Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:07:08 (18222): wrapper (7.7.26015): starting
06:07:08 (18222): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 06:07:08] Arguments: --nthreads 8
[2025-10-13 06:07:08] Threads: 8
[2025-10-13 06:07:08] Checking for CVMFS
[2025-10-13 06:07:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 06:07:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 06:07:08] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 06:07:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 06:07:09] 2.11.2.0 2893 2213 68224 151657 3 1 15476546 20275200 1 130560 0 1539917 99.990 77137 34919 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 06:07:09] CVMFS is ok
[2025-10-13 06:07:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 06:07:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 06:07:09] Further information can be found at the LHC@home message board.
[2025-10-13 06:07:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 06:07:09] Checking for apptainer binary...
[2025-10-13 06:07:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 06:07:09] Running /usr/bin/apptainer --version
[2025-10-13 06:07:09] apptainer version 1.3.2-1.el7
[2025-10-13 06:07:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 06:07:10] c-204-22.aglt2.org
[2025-10-13 06:07:10] apptainer works
[2025-10-13 06:07:10] Set ATHENA_PROC_NUMBER=8
[2025-10-13 06:07:10] Set ATHENA_CORE_NUMBER=8
[2025-10-13 06:07:10] Starting ATLAS job with PandaID=6842756990
[2025-10-13 06:07:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 08:05:46]  *** The last 200 lines of the pilot log: ***
[2025-10-13 08:05:46] 2025-10-13 12:04:52,750 | INFO     | intersect: -63733498819.05568
[2025-10-13 08:05:46] 2025-10-13 12:04:52,750 | INFO     | chi2: 1.373977292999345
[2025-10-13 08:05:46] 2025-10-13 12:04:52,750 | INFO     | current chi2=1.373977292999345 (change=-0.16611663202909246 %)
[2025-10-13 08:05:46] 2025-10-13 12:04:52,750 | INFO     | right removable region: 109
[2025-10-13 08:05:46] 2025-10-13 12:04:52,750 | INFO     | sum of square deviations: 412686807.5
[2025-10-13 08:05:46] 2025-10-13 12:04:52,751 | INFO     | sum of deviations: -147759811.99999946
[2025-10-13 08:05:46] 2025-10-13 12:04:52,751 | INFO     | mean x: 1760353708.5
[2025-10-13 08:05:46] 2025-10-13 12:04:52,751 | INFO     | mean y: 2519272.9272727272
[2025-10-13 08:05:46] 2025-10-13 12:04:52,751 | INFO     | -- intersect: 632802403.6073389
[2025-10-13 08:05:46] 2025-10-13 12:04:52,751 | INFO     | intersect: 632802403.6073389
[2025-10-13 08:05:46] 2025-10-13 12:04:52,752 | INFO     | chi2: 0.022382182877975894
[2025-10-13 08:05:46] 2025-10-13 12:04:52,752 | INFO     | current chi2=0.022382182877975894 (change=98.36828719655135 %)
[2025-10-13 08:05:46] 2025-10-13 12:04:52,752 | INFO     | sum of square deviations: 358927660.0
[2025-10-13 08:05:46] 2025-10-13 12:04:52,753 | INFO     | sum of deviations: 1537098191.0
[2025-10-13 08:05:46] 2025-10-13 12:04:52,753 | INFO     | mean x: 1760353861.0
[2025-10-13 08:05:46] 2025-10-13 12:04:52,753 | INFO     | mean y: 2514612.9523809524
[2025-10-13 08:05:46] 2025-10-13 12:04:52,753 | INFO     | -- intersect: -7536154140.698327
[2025-10-13 08:05:46] 2025-10-13 12:04:52,753 | INFO     | intersect: -7536154140.698327
[2025-10-13 08:05:46] 2025-10-13 12:04:52,753 | INFO     | chi2: 0.0007242686920384487
