Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:01:43 (4224): wrapper (7.7.26015): starting
06:01:43 (4224): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 06:01:43] Arguments: --nthreads 12
[2025-10-13 06:01:43] Threads: 12
[2025-10-13 06:01:43] Checking for CVMFS
[2025-10-13 06:01:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 06:01:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 06:01:43] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 06:01:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 06:01:43] 2.11.2.0 2925 224175 101396 151656 3 57 17362511 20275201 1 130560 1 111362736 99.984 13343268 12661 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 06:01:43] CVMFS is ok
[2025-10-13 06:01:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 06:01:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 06:01:43] Further information can be found at the LHC@home message board.
[2025-10-13 06:01:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 06:01:43] Checking for apptainer binary...
[2025-10-13 06:01:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 06:01:43] Running /usr/bin/apptainer --version
[2025-10-13 06:01:43] apptainer version 1.3.2-1.el7
[2025-10-13 06:01:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 06:01:45] c-205-9.aglt2.org
[2025-10-13 06:01:45] apptainer works
[2025-10-13 06:01:45] Set ATHENA_PROC_NUMBER=12
[2025-10-13 06:01:45] Set ATHENA_CORE_NUMBER=12
[2025-10-13 06:01:45] Starting ATLAS job with PandaID=6842758683
[2025-10-13 06:01:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 07:20:14]  *** The last 200 lines of the pilot log: ***
[2025-10-13 07:20:14]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6842758683/log.46676269._096551.job.log.tgz.1
[2025-10-13 07:20:14]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ac/46/log.46676269._096551.job.log.tgz.1
[2025-10-13 07:20:14]  workdir=None
[2025-10-13 07:20:14] ]
[2025-10-13 07:20:14] 2025-10-13 11:19:09,417 | INFO     | transferring file log.46676269._096551.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6842758683/log.46676269._096551.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-13 07:20:14] 2025-10-13 11:19:09,417 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6842758683/log.46676269._096551.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._096551.job
[2025-10-13 07:20:14] 2025-10-13 11:19:09,439 | INFO     | adding to output.list: log.46676269._096551.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ac/46/log.46676269._096551.job.log.tg
[2025-10-13 07:20:14] 2025-10-13 11:19:09,440 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 07:20:14] 2025-10-13 11:19:09,440 | INFO     | summary of transferred files:
[2025-10-13 07:20:14] 2025-10-13 11:19:09,440 | INFO     |  -- lfn=log.46676269._096551.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 07:20:14] 2025-10-13 11:19:09,441 | INFO     | stage-out finished correctly
[2025-10-13 07:20:14] 2025-10-13 11:19:09,562 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 07:20:14] 2025-10-13 11:19:09,790 | INFO     | time since job start (4629s) is within the limit (172800.0s)
[2025-10-13 07:20:14] 2025-10-13 11:19:09,920 | WARNING  | process 14423 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 07:20:14] 2025-10-13 11:19:09,920 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6842758683/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 07:20:14] 2025-10-13 11:19:10,006 | INFO     | number of running child processes to parent process 14423: 1
[2025-10-13 07:20:14] 2025-10-13 11:19:10,006 | INFO     | maximum number of monitored processes: 6
[2025-10-13 07:20:14] 2025-10-13 11:19:11,314 | INFO     | job 6842758683 has state=finished
[2025-10-13 07:20:14] 2025-10-13 11:19:11,314 | INFO     | preparing for final server update for job 6842758683 in state='finished'
[2025-10-13 07:20:14] 2025-10-13 11:19:11,315 | INFO     | this job has now completed (state=finished)
