Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:00:03 (12545): wrapper (7.7.26015): starting
06:00:03 (12545): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 06:00:03] Arguments: --nthreads 8
[2025-10-13 06:00:03] Threads: 8
[2025-10-13 06:00:03] Checking for CVMFS
[2025-10-13 06:00:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 06:00:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 06:00:03] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 06:00:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 06:00:03] 2.11.2.0 2843 4127 71316 151656 1 57 13333057 20275201 1 130560 0 2915694 99.990 140986 35405 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 06:00:03] CVMFS is ok
[2025-10-13 06:00:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 06:00:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 06:00:03] Further information can be found at the LHC@home message board.
[2025-10-13 06:00:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 06:00:03] Checking for apptainer binary...
[2025-10-13 06:00:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 06:00:03] Running /usr/bin/apptainer --version
[2025-10-13 06:00:03] apptainer version 1.3.2-1.el7
[2025-10-13 06:00:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 06:00:05] c-204-34.aglt2.org
[2025-10-13 06:00:05] apptainer works
[2025-10-13 06:00:05] Set ATHENA_PROC_NUMBER=8
[2025-10-13 06:00:05] Set ATHENA_CORE_NUMBER=8
[2025-10-13 06:00:05] Starting ATLAS job with PandaID=6842790187
[2025-10-13 06:00:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 08:03:40]  *** The last 200 lines of the pilot log: ***
[2025-10-13 08:03:40] 2025-10-13 12:02:41,340 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 08:03:40] 2025-10-13 12:02:41,340 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 08:03:40] 2025-10-13 12:02:41,343 | INFO     | fitting pss+swap vs Time
[2025-10-13 08:03:40] 2025-10-13 12:02:41,343 | INFO     | sum of square deviations: 535786790.0
[2025-10-13 08:03:40] 2025-10-13 12:02:41,344 | INFO     | sum of deviations: 20712284558.5
[2025-10-13 08:03:40] 2025-10-13 12:02:41,344 | INFO     | mean x: 1760353282.5
[2025-10-13 08:03:40] 2025-10-13 12:02:41,344 | INFO     | mean y: 2480403.941666667
[2025-10-13 08:03:40] 2025-10-13 12:02:41,344 | INFO     | -- intersect: -68048727261.38644
[2025-10-13 08:03:40] 2025-10-13 12:02:41,345 | INFO     | intersect: -68048727261.38644
[2025-10-13 08:03:40] 2025-10-13 12:02:41,345 | INFO     | chi2: 1.3774335670897
[2025-10-13 08:03:40] 2025-10-13 12:02:41,345 | INFO     | sum of square deviations: 471562330.0
[2025-10-13 08:03:40] 2025-10-13 12:02:41,346 | INFO     | sum of deviations: 19724865267.0
[2025-10-13 08:03:40] 2025-10-13 12:02:41,346 | INFO     | mean x: 1760353130.0
[2025-10-13 08:03:40] 2025-10-13 12:02:41,346 | INFO     | mean y: 2478057.7217391306
[2025-10-13 08:03:40] 2025-10-13 12:02:41,346 | INFO     | -- intersect: -73630902097.11746
[2025-10-13 08:03:40] 2025-10-13 12:02:41,346 | INFO     | intersect: -73630902097.11746
[2025-10-13 08:03:40] 2025-10-13 12:02:41,346 | INFO     | chi2: 1.37829841436629
[2025-10-13 08:03:40] 2025-10-13 12:02:41,346 | INFO     | current chi2=1.37829841436629 (change=-0.06278685936318955 %)
[2025-10-13 08:03:40] 2025-10-13 12:02:41,347 | INFO     | right removable region: 114
