Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
07:59:21 (562238): wrapper (7.7.26015): starting
07:59:21 (562238): wrapper: running run_atlas (--nthreads 5)
[2025-10-13 07:59:21] Arguments: --nthreads 5
[2025-10-13 07:59:21] Threads: 5
[2025-10-13 07:59:21] Checking for CVMFS
[2025-10-13 07:59:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 07:59:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 07:59:21] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 07:59:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 07:59:21] 2.11.0.0 282648 120 62460 151660 0 188 2809488 4096000 3447 130560 0 773606 99.997 8042 4792 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-13 07:59:21] CVMFS is ok
[2025-10-13 07:59:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 07:59:21] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-13 07:59:21] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-13 07:59:21] Further information can be found at the LHC@home message board.
[2025-10-13 07:59:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 07:59:21] Checking for apptainer binary...
[2025-10-13 07:59:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 07:59:21] Running /usr/bin/apptainer --version
[2025-10-13 07:59:21] apptainer version 1.4.3
[2025-10-13 07:59:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 07:59:21] x32-linux4
[2025-10-13 07:59:21] apptainer works
[2025-10-13 07:59:21] Set ATHENA_PROC_NUMBER=5
[2025-10-13 07:59:21] Set ATHENA_CORE_NUMBER=5
[2025-10-13 07:59:21] Starting ATLAS job with PandaID=6840852012
[2025-10-13 07:59:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 09:55:45]  *** The last 200 lines of the pilot log: ***
[2025-10-13 09:55:45] 2025-10-13 13:55:04,522 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6840852012/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 09:55:45] 2025-10-13 13:55:04,595 | INFO     | number of running child processes to parent process 573265: 1
[2025-10-13 09:55:45] 2025-10-13 13:55:04,596 | INFO     | maximum number of monitored processes: 6
[2025-10-13 09:55:45] 2025-10-13 13:55:05,888 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 09:55:45] 2025-10-13 13:55:05,890 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3734.092124999999
[2025-10-13 09:55:45] 2025-10-13 13:55:05,893 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6840852012/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 09:55:45] 2025-10-13 13:55:05,893 | INFO     | extracted standard info from prmon json
[2025-10-13 09:55:45] 2025-10-13 13:55:05,893 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 09:55:45] 2025-10-13 13:55:05,893 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 09:55:45] 2025-10-13 13:55:05,893 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 09:55:45] 2025-10-13 13:55:05,893 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 09:55:45] 2025-10-13 13:55:05,894 | INFO     | fitting pss+swap vs Time
[2025-10-13 09:55:45] 2025-10-13 13:55:05,894 | INFO     | sum of square deviations: 459366752.5
[2025-10-13 09:55:45] 2025-10-13 13:55:05,895 | INFO     | sum of deviations: 10711520974.499998
[2025-10-13 09:55:45] 2025-10-13 13:55:05,895 | INFO     | mean x: 1760360232.5
[2025-10-13 09:55:45] 2025-10-13 13:55:05,895 | INFO     | mean y: 2338451.6754385964
[2025-10-13 09:55:45] 2025-10-13 13:55:05,895 | INFO     | -- intersect: -41045768426.93338
[2025-10-13 09:55:45] 2025-10-13 13:55:05,895 | INFO     | intersect: -41045768426.93338