[2025-10-13 07:20:14] 2025-10-13 11:19:11,315 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 07:20:14] 2025-10-13 11:19:11,316 | INFO     | log transfer has been attempted: DONE
[2025-10-13 07:20:14] 2025-10-13 11:19:11,316 | INFO     | job 6842758683 has finished - writing final server update
[2025-10-13 07:20:14] 2025-10-13 11:19:11,316 | INFO     | total number of processed events: 400 (read)
[2025-10-13 07:20:14] 2025-10-13 11:19:11,317 | INFO     | executing command: lscpu
[2025-10-13 07:20:14] 2025-10-13 11:19:11,343 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 07:20:14] 2025-10-13 11:19:11,796 | INFO     | time since job start (4631s) is within the limit (172800.0s)
[2025-10-13 07:20:14] 2025-10-13 11:19:12,509 | INFO     | monitor loop #345: job 0:6842758683 is in state 'finished'
[2025-10-13 07:20:14] 2025-10-13 11:19:12,509 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 07:20:14] 2025-10-13 11:19:13,802 | INFO     | time since job start (4633s) is within the limit (172800.0s)
[2025-10-13 07:20:14] 2025-10-13 11:19:15,013 | INFO     | monitor loop #346: job 0:6842758683 is in state 'finished'
[2025-10-13 07:20:14] 2025-10-13 11:19:15,013 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 07:20:14] 2025-10-13 11:19:15,804 | INFO     | time since job start (4635s) is within the limit (172800.0s)
[2025-10-13 07:20:14] 2025-10-13 11:19:17,429 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-13 07:20:14] 2025-10-13 11:19:17,433 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1706.9166666666667
[2025-10-13 07:20:14] 2025-10-13 11:19:17,436 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6842758683/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 07:20:14] 2025-10-13 11:19:17,437 | INFO     | extracted standard info from prmon json
[2025-10-13 07:20:14] 2025-10-13 11:19:17,437 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 07:20:14] 2025-10-13 11:19:17,437 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 07:20:14] 2025-10-13 11:19:17,438 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 07:20:14] 2025-10-13 11:19:17,438 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 07:20:14] 2025-10-13 11:19:17,440 | INFO     | fitting pss+swap vs Time
[2025-10-13 07:20:14] 2025-10-13 11:19:17,440 | INFO     | sum of square deviations: 101843770.0
[2025-10-13 07:20:14] 2025-10-13 11:19:17,440 | INFO     | sum of deviations: 2130821377.9999998
[2025-10-13 07:20:14] 2025-10-13 11:19:17,441 | INFO     | mean x: 1760352128.0
[2025-10-13 07:20:14] 2025-10-13 11:19:17,441 | INFO     | mean y: 2671331.8695652173
[2025-10-13 07:20:14] 2025-10-13 11:19:17,441 | INFO     | -- intersect: -36828211373.57419
[2025-10-13 07:20:14] 2025-10-13 11:19:17,441 | INFO     | intersect: -36828211373.57419
[2025-10-13 07:20:14] 2025-10-13 11:19:17,441 | INFO     | chi2: 0.06578422653627852
[2025-10-13 07:20:14] 2025-10-13 11:19:17,441 | INFO     | -- intersect: -36828211373.57419
[2025-10-13 07:20:14] 2025-10-13 11:19:17,441 | INFO     | current memory leak: 20.92 B/s (using 69 data points, chi2=0.07)
[2025-10-13 07:20:14] 2025-10-13 11:19:17,442 | INFO     | could have reported an average CPU frequency of 2032 MHz (6 samples)
[2025-10-13 07:20:14] 2025-10-13 11:19:17,442 | INFO     | ..............................
[2025-10-13 07:20:14] 2025-10-13 11:19:17,442 | INFO     | . Timing measurements:
[2025-10-13 07:20:14] 2025-10-13 11:19:17,442 | INFO     | . get job = 0 s
[2025-10-13 07:20:14] 2025-10-13 11:19:17,442 | INFO     | . initial setup = 2 s
[2025-10-13 07:20:14] 2025-10-13 11:19:17,442 | INFO     | . payload setup = 7 s
[2025-10-13 07:20:14] 2025-10-13 11:19:17,442 | INFO     | . stage-in = 0 s
[2025-10-13 07:20:14] 2025-10-13 11:19:17,443 | INFO     | . payload execution = 4601 s
[2025-10-13 07:20:14] 2025-10-13 11:19:17,443 | INFO     | . stage-out = 0 s
[2025-10-13 07:20:14] 2025-10-13 11:19:17,443 | INFO     | . log creation = 0 s
[2025-10-13 07:20:14] 2025-10-13 11:19:17,443 | INFO     | ..............................
