._096644.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 07:26:58] 2025-10-13 11:25:54,613 | INFO     | stage-out finished correctly
[2025-10-13 07:26:58] 2025-10-13 11:25:54,973 | INFO     | time since job start (4328s) is within the limit (172800.0s)
[2025-10-13 07:26:58] 2025-10-13 11:25:56,240 | INFO     | monitor loop #322: job 0:6842801076 is in state 'finished'
[2025-10-13 07:26:58] 2025-10-13 11:25:56,240 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 07:26:58] 2025-10-13 11:25:56,978 | INFO     | time since job start (4330s) is within the limit (172800.0s)
[2025-10-13 07:26:58] 2025-10-13 11:25:57,732 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 07:26:58] 2025-10-13 11:25:58,744 | INFO     | monitor loop #323: job 0:6842801076 is in state 'finished'
[2025-10-13 07:26:58] 2025-10-13 11:25:58,744 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 07:26:58] 2025-10-13 11:25:58,984 | INFO     | time since job start (4332s) is within the limit (172800.0s)
[2025-10-13 07:26:58] 2025-10-13 11:26:00,154 | INFO     | job 6842801076 has state=finished
[2025-10-13 07:26:58] 2025-10-13 11:26:00,154 | INFO     | preparing for final server update for job 6842801076 in state='finished'
[2025-10-13 07:26:58] 2025-10-13 11:26:00,155 | INFO     | this job has now completed (state=finished)
[2025-10-13 07:26:58] 2025-10-13 11:26:00,156 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 07:26:58] 2025-10-13 11:26:00,156 | INFO     | log transfer has been attempted: DONE
[2025-10-13 07:26:58] 2025-10-13 11:26:00,156 | INFO     | job 6842801076 has finished - writing final server update
[2025-10-13 07:26:58] 2025-10-13 11:26:00,157 | INFO     | total number of processed events: 400 (read)
[2025-10-13 07:26:58] 2025-10-13 11:26:00,158 | INFO     | executing command: lscpu
[2025-10-13 07:26:58] 2025-10-13 11:26:00,186 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 07:26:58] 2025-10-13 11:26:00,989 | INFO     | time since job start (4334s) is within the limit (172800.0s)
[2025-10-13 07:26:58] 2025-10-13 11:26:01,247 | INFO     | monitor loop #324: job 0:6842801076 is in state 'finished'
[2025-10-13 07:26:58] 2025-10-13 11:26:01,247 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 07:26:58] 2025-10-13 11:26:02,995 | INFO     | time since job start (4336s) is within the limit (172800.0s)
[2025-10-13 07:26:58] 2025-10-13 11:26:03,750 | INFO     | monitor loop #325: job 0:6842801076 is in state 'finished'
[2025-10-13 07:26:58] 2025-10-13 11:26:03,752 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 07:26:58] 2025-10-13 11:26:05,000 | INFO     | time since job start (4339s) is within the limit (172800.0s)
[2025-10-13 07:26:58] 2025-10-13 11:26:05,006 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-13 07:26:58] 2025-10-13 11:26:05,010 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1706.9166666666667
[2025-10-13 07:26:58] 2025-10-13 11:26:05,013 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6842801076/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 07:26:58] 2025-10-13 11:26:05,014 | INFO     | extracted standard info from prmon json
[2025-10-13 07:26:58] 2025-10-13 11:26:05,014 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 07:26:58] 2025-10-13 11:26:05,014 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 07:26:58] 2025-10-13 11:26:05,014 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 07:26:58] 2025-10-13 11:26:05,015 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 07:26:58] 2025-10-13 11:26:05,016 | INFO     | fitting pss+swap vs Time
[2025-10-13 07:26:58] 2025-10-13 11:26:05,016 | INFO     | sum of square deviations: 81266640.0
[2025-10-13 07:26:58] 2025-10-13 11:26:05,017 | INFO     | sum of deviations: 171306635.5
[2025-10-13 07:26:58] 2025-10-13 11:26:05,017 | INFO     | mean x: 1760352681.5
[2025-10-13 07:26:58] 2025-10-13 11:26:05,017 | INFO     | mean y: 2699108.953125
[2025-10-13 07:26:58] 2025-10-13 11:26:05,017 | INFO     | -- intersect: -3708049793.193784
[2025-10-13 07:26:58] 2025-10-13 11:26:05,017 | INFO     | intersect: -3708049793.193784
[2025-10-13 07:26:58] 2025-10-13 11:26:05,017 | INFO     | chi2: 0.004219718801922894
[2025-10-13 07:26:58] 2025-10-13 11:26:05,018 | INFO     | -- intersect: -3708049793.193784
[2025-10-13 07:26:58] 2025-10-13 11:26:05,018 | INFO     | current memory leak: 2.11 B/s (using 64 data points, chi2=0.00)
[2025-10-13 07:26:58] 2025-10-13 11:26:05,018 | INFO     | could have reported an average CPU frequency of 2032 MHz (6 samples)
[2025-10-13 07:26:58] 2025-10-13 11:26:05,018 | INFO     | ..............................
