Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
12:04:05 (706469): wrapper (7.7.26015): starting
12:04:05 (706469): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 12:04:05] Arguments: --nthreads 3
[2025-10-13 12:04:05] Threads: 3
[2025-10-13 12:04:05] Checking for CVMFS
[2025-10-13 12:04:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 12:04:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 12:04:05] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 12:04:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 12:04:05] 2.9.2.0 2543460 5617 84968 151656 2 57 4294229 36864001 0 130560 0 4335138 99.991 192040 905 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 12:04:05] CVMFS is ok
[2025-10-13 12:04:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 12:04:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 12:04:05] Further information can be found at the LHC@home message board.
[2025-10-13 12:04:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 12:04:05] Checking for apptainer binary...
[2025-10-13 12:04:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 12:04:05] Running /usr/bin/apptainer --version
[2025-10-13 12:04:05] apptainer version 1.4.1-1.1
[2025-10-13 12:04:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 12:04:05] cosA125b
[2025-10-13 12:04:05] apptainer works
[2025-10-13 12:04:05] Set ATHENA_PROC_NUMBER=3
[2025-10-13 12:04:05] Set ATHENA_CORE_NUMBER=3
[2025-10-13 12:04:05] Starting ATLAS job with PandaID=6840851845
[2025-10-13 12:04:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 13:29:25]  *** The last 200 lines of the pilot log: ***
[2025-10-13 13:29:25]  storage_token=
[2025-10-13 13:29:25]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6840851845/log.46676269._091024.job.log.tgz.1
[2025-10-13 13:29:25]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f5/18/log.46676269._091024.job.log.tgz.1
[2025-10-13 13:29:25]  workdir=None
[2025-10-13 13:29:25] ]
[2025-10-13 13:29:25] 2025-10-13 11:28:45,610 | INFO     | transferring file log.46676269._091024.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6840851845/log.46676269._091024.job.log.tgz.1 to /local/data/boinc/
[2025-10-13 13:29:25] 2025-10-13 11:28:45,611 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6840851845/log.46676269._091024.job.log.tgz.1 /local/data/boinc/slots/0/log.46676269._0910
[2025-10-13 13:29:25] 2025-10-13 11:28:45,622 | INFO     | adding to output.list: log.46676269._091024.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f5/18/log.46676269._091024.job.log.tg
[2025-10-13 13:29:25] 2025-10-13 11:28:45,623 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 13:29:25] 2025-10-13 11:28:45,623 | INFO     | summary of transferred files:
[2025-10-13 13:29:25] 2025-10-13 11:28:45,623 | INFO     |  -- lfn=log.46676269._091024.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 13:29:25] 2025-10-13 11:28:45,623 | INFO     | stage-out finished correctly
[2025-10-13 13:29:25] 2025-10-13 11:28:46,684 | INFO     | time since job start (5075s) is within the limit (172800.0s)
[2025-10-13 13:29:25] 2025-10-13 11:28:47,726 | WARNING  | process 716661 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 13:29:25] 2025-10-13 11:28:47,727 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6840851845/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 13:29:25] 2025-10-13 11:28:47,773 | INFO     | number of running child processes to parent process 716661: 1
[2025-10-13 13:29:25] 2025-10-13 11:28:47,773 | INFO     | maximum number of monitored processes: 6
[2025-10-13 13:29:25] 2025-10-13 11:28:47,778 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 13:29:25] 2025-10-13 11:28:47,807 | INFO     | job 6840851845 has state=finished
[2025-10-13 13:29:25] 2025-10-13 11:28:47,808 | INFO     | preparing for final server update for job 6840851845 in state='finished'
[2025-10-13 13:29:25] 2025-10-13 11:28:47,808 | INFO     | this job has now completed (state=finished)