[2025-10-13 07:20:14] 2025-10-13 11:19:17,810 | INFO     | time since job start (4637s) is within the limit (172800.0s)
[2025-10-13 07:20:14] 2025-10-13 11:19:17,852 | INFO     | 
[2025-10-13 07:20:14] 2025-10-13 11:19:17,853 | INFO     | job summary report
[2025-10-13 07:20:14] 2025-10-13 11:19:17,853 | INFO     | --------------------------------------------------
[2025-10-13 07:20:14] 2025-10-13 11:19:17,853 | INFO     | PanDA job id: 6842758683
[2025-10-13 07:20:14] 2025-10-13 11:19:17,853 | INFO     | task id: 46676269
[2025-10-13 07:20:14] 2025-10-13 11:19:17,853 | INFO     | errors: (none)
[2025-10-13 07:20:14] 2025-10-13 11:19:17,854 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 07:20:14] 2025-10-13 11:19:17,854 | INFO     | pilot state: finished 
[2025-10-13 07:20:14] 2025-10-13 11:19:17,854 | INFO     | transexitcode: 0
[2025-10-13 07:20:14] 2025-10-13 11:19:17,854 | INFO     | exeerrorcode: 0
[2025-10-13 07:20:14] 2025-10-13 11:19:17,854 | INFO     | exeerrordiag: 
[2025-10-13 07:20:14] 2025-10-13 11:19:17,854 | INFO     | exitcode: 0
[2025-10-13 07:20:14] 2025-10-13 11:19:17,855 | INFO     | exitmsg: OK
[2025-10-13 07:20:14] 2025-10-13 11:19:17,855 | INFO     | cpuconsumptiontime: 47945 s
[2025-10-13 07:20:14] 2025-10-13 11:19:17,855 | INFO     | nevents: 400
[2025-10-13 07:20:14] 2025-10-13 11:19:17,855 | INFO     | neventsw: 0
[2025-10-13 07:20:14] 2025-10-13 11:19:17,855 | INFO     | pid: 14423
[2025-10-13 07:20:14] 2025-10-13 11:19:17,855 | INFO     | pgrp: 14423
[2025-10-13 07:20:14] 2025-10-13 11:19:17,855 | INFO     | corecount: 12
[2025-10-13 07:20:14] 2025-10-13 11:19:17,856 | INFO     | event service: False
[2025-10-13 07:20:14] 2025-10-13 11:19:17,856 | INFO     | sizes: {0: 2348806, 5: 2349068, 11: 2349124, 4612: 2375256, 4613: 2384310, 4621: 2384448}
[2025-10-13 07:20:14] 2025-10-13 11:19:17,856 | INFO     | --------------------------------------------------
[2025-10-13 07:20:14] 2025-10-13 11:19:17,856 | INFO     | 
[2025-10-13 07:20:14] 2025-10-13 11:19:17,856 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 07:20:14] 2025-10-13 11:19:17,880 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 07:20:14] 2025-10-13 11:19:17,881 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 07:20:14] 2025-10-13 11:19:17,881 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 07:20:14] 2025-10-13 11:19:17,881 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 07:20:14] 2025-10-13 11:19:17,881 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 07:20:14] 2025-10-13 11:19:17,882 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 07:20:14] 2025-10-13 11:19:17,882 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 07:20:14] 2025-10-13 11:19:17,882 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 07:20:14] 2025-10-13 11:19:17,882 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 07:20:14] 2025-10-13 11:19:17,882 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 07:20:14] 2025-10-13 11:19:17,882 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 07:20:14] 2025-10-13 11:19:17,883 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 07:20:14] 2025-10-13 11:19:17,883 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 07:20:14] 2025-10-13 11:19:17,883 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 07:20:14] 2025-10-13 11:19:17,883 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 07:20:14] 2025-10-13 11:19:17,883 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 07:20:14] 2025-10-13 11:19:17,883 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 07:20:14] 2025-10-13 11:19:17,884 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 07:20:14] 2025-10-13 11:19:17,884 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 07:20:14] 2025-10-13 11:19:17,884 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 07:20:14] 2025-10-13 11:19:17,884 | INFO     | job 6842758683 has completed (purged errors)
[2025-10-13 07:20:14] 2025-10-13 11:19:17,884 | INFO     | overall cleanup function is called