[2025-10-13 08:03:40] 2025-10-13 12:02:41,347 | INFO     | sum of square deviations: 471562330.0
[2025-10-13 08:03:40] 2025-10-13 12:02:41,347 | INFO     | sum of deviations: 4015614628.0000005
[2025-10-13 08:03:40] 2025-10-13 12:02:41,347 | INFO     | mean x: 1760353435.0
[2025-10-13 08:03:40] 2025-10-13 12:02:41,348 | INFO     | mean y: 2519226.0608695652
[2025-10-13 08:03:40] 2025-10-13 12:02:41,348 | INFO     | -- intersect: -14987866040.794622
[2025-10-13 08:03:40] 2025-10-13 12:02:41,348 | INFO     | intersect: -14987866040.794622
[2025-10-13 08:03:40] 2025-10-13 12:02:41,348 | INFO     | chi2: 0.04416685444365036
[2025-10-13 08:03:40] 2025-10-13 12:02:41,348 | INFO     | current chi2=0.04416685444365036 (change=96.79354013878375 %)
[2025-10-13 08:03:40] 2025-10-13 12:02:41,349 | INFO     | sum of square deviations: 412686807.5
[2025-10-13 08:03:40] 2025-10-13 12:02:41,349 | INFO     | sum of deviations: 989703070.4999999
[2025-10-13 08:03:40] 2025-10-13 12:02:41,349 | INFO     | mean x: 1760353587.5
[2025-10-13 08:03:40] 2025-10-13 12:02:41,349 | INFO     | mean y: 2526895.118181818
[2025-10-13 08:03:40] 2025-10-13 12:02:41,349 | INFO     | -- intersect: -4219142707.7184443
[2025-10-13 08:03:40] 2025-10-13 12:02:41,350 | INFO     | intersect: -4219142707.7184443
[2025-10-13 08:03:40] 2025-10-13 12:02:41,350 | INFO     | chi2: 0.0010116671600550492
[2025-10-13 08:03:40] 2025-10-13 12:02:41,350 | INFO     | current chi2=0.0010116671600550492 (change=97.70944258358773 %)
[2025-10-13 08:03:40] 2025-10-13 12:02:41,350 | INFO     | sum of square deviations: 358927660.0
[2025-10-13 08:03:40] 2025-10-13 12:02:41,351 | INFO     | sum of deviations: 1065000768.9999999
[2025-10-13 08:03:40] 2025-10-13 12:02:41,351 | INFO     | mean x: 1760353740.0
[2025-10-13 08:03:40] 2025-10-13 12:02:41,351 | INFO     | mean y: 2526669.038095238
[2025-10-13 08:03:40] 2025-10-13 12:02:41,351 | INFO     | -- intersect: -5220748925.860402
[2025-10-13 08:03:40] 2025-10-13 12:02:41,351 | INFO     | intersect: -5220748925.860402
[2025-10-13 08:03:40] 2025-10-13 12:02:41,351 | INFO     | chi2: 0.0007733467402092162
[2025-10-13 08:03:40] 2025-10-13 12:02:41,352 | INFO     | current chi2=0.0007733467402092162 (change=23.557196403693183 %)
[2025-10-13 08:03:40] 2025-10-13 12:02:41,352 | INFO     | left removable region: 30
[2025-10-13 08:03:40] 2025-10-13 12:02:41,352 | INFO     | sum of square deviations: 183761585.0
[2025-10-13 08:03:40] 2025-10-13 12:02:41,352 | INFO     | sum of deviations: 428556689.5
[2025-10-13 08:03:40] 2025-10-13 12:02:41,352 | INFO     | mean x: 1760354014.5
[2025-10-13 08:03:40] 2025-10-13 12:02:41,352 | INFO     | mean y: 2528111.154761905
[2025-10-13 08:03:40] 2025-10-13 12:02:41,353 | INFO     | -- intersect: -4102853809.6757264
[2025-10-13 08:03:40] 2025-10-13 12:02:41,353 | INFO     | intersect: -4102853809.6757264
[2025-10-13 08:03:40] 2025-10-13 12:02:41,353 | INFO     | chi2: 8.662493866001379e-05
[2025-10-13 08:03:40] 2025-10-13 12:02:41,353 | INFO     | -- intersect: -4102853809.6757264
[2025-10-13 08:03:40] 2025-10-13 12:02:41,353 | INFO     | current memory leak: 2.33 B/s (using 84 data points, chi2=0.00)
[2025-10-13 08:03:40] 2025-10-13 12:02:41,354 | INFO     | could have reported an average CPU frequency of 1916 MHz (8 samples)
[2025-10-13 08:03:40] 2025-10-13 12:02:41,354 | INFO     | ..............................