[2025-10-13 13:29:25] 2025-10-13 11:28:47,808 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 13:29:25] 2025-10-13 11:28:47,808 | INFO     | log transfer has been attempted: DONE
[2025-10-13 13:29:25] 2025-10-13 11:28:47,808 | INFO     | job 6840851845 has finished - writing final server update
[2025-10-13 13:29:25] 2025-10-13 11:28:47,808 | INFO     | total number of processed events: 400 (read)
[2025-10-13 13:29:25] 2025-10-13 11:28:47,808 | INFO     | executing command: lscpu
[2025-10-13 13:29:25] 2025-10-13 11:28:47,822 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 13:29:25] 2025-10-13 11:28:48,690 | INFO     | time since job start (5077s) is within the limit (172800.0s)
[2025-10-13 13:29:25] 2025-10-13 11:28:50,276 | INFO     | monitor loop #390: job 0:6840851845 is in state 'finished'
[2025-10-13 13:29:25] 2025-10-13 11:28:50,276 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 13:29:25] 2025-10-13 11:28:50,695 | INFO     | time since job start (5079s) is within the limit (172800.0s)
[2025-10-13 13:29:25] 2025-10-13 11:28:52,701 | INFO     | time since job start (5081s) is within the limit (172800.0s)
[2025-10-13 13:29:25] 2025-10-13 11:28:52,779 | INFO     | monitor loop #391: job 0:6840851845 is in state 'finished'
[2025-10-13 13:29:25] 2025-10-13 11:28:52,779 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 13:29:25] 2025-10-13 11:28:53,349 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 13:29:25] 2025-10-13 11:28:53,351 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3804.699916666667
[2025-10-13 13:29:25] 2025-10-13 11:28:53,352 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6840851845/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 13:29:25] 2025-10-13 11:28:53,352 | INFO     | extracted standard info from prmon json
[2025-10-13 13:29:25] 2025-10-13 11:28:53,353 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 13:29:25] 2025-10-13 11:28:53,353 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 13:29:25] 2025-10-13 11:28:53,353 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 13:29:25] 2025-10-13 11:28:53,353 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 13:29:25] 2025-10-13 11:28:53,353 | INFO     | fitting pss+swap vs Time
[2025-10-13 13:29:25] 2025-10-13 11:28:53,354 | INFO     | sum of square deviations: 136095575.0
[2025-10-13 13:29:25] 2025-10-13 11:28:53,354 | INFO     | sum of deviations: -364267630.5000002
[2025-10-13 13:29:25] 2025-10-13 11:28:53,354 | INFO     | mean x: 1760352462.5
[2025-10-13 13:29:25] 2025-10-13 11:28:53,354 | INFO     | mean y: 2358690.197368421
[2025-10-13 13:29:25] 2025-10-13 11:28:53,354 | INFO     | -- intersect: 4714043257.162278
[2025-10-13 13:29:25] 2025-10-13 11:28:53,354 | INFO     | intersect: 4714043257.162278
[2025-10-13 13:29:25] 2025-10-13 11:28:53,354 | INFO     | chi2: 0.012166246277277758
[2025-10-13 13:29:25] 2025-10-13 11:28:53,354 | INFO     | -- intersect: 4714043257.162278
[2025-10-13 13:29:25] 2025-10-13 11:28:53,354 | INFO     | current memory leak: -2.68 B/s (using 76 data points, chi2=0.01)
[2025-10-13 13:29:25] 2025-10-13 11:28:53,354 | INFO     | could have reported an average CPU frequency of 3912 MHz (6 samples)
[2025-10-13 13:29:25] 2025-10-13 11:28:53,354 | INFO     | ..............................
[2025-10-13 13:29:25] 2025-10-13 11:28:53,354 | INFO     | . Timing measurements:
[2025-10-13 13:29:25] 2025-10-13 11:28:53,354 | INFO     | . get job = 0 s
[2025-10-13 13:29:25] 2025-10-13 11:28:53,354 | INFO     | . initial setup = 1 s
[2025-10-13 13:29:25] 2025-10-13 11:28:53,354 | INFO     | . payload setup = 2 s
[2025-10-13 13:29:25] 2025-10-13 11:28:53,354 | INFO     | . stage-in = 0 s
[2025-10-13 13:29:25] 2025-10-13 11:28:53,354 | INFO     | . payload execution = 5055 s
[2025-10-13 13:29:25] 2025-10-13 11:28:53,354 | INFO     | . stage-out = 0 s
[2025-10-13 13:29:25] 2025-10-13 11:28:53,354 | INFO     | . log creation = 0 s
[2025-10-13 13:29:25] 2025-10-13 11:28:53,354 | INFO     | ..............................