[2025-10-13 07:20:14] 2025-10-13 11:19:18,893 | INFO     | --- collectZombieJob: --- 10, [14423]
[2025-10-13 07:20:14] 2025-10-13 11:19:18,893 | INFO     | zombie collector waiting for pid 14423
[2025-10-13 07:20:14] 2025-10-13 11:19:18,893 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 07:20:14] 2025-10-13 11:19:18,894 | INFO     | collected zombie processes
[2025-10-13 07:20:14] 2025-10-13 11:19:18,894 | INFO     | will attempt to kill all subprocesses of pid=14423
[2025-10-13 07:20:14] 2025-10-13 11:19:18,974 | INFO     | PID=7965 has CPU usage=7.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-13 07:20:14] 2025-10-13 11:19:19,025 | INFO     | process IDs to be killed: [14423] (in reverse order)
[2025-10-13 07:20:14] 2025-10-13 11:19:19,078 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 07:20:14] 2025-10-13 11:19:19,078 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 07:20:14] 2025-10-13 11:19:19,081 | INFO     | did not find any defunct processes belonging to 14423
[2025-10-13 07:20:14] 2025-10-13 11:19:19,083 | INFO     | did not find any defunct processes belonging to 14423
[2025-10-13 07:20:14] 2025-10-13 11:19:19,083 | INFO     | ready for new job
[2025-10-13 07:20:14] 2025-10-13 11:19:19,083 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 07:20:14] 2025-10-13 11:19:19,085 | INFO     | ***************************************
[2025-10-13 07:20:14] 2025-10-13 11:19:19,085 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 07:20:14] 2025-10-13 11:19:19,085 | INFO     | ***************************************
[2025-10-13 07:20:14] 2025-10-13 11:19:19,085 | INFO     | 
[2025-10-13 07:20:14] 2025-10-13 11:19:19,086 | INFO     | architecture information:
[2025-10-13 07:20:14] 2025-10-13 11:19:19,086 | INFO     | executing command: cat /etc/os-release
[2025-10-13 07:20:14] 2025-10-13 11:19:19,102 | INFO     | cat /etc/os-release:
[2025-10-13 07:20:14] NAME="CentOS Linux"
[2025-10-13 07:20:14] VERSION="7 (Core)"
[2025-10-13 07:20:14] ID="centos"
[2025-10-13 07:20:14] ID_LIKE="rhel fedora"
[2025-10-13 07:20:14] VERSION_ID="7"
[2025-10-13 07:20:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 07:20:14] ANSI_COLOR="0;31"
[2025-10-13 07:20:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 07:20:14] HOME_URL="https://www.centos.org/"
[2025-10-13 07:20:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 07:20:14] 
[2025-10-13 07:20:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 07:20:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 07:20:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 07:20:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 07:20:14] 
[2025-10-13 07:20:14] 2025-10-13 11:19:19,103 | INFO     | ***************************************
[2025-10-13 07:20:14] 2025-10-13 11:19:19,606 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 07:20:14] 2025-10-13 11:19:19,623 | INFO     | sufficient remaining disk space (29356982272 B)
[2025-10-13 07:20:14] 2025-10-13 11:19:19,623 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 07:20:14] 2025-10-13 11:19:19,624 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 07:20:14] 2025-10-13 11:19:19,624 | INFO     | update_server=False
[2025-10-13 07:20:14] 2025-10-13 11:19:19,624 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 07:20:14] 2025-10-13 11:19:19,624 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-13 07:20:14] 2025-10-13 11:19:19,625 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 07:20:14] 2025-10-13 11:19:19,625 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 07:20:14] 2025-10-13 11:19:19,625 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 07:20:14] 2025-10-13 11:19:20,024 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 07:20:14] 2025-10-13 11:19:20,024 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 07:20:14] 2025-10-13 11:19:20,024 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:20:14] 2025-10-13 11:19:20,025 | INFO     | will abort loop