[2025-10-13 08:03:40] 2025-10-13 12:02:41,354 | INFO     | . Timing measurements:
[2025-10-13 08:03:40] 2025-10-13 12:02:41,354 | INFO     | . get job = 0 s
[2025-10-13 08:03:40] 2025-10-13 12:02:41,354 | INFO     | . initial setup = 2 s
[2025-10-13 08:03:40] 2025-10-13 12:02:41,354 | INFO     | . payload setup = 8 s
[2025-10-13 08:03:40] 2025-10-13 12:02:41,354 | INFO     | . stage-in = 0 s
[2025-10-13 08:03:40] 2025-10-13 12:02:41,354 | INFO     | . payload execution = 7294 s
[2025-10-13 08:03:40] 2025-10-13 12:02:41,355 | INFO     | . stage-out = 0 s
[2025-10-13 08:03:40] 2025-10-13 12:02:41,355 | INFO     | . log creation = 0 s
[2025-10-13 08:03:40] 2025-10-13 12:02:41,355 | INFO     | ..............................
[2025-10-13 08:03:40] 2025-10-13 12:02:41,444 | INFO     | 
[2025-10-13 08:03:40] 2025-10-13 12:02:41,444 | INFO     | job summary report
[2025-10-13 08:03:40] 2025-10-13 12:02:41,444 | INFO     | --------------------------------------------------
[2025-10-13 08:03:40] 2025-10-13 12:02:41,444 | INFO     | PanDA job id: 6842790187
[2025-10-13 08:03:40] 2025-10-13 12:02:41,445 | INFO     | task id: 46676269
[2025-10-13 08:03:40] 2025-10-13 12:02:41,445 | INFO     | errors: (none)
[2025-10-13 08:03:40] 2025-10-13 12:02:41,445 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 08:03:40] 2025-10-13 12:02:41,445 | INFO     | pilot state: finished 
[2025-10-13 08:03:40] 2025-10-13 12:02:41,445 | INFO     | transexitcode: 0
[2025-10-13 08:03:40] 2025-10-13 12:02:41,445 | INFO     | exeerrorcode: 0
[2025-10-13 08:03:40] 2025-10-13 12:02:41,445 | INFO     | exeerrordiag: 
[2025-10-13 08:03:40] 2025-10-13 12:02:41,445 | INFO     | exitcode: 0
[2025-10-13 08:03:40] 2025-10-13 12:02:41,445 | INFO     | exitmsg: OK
[2025-10-13 08:03:40] 2025-10-13 12:02:41,446 | INFO     | cpuconsumptiontime: 54358 s
[2025-10-13 08:03:40] 2025-10-13 12:02:41,446 | INFO     | nevents: 400
[2025-10-13 08:03:40] 2025-10-13 12:02:41,446 | INFO     | neventsw: 0
[2025-10-13 08:03:40] 2025-10-13 12:02:41,446 | INFO     | pid: 22752
[2025-10-13 08:03:40] 2025-10-13 12:02:41,446 | INFO     | pgrp: 22752
[2025-10-13 08:03:40] 2025-10-13 12:02:41,446 | INFO     | corecount: 8
[2025-10-13 08:03:40] 2025-10-13 12:02:41,446 | INFO     | event service: False
[2025-10-13 08:03:40] 2025-10-13 12:02:41,446 | INFO     | sizes: {0: 2348529, 1: 2348784, 7: 2349046, 12: 2349074, 7306: 2376384, 7308: 2385382, 7310: 2385566, 7322: 2385784}
[2025-10-13 08:03:40] 2025-10-13 12:02:41,447 | INFO     | --------------------------------------------------
[2025-10-13 08:03:40] 2025-10-13 12:02:41,447 | INFO     | 
[2025-10-13 08:03:40] 2025-10-13 12:02:41,447 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 08:03:40] 2025-10-13 12:02:41,473 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 08:03:40] 2025-10-13 12:02:41,474 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 08:03:40] 2025-10-13 12:02:41,474 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 08:03:40] 2025-10-13 12:02:41,474 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 08:03:40] 2025-10-13 12:02:41,474 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 08:03:40] 2025-10-13 12:02:41,475 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 08:03:40] 2025-10-13 12:02:41,475 