[2025-10-13 13:29:25] 2025-10-13 11:28:53,385 | INFO     | 
[2025-10-13 13:29:25] 2025-10-13 11:28:53,386 | INFO     | job summary report
[2025-10-13 13:29:25] 2025-10-13 11:28:53,386 | INFO     | --------------------------------------------------
[2025-10-13 13:29:25] 2025-10-13 11:28:53,386 | INFO     | PanDA job id: 6840851845
[2025-10-13 13:29:25] 2025-10-13 11:28:53,386 | INFO     | task id: 46676269
[2025-10-13 13:29:25] 2025-10-13 11:28:53,386 | INFO     | errors: (none)
[2025-10-13 13:29:25] 2025-10-13 11:28:53,386 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 13:29:25] 2025-10-13 11:28:53,386 | INFO     | pilot state: finished 
[2025-10-13 13:29:25] 2025-10-13 11:28:53,386 | INFO     | transexitcode: 0
[2025-10-13 13:29:25] 2025-10-13 11:28:53,386 | INFO     | exeerrorcode: 0
[2025-10-13 13:29:25] 2025-10-13 11:28:53,386 | INFO     | exeerrordiag: 
[2025-10-13 13:29:25] 2025-10-13 11:28:53,386 | INFO     | exitcode: 0
[2025-10-13 13:29:25] 2025-10-13 11:28:53,386 | INFO     | exitmsg: OK
[2025-10-13 13:29:25] 2025-10-13 11:28:53,386 | INFO     | cpuconsumptiontime: 14521 s
[2025-10-13 13:29:25] 2025-10-13 11:28:53,386 | INFO     | nevents: 400
[2025-10-13 13:29:25] 2025-10-13 11:28:53,386 | INFO     | neventsw: 0
[2025-10-13 13:29:25] 2025-10-13 11:28:53,386 | INFO     | pid: 716661
[2025-10-13 13:29:25] 2025-10-13 11:28:53,386 | INFO     | pgrp: 716661
[2025-10-13 13:29:25] 2025-10-13 11:28:53,386 | INFO     | corecount: 3
[2025-10-13 13:29:25] 2025-10-13 11:28:53,386 | INFO     | event service: False
[2025-10-13 13:29:25] 2025-10-13 11:28:53,386 | INFO     | sizes: {0: 2348860, 3: 2349122, 11: 2349150, 5061: 2375647, 5062: 2384651, 5064: 2384707, 5069: 2385029}
[2025-10-13 13:29:25] 2025-10-13 11:28:53,386 | INFO     | --------------------------------------------------
[2025-10-13 13:29:25] 2025-10-13 11:28:53,386 | INFO     | 
[2025-10-13 13:29:25] 2025-10-13 11:28:53,386 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-13 13:29:25] 2025-10-13 11:28:53,398 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 13:29:25] 2025-10-13 11:28:53,399 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 13:29:25] 2025-10-13 11:28:53,399 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 13:29:25] 2025-10-13 11:28:53,399 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 13:29:25] 2025-10-13 11:28:53,399 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 13:29:25] 2025-10-13 11:28:53,399 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 13:29:25] 2025-10-13 11:28:53,399 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 13:29:25] 2025-10-13 11:28:53,399 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 13:29:25] 2025-10-13 11:28:53,399 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 13:29:25] 2025-10-13 11:28:53,399 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 13:29:25] 2025-10-13 11:28:53,399 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 13:29:25] 2025-10-13 11:28:53,399 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 13:29:25] 2025-10-13 11:28:53,399 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 13:29:25] 2025-10-13 11:28:53,399 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 13:29:25] 2025-10-13 11:28:53,399 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 13:29:25] 2025-10-13 11:28:53,399 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 13:29:25] 2025-10-13 11:28:53,399 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 13:29:25] 2025-10-13 11:28:53,399 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 13:29:25] 2025-10-13 11:28:53,399 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 13:29:25] 2025-10-13 11:28:53,399 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 13:29:25] 2025-10-13 11:28:53,399 | INFO     | job 6840851845 has completed (purged errors)
[2025-10-13 13:29:25] 2025-10-13 11:28:53,399 | INFO     | overall cleanup function is called