[2025-10-13 09:55:45] 2025-10-13 13:55:05,895 | INFO     | chi2: 1.0802178688441775
[2025-10-13 09:55:45] 2025-10-13 13:55:05,895 | INFO     | sum of square deviations: 401533110.0
[2025-10-13 09:55:45] 2025-10-13 13:55:05,895 | INFO     | sum of deviations: 10074458172.0
[2025-10-13 09:55:45] 2025-10-13 13:55:05,895 | INFO     | mean x: 1760360080.0
[2025-10-13 09:55:45] 2025-10-13 13:55:05,895 | INFO     | mean y: 2336773.137614679
[2025-10-13 09:55:45] 2025-10-13 13:55:05,895 | INFO     | -- intersect: -44165064499.4961
[2025-10-13 09:55:45] 2025-10-13 13:55:05,895 | INFO     | intersect: -44165064499.4961
[2025-10-13 09:55:45] 2025-10-13 13:55:05,896 | INFO     | chi2: 1.0818834337822367
[2025-10-13 09:55:45] 2025-10-13 13:55:05,896 | INFO     | current chi2=1.0818834337822367 (change=-0.15418787136352297 %)
[2025-10-13 09:55:45] 2025-10-13 13:55:05,896 | INFO     | right removable region: 108
[2025-10-13 09:55:45] 2025-10-13 13:55:05,896 | INFO     | sum of square deviations: 401533110.0
[2025-10-13 09:55:45] 2025-10-13 13:55:05,896 | INFO     | sum of deviations: 172014814.99999994
[2025-10-13 09:55:45] 2025-10-13 13:55:05,896 | INFO     | mean x: 1760360385.0
[2025-10-13 09:55:45] 2025-10-13 13:55:05,896 | INFO     | mean y: 2365440.743119266
[2025-10-13 09:55:45] 2025-10-13 13:55:05,896 | INFO     | -- intersect: -751764314.4820567
[2025-10-13 09:55:45] 2025-10-13 13:55:05,896 | INFO     | intersect: -751764314.4820567
[2025-10-13 09:55:45] 2025-10-13 13:55:05,896 | INFO     | chi2: 0.002543136234703857
[2025-10-13 09:55:45] 2025-10-13 13:55:05,896 | INFO     | current chi2=0.002543136234703857 (change=99.76457191571687 %)
[2025-10-13 09:55:45] 2025-10-13 13:55:05,896 | INFO     | sum of square deviations: 348769330.0
[2025-10-13 09:55:45] 2025-10-13 13:55:05,896 | INFO     | sum of deviations: 404957467.00000006
[2025-10-13 09:55:45] 2025-10-13 13:55:05,897 | INFO     | mean x: 1760360537.5
[2025-10-13 09:55:45] 2025-10-13 13:55:05,897 | INFO     | mean y: 2364754.076923077
[2025-10-13 09:55:45] 2025-10-13 13:55:05,897 | INFO     | -- intersect: -2041596921.89028
[2025-10-13 09:55:45] 2025-10-13 13:55:05,897 | INFO     | intersect: -2041596921.89028
[2025-10-13 09:55:45] 2025-10-13 13:55:05,897 | INFO     | chi2: 0.0021775076722503352
[2025-10-13 09:55:45] 2025-10-13 13:55:05,897 | INFO     | current chi2=0.0021775076722503352 (change=14.377073373581913 %)
[2025-10-13 09:55:45] 2025-10-13 13:55:05,897 | INFO     | left removable region: 20
[2025-10-13 09:55:45] 2025-10-13 13:55:05,897 | INFO     | sum of square deviations: 211285822.0
[2025-10-13 09:55:45] 2025-10-13 13:55:05,897 | INFO     | sum of deviations: 694724303.0000002
[2025-10-13 09:55:45] 2025-10-13 13:55:05,897 | INFO     | mean x: 1760360659.5
[2025-10-13 09:55:45] 2025-10-13 13:55:05,897 | INFO     | mean y: 2362444.6363636362
[2025-10-13 09:55:45] 2025-10-13 13:55:05,897 | INFO     | -- intersect: -5785841044.946379
[2025-10-13 09:55:45] 2025-10-13 13:55:05,897 | INFO     | intersect: -5785841044.946379
[2025-10-13 09:55:45] 2025-10-13 13:55:05,897 | INFO     | chi2: 0.00015439806053030137
[2025-10-13 09:55:45] 2025-10-13 13:55:05,897 | INFO     | -- intersect: -5785841044.946379
[2025-10-13 09:55:45] 2025-10-13 13:55:05,897 | INFO     | current memory leak: 3.29 B/s (using 88 data points, chi2=0.00)
[2025-10-13 09:55:45] 2025-10-13 13:55:05,897 | INFO     | could have reported an average CPU frequency of 3819 MHz (7 samples)
[2025-10-13 09:55:45] 2025-10-13 13:55:05,898 | INFO     | ..............................