[2025-10-13 08:05:46] 2025-10-13 12:04:52,754 | INFO     | current chi2=0.0007242686920384487 (change=96.76408375363992 %)
[2025-10-13 08:05:46] 2025-10-13 12:04:52,754 | INFO     | sum of square deviations: 310052325.0
[2025-10-13 08:05:46] 2025-10-13 12:04:52,754 | INFO     | sum of deviations: 989959727.9999998
[2025-10-13 08:05:46] 2025-10-13 12:04:52,754 | INFO     | mean x: 1760354013.5
[2025-10-13 08:05:46] 2025-10-13 12:04:52,754 | INFO     | mean y: 2516312.62
[2025-10-13 08:05:46] 2025-10-13 12:04:52,755 | INFO     | -- intersect: -5618082018.28485
[2025-10-13 08:05:46] 2025-10-13 12:04:52,755 | INFO     | intersect: -5618082018.28485
[2025-10-13 08:05:46] 2025-10-13 12:04:52,755 | INFO     | chi2: 0.0002673216346712022
[2025-10-13 08:05:46] 2025-10-13 12:04:52,755 | INFO     | current chi2=0.0002673216346712022 (change=63.09082007689335 %)
[2025-10-13 08:05:46] 2025-10-13 12:04:52,755 | INFO     | sum of square deviations: 265828240.0
[2025-10-13 08:05:46] 2025-10-13 12:04:52,756 | INFO     | sum of deviations: 720959549.0
[2025-10-13 08:05:46] 2025-10-13 12:04:52,756 | INFO     | mean x: 1760354166.0
[2025-10-13 08:05:46] 2025-10-13 12:04:52,756 | INFO     | mean y: 2517236.5894736843
[2025-10-13 08:05:46] 2025-10-13 12:04:52,756 | INFO     | -- intersect: -4771784190.526137
[2025-10-13 08:05:46] 2025-10-13 12:04:52,756 | INFO     | intersect: -4771784190.526137
[2025-10-13 08:05:46] 2025-10-13 12:04:52,756 | INFO     | chi2: 0.0001934249914332843
[2025-10-13 08:05:46] 2025-10-13 12:04:52,757 | INFO     | current chi2=0.0001934249914332843 (change=27.64334556341039 %)
[2025-10-13 08:05:46] 2025-10-13 12:04:52,757 | INFO     | sum of square deviations: 226022842.5
[2025-10-13 08:05:46] 2025-10-13 12:04:52,757 | INFO     | sum of deviations: 522790252.0
[2025-10-13 08:05:46] 2025-10-13 12:04:52,757 | INFO     | mean x: 1760354318.5
[2025-10-13 08:05:46] 2025-10-13 12:04:52,758 | INFO     | mean y: 2517994.9111111113
[2025-10-13 08:05:46] 2025-10-13 12:04:52,758 | INFO     | -- intersect: -4069177005.4643636
[2025-10-13 08:05:46] 2025-10-13 12:04:52,758 | INFO     | intersect: -4069177005.4643636
[2025-10-13 08:05:46] 2025-10-13 12:04:52,758 | INFO     | chi2: 0.00015495120719074675
[2025-10-13 08:05:46] 2025-10-13 12:04:52,758 | INFO     | current chi2=0.00015495120719074675 (change=19.89080312603133 %)
[2025-10-13 08:05:46] 2025-10-13 12:04:52,758 | INFO     | left removable region: 50
[2025-10-13 08:05:46] 2025-10-13 12:04:52,758 | INFO     | sum of square deviations: 63666310.0
[2025-10-13 08:05:46] 2025-10-13 12:04:52,759 | INFO     | sum of deviations: 54784466.00000001
[2025-10-13 08:05:46] 2025-10-13 12:04:52,759 | INFO     | mean x: 1760354898.0
[2025-10-13 08:05:46] 2025-10-13 12:04:52,759 | INFO     | mean y: 2518948.9830508474
[2025-10-13 08:05:46] 2025-10-13 12:04:52,759 | INFO     | -- intersect: -1512255553.5350704
[2025-10-13 08:05:46] 2025-10-13 12:04:52,759 | INFO     | intersect: -1512255553.5350704
[2025-10-13 08:05:46] 2025-10-13 12:04:52,759 | INFO     | chi2: 2.7824312799908283e-05
[2025-10-13 08:05:46] 2025-10-13 12:04:52,760 | INFO     | -- intersect: -1512255553.5350704
[2025-10-13 08:05:46] 2025-10-13 12:04:52,760 | INFO     | current memory leak: 0.86 B/s (using 59 data points, chi2=0.00)
[2025-10-13 08:05:46] 2025-10-13 12:04:52,760 | INFO     | could have reported an average CPU frequency of 1955 MHz (7 samples)
[2025-10-13 08:05:46] 2025-10-13 12:04:52,760 | INFO     | ..............................