[2025-10-13 13:29:25] 2025-10-13 11:28:54,405 | INFO     | --- collectZombieJob: --- 10, [716661]
[2025-10-13 13:29:25] 2025-10-13 11:28:54,405 | INFO     | zombie collector waiting for pid 716661
[2025-10-13 13:29:25] 2025-10-13 11:28:54,405 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 13:29:25] 2025-10-13 11:28:54,405 | INFO     | collected zombie processes
[2025-10-13 13:29:25] 2025-10-13 11:28:54,406 | INFO     | will attempt to kill all subprocesses of pid=716661
[2025-10-13 13:29:25] 2025-10-13 11:28:54,456 | INFO     | process IDs to be killed: [716661] (in reverse order)
[2025-10-13 13:29:25] 2025-10-13 11:28:54,482 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 13:29:25] 2025-10-13 11:28:54,482 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 13:29:25] 2025-10-13 11:28:54,484 | INFO     | did not find any defunct processes belonging to 716661
[2025-10-13 13:29:25] 2025-10-13 11:28:54,485 | INFO     | did not find any defunct processes belonging to 716661
[2025-10-13 13:29:25] 2025-10-13 11:28:54,485 | INFO     | ready for new job
[2025-10-13 13:29:25] 2025-10-13 11:28:54,485 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 13:29:25] 2025-10-13 11:28:54,486 | INFO     | ***************************************
[2025-10-13 13:29:25] 2025-10-13 11:28:54,486 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 13:29:25] 2025-10-13 11:28:54,486 | INFO     | ***************************************
[2025-10-13 13:29:25] 2025-10-13 11:28:54,486 | INFO     | 
[2025-10-13 13:29:25] 2025-10-13 11:28:54,487 | INFO     | architecture information:
[2025-10-13 13:29:25] 2025-10-13 11:28:54,487 | INFO     | executing command: cat /etc/os-release
[2025-10-13 13:29:25] 2025-10-13 11:28:54,495 | INFO     | cat /etc/os-release:
[2025-10-13 13:29:25] NAME="CentOS Linux"
[2025-10-13 13:29:25] VERSION="7 (Core)"
[2025-10-13 13:29:25] ID="centos"
[2025-10-13 13:29:25] ID_LIKE="rhel fedora"
[2025-10-13 13:29:25] VERSION_ID="7"
[2025-10-13 13:29:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 13:29:25] ANSI_COLOR="0;31"
[2025-10-13 13:29:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 13:29:25] HOME_URL="https://www.centos.org/"
[2025-10-13 13:29:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 13:29:25] 
[2025-10-13 13:29:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 13:29:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 13:29:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 13:29:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 13:29:25] 
[2025-10-13 13:29:25] 2025-10-13 11:28:54,495 | INFO     | ***************************************
[2025-10-13 13:29:25] 2025-10-13 11:28:54,998 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 13:29:25] 2025-10-13 11:28:55,007 | INFO     | sufficient remaining disk space (357918834688 B)
[2025-10-13 13:29:25] 2025-10-13 11:28:55,007 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 13:29:25] 2025-10-13 11:28:55,007 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 13:29:25] 2025-10-13 11:28:55,008 | INFO     | update_server=False
[2025-10-13 13:29:25] 2025-10-13 11:28:55,008 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 13:29:25] 2025-10-13 11:28:55,008 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 13:29:25] 2025-10-13 11:28:55,134 | INFO     | all payload control threads have been joined
[2025-10-13 13:29:25] 2025-10-13 11:28:55,282 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 13:29:25] 2025-10-13 11:28:55,282 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 13:29:25] 2025-10-13 11:28:55,282 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 13:29:25] 2025-10-13 11:28:55,282 | INFO     | will abort loop
[2025-10-13 13:29:25] 2025-10-13 11:28:55,958 | INFO     | all data control threads have been joined
[2025-10-13 13:29:25] 2025-10-13 11:28:56,010 | INFO     | [job] queue monitor thread has finished
[2025-10-13 13:29:25] 2025-10-13 11:28:56,012 | INFO     | [job] retrieve thread has finished