[2025-10-13 09:55:45] 2025-10-13 13:55:05,898 | INFO     | . Timing measurements:
[2025-10-13 09:55:45] 2025-10-13 13:55:05,898 | INFO     | . get job = 0 s
[2025-10-13 09:55:45] 2025-10-13 13:55:05,898 | INFO     | . initial setup = 1 s
[2025-10-13 09:55:45] 2025-10-13 13:55:05,898 | INFO     | . payload setup = 2 s
[2025-10-13 09:55:45] 2025-10-13 13:55:05,898 | INFO     | . stage-in = 0 s
[2025-10-13 09:55:45] 2025-10-13 13:55:05,898 | INFO     | . payload execution = 6912 s
[2025-10-13 09:55:45] 2025-10-13 13:55:05,898 | INFO     | . stage-out = 0 s
[2025-10-13 09:55:45] 2025-10-13 13:55:05,898 | INFO     | . log creation = 0 s
[2025-10-13 09:55:45] 2025-10-13 13:55:05,898 | INFO     | ..............................
[2025-10-13 09:55:45] 2025-10-13 13:55:05,936 | INFO     | 
[2025-10-13 09:55:45] 2025-10-13 13:55:05,936 | INFO     | job summary report
[2025-10-13 09:55:45] 2025-10-13 13:55:05,936 | INFO     | --------------------------------------------------
[2025-10-13 09:55:45] 2025-10-13 13:55:05,936 | INFO     | PanDA job id: 6840852012
[2025-10-13 09:55:45] 2025-10-13 13:55:05,936 | INFO     | task id: 46676269
[2025-10-13 09:55:45] 2025-10-13 13:55:05,936 | INFO     | errors: (none)
[2025-10-13 09:55:45] 2025-10-13 13:55:05,936 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 09:55:45] 2025-10-13 13:55:05,936 | INFO     | pilot state: finished 
[2025-10-13 09:55:45] 2025-10-13 13:55:05,936 | INFO     | transexitcode: 0
[2025-10-13 09:55:45] 2025-10-13 13:55:05,936 | INFO     | exeerrorcode: 0
[2025-10-13 09:55:45] 2025-10-13 13:55:05,936 | INFO     | exeerrordiag: 
[2025-10-13 09:55:45] 2025-10-13 13:55:05,936 | INFO     | exitcode: 0
[2025-10-13 09:55:45] 2025-10-13 13:55:05,936 | INFO     | exitmsg: OK
[2025-10-13 09:55:45] 2025-10-13 13:55:05,936 | INFO     | cpuconsumptiontime: 27513 s
[2025-10-13 09:55:45] 2025-10-13 13:55:05,936 | INFO     | nevents: 400
[2025-10-13 09:55:45] 2025-10-13 13:55:05,936 | INFO     | neventsw: 0
[2025-10-13 09:55:45] 2025-10-13 13:55:05,936 | INFO     | pid: 573265
[2025-10-13 09:55:45] 2025-10-13 13:55:05,936 | INFO     | pgrp: 573265
[2025-10-13 09:55:45] 2025-10-13 13:55:05,936 | INFO     | corecount: 5
[2025-10-13 09:55:45] 2025-10-13 13:55:05,936 | INFO     | event service: False
[2025-10-13 09:55:45] 2025-10-13 13:55:05,937 | INFO     | sizes: {0: 2348841, 2: 2349103, 10: 2349131, 6919: 2376460, 6921: 2385528, 6926: 2385666}
[2025-10-13 09:55:45] 2025-10-13 13:55:05,937 | INFO     | --------------------------------------------------
[2025-10-13 09:55:45] 2025-10-13 13:55:05,937 | INFO     | 
[2025-10-13 09:55:45] 2025-10-13 13:55:05,937 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2025-10-13 09:55:45] 2025-10-13 13:55:05,948 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 09:55:45] 2025-10-13 13:55:05,948 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 09:55:45] 2025-10-13 13:55:05,948 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 09:55:45] 2025-10-13 13:55:05,948 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 09:55:45] 2025-10-13 13:55:05,948 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 09:55:45] 2025-10-13 13:55:05,948 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 09:55:45] 2025-10-13 13:55:05,948 