[2025-10-13 08:05:46] 2025-10-13 12:04:52,760 | INFO     | . Timing measurements:
[2025-10-13 08:05:46] 2025-10-13 12:04:52,760 | INFO     | . get job = 0 s
[2025-10-13 08:05:46] 2025-10-13 12:04:52,761 | INFO     | . initial setup = 2 s
[2025-10-13 08:05:46] 2025-10-13 12:04:52,761 | INFO     | . payload setup = 8 s
[2025-10-13 08:05:46] 2025-10-13 12:04:52,761 | INFO     | . stage-in = 0 s
[2025-10-13 08:05:46] 2025-10-13 12:04:52,761 | INFO     | . payload execution = 7008 s
[2025-10-13 08:05:46] 2025-10-13 12:04:52,761 | INFO     | . stage-out = 0 s
[2025-10-13 08:05:46] 2025-10-13 12:04:52,761 | INFO     | . log creation = 0 s
[2025-10-13 08:05:46] 2025-10-13 12:04:52,761 | INFO     | ..............................
[2025-10-13 08:05:46] 2025-10-13 12:04:53,156 | INFO     | 
[2025-10-13 08:05:46] 2025-10-13 12:04:53,156 | INFO     | job summary report
[2025-10-13 08:05:46] 2025-10-13 12:04:53,156 | INFO     | --------------------------------------------------
[2025-10-13 08:05:46] 2025-10-13 12:04:53,156 | INFO     | PanDA job id: 6842756990
[2025-10-13 08:05:46] 2025-10-13 12:04:53,156 | INFO     | task id: 46676269
[2025-10-13 08:05:46] 2025-10-13 12:04:53,157 | INFO     | errors: (none)
[2025-10-13 08:05:46] 2025-10-13 12:04:53,157 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 08:05:46] 2025-10-13 12:04:53,157 | INFO     | pilot state: finished 
[2025-10-13 08:05:46] 2025-10-13 12:04:53,157 | INFO     | transexitcode: 0
[2025-10-13 08:05:46] 2025-10-13 12:04:53,157 | INFO     | exeerrorcode: 0
[2025-10-13 08:05:46] 2025-10-13 12:04:53,158 | INFO     | exeerrordiag: 
[2025-10-13 08:05:46] 2025-10-13 12:04:53,158 | INFO     | exitcode: 0
[2025-10-13 08:05:46] 2025-10-13 12:04:53,158 | INFO     | exitmsg: OK
[2025-10-13 08:05:46] 2025-10-13 12:04:53,158 | INFO     | cpuconsumptiontime: 51405 s
[2025-10-13 08:05:46] 2025-10-13 12:04:53,158 | INFO     | nevents: 400
[2025-10-13 08:05:46] 2025-10-13 12:04:53,158 | INFO     | neventsw: 0
[2025-10-13 08:05:46] 2025-10-13 12:04:53,159 | INFO     | pid: 29277
[2025-10-13 08:05:46] 2025-10-13 12:04:53,159 | INFO     | pgrp: 29277
[2025-10-13 08:05:46] 2025-10-13 12:04:53,159 | INFO     | corecount: 8
[2025-10-13 08:05:46] 2025-10-13 12:04:53,159 | INFO     | event service: False
[2025-10-13 08:05:46] 2025-10-13 12:04:53,159 | INFO     | sizes: {0: 2348756, 6: 2349018, 11: 2349046, 7020: 2376272, 7021: 2385326, 7027: 2385464}
[2025-10-13 08:05:46] 2025-10-13 12:04:53,159 | INFO     | --------------------------------------------------
[2025-10-13 08:05:46] 2025-10-13 12:04:53,160 | INFO     | 
[2025-10-13 08:05:46] 2025-10-13 12:04:53,160 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 08:05:46] 2025-10-13 12:04:53,187 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 08:05:46] 2025-10-13 12:04:53,188 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 08:05:46] 2025-10-13 12:04:53,188 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 08:05:46] 2025-10-13 12:04:53,188 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 08:05:46] 2025-10-13 12:04:53,188 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 08:05:46] 2025-10-13 12:04:53,188 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 08:05:46] 2025-10-13 12:04:53,188 