[2025-10-13 13:29:25] 2025-10-13 11:28:56,139 | INFO     | [payload] control thread has finished
[2025-10-13 13:29:25] 2025-10-13 11:28:56,168 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 13:29:25] 2025-10-13 11:28:56,287 | INFO     | [job] job monitor thread has finished
[2025-10-13 13:29:25] 2025-10-13 11:28:56,324 | INFO     | [data] copytool_in thread has finished
[2025-10-13 13:29:25] 2025-10-13 11:28:56,660 | INFO     | all job control threads have been joined
[2025-10-13 13:29:25] 2025-10-13 11:28:56,704 | INFO     | [payload] failed_post thread has finished
[2025-10-13 13:29:25] 2025-10-13 11:28:56,812 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 13:29:25] 2025-10-13 11:28:56,834 | INFO     | [job] validate thread has finished
[2025-10-13 13:29:25] 2025-10-13 11:28:56,846 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 13:29:25] 2025-10-13 11:28:56,915 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 13:29:25] 2025-10-13 11:28:56,963 | INFO     | [data] control thread has finished
[2025-10-13 13:29:25] 2025-10-13 11:28:57,582 | INFO     | [payload] validate_post thread has finished
[2025-10-13 13:29:25] 2025-10-13 11:28:57,665 | INFO     | [job] control thread has finished
[2025-10-13 13:29:25] 2025-10-13 11:28:58,173 | INFO     | [data] copytool_out thread has finished
[2025-10-13 13:29:25] 2025-10-13 11:28:58,316 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 13:29:25] 2025-10-13 11:29:02,322 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 13:29:25] 2025-10-13 11:29:05,478 | INFO     | job.realtimelogging is not enabled
[2025-10-13 13:29:25] 2025-10-13 11:29:06,483 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 13:29:25] 2025-10-13 11:29:17,321 | INFO     | [monitor] cgroup control has ended
[2025-10-13 13:29:25] 2025-10-13 11:29:19,308 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139945062377280)>', '<ExcThread(monitor, started 139944571946752)>']
[2025-10-13 13:29:25] 2025-10-13 11:29:24,334 | INFO     | all workflow threads have been joined
[2025-10-13 13:29:25] 2025-10-13 11:29:24,334 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 13:29:25] 2025-10-13 11:29:24,334 | INFO     | traces error code: 0
[2025-10-13 13:29:25] 2025-10-13 11:29:24,334 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 13:29:25] 2025-10-13 11:29:25,851 | INFO     | PID=710193 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 13:29:25] 2025-10-13 11:29:25,851 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 13:29:25] 2025-10-13 11:29:25,851 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 13:29:25] 2025-10-13 11:29:25,851 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 13:29:25] 2025-10-13 11:29:25,851 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 13:29:25] 2025-10-13 11:29:25,851 | INFO     | [monitor] control thread has ended
[2025-10-13 13:29:25] 2025-10-13 11:29:25,898 [wrapper] ==== pilot stdout END ====
[2025-10-13 13:29:25] 2025-10-13 11:29:25,900 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 13:29:25] 2025-10-13 11:29:25,902 [wrapper] pilotpid: 710193
[2025-10-13 13:29:25] 2025-10-13 11:29:25,904 [wrapper] Pilot exit status: 0
[2025-10-13 13:29:25] 2025-10-13 11:29:25,912 [wrapper] pandaids: 6840851845
[2025-10-13 13:29:25] 2025-10-13 11:29:25,929 [wrapper] cleanup supervisor_pilot  738241 710194
[2025-10-13 13:29:25] 2025-10-13 11:29:25,932 [wrapper] Test setup, not cleaning
[2025-10-13 13:29:25] 2025-10-13 11:29:25,934 [wrapper] apfmon messages muted
[2025-10-13 13:29:25] 2025-10-13 11:29:25,936 [wrapper] ==== wrapper stdout END ====
[2025-10-13 13:29:25] 2025-10-13 11:29:25,939 [wrapper] ==== wrapper stderr END ====
[2025-10-13 13:29:25]  *** Error codes and diagnostics ***
[2025-10-13 13:29:25]     "exeErrorCode": 0,
[2025-10-13 13:29:25]     "exeErrorDiag": "",
[2025-10-13 13:29:25]     "pilotErrorCode": 0,
[2025-10-13 13:29:25]     "pilotErrorDiag": "",