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 09:55:45] 2025-10-13 13:55:05,948 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 09:55:45] 2025-10-13 13:55:05,948 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 09:55:45] 2025-10-13 13:55:05,948 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 09:55:45] 2025-10-13 13:55:05,948 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 09:55:45] 2025-10-13 13:55:05,948 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 09:55:45] 2025-10-13 13:55:05,948 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 09:55:45] 2025-10-13 13:55:05,948 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 09:55:45] 2025-10-13 13:55:05,948 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 09:55:45] 2025-10-13 13:55:05,948 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 09:55:45] 2025-10-13 13:55:05,948 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 09:55:45] 2025-10-13 13:55:05,948 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 09:55:45] 2025-10-13 13:55:05,948 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 09:55:45] 2025-10-13 13:55:05,948 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 09:55:45] 2025-10-13 13:55:05,949 | INFO     | job 6840852012 has completed (purged errors)
[2025-10-13 09:55:45] 2025-10-13 13:55:05,949 | INFO     | overall cleanup function is called
[2025-10-13 09:55:45] 2025-10-13 13:55:06,955 | INFO     | --- collectZombieJob: --- 10, [573265]
[2025-10-13 09:55:45] 2025-10-13 13:55:06,955 | INFO     | zombie collector waiting for pid 573265
[2025-10-13 09:55:45] 2025-10-13 13:55:06,955 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 09:55:45] 2025-10-13 13:55:06,956 | INFO     | collected zombie processes
[2025-10-13 09:55:45] 2025-10-13 13:55:06,956 | INFO     | will attempt to kill all subprocesses of pid=573265
[2025-10-13 09:55:45] 2025-10-13 13:55:07,038 | INFO     | process IDs to be killed: [573265] (in reverse order)
[2025-10-13 09:55:45] 2025-10-13 13:55:07,072 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 09:55:45] 2025-10-13 13:55:07,072 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 09:55:45] 2025-10-13 13:55:07,074 | INFO     | did not find any defunct processes belonging to 573265
[2025-10-13 09:55:45] 2025-10-13 13:55:07,076 | INFO     | did not find any defunct processes belonging to 573265
[2025-10-13 09:55:45] 2025-10-13 13:55:07,076 | INFO     | ready for new job
[2025-10-13 09:55:45] 2025-10-13 13:55:07,076 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 09:55:45] 2025-10-13 13:55:07,077 | INFO     | ***************************************
[2025-10-13 09:55:45] 2025-10-13 13:55:07,077 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 09:55:45] 2025-10-13 13:55:07,077 | INFO     | ***************************************
[2025-10-13 09:55:45] 2025-10-13 13:55:07,077 | INFO     | 
[2025-10-13 09:55:45] 2025-10-13 13:55:07,078 | INFO     | architecture information:
[2025-10-13 09:55:45] 2025-10-13 13:55:07,078 | INFO     | executing command: cat /etc/os-release
[2025-10-13 09:55:45] 2025-10-13 13:55:07,085 | INFO     | cat /etc/os-release:
[2025-10-13 09:55:45] NAME="CentOS Linux"
[2025-10-13 09:55:45] VERSION="7 (Core)"
[2025-10-13 09:55:45] ID="centos"