[2025-10-13 07:20:14] 2025-10-13 11:19:20,038 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 07:20:14] 2025-10-13 11:19:20,150 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 07:20:14] 2025-10-13 11:19:20,425 | INFO     | all job control threads have been joined
[2025-10-13 07:20:14] 2025-10-13 11:19:20,629 | INFO     | [job] retrieve thread has finished
[2025-10-13 07:20:14] 2025-10-13 11:19:20,662 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 07:20:14] 2025-10-13 11:19:20,696 | INFO     | all data control threads have been joined
[2025-10-13 07:20:14] 2025-10-13 11:19:20,697 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 07:20:14] 2025-10-13 11:19:20,823 | INFO     | [payload] validate_post thread has finished
[2025-10-13 07:20:14] 2025-10-13 11:19:20,873 | INFO     | [payload] failed_post thread has finished
[2025-10-13 07:20:14] 2025-10-13 11:19:21,030 | INFO     | [job] job monitor thread has finished
[2025-10-13 07:20:14] 2025-10-13 11:19:21,107 | INFO     | all payload control threads have been joined
[2025-10-13 07:20:14] 2025-10-13 11:19:21,359 | INFO     | [data] copytool_in thread has finished
[2025-10-13 07:20:14] 2025-10-13 11:19:21,430 | INFO     | [job] control thread has finished
[2025-10-13 07:20:14] 2025-10-13 11:19:21,567 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 07:20:14] 2025-10-13 11:19:21,639 | INFO     | [job] validate thread has finished
[2025-10-13 07:20:14] 2025-10-13 11:19:21,701 | INFO     | [data] control thread has finished
[2025-10-13 07:20:14] 2025-10-13 11:19:21,850 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 07:20:14] 2025-10-13 11:19:22,043 | INFO     | [data] copytool_out thread has finished
[2025-10-13 07:20:14] 2025-10-13 11:19:22,112 | INFO     | [payload] control thread has finished
[2025-10-13 07:20:14] 2025-10-13 11:19:22,544 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:20:14] 2025-10-13 11:19:23,550 | INFO     | [job] queue monitor thread has finished
[2025-10-13 07:20:14] 2025-10-13 11:19:24,156 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 07:20:14] 2025-10-13 11:20:07,304 | INFO     | [monitor] cgroup control has ended
[2025-10-13 07:20:14] 2025-10-13 11:20:09,023 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139956894066496)>', '<ExcThread(monitor, started 139956324390656)>']
[2025-10-13 07:20:14] 2025-10-13 11:20:09,875 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 07:20:14] 2025-10-13 11:20:09,875 | INFO     | [monitor] control thread has ended
[2025-10-13 07:20:14] 2025-10-13 11:20:14,048 | INFO     | all workflow threads have been joined
[2025-10-13 07:20:14] 2025-10-13 11:20:14,048 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 07:20:14] 2025-10-13 11:20:14,049 | INFO     | traces error code: 0
[2025-10-13 07:20:14] 2025-10-13 11:20:14,049 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 07:20:14] 2025-10-13 11:20:14,148 [wrapper] ==== pilot stdout END ====
[2025-10-13 07:20:14] 2025-10-13 11:20:14,152 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 07:20:14] 2025-10-13 11:20:14,155 [wrapper] pilotpid: 7965
[2025-10-13 07:20:14] 2025-10-13 11:20:14,159 [wrapper] Pilot exit status: 0
[2025-10-13 07:20:14] 2025-10-13 11:20:14,176 [wrapper] pandaids: 6842758683
[2025-10-13 07:20:14] 2025-10-13 11:20:14,223 [wrapper] cleanup supervisor_pilot 12496 7966
[2025-10-13 07:20:14] 2025-10-13 11:20:14,227 [wrapper] Test setup, not cleaning
[2025-10-13 07:20:14] 2025-10-13 11:20:14,231 [wrapper] apfmon messages muted
[2025-10-13 07:20:14] 2025-10-13 11:20:14,235 [wrapper] ==== wrapper stdout END ====
[2025-10-13 07:20:14] 2025-10-13 11:20:14,238 [wrapper] ==== wrapper stderr END ====
[2025-10-13 07:20:14]  *** Error codes and diagnostics ***
[2025-10-13 07:20:14]     "exeErrorCode": 0,
[2025-10-13 07:20:14]     "exeErrorDiag": "",
[2025-10-13 07:20:14]     "pilotErrorCode": 0,
[2025-10-13 07:20:14]     "pilotErrorDiag": "",
[2025-10-13 07:20:14]  *** Listing of results directory ***