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 08:05:46] 2025-10-13 12:04:53,189 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 08:05:46] 2025-10-13 12:04:53,189 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 08:05:46] 2025-10-13 12:04:53,189 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 08:05:46] 2025-10-13 12:04:53,189 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 08:05:46] 2025-10-13 12:04:53,189 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 08:05:46] 2025-10-13 12:04:53,190 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 08:05:46] 2025-10-13 12:04:53,190 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 08:05:46] 2025-10-13 12:04:53,190 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 08:05:46] 2025-10-13 12:04:53,190 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 08:05:46] 2025-10-13 12:04:53,190 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 08:05:46] 2025-10-13 12:04:53,191 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 08:05:46] 2025-10-13 12:04:53,191 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 08:05:46] 2025-10-13 12:04:53,191 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 08:05:46] 2025-10-13 12:04:53,191 | INFO     | job 6842756990 has completed (purged errors)
[2025-10-13 08:05:46] 2025-10-13 12:04:53,191 | INFO     | overall cleanup function is called
[2025-10-13 08:05:46] 2025-10-13 12:04:54,200 | INFO     | --- collectZombieJob: --- 10, [29277]
[2025-10-13 08:05:46] 2025-10-13 12:04:54,200 | INFO     | zombie collector waiting for pid 29277
[2025-10-13 08:05:46] 2025-10-13 12:04:54,200 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 08:05:46] 2025-10-13 12:04:54,200 | INFO     | collected zombie processes
[2025-10-13 08:05:46] 2025-10-13 12:04:54,200 | INFO     | will attempt to kill all subprocesses of pid=29277
[2025-10-13 08:05:46] 2025-10-13 12:04:54,289 | INFO     | process IDs to be killed: [29277] (in reverse order)
[2025-10-13 08:05:46] 2025-10-13 12:04:54,347 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 08:05:46] 2025-10-13 12:04:54,348 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 08:05:46] 2025-10-13 12:04:54,352 | INFO     | did not find any defunct processes belonging to 29277
[2025-10-13 08:05:46] 2025-10-13 12:04:54,355 | INFO     | did not find any defunct processes belonging to 29277
[2025-10-13 08:05:46] 2025-10-13 12:04:54,356 | INFO     | ready for new job
[2025-10-13 08:05:46] 2025-10-13 12:04:54,356 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 08:05:46] 2025-10-13 12:04:54,378 | INFO     | ***************************************
[2025-10-13 08:05:46] 2025-10-13 12:04:54,378 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 08:05:46] 2025-10-13 12:04:54,378 | INFO     | ***************************************
[2025-10-13 08:05:46] 2025-10-13 12:04:54,378 | INFO     | 
[2025-10-13 08:05:46] 2025-10-13 12:04:54,379 | INFO     | architecture information:
[2025-10-13 08:05:46] 2025-10-13 12:04:54,379 | INFO     | executing command: cat /etc/os-release
[2025-10-13 08:05:46] 2025-10-13 12:04:54,398 | INFO     | cat /etc/os-release:
[2025-10-13 08:05:46] NAME="CentOS Linux"
[2025-10-13 08:05:46] VERSION="7 (Core)"
[2025-10-13 08:05:46] ID="centos"
[2025-10-13 08:05:46] ID_LIKE="rhel fedora"