[2025-10-13 09:55:45] ID_LIKE="rhel fedora"
[2025-10-13 09:55:45] VERSION_ID="7"
[2025-10-13 09:55:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 09:55:45] ANSI_COLOR="0;31"
[2025-10-13 09:55:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 09:55:45] HOME_URL="https://www.centos.org/"
[2025-10-13 09:55:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 09:55:45] 
[2025-10-13 09:55:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 09:55:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 09:55:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 09:55:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 09:55:45] 
[2025-10-13 09:55:45] 2025-10-13 13:55:07,085 | INFO     | ***************************************
[2025-10-13 09:55:45] 2025-10-13 13:55:07,587 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2025-10-13 09:55:45] 2025-10-13 13:55:07,597 | INFO     | sufficient remaining disk space (151243456512 B)
[2025-10-13 09:55:45] 2025-10-13 13:55:07,597 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 09:55:45] 2025-10-13 13:55:07,597 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 09:55:45] 2025-10-13 13:55:07,597 | INFO     | update_server=False
[2025-10-13 09:55:45] 2025-10-13 13:55:07,597 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 09:55:45] 2025-10-13 13:55:07,597 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 09:55:45] 2025-10-13 13:55:07,597 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 09:55:45] 2025-10-13 13:55:07,638 | INFO     | all data control threads have been joined
[2025-10-13 09:55:45] 2025-10-13 13:55:08,103 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 09:55:45] 2025-10-13 13:55:08,104 | INFO     | aborting loop
[2025-10-13 09:55:45] 2025-10-13 13:55:08,370 | INFO     | all payload control threads have been joined
[2025-10-13 09:55:45] 2025-10-13 13:55:08,557 | INFO     | all job control threads have been joined
[2025-10-13 09:55:45] 2025-10-13 13:55:08,602 | INFO     | [job] retrieve thread has finished
[2025-10-13 09:55:45] 2025-10-13 13:55:08,602 | INFO     | [job] queue monitor thread has finished
[2025-10-13 09:55:45] 2025-10-13 13:55:08,643 | INFO     | [data] control thread has finished
[2025-10-13 09:55:45] 2025-10-13 13:55:08,983 | INFO     | [data] copytool_in thread has finished
[2025-10-13 09:55:45] 2025-10-13 13:55:09,011 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 09:55:45] 2025-10-13 13:55:09,109 | INFO     | [job] job monitor thread has finished
[2025-10-13 09:55:45] 2025-10-13 13:55:09,160 | INFO     | [payload] failed_post thread has finished
[2025-10-13 09:55:45] 2025-10-13 13:55:09,199 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 09:55:45] 2025-10-13 13:55:09,376 | INFO     | [payload] control thread has finished
[2025-10-13 09:55:45] 2025-10-13 13:55:09,496 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 09:55:45] 2025-10-13 13:55:09,561 | INFO     | [job] control thread has finished
[2025-10-13 09:55:45] 2025-10-13 13:55:09,621 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 09:55:45] 2025-10-13 13:55:09,631 | INFO     | [job] validate thread has finished
[2025-10-13 09:55:45] 2025-10-13 13:55:09,820 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 09:55:45] 2025-10-13 13:55:09,848 | INFO     | [payload] validate_post thread has finished