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 08:03:40] 2025-10-13 12:02:41,475 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 08:03:40] 2025-10-13 12:02:41,475 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 08:03:40] 2025-10-13 12:02:41,475 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 08:03:40] 2025-10-13 12:02:41,476 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 08:03:40] 2025-10-13 12:02:41,476 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 08:03:40] 2025-10-13 12:02:41,476 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 08:03:40] 2025-10-13 12:02:41,476 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 08:03:40] 2025-10-13 12:02:41,476 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 08:03:40] 2025-10-13 12:02:41,477 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 08:03:40] 2025-10-13 12:02:41,477 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 08:03:40] 2025-10-13 12:02:41,477 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 08:03:40] 2025-10-13 12:02:41,477 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 08:03:40] 2025-10-13 12:02:41,477 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 08:03:40] 2025-10-13 12:02:41,478 | INFO     | job 6842790187 has completed (purged errors)
[2025-10-13 08:03:40] 2025-10-13 12:02:41,478 | INFO     | overall cleanup function is called
[2025-10-13 08:03:40] 2025-10-13 12:02:42,486 | INFO     | --- collectZombieJob: --- 10, [22752]
[2025-10-13 08:03:40] 2025-10-13 12:02:42,486 | INFO     | zombie collector waiting for pid 22752
[2025-10-13 08:03:40] 2025-10-13 12:02:42,487 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 08:03:40] 2025-10-13 12:02:42,487 | INFO     | collected zombie processes
[2025-10-13 08:03:40] 2025-10-13 12:02:42,487 | INFO     | will attempt to kill all subprocesses of pid=22752
[2025-10-13 08:03:40] 2025-10-13 12:02:42,578 | INFO     | process IDs to be killed: [22752] (in reverse order)
[2025-10-13 08:03:40] 2025-10-13 12:02:42,635 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 08:03:40] 2025-10-13 12:02:42,636 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 08:03:40] 2025-10-13 12:02:42,640 | INFO     | did not find any defunct processes belonging to 22752
[2025-10-13 08:03:40] 2025-10-13 12:02:42,644 | INFO     | did not find any defunct processes belonging to 22752
[2025-10-13 08:03:40] 2025-10-13 12:02:42,644 | INFO     | ready for new job
[2025-10-13 08:03:40] 2025-10-13 12:02:42,644 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 08:03:40] 2025-10-13 12:02:42,646 | INFO     | ***************************************
[2025-10-13 08:03:40] 2025-10-13 12:02:42,646 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 08:03:40] 2025-10-13 12:02:42,646 | INFO     | ***************************************
[2025-10-13 08:03:40] 2025-10-13 12:02:42,646 | INFO     | 
[2025-10-13 08:03:40] 2025-10-13 12:02:42,647 | INFO     | architecture information:
[2025-10-13 08:03:40] 2025-10-13 12:02:42,648 | INFO     | executing command: cat /etc/os-release
[2025-10-13 08:03:40] 2025-10-13 12:02:42,667 | INFO     | cat /etc/os-release:
[2025-10-13 08:03:40] NAME="CentOS Linux"
[2025-10-13 08:03:40] VERSION="7 (Core)"
[2025-10-13 08:03:40] ID="centos"
[2025-10-13 08:03:40] ID_LIKE="rhel fedora"