[2025-10-13 07:26:58] 2025-10-13 11:26:05,018 | INFO     | . Timing measurements:
[2025-10-13 07:26:58] 2025-10-13 11:26:05,018 | INFO     | . get job = 0 s
[2025-10-13 07:26:58] 2025-10-13 11:26:05,019 | INFO     | . initial setup = 2 s
[2025-10-13 07:26:58] 2025-10-13 11:26:05,019 | INFO     | . payload setup = 7 s
[2025-10-13 07:26:58] 2025-10-13 11:26:05,019 | INFO     | . stage-in = 0 s
[2025-10-13 07:26:58] 2025-10-13 11:26:05,019 | INFO     | . payload execution = 4300 s
[2025-10-13 07:26:58] 2025-10-13 11:26:05,019 | INFO     | . stage-out = 0 s
[2025-10-13 07:26:58] 2025-10-13 11:26:05,019 | INFO     | . log creation = 0 s
[2025-10-13 07:26:58] 2025-10-13 11:26:05,019 | INFO     | ..............................
[2025-10-13 07:26:58] 2025-10-13 11:26:05,414 | INFO     | 
[2025-10-13 07:26:58] 2025-10-13 11:26:05,415 | INFO     | job summary report
[2025-10-13 07:26:58] 2025-10-13 11:26:05,415 | INFO     | --------------------------------------------------
[2025-10-13 07:26:58] 2025-10-13 11:26:05,415 | INFO     | PanDA job id: 6842801076
[2025-10-13 07:26:58] 2025-10-13 11:26:05,415 | INFO     | task id: 46676269
[2025-10-13 07:26:58] 2025-10-13 11:26:05,415 | INFO     | errors: (none)
[2025-10-13 07:26:58] 2025-10-13 11:26:05,415 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 07:26:58] 2025-10-13 11:26:05,415 | INFO     | pilot state: finished 
[2025-10-13 07:26:58] 2025-10-13 11:26:05,416 | INFO     | transexitcode: 0
[2025-10-13 07:26:58] 2025-10-13 11:26:05,416 | INFO     | exeerrorcode: 0
[2025-10-13 07:26:58] 2025-10-13 11:26:05,416 | INFO     | exeerrordiag: 
[2025-10-13 07:26:58] 2025-10-13 11:26:05,416 | INFO     | exitcode: 0
[2025-10-13 07:26:58] 2025-10-13 11:26:05,416 | INFO     | exitmsg: OK
[2025-10-13 07:26:58] 2025-10-13 11:26:05,416 | INFO     | cpuconsumptiontime: 47063 s
[2025-10-13 07:26:58] 2025-10-13 11:26:05,416 | INFO     | nevents: 400
[2025-10-13 07:26:58] 2025-10-13 11:26:05,416 | INFO     | neventsw: 0
[2025-10-13 07:26:58] 2025-10-13 11:26:05,416 | INFO     | pid: 14771
[2025-10-13 07:26:58] 2025-10-13 11:26:05,417 | INFO     | pgrp: 14771
[2025-10-13 07:26:58] 2025-10-13 11:26:05,417 | INFO     | corecount: 12
[2025-10-13 07:26:58] 2025-10-13 11:26:05,417 | INFO     | event service: False
[2025-10-13 07:26:58] 2025-10-13 11:26:05,417 | INFO     | sizes: {0: 2348635, 1: 2348834, 6: 2349096, 12: 2349124, 4312: 2375173, 4313: 2384171, 4316: 2384355, 4323: 2384549}
[2025-10-13 07:26:58] 2025-10-13 11:26:05,417 | INFO     | --------------------------------------------------
[2025-10-13 07:26:58] 2025-10-13 11:26:05,417 | INFO     | 
[2025-10-13 07:26:58] 2025-10-13 11:26:05,417 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 07:26:58] 2025-10-13 11:26:05,442 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 07:26:58] 2025-10-13 11:26:05,442 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 07:26:58] 2025-10-13 11:26:05,442 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 07:26:58] 2025-10-13 11:26:05,442 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 07:26:58] 2025-10-13 11:26:05,442 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 07:26:58] 2025-10-13 11:26:05,443 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 07:26:58] 