[2025-10-13 09:55:45] 2025-10-13 13:55:11,016 | INFO     | [data] copytool_out thread has finished
[2025-10-13 09:55:45] 2025-10-13 13:55:11,603 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 09:55:45] 2025-10-13 13:55:37,231 | INFO     | PID=566416 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 09:55:45] 2025-10-13 13:55:37,231 | INFO     | .. there are 4 such processes running
[2025-10-13 09:55:45] 2025-10-13 13:55:37,231 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 09:55:45] 2025-10-13 13:55:37,232 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 09:55:45] 2025-10-13 13:55:37,232 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 09:55:45] 2025-10-13 13:55:38,892 | INFO     | [monitor] cgroup control has ended
[2025-10-13 09:55:45] 2025-10-13 13:55:40,622 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 124469990053696)>', '<ExcThread(monitor, started 124468605212416)>']
[2025-10-13 09:55:45] 2025-10-13 13:55:41,247 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 09:55:45] 2025-10-13 13:55:41,247 | INFO     | [monitor] control thread has ended
[2025-10-13 09:55:45] 2025-10-13 13:55:45,637 | INFO     | all workflow threads have been joined
[2025-10-13 09:55:45] 2025-10-13 13:55:45,638 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 09:55:45] 2025-10-13 13:55:45,638 | INFO     | traces error code: 0
[2025-10-13 09:55:45] 2025-10-13 13:55:45,638 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 09:55:45] 2025-10-13 13:55:45,679 [wrapper] ==== pilot stdout END ====
[2025-10-13 09:55:45] 2025-10-13 13:55:45,681 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 09:55:45] 2025-10-13 13:55:45,682 [wrapper] pilotpid: 566416
[2025-10-13 09:55:45] 2025-10-13 13:55:45,683 [wrapper] Pilot exit status: 0
[2025-10-13 09:55:45] 2025-10-13 13:55:45,688 [wrapper] pandaids: 6840852012
[2025-10-13 09:55:45] 2025-10-13 13:55:45,705 [wrapper] cleanup supervisor_pilot  688616 566417
[2025-10-13 09:55:45] 2025-10-13 13:55:45,707 [wrapper] Test setup, not cleaning
[2025-10-13 09:55:45] 2025-10-13 13:55:45,708 [wrapper] apfmon messages muted
[2025-10-13 09:55:45] 2025-10-13 13:55:45,709 [wrapper] ==== wrapper stdout END ====
[2025-10-13 09:55:45] 2025-10-13 13:55:45,711 [wrapper] ==== wrapper stderr END ====
[2025-10-13 09:55:45]  *** Error codes and diagnostics ***
[2025-10-13 09:55:45]     "exeErrorCode": 0,
[2025-10-13 09:55:45]     "exeErrorDiag": "",
[2025-10-13 09:55:45]     "pilotErrorCode": 0,
[2025-10-13 09:55:45]     "pilotErrorDiag": "",
[2025-10-13 09:55:45]  *** Listing of results directory ***
[2025-10-13 09:55:45] total 411184
[2025-10-13 09:55:45] -rw-r--r-- 1 boinc boinc    557409 Oct 12 17:57 pilot3.tar.gz
[2025-10-13 09:55:45] -rw-r--r-- 1 boinc boinc      5112 Oct 12 18:30 queuedata.json
[2025-10-13 09:55:45] -rwx------ 1 boinc boinc     36292 Oct 12 18:31 runpilot2-wrapper.sh
[2025-10-13 09:55:45] -rw-r--r-- 1 boinc boinc       100 Oct 13 07:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 09:55:45] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 07:59 run_atlas
[2025-10-13 09:55:45] -rw-r--r-- 1 boinc boinc       105 Oct 13 07:59 job.xml
[2025-10-13 09:55:45] -rw-r--r-- 2 boinc boinc     15120 Oct 13 07:59 start_atlas.sh