[2025-10-13 07:20:14] total 414460
[2025-10-13 07:20:14] -rw-r--r-- 1 boincer umatlas    557409 Oct 13 05:05 pilot3.tar.gz
[2025-10-13 07:20:14] -rw-r--r-- 1 boincer umatlas      5112 Oct 13 05:13 queuedata.json
[2025-10-13 07:20:14] -rwx------ 1 boincer umatlas     36292 Oct 13 05:17 runpilot2-wrapper.sh
[2025-10-13 07:20:14] -rw-r--r-- 1 boincer umatlas       100 Oct 13 06:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 07:20:14] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 06:01 run_atlas
[2025-10-13 07:20:14] -rw-r--r-- 1 boincer umatlas       105 Oct 13 06:01 job.xml
[2025-10-13 07:20:14] -rw-r--r-- 2 boincer umatlas 221605548 Oct 13 06:01 EVNT.46676267._004616.pool.root.1
[2025-10-13 07:20:14] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 06:01 start_atlas.sh
[2025-10-13 07:20:14] drwxrwx--x 2 boincer umatlas      4096 Oct 13 06:01 shared
[2025-10-13 07:20:14] -rw-r--r-- 2 boincer umatlas    569683 Oct 13 06:01 input.tar.gz
[2025-10-13 07:20:14] -rw-r--r-- 1 boincer umatlas         0 Oct 13 06:01 boinc_lockfile
[2025-10-13 07:20:14] -rw-r--r-- 1 boincer umatlas      2549 Oct 13 06:01 pandaJob.out
[2025-10-13 07:20:14] -rw------- 1 boincer umatlas    972849 Oct 13 06:01 agis_schedconf.cvmfs.json
[2025-10-13 07:20:14] -rw------- 1 boincer umatlas   1560580 Oct 13 06:01 agis_ddmendpoints.agis.ALL.json
[2025-10-13 07:20:14] drwx------ 5 boincer umatlas      4096 Oct 13 06:02 pilot3
[2025-10-13 07:20:14] -rw-r--r-- 1 boincer umatlas      5952 Oct 13 07:09 init_data.xml
[2025-10-13 07:20:14] -rw------- 1 boincer umatlas 196796228 Oct 13 07:18 HITS.46676269._096551.pool.root.1
[2025-10-13 07:20:14] -rw-r--r-- 1 boincer umatlas       530 Oct 13 07:18 boinc_task_state.xml
[2025-10-13 07:20:14] -rw------- 1 boincer umatlas        95 Oct 13 07:19 pilot_heartbeat.json
[2025-10-13 07:20:14] -rw------- 1 boincer umatlas      1051 Oct 13 07:19 memory_monitor_summary.json
[2025-10-13 07:20:14] -rw------- 1 boincer umatlas    383443 Oct 13 07:19 log.46676269._096551.job.log.tgz.1
[2025-10-13 07:20:14] -rw------- 1 boincer umatlas      7853 Oct 13 07:19 heartbeat.json
[2025-10-13 07:20:14] -rw-r--r-- 1 boincer umatlas        27 Oct 13 07:19 wrapper_checkpoint.txt
[2025-10-13 07:20:14] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 07:19 boinc_mmap_file
[2025-10-13 07:20:14] -rw------- 1 boincer umatlas      4738 Oct 13 07:20 pilotlog.txt
[2025-10-13 07:20:14] -rw------- 1 boincer umatlas    671858 Oct 13 07:20 log.46676269._096551.job.log.1
[2025-10-13 07:20:14] -rw------- 1 boincer umatlas       357 Oct 13 07:20 output.list
[2025-10-13 07:20:14] -rw-r--r-- 1 boincer umatlas       620 Oct 13 07:20 runtime_log
[2025-10-13 07:20:14] -rw------- 1 boincer umatlas   1075200 Oct 13 07:20 result.tar.gz
[2025-10-13 07:20:14] -rw-r--r-- 1 boincer umatlas      8700 Oct 13 07:20 runtime_log.err
[2025-10-13 07:20:14] -rw------- 1 boincer umatlas       658 Oct 13 07:20 JFLNDm9qTS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmBkmNDmtcNMmm.diag
[2025-10-13 07:20:14] -rw-r--r-- 1 boincer umatlas     22274 Oct 13 07:20 stderr.txt
[2025-10-13 07:20:14] HITS file was successfully produced:
[2025-10-13 07:20:14] -rw------- 1 boincer umatlas 196796228 Oct 13 07:18 shared/HITS.pool.root.1
[2025-10-13 07:20:14]  *** Contents of shared directory: ***
[2025-10-13 07:20:14] total 410224
[2025-10-13 07:20:14] -rw-r--r-- 2 boincer umatlas 221605548 Oct 13 06:01 ATLAS.root_0
[2025-10-13 07:20:14] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 06:01 start_atlas.sh
[2025-10-13 07:20:14] -rw-r--r-- 2 boincer umatlas    569683 Oct 13 06:01 input.tar.gz
[2025-10-13 07:20:14] -rw------- 1 boincer umatlas 196796228 Oct 13 07:18 HITS.pool.root.1
[2025-10-13 07:20:14] -rw------- 1 boincer umatlas   1075200 Oct 13 07:20 result.tar.gz
07:20:15 (4224): run_atlas exited; CPU time 47912.037295
07:20:15 (4224): called boinc_finish(0)

</stderr_txt>
]]>

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