[2025-10-13 08:03:40] VERSION_ID="7"
[2025-10-13 08:03:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 08:03:40] ANSI_COLOR="0;31"
[2025-10-13 08:03:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 08:03:40] HOME_URL="https://www.centos.org/"
[2025-10-13 08:03:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 08:03:40] 
[2025-10-13 08:03:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 08:03:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 08:03:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 08:03:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 08:03:40] 
[2025-10-13 08:03:40] 2025-10-13 12:02:42,667 | INFO     | ***************************************
[2025-10-13 08:03:40] 2025-10-13 12:02:43,171 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 08:03:40] 2025-10-13 12:02:43,191 | INFO     | sufficient remaining disk space (18561892352 B)
[2025-10-13 08:03:40] 2025-10-13 12:02:43,191 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 08:03:40] 2025-10-13 12:02:43,191 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 08:03:40] 2025-10-13 12:02:43,192 | INFO     | update_server=False
[2025-10-13 08:03:40] 2025-10-13 12:02:43,192 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 08:03:40] 2025-10-13 12:02:43,192 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 08:03:40] 2025-10-13 12:02:43,268 | INFO     | all payload control threads have been joined
[2025-10-13 08:03:40] 2025-10-13 12:02:43,371 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 08:03:40] 2025-10-13 12:02:43,371 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 08:03:40] 2025-10-13 12:02:43,371 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 08:03:40] 2025-10-13 12:02:43,372 | INFO     | will abort loop
[2025-10-13 08:03:40] 2025-10-13 12:02:43,642 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 08:03:40] 2025-10-13 12:02:43,999 | INFO     | all data control threads have been joined
[2025-10-13 08:03:40] 2025-10-13 12:02:44,104 | INFO     | all job control threads have been joined
[2025-10-13 08:03:40] 2025-10-13 12:02:44,198 | INFO     | [job] retrieve thread has finished
[2025-10-13 08:03:40] 2025-10-13 12:02:44,198 | INFO     | [job] queue monitor thread has finished
[2025-10-13 08:03:40] 2025-10-13 12:02:44,274 | INFO     | [payload] control thread has finished
[2025-10-13 08:03:40] 2025-10-13 12:02:44,377 | INFO     | [job] job monitor thread has finished
[2025-10-13 08:03:40] 2025-10-13 12:02:44,408 | INFO     | [payload] validate_post thread has finished
[2025-10-13 08:03:40] 2025-10-13 12:02:44,658 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 08:03:40] 2025-10-13 12:02:44,701 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 08:03:40] 2025-10-13 12:02:45,005 | INFO     | [data] control thread has finished
[2025-10-13 08:03:40] 2025-10-13 12:02:45,109 | INFO     | [job] control thread has finished
[2025-10-13 08:03:40] 2025-10-13 12:02:45,166 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 08:03:40] 2025-10-13 12:02:45,218 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 08:03:40] 2025-10-13 12:02:45,626 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 08:03:40] 2025-10-13 12:02:45,634 | INFO     | [job] validate thread has finished