[2025-10-13 09:55:45] drwxrwx--x 2 boinc boinc      4096 Oct 13 07:59 shared
[2025-10-13 09:55:45] -rw-r--r-- 2 boinc boinc    569690 Oct 13 07:59 input.tar.gz
[2025-10-13 09:55:45] -rw-r--r-- 1 boinc boinc      9723 Oct 13 07:59 init_data.xml
[2025-10-13 09:55:45] -rw-r--r-- 2 boinc boinc 219361608 Oct 13 07:59 EVNT.46676267._004619.pool.root.1
[2025-10-13 09:55:45] -rw-r--r-- 1 boinc boinc         0 Oct 13 07:59 boinc_setup_complete
[2025-10-13 09:55:45] -rw-r--r-- 1 boinc boinc         0 Oct 13 07:59 boinc_lockfile
[2025-10-13 09:55:45] -rw-r--r-- 1 boinc boinc      2549 Oct 13 07:59 pandaJob.out
[2025-10-13 09:55:45] -rw------- 1 boinc boinc    972497 Oct 13 07:59 agis_schedconf.cvmfs.json
[2025-10-13 09:55:45] -rw------- 1 boinc boinc   1560580 Oct 13 07:59 agis_ddmendpoints.agis.ALL.json
[2025-10-13 09:55:45] drwx------ 5 boinc boinc      4096 Oct 13 07:59 pilot3
[2025-10-13 09:55:45] -rw-r--r-- 1 boinc boinc       529 Oct 13 09:54 boinc_task_state.xml
[2025-10-13 09:55:45] -rw------- 1 boinc boinc 195132112 Oct 13 09:54 HITS.46676269._091191.pool.root.1
[2025-10-13 09:55:45] -rw------- 1 boinc boinc      1030 Oct 13 09:54 memory_monitor_summary.json
[2025-10-13 09:55:45] -rw------- 1 boinc boinc    315529 Oct 13 09:55 log.46676269._091191.job.log.tgz.1
[2025-10-13 09:55:45] -rw------- 1 boinc boinc      7732 Oct 13 09:55 heartbeat.json
[2025-10-13 09:55:45] -rw------- 1 boinc boinc        95 Oct 13 09:55 pilot_heartbeat.json
[2025-10-13 09:55:45] -rw-r--r-- 1 boinc boinc        27 Oct 13 09:55 wrapper_checkpoint.txt
[2025-10-13 09:55:45] -rw-r--r-- 1 boinc boinc      8192 Oct 13 09:55 boinc_mmap_file
[2025-10-13 09:55:45] -rw------- 1 boinc boinc      4830 Oct 13 09:55 pilotlog.txt
[2025-10-13 09:55:45] -rw------- 1 boinc boinc   1008712 Oct 13 09:55 log.46676269._091191.job.log.1
[2025-10-13 09:55:45] -rw------- 1 boinc boinc       357 Oct 13 09:55 output.list
[2025-10-13 09:55:45] -rw-r--r-- 1 boinc boinc       620 Oct 13 09:55 runtime_log
[2025-10-13 09:55:45] -rw------- 1 boinc boinc   1341440 Oct 13 09:55 result.tar.gz
[2025-10-13 09:55:45] -rw-r--r-- 1 boinc boinc      8764 Oct 13 09:55 runtime_log.err
[2025-10-13 09:55:45] -rw------- 1 boinc boinc       643 Oct 13 09:55 0qAODmmmJS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmdslNDmMppu5m.diag
[2025-10-13 09:55:45] -rw-r--r-- 1 boinc boinc     21187 Oct 13 09:55 stderr.txt
[2025-10-13 09:55:45] HITS file was successfully produced:
[2025-10-13 09:55:45] -rw------- 1 boinc boinc 195132112 Oct 13 09:54 shared/HITS.pool.root.1
[2025-10-13 09:55:45]  *** Contents of shared directory: ***
[2025-10-13 09:55:45] total 406680
[2025-10-13 09:55:45] -rw-r--r-- 2 boinc boinc     15120 Oct 13 07:59 start_atlas.sh
[2025-10-13 09:55:45] -rw-r--r-- 2 boinc boinc    569690 Oct 13 07:59 input.tar.gz
[2025-10-13 09:55:45] -rw-r--r-- 2 boinc boinc 219361608 Oct 13 07:59 ATLAS.root_0
[2025-10-13 09:55:45] -rw------- 1 boinc boinc 195132112 Oct 13 09:54 HITS.pool.root.1
[2025-10-13 09:55:45] -rw------- 1 boinc boinc   1341440 Oct 13 09:55 result.tar.gz
09:55:46 (562238): run_atlas exited; CPU time 27616.502584
09:55:46 (562238): called boinc_finish(0)

</stderr_txt>
]]>

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