[2025-10-13 08:05:46] VERSION_ID="7"
[2025-10-13 08:05:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 08:05:46] ANSI_COLOR="0;31"
[2025-10-13 08:05:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 08:05:46] HOME_URL="https://www.centos.org/"
[2025-10-13 08:05:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 08:05:46] 
[2025-10-13 08:05:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 08:05:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 08:05:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 08:05:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 08:05:46] 
[2025-10-13 08:05:46] 2025-10-13 12:04:54,399 | INFO     | ***************************************
[2025-10-13 08:05:46] 2025-10-13 12:04:54,902 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 08:05:46] 2025-10-13 12:04:54,921 | INFO     | sufficient remaining disk space (18561892352 B)
[2025-10-13 08:05:46] 2025-10-13 12:04:54,921 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 08:05:46] 2025-10-13 12:04:54,922 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 08:05:46] 2025-10-13 12:04:54,922 | INFO     | update_server=False
[2025-10-13 08:05:46] 2025-10-13 12:04:54,922 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 08:05:46] 2025-10-13 12:04:54,923 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 08:05:46] 2025-10-13 12:04:54,923 | INFO     | aborting loop
[2025-10-13 08:05:46] 2025-10-13 12:04:54,986 | INFO     | all payload control threads have been joined
[2025-10-13 08:05:46] 2025-10-13 12:04:55,172 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 08:05:46] 2025-10-13 12:04:55,220 | INFO     | all job control threads have been joined
[2025-10-13 08:05:46] 2025-10-13 12:04:55,895 | INFO     | all data control threads have been joined
[2025-10-13 08:05:46] 2025-10-13 12:04:55,924 | INFO     | [job] retrieve thread has finished
[2025-10-13 08:05:46] 2025-10-13 12:04:55,927 | INFO     | [job] job monitor thread has finished
[2025-10-13 08:05:46] 2025-10-13 12:04:55,991 | INFO     | [payload] control thread has finished
[2025-10-13 08:05:46] 2025-10-13 12:04:56,226 | INFO     | [job] control thread has finished
[2025-10-13 08:05:46] 2025-10-13 12:04:56,477 | INFO     | [payload] validate_post thread has finished
[2025-10-13 08:05:46] 2025-10-13 12:04:56,900 | INFO     | [data] control thread has finished
[2025-10-13 08:05:46] 2025-10-13 12:04:56,972 | INFO     | [payload] failed_post thread has finished
[2025-10-13 08:05:46] 2025-10-13 12:04:57,094 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 08:05:46] 2025-10-13 12:04:57,131 | INFO     | [job] validate thread has finished
[2025-10-13 08:05:46] 2025-10-13 12:04:57,177 | INFO     | [data] copytool_out thread has finished
[2025-10-13 08:05:46] 2025-10-13 12:04:57,221 | INFO     | [data] copytool_in thread has finished
[2025-10-13 08:05:46] 2025-10-13 12:04:57,289 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 08:05:46] 2025-10-13 12:04:57,323 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 08:05:46] 2025-10-13 12:04:57,758 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 08:05:46] 2025-10-13 12:04:57,862 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 08:05:46] 2025-10-13 12:04:58,867 | INFO     | [job] queue monitor thread has finished