[2025-10-13 08:03:40] 2025-10-13 12:02:45,644 | INFO     | [data] copytool_out thread has finished
[2025-10-13 08:03:40] 2025-10-13 12:02:45,655 | INFO     | [data] copytool_in thread has finished
[2025-10-13 08:03:40] 2025-10-13 12:02:45,741 | INFO     | [payload] failed_post thread has finished
[2025-10-13 08:03:40] 2025-10-13 12:02:49,224 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 08:03:40] 2025-10-13 12:03:12,840 | INFO     | PID=16218 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 08:03:40] 2025-10-13 12:03:12,841 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 08:03:40] 2025-10-13 12:03:12,841 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 08:03:40] 2025-10-13 12:03:12,842 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 08:03:40] 2025-10-13 12:03:34,549 | INFO     | [monitor] cgroup control has ended
[2025-10-13 08:03:40] 2025-10-13 12:03:35,555 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139727320557376)>', '<ExcThread(monitor, started 139726291990272)>']
[2025-10-13 08:03:40] 2025-10-13 12:03:35,941 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 08:03:40] 2025-10-13 12:03:35,941 | INFO     | [monitor] control thread has ended
[2025-10-13 08:03:40] 2025-10-13 12:03:40,580 | INFO     | all workflow threads have been joined
[2025-10-13 08:03:40] 2025-10-13 12:03:40,580 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 08:03:40] 2025-10-13 12:03:40,581 | INFO     | traces error code: 0
[2025-10-13 08:03:40] 2025-10-13 12:03:40,581 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 08:03:40] 2025-10-13 12:03:40,697 [wrapper] ==== pilot stdout END ====
[2025-10-13 08:03:40] 2025-10-13 12:03:40,702 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 08:03:40] 2025-10-13 12:03:40,706 [wrapper] pilotpid: 16218
[2025-10-13 08:03:40] 2025-10-13 12:03:40,711 [wrapper] Pilot exit status: 0
[2025-10-13 08:03:40] 2025-10-13 12:03:40,730 [wrapper] pandaids: 6842790187
[2025-10-13 08:03:40] 2025-10-13 12:03:40,782 [wrapper] cleanup supervisor_pilot 15128 16219
[2025-10-13 08:03:40] 2025-10-13 12:03:40,787 [wrapper] Test setup, not cleaning
[2025-10-13 08:03:40] 2025-10-13 12:03:40,792 [wrapper] apfmon messages muted
[2025-10-13 08:03:40] 2025-10-13 12:03:40,796 [wrapper] ==== wrapper stdout END ====
[2025-10-13 08:03:40] 2025-10-13 12:03:40,801 [wrapper] ==== wrapper stderr END ====
[2025-10-13 08:03:40]  *** Error codes and diagnostics ***
[2025-10-13 08:03:40]     "exeErrorCode": 0,
[2025-10-13 08:03:40]     "exeErrorDiag": "",
[2025-10-13 08:03:40]     "pilotErrorCode": 0,
[2025-10-13 08:03:40]     "pilotErrorDiag": "",
[2025-10-13 08:03:40]  *** Listing of results directory ***
[2025-10-13 08:03:40] total 409112
[2025-10-13 08:03:40] -rw-r--r-- 1 boincer umatlas    557409 Oct 13 05:31 pilot3.tar.gz
[2025-10-13 08:03:40] -rwx------ 1 boincer umatlas     36292 Oct 13 05:59 runpilot2-wrapper.sh
[2025-10-13 08:03:40] -rw-r--r-- 1 boincer umatlas      5112 Oct 13 05:59 queuedata.json
[2025-10-13 08:03:40] -rw-r--r-- 1 boincer umatlas       100 Oct 13 06:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 08:03:40] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 06:00 run_atlas
[2025-10-13 08:03:40] -rw-r--r-- 1 boincer umatlas       105 Oct 13 06:00 job.xml
[2025-10-13 08:03:40] -rw-r--r-- 2 boincer umatlas 218419622 Oct 13 06:00 EVNT.46676267._004694.pool.root.1