[2025-10-13 13:29:25]  *** Listing of results directory ***
[2025-10-13 13:29:25] total 409832
[2025-10-13 13:29:25] -rw-r--r-- 1 boinc boinc    557409 Oct 12 23:57 pilot3.tar.gz
[2025-10-13 13:29:25] -rw-r--r-- 1 boinc boinc      5112 Oct 13 00:22 queuedata.json
[2025-10-13 13:29:25] -rwx------ 1 boinc boinc     36292 Oct 13 00:23 runpilot2-wrapper.sh
[2025-10-13 13:29:25] -rw-r--r-- 1 boinc boinc       100 Oct 13 12:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 13:29:25] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 12:04 run_atlas
[2025-10-13 13:29:25] -rw-r--r-- 1 boinc boinc       105 Oct 13 12:04 job.xml
[2025-10-13 13:29:25] -rw-r--r-- 2 boinc boinc 221097592 Oct 13 12:04 EVNT.46676267._004612.pool.root.1
[2025-10-13 13:29:25] drwxrwx--x 2 boinc boinc      4096 Oct 13 12:04 shared
[2025-10-13 13:29:25] -rw-r--r-- 2 boinc boinc    569684 Oct 13 12:04 input.tar.gz
[2025-10-13 13:29:25] -rw-r--r-- 2 boinc boinc     15120 Oct 13 12:04 start_atlas.sh
[2025-10-13 13:29:25] -rw-r--r-- 1 boinc boinc         0 Oct 13 12:04 boinc_setup_complete
[2025-10-13 13:29:25] -rw-r--r-- 1 boinc boinc      6441 Oct 13 12:04 init_data.xml
[2025-10-13 13:29:25] -rw-r--r-- 1 boinc boinc         0 Oct 13 12:04 boinc_lockfile
[2025-10-13 13:29:25] -rw-r--r-- 1 boinc boinc      2550 Oct 13 12:04 pandaJob.out
[2025-10-13 13:29:25] -rw------- 1 boinc boinc    972849 Oct 13 12:04 agis_schedconf.cvmfs.json
[2025-10-13 13:29:25] -rw------- 1 boinc boinc   1560580 Oct 13 12:04 agis_ddmendpoints.agis.ALL.json
[2025-10-13 13:29:25] drwx------ 5 boinc boinc      4096 Oct 13 12:04 pilot3
[2025-10-13 13:29:25] -rw------- 1 boinc boinc 192652993 Oct 13 13:28 HITS.46676269._091024.pool.root.1
[2025-10-13 13:29:25] -rw-r--r-- 1 boinc boinc       529 Oct 13 13:28 boinc_task_state.xml
[2025-10-13 13:29:25] -rw------- 1 boinc boinc        95 Oct 13 13:28 pilot_heartbeat.json
[2025-10-13 13:29:25] -rw------- 1 boinc boinc      1016 Oct 13 13:28 memory_monitor_summary.json
[2025-10-13 13:29:25] -rw------- 1 boinc boinc    266584 Oct 13 13:28 log.46676269._091024.job.log.tgz.1
[2025-10-13 13:29:25] -rw------- 1 boinc boinc      7757 Oct 13 13:28 heartbeat.json
[2025-10-13 13:29:25] -rw-r--r-- 1 boinc boinc      8192 Oct 13 13:28 boinc_mmap_file
[2025-10-13 13:29:25] -rw-r--r-- 1 boinc boinc        27 Oct 13 13:28 wrapper_checkpoint.txt
[2025-10-13 13:29:25] -rw------- 1 boinc boinc       746 Oct 13 13:29 pilotlog.txt
[2025-10-13 13:29:25] -rw------- 1 boinc boinc    744505 Oct 13 13:29 log.46676269._091024.job.log.1
[2025-10-13 13:29:25] -rw------- 1 boinc boinc       357 Oct 13 13:29 output.list
[2025-10-13 13:29:25] -rw-r--r-- 1 boinc boinc       620 Oct 13 13:29 runtime_log
[2025-10-13 13:29:25] -rw------- 1 boinc boinc   1034240 Oct 13 13:29 result.tar.gz
[2025-10-13 13:29:25] -rw------- 1 boinc boinc       661 Oct 13 13:29 y4NMDmoeJS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmqqlNDmdAFaYm.diag
[2025-10-13 13:29:25] -rw-r--r-- 1 boinc boinc      8787 Oct 13 13:29 runtime_log.err
[2025-10-13 13:29:25] -rw-r--r-- 1 boinc boinc     22158 Oct 13 13:29 stderr.txt
[2025-10-13 13:29:25] HITS file was successfully produced:
[2025-10-13 13:29:25] -rw------- 1 boinc boinc 192652993 Oct 13 13:28 shared/HITS.pool.root.1
[2025-10-13 13:29:25]  *** Contents of shared directory: ***
[2025-10-13 13:29:25] total 405644
[2025-10-13 13:29:25] -rw-r--r-- 2 boinc boinc 221097592 Oct 13 12:04 ATLAS.root_0
[2025-10-13 13:29:25] -rw-r--r-- 2 boinc boinc    569684 Oct 13 12:04 input.tar.gz
[2025-10-13 13:29:25] -rw-r--r-- 2 boinc boinc     15120 Oct 13 12:04 start_atlas.sh
[2025-10-13 13:29:25] -rw------- 1 boinc boinc 192652993 Oct 13 13:28 HITS.pool.root.1
[2025-10-13 13:29:25] -rw------- 1 boinc boinc   1034240 Oct 13 13:29 result.tar.gz
13:29:27 (706469): run_atlas exited; CPU time 14548.144165
13:29:27 (706469): called boinc_finish(0)

</stderr_txt>
]]>

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