[2025-10-13 08:05:46] 2025-10-13 12:05:01,764 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 08:05:46] 2025-10-13 12:05:05,301 | INFO     | job.realtimelogging is not enabled
[2025-10-13 08:05:46] 2025-10-13 12:05:06,307 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 08:05:46] 2025-10-13 12:05:25,774 | INFO     | PID=22412 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 08:05:46] 2025-10-13 12:05:25,775 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 08:05:46] 2025-10-13 12:05:25,775 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 08:05:46] 2025-10-13 12:05:25,775 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 08:05:46] 2025-10-13 12:05:39,042 | INFO     | [monitor] cgroup control has ended
[2025-10-13 08:05:46] 2025-10-13 12:05:41,058 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140588837459776)>', '<ExcThread(monitor, started 140588036912896)>']
[2025-10-13 08:05:46] 2025-10-13 12:05:41,856 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 08:05:46] 2025-10-13 12:05:41,856 | INFO     | [monitor] control thread has ended
[2025-10-13 08:05:46] 2025-10-13 12:05:46,083 | INFO     | all workflow threads have been joined
[2025-10-13 08:05:46] 2025-10-13 12:05:46,083 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 08:05:46] 2025-10-13 12:05:46,084 | INFO     | traces error code: 0
[2025-10-13 08:05:46] 2025-10-13 12:05:46,084 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 08:05:46] 2025-10-13 12:05:46,194 [wrapper] ==== pilot stdout END ====
[2025-10-13 08:05:46] 2025-10-13 12:05:46,199 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 08:05:46] 2025-10-13 12:05:46,204 [wrapper] pilotpid: 22412
[2025-10-13 08:05:46] 2025-10-13 12:05:46,208 [wrapper] Pilot exit status: 0
[2025-10-13 08:05:46] 2025-10-13 12:05:46,229 [wrapper] pandaids: 6842756990
[2025-10-13 08:05:46] 2025-10-13 12:05:46,281 [wrapper] cleanup supervisor_pilot 13218 22413
[2025-10-13 08:05:46] 2025-10-13 12:05:46,287 [wrapper] Test setup, not cleaning
[2025-10-13 08:05:46] 2025-10-13 12:05:46,292 [wrapper] apfmon messages muted
[2025-10-13 08:05:46] 2025-10-13 12:05:46,297 [wrapper] ==== wrapper stdout END ====
[2025-10-13 08:05:46] 2025-10-13 12:05:46,302 [wrapper] ==== wrapper stderr END ====
[2025-10-13 08:05:46]  *** Error codes and diagnostics ***
[2025-10-13 08:05:46]     "exeErrorCode": 0,
[2025-10-13 08:05:46]     "exeErrorDiag": "",
[2025-10-13 08:05:46]     "pilotErrorCode": 0,
[2025-10-13 08:05:46]     "pilotErrorDiag": "",
[2025-10-13 08:05:46]  *** Listing of results directory ***
[2025-10-13 08:05:46] total 403948
[2025-10-13 08:05:46] -rw-r--r-- 1 boincer umatlas    557409 Oct 13 05:05 pilot3.tar.gz
[2025-10-13 08:05:46] -rw-r--r-- 1 boincer umatlas      5112 Oct 13 05:10 queuedata.json
[2025-10-13 08:05:46] -rwx------ 1 boincer umatlas     36292 Oct 13 05:11 runpilot2-wrapper.sh
[2025-10-13 08:05:46] -rw-r--r-- 1 boincer umatlas       100 Oct 13 06:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 08:05:46] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 06:07 run_atlas
[2025-10-13 08:05:46] -rw-r--r-- 1 boincer umatlas       105 Oct 13 06:07 job.xml
[2025-10-13 08:05:46] -rw-r--r-- 2 boincer umatlas 221678238 Oct 13 06:07 EVNT.46676267._004670.pool.root.1