2025-10-13 11:26:05,443 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 07:26:58] 2025-10-13 11:26:05,443 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 07:26:58] 2025-10-13 11:26:05,443 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 07:26:58] 2025-10-13 11:26:05,443 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 07:26:58] 2025-10-13 11:26:05,443 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 07:26:58] 2025-10-13 11:26:05,444 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 07:26:58] 2025-10-13 11:26:05,444 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 07:26:58] 2025-10-13 11:26:05,444 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 07:26:58] 2025-10-13 11:26:05,444 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 07:26:58] 2025-10-13 11:26:05,444 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 07:26:58] 2025-10-13 11:26:05,444 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 07:26:58] 2025-10-13 11:26:05,445 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 07:26:58] 2025-10-13 11:26:05,445 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 07:26:58] 2025-10-13 11:26:05,445 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 07:26:58] 2025-10-13 11:26:05,445 | INFO     | job 6842801076 has completed (purged errors)
[2025-10-13 07:26:58] 2025-10-13 11:26:05,445 | INFO     | overall cleanup function is called
[2025-10-13 07:26:58] 2025-10-13 11:26:06,454 | INFO     | --- collectZombieJob: --- 10, [14771]
[2025-10-13 07:26:58] 2025-10-13 11:26:06,454 | INFO     | zombie collector waiting for pid 14771
[2025-10-13 07:26:58] 2025-10-13 11:26:06,454 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 07:26:58] 2025-10-13 11:26:06,454 | INFO     | collected zombie processes
[2025-10-13 07:26:58] 2025-10-13 11:26:06,454 | INFO     | will attempt to kill all subprocesses of pid=14771
[2025-10-13 07:26:58] 2025-10-13 11:26:06,548 | INFO     | process IDs to be killed: [14771] (in reverse order)
[2025-10-13 07:26:58] 2025-10-13 11:26:06,600 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 07:26:58] 2025-10-13 11:26:06,601 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 07:26:58] 2025-10-13 11:26:06,604 | INFO     | did not find any defunct processes belonging to 14771
[2025-10-13 07:26:58] 2025-10-13 11:26:06,606 | INFO     | did not find any defunct processes belonging to 14771
[2025-10-13 07:26:58] 2025-10-13 11:26:06,607 | INFO     | ready for new job
[2025-10-13 07:26:58] 2025-10-13 11:26:06,607 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 07:26:58] 2025-10-13 11:26:06,608 | INFO     | ***************************************
[2025-10-13 07:26:58] 2025-10-13 11:26:06,608 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 07:26:58] 2025-10-13 11:26:06,609 | INFO     | ***************************************
[2025-10-13 07:26:58] 2025-10-13 11:26:06,609 | INFO     | 
[2025-10-13 07:26:58] 2025-10-13 11:26:06,609 | INFO     | architecture information:
[2025-10-13 07:26:58] 2025-10-13 11:26:06,610 | INFO     | executing command: cat /etc/os-release
[2025-10-13 07:26:58] 2025-10-13 11:26:06,625 | INFO     | cat /etc/os-release:
[2025-10-13 07:26:58] NAME="CentOS Linux"
[2025-10-13 07:26:58] VERSION="7 (Core)"