[2025-10-13 08:03:40] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 06:00 start_atlas.sh
[2025-10-13 08:03:40] drwxrwx--x 2 boincer umatlas      4096 Oct 13 06:00 shared
[2025-10-13 08:03:40] -rw-r--r-- 2 boincer umatlas    569679 Oct 13 06:00 input.tar.gz
[2025-10-13 08:03:40] -rw-r--r-- 1 boincer umatlas         0 Oct 13 06:00 boinc_lockfile
[2025-10-13 08:03:40] -rw-r--r-- 1 boincer umatlas      2549 Oct 13 06:00 pandaJob.out
[2025-10-13 08:03:40] -rw------- 1 boincer umatlas    972849 Oct 13 06:00 agis_schedconf.cvmfs.json
[2025-10-13 08:03:40] -rw------- 1 boincer umatlas   1560580 Oct 13 06:00 agis_ddmendpoints.agis.ALL.json
[2025-10-13 08:03:40] drwx------ 5 boincer umatlas      4096 Oct 13 06:00 pilot3
[2025-10-13 08:03:40] -rw------- 1 boincer umatlas 193799446 Oct 13 08:01 HITS.46676269._096623.pool.root.1
[2025-10-13 08:03:40] -rw-r--r-- 1 boincer umatlas       530 Oct 13 08:02 boinc_task_state.xml
[2025-10-13 08:03:40] -rw------- 1 boincer umatlas      1051 Oct 13 08:02 memory_monitor_summary.json
[2025-10-13 08:03:40] -rw------- 1 boincer umatlas    366187 Oct 13 08:02 log.46676269._096623.job.log.tgz.1
[2025-10-13 08:03:40] -rw------- 1 boincer umatlas      7845 Oct 13 08:02 heartbeat.json
[2025-10-13 08:03:40] -rw-r--r-- 1 boincer umatlas      5910 Oct 13 08:03 init_data.xml
[2025-10-13 08:03:40] -rw------- 1 boincer umatlas        95 Oct 13 08:03 pilot_heartbeat.json
[2025-10-13 08:03:40] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 08:03 boinc_mmap_file
[2025-10-13 08:03:40] -rw-r--r-- 1 boincer umatlas        27 Oct 13 08:03 wrapper_checkpoint.txt
[2025-10-13 08:03:40] -rw------- 1 boincer umatlas      4932 Oct 13 08:03 pilotlog.txt
[2025-10-13 08:03:40] -rw------- 1 boincer umatlas   1037066 Oct 13 08:03 log.46676269._096623.job.log.1
[2025-10-13 08:03:40] -rw------- 1 boincer umatlas       357 Oct 13 08:03 output.list
[2025-10-13 08:03:40] -rw-r--r-- 1 boincer umatlas       620 Oct 13 08:03 runtime_log
[2025-10-13 08:03:40] -rw------- 1 boincer umatlas   1423360 Oct 13 08:03 result.tar.gz
[2025-10-13 08:03:40] -rw-r--r-- 1 boincer umatlas      8703 Oct 13 08:03 runtime_log.err
[2025-10-13 08:03:40] -rw------- 1 boincer umatlas       659 Oct 13 08:03 5PrLDm5VUS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmKjVMDm8Fxfom.diag
[2025-10-13 08:03:40] -rw-r--r-- 1 boincer umatlas     20900 Oct 13 08:03 stderr.txt
[2025-10-13 08:03:40] HITS file was successfully produced:
[2025-10-13 08:03:40] -rw------- 1 boincer umatlas 193799446 Oct 13 08:01 shared/HITS.pool.root.1
[2025-10-13 08:03:40]  *** Contents of shared directory: ***
[2025-10-13 08:03:40] total 404536
[2025-10-13 08:03:40] -rw-r--r-- 2 boincer umatlas 218419622 Oct 13 06:00 ATLAS.root_0
[2025-10-13 08:03:40] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 06:00 start_atlas.sh
[2025-10-13 08:03:40] -rw-r--r-- 2 boincer umatlas    569679 Oct 13 06:00 input.tar.gz
[2025-10-13 08:03:40] -rw------- 1 boincer umatlas 193799446 Oct 13 08:01 HITS.pool.root.1
[2025-10-13 08:03:40] -rw------- 1 boincer umatlas   1423360 Oct 13 08:03 result.tar.gz
08:03:42 (12545): run_atlas exited; CPU time 54371.795887
08:03:42 (12545): called boinc_finish(0)

</stderr_txt>
]]>

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