[2025-10-13 08:05:46] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 06:07 start_atlas.sh
[2025-10-13 08:05:46] drwxrwx--x 2 boincer umatlas      4096 Oct 13 06:07 shared
[2025-10-13 08:05:46] -rw-r--r-- 2 boincer umatlas    569686 Oct 13 06:07 input.tar.gz
[2025-10-13 08:05:46] -rw-r--r-- 1 boincer umatlas         0 Oct 13 06:07 boinc_lockfile
[2025-10-13 08:05:46] -rw-r--r-- 1 boincer umatlas      2549 Oct 13 06:07 pandaJob.out
[2025-10-13 08:05:46] -rw------- 1 boincer umatlas    972849 Oct 13 06:07 agis_schedconf.cvmfs.json
[2025-10-13 08:05:46] -rw------- 1 boincer umatlas   1560580 Oct 13 06:07 agis_ddmendpoints.agis.ALL.json
[2025-10-13 08:05:46] drwx------ 5 boincer umatlas      4096 Oct 13 06:07 pilot3
[2025-10-13 08:05:46] -rw-r--r-- 1 boincer umatlas      5909 Oct 13 08:03 init_data.xml
[2025-10-13 08:05:46] -rw------- 1 boincer umatlas 185377346 Oct 13 08:04 HITS.46676269._096545.pool.root.1
[2025-10-13 08:05:46] -rw-r--r-- 1 boincer umatlas       529 Oct 13 08:04 boinc_task_state.xml
[2025-10-13 08:05:46] -rw------- 1 boincer umatlas      1050 Oct 13 08:04 memory_monitor_summary.json
[2025-10-13 08:05:46] -rw------- 1 boincer umatlas    351851 Oct 13 08:04 log.46676269._096545.job.log.tgz.1
[2025-10-13 08:05:46] -rw------- 1 boincer umatlas      7842 Oct 13 08:04 heartbeat.json
[2025-10-13 08:05:46] -rw------- 1 boincer umatlas        95 Oct 13 08:05 pilot_heartbeat.json
[2025-10-13 08:05:46] -rw-r--r-- 1 boincer umatlas        27 Oct 13 08:05 wrapper_checkpoint.txt
[2025-10-13 08:05:46] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 08:05 boinc_mmap_file
[2025-10-13 08:05:46] -rw------- 1 boincer umatlas      4818 Oct 13 08:05 pilotlog.txt
[2025-10-13 08:05:46] -rw------- 1 boincer umatlas    995459 Oct 13 08:05 log.46676269._096545.job.log.1
[2025-10-13 08:05:46] -rw------- 1 boincer umatlas       357 Oct 13 08:05 output.list
[2025-10-13 08:05:46] -rw-r--r-- 1 boincer umatlas       620 Oct 13 08:05 runtime_log
[2025-10-13 08:05:46] -rw------- 1 boincer umatlas   1361920 Oct 13 08:05 result.tar.gz
[2025-10-13 08:05:46] -rw-r--r-- 1 boincer umatlas      8703 Oct 13 08:05 runtime_log.err
[2025-10-13 08:05:46] -rw------- 1 boincer umatlas       660 Oct 13 08:05 LoPKDmclTS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6jmNDmjlQ7zm.diag
[2025-10-13 08:05:46] -rw-r--r-- 1 boincer umatlas     20869 Oct 13 08:05 stderr.txt
[2025-10-13 08:05:46] HITS file was successfully produced:
[2025-10-13 08:05:46] -rw------- 1 boincer umatlas 185377346 Oct 13 08:04 shared/HITS.pool.root.1
[2025-10-13 08:05:46]  *** Contents of shared directory: ***
[2025-10-13 08:05:46] total 399428
[2025-10-13 08:05:46] -rw-r--r-- 2 boincer umatlas 221678238 Oct 13 06:07 ATLAS.root_0
[2025-10-13 08:05:46] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 06:07 start_atlas.sh
[2025-10-13 08:05:46] -rw-r--r-- 2 boincer umatlas    569686 Oct 13 06:07 input.tar.gz
[2025-10-13 08:05:46] -rw------- 1 boincer umatlas 185377346 Oct 13 08:04 HITS.pool.root.1
[2025-10-13 08:05:46] -rw------- 1 boincer umatlas   1361920 Oct 13 08:05 result.tar.gz
08:05:47 (18222): run_atlas exited; CPU time 51420.097969
08:05:47 (18222): called boinc_finish(0)

</stderr_txt>
]]>

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