[2025-10-13 07:26:58] ID="centos"
[2025-10-13 07:26:58] ID_LIKE="rhel fedora"
[2025-10-13 07:26:58] VERSION_ID="7"
[2025-10-13 07:26:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 07:26:58] ANSI_COLOR="0;31"
[2025-10-13 07:26:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 07:26:58] HOME_URL="https://www.centos.org/"
[2025-10-13 07:26:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 07:26:58] 
[2025-10-13 07:26:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 07:26:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 07:26:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 07:26:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 07:26:58] 
[2025-10-13 07:26:58] 2025-10-13 11:26:06,626 | INFO     | ***************************************
[2025-10-13 07:26:58] 2025-10-13 11:26:07,129 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 07:26:58] 2025-10-13 11:26:07,146 | INFO     | sufficient remaining disk space (29503782912 B)
[2025-10-13 07:26:58] 2025-10-13 11:26:07,147 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 07:26:58] 2025-10-13 11:26:07,147 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 07:26:58] 2025-10-13 11:26:07,147 | INFO     | update_server=False
[2025-10-13 07:26:58] 2025-10-13 11:26:07,147 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 07:26:58] 2025-10-13 11:26:07,260 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:26:58] 2025-10-13 11:26:07,260 | INFO     | aborting loop
[2025-10-13 07:26:58] 2025-10-13 11:26:07,308 | INFO     | all data control threads have been joined
[2025-10-13 07:26:58] 2025-10-13 11:26:07,687 | INFO     | all payload control threads have been joined
[2025-10-13 07:26:58] 2025-10-13 11:26:07,718 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 07:26:58] 2025-10-13 11:26:08,153 | INFO     | [job] retrieve thread has finished
[2025-10-13 07:26:58] 2025-10-13 11:26:08,245 | INFO     | [job] validate thread has finished
[2025-10-13 07:26:58] 2025-10-13 11:26:08,252 | INFO     | [payload] failed_post thread has finished
[2025-10-13 07:26:58] 2025-10-13 11:26:08,268 | INFO     | [job] job monitor thread has finished
[2025-10-13 07:26:58] 2025-10-13 11:26:08,314 | INFO     | [data] control thread has finished
[2025-10-13 07:26:58] 2025-10-13 11:26:08,337 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 07:26:58] 2025-10-13 11:26:08,440 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 07:26:58] 2025-10-13 11:26:08,446 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 07:26:58] 2025-10-13 11:26:08,692 | INFO     | [payload] control thread has finished
[2025-10-13 07:26:58] 2025-10-13 11:26:08,801 | INFO     | all job control threads have been joined
[2025-10-13 07:26:58] 2025-10-13 11:26:08,940 | INFO     | [payload] validate_post thread has finished
[2025-10-13 07:26:58] 2025-10-13 11:26:09,273 | INFO     | [data] copytool_in thread has finished
[2025-10-13 07:26:58] 2025-10-13 11:26:09,454 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 07:26:58] 2025-10-13 11:26:09,632 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 07:26:58] 2025-10-13 11:26:09,723 | INFO     | [data] copytool_out thread has finished
[2025-10-13 07:26:58] 2025-10-13 11:26:09,806 | INFO     | [job] control thread has finished
[2025-10-13 07:26:58] 2025-10-13 11:26:10,116 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:26:58] 2025-10-13 11:26:11,121 | INFO     | [job] queue monitor thread has finished
[2025-10-13 07:26:58] 2025-10-13 11:26:12,343 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 07:26:58] 2025-10-13 11:26:38,212 | INFO     | PID=8128 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-13 07:26:58] 2025-10-13 11:26:38,212 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 07:26:58] 2025-10-13 11:26:38,213 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 07:26:58] 2025-10-13 11:26:38,213 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 07:26:58] 2025-10-13 11:26:52,471 | INFO     | [monitor] cgroup control has ended
[2025-10-13 07:26:58] 2025-10-13 11:26:53,477 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140387908650816)>', '<ExcThread(monitor, started 140387607881472)>']
[2025-10-13 07:26:58] 2025-10-13 11:26:54,294 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 07:26:58] 2025-10-13 11:26:54,295 | INFO     | [monitor] control thread has ended
[2025-10-13 07:26:58] 2025-10-13 11:26:58,482 | INFO     | all workflow threads have been joined
[2025-10-13 07:26:58] 2025-10-13 11:26:58,482 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 07:26:58] 2025-10-13 11:26:58,483 | INFO     | traces error code: 0
[2025-10-13 07:26:58] 2025-10-13 11:26:58,484 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 07:26:58] 2025-10-13 11:26:58,590 [wrapper] ==== pilot stdout END ====
[2025-10-13 07:26:58] 2025-10-13 11:26:58,594 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 07:26:58] 2025-10-13 11:26:58,598 [wrapper] pilotpid: 8128
[2025-10-13 07:26:58] 2025-10-13 11:26:58,602 [wrapper] Pilot exit status: 0
[2025-10-13 07:26:58] 2025-10-13 11:26:58,617 [wrapper] pandaids: 6842801076
[2025-10-13 07:26:58] 2025-10-13 11:26:58,664 [wrapper] cleanup supervisor_pilot 31285 8129
[2025-10-13 07:26:58] 2025-10-13 11:26:58,668 [wrapper] Test setup, not cleaning
[2025-10-13 07:26:58] 2025-10-13 11:26:58,672 [wrapper] apfmon messages muted
[2025-10-13 07:26:58] 2025-10-13 11:26:58,676 [wrapper] ==== wrapper stdout END ====
[2025-10-13 07:26:58] 2025-10-13 11:26:58,680 [wrapper] ==== wrapper stderr END ====
[2025-10-13 07:26:58]  *** Error codes and diagnostics ***
[2025-10-13 07:26:58]     "exeErrorCode": 0,
[2025-10-13 07:26:58]     "exeErrorDiag": "",
[2025-10-13 07:26:58]     "pilotErrorCode": 0,
[2025-10-13 07:26:58]     "pilotErrorDiag": "",
[2025-10-13 07:26:58]  *** Listing of results directory ***
[2025-10-13 07:26:58] total 407292
[2025-10-13 07:26:58] -rw-r--r-- 1 boincer umatlas    557409 Oct 13 05:31 pilot3.tar.gz
[2025-10-13 07:26:58] -rwx------ 1 boincer umatlas     36292 Oct 13 06:12 runpilot2-wrapper.sh
[2025-10-13 07:26:58] -rw-r--r-- 1 boincer umatlas      5112 Oct 13 06:12 queuedata.json
[2025-10-13 07:26:58] -rw-r--r-- 1 boincer umatlas       100 Oct 13 06:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 07:26:58] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 06:13 run_atlas
[2025-10-13 07:26:58] -rw-r--r-- 1 boincer umatlas       105 Oct 13 06:13 job.xml
[2025-10-13 07:26:58] -rw-r--r-- 2 boincer umatlas 221713204 Oct 13 06:13 EVNT.46676267._002539.pool.root.1
[2025-10-13 07:26:58] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 06:13 start_atlas.sh
[2025-10-13 07:26:58] drwxrwx--x 2 boincer umatlas      4096 Oct 13 06:13 shared
[2025-10-13 07:26:58] -rw-r--r-- 2 boincer umatlas    569684 Oct 13 06:13 input.tar.gz
[2025-10-13 07:26:58] -rw-r--r-- 1 boincer umatlas         0 Oct 13 06:13 boinc_lockfile
[2025-10-13 07:26:58] -rw-r--r-- 1 boincer umatlas      2549 Oct 13 06:13 pandaJob.out
[2025-10-13 07:26:58] -rw------- 1 boincer umatlas    972849 Oct 13 06:13 agis_schedconf.cvmfs.json
[2025-10-13 07:26:58] -rw------- 1 boincer umatlas   1560580 Oct 13 06:13 agis_ddmendpoints.agis.ALL.json
[2025-10-13 07:26:58] drwx------ 5 boincer umatlas      4096 Oct 13 06:13 pilot3
[2025-10-13 07:26:58] -rw-r--r-- 1 boincer umatlas      5953 Oct 13 07:21 init_data.xml
[2025-10-13 07:26:58] -rw------- 1 boincer umatlas 189430330 Oct 13 07:25 HITS.46676269._096644.pool.root.1
[2025-10-13 07:26:58] -rw------- 1 boincer umatlas        95 Oct 13 07:25 pilot_heartbeat.json
[2025-10-13 07:26:58] -rw-r--r-- 1 boincer umatlas       529 Oct 13 07:25 boinc_task_state.xml
[2025-10-13 07:26:58] -rw------- 1 boincer umatlas      1050 Oct 13 07:25 memory_monitor_summary.json
[2025-10-13 07:26:58] -rw------- 1 boincer umatlas    383708 Oct 13 07:25 log.46676269._096644.job.log.tgz.1
[2025-10-13 07:26:58] -rw------- 1 boincer umatlas      7852 Oct 13 07:26 heartbeat.json
[2025-10-13 07:26:58] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 07:26 boinc_mmap_file
[2025-10-13 07:26:58] -rw-r--r-- 1 boincer umatlas        27 Oct 13 07:26 wrapper_checkpoint.txt
[2025-10-13 07:26:58] -rw------- 1 boincer umatlas      4745 Oct 13 07:26 pilotlog.txt
[2025-10-13 07:26:58] -rw------- 1 boincer umatlas    630295 Oct 13 07:26 log.46676269._096644.job.log.1
[2025-10-13 07:26:58] -rw------- 1 boincer umatlas       357 Oct 13 07:26 output.list
[2025-10-13 07:26:58] -rw-r--r-- 1 boincer umatlas       620 Oct 13 07:26 runtime_log
[2025-10-13 07:26:58] -rw------- 1 boincer umatlas   1034240 Oct 13 07:26 result.tar.gz
[2025-10-13 07:26:58] -rw------- 1 boincer umatlas       659 Oct 13 07:26 xROODm6iUS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmdjVMDm9NYREo.diag
[2025-10-13 07:26:58] -rw-r--r-- 1 boincer umatlas      8705 Oct 13 07:26 runtime_log.err
[2025-10-13 07:26:58] -rw-r--r-- 1 boincer umatlas     22105 Oct 13 07:26 stderr.txt
[2025-10-13 07:26:58] HITS file was successfully produced:
[2025-10-13 07:26:58] -rw------- 1 boincer umatlas 189430330 Oct 13 07:25 shared/HITS.pool.root.1
[2025-10-13 07:26:58]  *** Contents of shared directory: ***
[2025-10-13 07:26:58] total 403100
[2025-10-13 07:26:58] -rw-r--r-- 2 boincer umatlas 221713204 Oct 13 06:13 ATLAS.root_0
[2025-10-13 07:26:58] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 06:13 start_atlas.sh
[2025-10-13 07:26:58] -rw-r--r-- 2 boincer umatlas    569684 Oct 13 06:13 input.tar.gz
[2025-10-13 07:26:58] -rw------- 1 boincer umatlas 189430330 Oct 13 07:25 HITS.pool.root.1
[2025-10-13 07:26:58] -rw------- 1 boincer umatlas   1034240 Oct 13 07:26 result.tar.gz
07:27:00 (3978): run_atlas exited; CPU time 47036.947570
07:27:00 (3978): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN