Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:11:37 (3679763): wrapper (7.7.26015): starting
07:11:37 (3679763): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 07:11:37] Arguments: --nthreads 8
[2025-10-13 07:11:37] Threads: 8
[2025-10-13 07:11:37] Checking for CVMFS
[2025-10-13 07:11:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 07:11:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 07:11:38] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 07:11:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 07:11:38] 2.13.2.0 169449 126368 522168 151658 0 391 32386767 32935936 35654 16776704 0 260446144 99.591 271963466 20938 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 07:11:38] CVMFS is ok
[2025-10-13 07:11:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 07:11:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 07:11:38] Further information can be found at the LHC@home message board.
[2025-10-13 07:11:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 07:11:38] Checking for apptainer binary...
[2025-10-13 07:11:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 07:11:38] Running /usr/bin/apptainer --version
[2025-10-13 07:11:38] apptainer version 1.4.3-1.el9
[2025-10-13 07:11:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 07:11:38] c6-12-27-4.aglt2.org
[2025-10-13 07:11:38] apptainer works
[2025-10-13 07:11:38] Set ATHENA_PROC_NUMBER=8
[2025-10-13 07:11:38] Set ATHENA_CORE_NUMBER=8
[2025-10-13 07:11:39] Starting ATLAS job with PandaID=6842731835
[2025-10-13 07:11:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 11:25:04]  *** The last 200 lines of the pilot log: ***
[2025-10-13 11:25:04] 2025-10-13 13:45:38,064 | INFO     | time since job start (9216s) is within the limit (172800.0s)
[2025-10-13 11:25:04] 2025-10-13 13:45:38,595 | INFO     | monitor loop #580: job 0:6842731835 is in state 'finished'
[2025-10-13 11:25:04] 2025-10-13 13:45:38,596 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 11:25:04] 2025-10-13 13:45:39,516 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-13 11:25:04] 2025-10-13 13:45:39,536 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2522.590927083334
[2025-10-13 11:25:04] 2025-10-13 13:45:39,558 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6842731835/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 11:25:04] 2025-10-13 13:45:39,559 | INFO     | extracted standard info from prmon json
[2025-10-13 11:25:04] 2025-10-13 13:45:39,560 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 11:25:04] 2025-10-13 13:45:39,560 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 11:25:04] 2025-10-13 13:45:39,561 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 11:25:04] 2025-10-13 13:45:39,561 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 11:25:04] 2025-10-13 13:45:39,564 | INFO     | fitting pss+swap vs Time
[2025-10-13 11:25:04] 2025-10-13 13:45:39,565 | INFO     | sum of square deviations: 1046241334.1933335
[2025-10-13 11:25:04] 2025-10-13 13:45:39,566 | INFO     | sum of deviations: 4105539605.2666674
[2025-10-13 11:25:04] 2025-10-13 13:45:39,566 | INFO     | mean x: 1760358514.0733333
[2025-10-13 11:25:04] 2025-10-13 13:45:39,567 | INFO     | mean y: 2454300.066666667
[2025-10-13 11:25:04] 2025-10-13 13:45:39,567 | INFO     | -- intersect: -6905341600.1677065
[2025-10-13 11:25:04] 2025-10-13 13:45:39,567 | INFO     | intersect: -6905341600.1677065
[2025-10-13 11:25:04] 2025-10-13 13:45:39,567 | INFO     | chi2: 1.4333185598715241
[2025-10-13 11:25:04] 2025-10-13 13:45:39,567 | INFO     | sum of square deviations: 945038581.4896544
[2025-10-13 11:25:04] 2025-10-13 13:45:39,568 | INFO     | sum of deviations: 5178671546.558636
[2025-10-13 11:25:04] 2025-10-13 13:45:39,569 | INFO     | mean x: 1760358361.5724137
[2025-10-13 11:25:04] 2025-10-13 13:45:39,569 | INFO     | mean y: 2455895.0896551725
[2025-10-13 11:25:04] 2025-10-13 13:45:39,569 | INFO     | -- intersect: -9644047366.66256
[2025-10-13 11:25:04] 2025-10-13 13:45:39,569 | INFO     | intersect: -9644047366.66256
[2025-10-13 11:25:04] 2025-10-13 13:45:39,569 | INFO     | chi2: 1.4331898985207325
[2025-10-13 11:25:04] 2025-10-13 13:45:39,569 | INFO     | current chi2=1.4331898985207325 (change=0.008976465832070502 %)
[2025-10-13 11:25:04] 2025-10-13 13:45:39,569 | INFO     | right removable region: 144
[2025-10-13 11:25:04] 2025-10-13 13:45:39,570 | INFO     | sum of square deviations: 945013204.9931026
[2025-10-13 11:25:04] 2025-10-13 13:45:39,571 | INFO     | sum of deviations: -17196190840.289665
[2025-10-13 11:25:04] 2025-10-13 13:45:39,571 | INFO     | mean x: 1760358666.5931034
[2025-10-13 11:25:04] 2025-10-13 13:45:39,571 | INFO     | mean y: 2485902.9103448275
[2025-10-13 11:25:04] 2025-10-13 13:45:39,571 | INFO     | -- intersect: 32035333082.346104
[2025-10-13 11:25:04] 2025-10-13 13:45:39,571 | INFO     | intersect: 32035333082.346104
[2025-10-13 11:25:04] 2025-10-13 13:45:39,572 | INFO     | chi2: 0.03081556948848737
[2025-10-13 11:25:04] 2025-10-13 13:45:39,572 | INFO     | current chi2=0.03081556948848737 (change=97.8500543876827 %)
[2025-10-13 11:25:04] 2025-10-13 13:45:39,572 | INFO     | sum of square deviations: 850564888.9714278
[2025-10-13 11:25:04] 2025-10-13 13:45:39,573 | INFO     | sum of deviations: -16710864225.14286
[2025-10-13 11:25:04] 2025-10-13 13:45:39,573 | INFO     | mean x: 1760358819.0857143
[2025-10-13 11:25:04] 2025-10-13 13:45:39,573 | INFO     | mean y: 2485105.9285714286
[2025-10-13 11:25:04] 2025-10-13 13:45:39,573 | INFO     | -- intersect: 34587873704.37844
[2025-10-13 11:25:04] 2025-10-13 13:45:39,573 | INFO     | intersect: 34587873704.37844
[2025-10-13 11:25:04] 2025-10-13 13:45:39,574 | INFO     | chi2: 0.02776397019373058
[2025-10-13 11:25:04] 2025-10-13 13:45:39,574 | INFO     | current chi2=0.02776397019373058 (change=9.90278403226285 %)
[2025-10-13 11:25:04] 2025-10-13 13:45:39,574 | INFO     | left removable region: 20
[2025-10-13 11:25:04] 2025-10-13 13:45:39,574 | INFO     | sum of square deviations: 590957291.709679
[2025-10-13 11:25:04] 2025-10-13 13:45:39,575 | INFO     | sum of deviations: -13014960081.338707
[2025-10-13 11:25:04] 2025-10-13 13:45:39,575 | INFO     | mean x: 1760358941.048387
[2025-10-13 11:25:04] 2025-10-13 13:45:39,575 | INFO     | mean y: 2484789.056451613
[2025-10-13 11:25:04] 2025-10-13 13:45:39,575 | INFO     | -- intersect: 38771786171.71538
[2025-10-13 11:25:04] 2025-10-13 13:45:39,576 | INFO     | intersect: 38771786171.71538
[2025-10-13 11:25:04] 2025-10-13 13:45:39,576 | INFO     | chi2: 0.024092103452199868
[2025-10-13 11:25:04] 2025-10-13 13:45:39,576 | INFO     | -- intersect: 38771786171.71538
[2025-10-13 11:25:04] 2025-10-13 13:45:39,576 | INFO     | current memory leak: -22.02 B/s (using 124 data points, chi2=0.02)
[2025-10-13 11:25:04] 2025-10-13 13:45:39,577 | INFO     | could have reported an average CPU frequency of 2579 MHz (9 samples)
[2025-10-13 11:25:04] 2025-10-13 13:45:39,577 | INFO     | ..............................
[2025-10-13 11:25:04] 2025-10-13 13:45:39,577 | INFO     | . Timing measurements:
[2025-10-13 11:25:04] 2025-10-13 13:45:39,577 | INFO     | . get job = 0 s
[2025-10-13 11:25:04] 2025-10-13 13:45:39,577 | INFO     | . initial setup = 3 s
[2025-10-13 11:25:04] 2025-10-13 13:45:39,578 | INFO     | . payload setup = 16 s
[2025-10-13 11:25:04] 2025-10-13 13:45:39,578 | INFO     | . stage-in = 0 s
[2025-10-13 11:25:04] 2025-10-13 13:45:39,578 | INFO     | . payload execution = 9153 s
[2025-10-13 11:25:04] 2025-10-13 13:45:39,578 | INFO     | . stage-out = 4 s
[2025-10-13 11:25:04] 2025-10-13 13:45:39,578 | INFO     | . log creation = 1 s
[2025-10-13 11:25:04] 2025-10-13 13:45:39,578 | INFO     | ..............................
[2025-10-13 11:25:04] 2025-10-13 13:45:39,681 | INFO     | 
[2025-10-13 11:25:04] 2025-10-13 13:45:39,681 | INFO     | job summary report
[2025-10-13 11:25:04] 2025-10-13 13:45:39,681 | INFO     | --------------------------------------------------
[2025-10-13 11:25:04] 2025-10-13 13:45:39,681 | INFO     | PanDA job id: 6842731835
[2025-10-13 11:25:04] 2025-10-13 13:45:39,681 | INFO     | task id: 46676269
[2025-10-13 11:25:04] 2025-10-13 13:45:39,681 | INFO     | errors: (none)
[2025-10-13 11:25:04] 2025-10-13 13:45:39,681 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 11:25:04] 2025-10-13 13:45:39,681 | INFO     | pilot state: finished 
[2025-10-13 11:25:04] 2025-10-13 13:45:39,682 | INFO     | transexitcode: 0
[2025-10-13 11:25:04] 2025-10-13 13:45:39,682 | INFO     | exeerrorcode: 0
[2025-10-13 11:25:04] 2025-10-13 13:45:39,682 | INFO     | exeerrordiag: 
[2025-10-13 11:25:04] 2025-10-13 13:45:39,682 | INFO     | exitcode: 0
[2025-10-13 11:25:04] 2025-10-13 13:45:39,682 | INFO     | exitmsg: OK
[2025-10-13 11:25:04] 2025-10-13 13:45:39,682 | INFO     | cpuconsumptiontime: 48751 s
[2025-10-13 11:25:04] 2025-10-13 13:45:39,682 | INFO     | nevents: 400
[2025-10-13 11:25:04] 2025-10-13 13:45:39,682 | INFO     | neventsw: 0
[2025-10-13 11:25:04] 2025-10-13 13:45:39,682 | INFO     | pid: 3693859
[2025-10-13 11:25:04] 2025-10-13 13:45:39,682 | INFO     | pgrp: 3693859
[2025-10-13 11:25:04] 2025-10-13 13:45:39,682 | INFO     | corecount: 8
[2025-10-13 11:25:04] 2025-10-13 13:45:39,682 | INFO     | event service: False
[2025-10-13 11:25:04] 2025-10-13 13:45:39,682 | INFO     | sizes: {0: 2347978, 1: 2348834, 2: 2348834, 12: 2349152, 9174: 2377498, 9179: 2386680, 9196: 2386882}
[2025-10-13 11:25:04] 2025-10-13 13:45:39,682 | INFO     | --------------------------------------------------
[2025-10-13 11:25:04] 2025-10-13 13:45:39,682 | INFO     | 
[2025-10-13 11:25:04] 2025-10-13 13:45:39,683 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-13 11:25:04] 2025-10-13 13:45:39,707 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 11:25:04] 2025-10-13 13:45:39,708 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 11:25:04] 2025-10-13 13:45:39,708 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 11:25:04] 2025-10-13 13:45:39,708 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 11:25:04] 2025-10-13 13:45:39,708 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 11:25:04] 2025-10-13 13:45:39,708 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 11:25:04] 2025-10-13 13:45:39,708 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 11:25:04] 2025-10-13 13:45:39,708 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 11:25:04] 2025-10-13 13:45:39,708 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 11:25:04] 2025-10-13 13:45:39,708 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 11:25:04] 2025-10-13 13:45:39,708 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 11:25:04] 2025-10-13 13:45:39,708 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 11:25:04] 2025-10-13 13:45:39,709 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 11:25:04] 2025-10-13 13:45:39,709 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 11:25:04] 2025-10-13 13:45:39,709 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 11:25:04] 2025-10-13 13:45:39,709 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 11:25:04] 2025-10-13 13:45:39,709 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 11:25:04] 2025-10-13 13:45:39,709 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 11:25:04] 2025-10-13 13:45:39,709 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 11:25:04] 2025-10-13 13:45:39,709 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 11:25:04] 2025-10-13 13:45:39,709 | INFO     | job 6842731835 has completed (purged errors)
[2025-10-13 11:25:04] 2025-10-13 13:45:39,709 | INFO     | overall cleanup function is called
[2025-10-13 11:25:04] 2025-10-13 13:45:40,718 | INFO     | --- collectZombieJob: --- 10, [3693859]
[2025-10-13 11:25:04] 2025-10-13 13:45:40,718 | INFO     | zombie collector waiting for pid 3693859
[2025-10-13 11:25:04] 2025-10-13 13:45:40,719 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 11:25:04] 2025-10-13 13:45:40,719 | INFO     | collected zombie processes
[2025-10-13 11:25:04] 2025-10-13 13:45:40,719 | INFO     | will attempt to kill all subprocesses of pid=3693859
[2025-10-13 11:25:04] 2025-10-13 13:45:41,296 | INFO     | process IDs to be killed: [3693859] (in reverse order)
[2025-10-13 11:25:04] 2025-10-13 13:45:41,499 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 11:25:04] 2025-10-13 13:45:41,499 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 11:25:04] 2025-10-13 13:45:41,518 | INFO     | did not find any defunct processes belonging to 3693859
[2025-10-13 11:25:04] 2025-10-13 13:45:41,549 | INFO     | did not find any defunct processes belonging to 3693859
[2025-10-13 11:25:04] 2025-10-13 13:45:41,549 | INFO     | ready for new job
[2025-10-13 11:25:04] 2025-10-13 13:45:41,549 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 11:25:04] 2025-10-13 13:45:41,551 | INFO     | ***************************************
[2025-10-13 11:25:04] 2025-10-13 13:45:41,552 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 11:25:04] 2025-10-13 13:45:41,552 | INFO     | ***************************************
[2025-10-13 11:25:04] 2025-10-13 13:45:41,552 | INFO     | 
[2025-10-13 11:25:04] 2025-10-13 13:45:41,573 | INFO     | architecture information:
[2025-10-13 11:25:04] 2025-10-13 13:45:41,575 | INFO     | executing command: cat /etc/os-release
[2025-10-13 11:25:04] 2025-10-13 13:45:41,717 | INFO     | cat /etc/os-release:
[2025-10-13 11:25:04] NAME="CentOS Linux"
[2025-10-13 11:25:04] VERSION="7 (Core)"
[2025-10-13 11:25:04] ID="centos"
[2025-10-13 11:25:04] ID_LIKE="rhel fedora"
[2025-10-13 11:25:04] VERSION_ID="7"
[2025-10-13 11:25:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 11:25:04] ANSI_COLOR="0;31"
[2025-10-13 11:25:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 11:25:04] HOME_URL="https://www.centos.org/"
[2025-10-13 11:25:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 11:25:04] 
[2025-10-13 11:25:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 11:25:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 11:25:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 11:25:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 11:25:04] 
[2025-10-13 11:25:04] 2025-10-13 13:45:41,717 | INFO     | ***************************************
[2025-10-13 11:25:04] 2025-10-13 13:45:42,221 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-13 11:25:04] 2025-10-13 13:45:42,245 | INFO     | sufficient remaining disk space (94325702656 B)
[2025-10-13 11:25:04] 2025-10-13 13:45:42,245 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 11:25:04] 2025-10-13 13:45:42,245 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 11:25:04] 2025-10-13 13:45:42,245 | INFO     | update_server=False
[2025-10-13 11:25:04] 2025-10-13 13:45:42,246 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 11:25:04] 2025-10-13 13:45:42,246 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 11:25:04] 2025-10-13 13:45:42,247 | INFO     | aborting loop
[2025-10-13 11:25:04] 2025-10-13 13:45:42,280 | INFO     | all payload control threads have been joined
[2025-10-13 11:25:04] 2025-10-13 13:45:42,319 | INFO     | all job control threads have been joined
[2025-10-13 11:25:04] 2025-10-13 13:45:42,545 | INFO     | all data control threads have been joined
[2025-10-13 11:25:04] 2025-10-13 13:45:42,657 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 11:25:04] 2025-10-13 13:45:43,224 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 11:25:04] 2025-10-13 13:45:43,253 | INFO     | [job] job monitor thread has finished
[2025-10-13 11:25:04] 2025-10-13 13:45:43,255 | INFO     | [job] retrieve thread has finished
[2025-10-13 11:25:04] 2025-10-13 13:45:43,287 | INFO     | [payload] control thread has finished
[2025-10-13 11:25:04] 2025-10-13 13:45:43,326 | INFO     | [job] control thread has finished
[2025-10-13 11:25:04] 2025-10-13 13:45:43,552 | INFO     | [data] control thread has finished
[2025-10-13 11:25:04] 2025-10-13 13:45:43,621 | INFO     | [job] validate thread has finished
[2025-10-13 11:25:04] 2025-10-13 13:45:43,681 | INFO     | [payload] validate_post thread has finished
[2025-10-13 11:25:04] 2025-10-13 13:45:44,508 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 11:25:04] 2025-10-13 13:45:44,556 | INFO     | [data] copytool_in thread has finished
[2025-10-13 11:25:04] 2025-10-13 13:45:44,561 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 11:25:04] 2025-10-13 13:45:44,562 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 11:25:04] 2025-10-13 13:45:44,692 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 11:25:04] 2025-10-13 13:45:44,702 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 11:25:04] 2025-10-13 13:45:44,765 | INFO     | [payload] failed_post thread has finished
[2025-10-13 11:25:04] 2025-10-13 13:45:45,231 | INFO     | [data] copytool_out thread has finished
[2025-10-13 11:25:04] 2025-10-13 13:45:45,708 | INFO     | [job] queue monitor thread has finished
[2025-10-13 11:25:04] 2025-10-13 13:45:46,673 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 11:25:04] 2025-10-13 13:46:11,824 | INFO     | PID=3683919 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 11:25:04] 2025-10-13 13:46:11,825 | INFO     | .. there are 31 such processes running
[2025-10-13 11:25:04] 2025-10-13 13:46:11,826 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 11:25:04] 2025-10-13 13:46:11,826 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 11:25:04] 2025-10-13 13:46:11,826 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 11:25:04] 2025-10-13 13:46:18,062 | INFO     | [monitor] cgroup control has ended
[2025-10-13 11:25:04] 2025-10-13 13:46:20,097 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140460654200640)>', '<ExcThread(monitor, started 140460144170752)>']
[2025-10-13 11:25:04] 2025-10-13 13:46:20,879 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 11:25:04] 2025-10-13 13:46:20,880 | INFO     | [monitor] control thread has ended
[2025-10-13 11:25:04] 2025-10-13 13:46:25,123 | INFO     | all workflow threads have been joined
[2025-10-13 11:25:04] 2025-10-13 13:46:25,124 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 11:25:04] 2025-10-13 13:46:25,124 | INFO     | traces error code: 0
[2025-10-13 11:25:04] 2025-10-13 13:46:25,124 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 11:25:04] 2025-10-13 13:46:25,438 [wrapper] ==== pilot stdout END ====
[2025-10-13 11:25:04] 2025-10-13 13:46:25,441 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 11:25:04] 2025-10-13 13:46:25,444 [wrapper] pilotpid: 3683919
[2025-10-13 11:25:04] 2025-10-13 13:46:25,447 [wrapper] Pilot exit status: 0
[2025-10-13 11:25:04] 2025-10-13 13:46:25,500 [wrapper] pandaids: 6842731835
[2025-10-13 11:25:04] 2025-10-13 13:46:25,646 [wrapper] cleanup supervisor_pilot 4071995 3683920
[2025-10-13 11:25:04] 2025-10-13 13:46:25,657 [wrapper] Test setup, not cleaning
[2025-10-13 11:25:04] 2025-10-13 13:46:25,666 [wrapper] apfmon messages muted
[2025-10-13 11:25:04] 2025-10-13 13:46:25,690 [wrapper] ==== wrapper stdout END ====
[2025-10-13 11:25:04] 2025-10-13 13:46:25,746 [wrapper] ==== wrapper stderr END ====
[2025-10-13 11:25:04]  *** Error codes and diagnostics ***
[2025-10-13 11:25:04]     "exeErrorCode": 0,
[2025-10-13 11:25:04]     "exeErrorDiag": "",
[2025-10-13 11:25:04]     "pilotErrorCode": 0,
[2025-10-13 11:25:04]     "pilotErrorDiag": "",
[2025-10-13 11:25:04]  *** Listing of results directory ***
[2025-10-13 11:25:04] total 416064
[2025-10-13 11:25:04] -rw-r--r--. 1 boincer umatlas    557409 Oct 13 04:22 pilot3.tar.gz
[2025-10-13 11:25:04] -rwx------. 1 boincer umatlas     36292 Oct 13 04:35 runpilot2-wrapper.sh
[2025-10-13 11:25:04] -rw-r--r--. 1 boincer umatlas      5112 Oct 13 04:35 queuedata.json
[2025-10-13 11:25:04] -rw-r--r--. 1 boincer umatlas       100 Oct 13 07:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 11:25:04] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 07:11 run_atlas
[2025-10-13 11:25:04] -rw-r--r--. 1 boincer umatlas       105 Oct 13 07:11 job.xml
[2025-10-13 11:25:04] -rw-r--r--. 2 boincer umatlas 222636997 Oct 13 07:11 EVNT.46676267._003178.pool.root.1
[2025-10-13 11:25:04] -rw-r--r--. 2 boincer umatlas    569684 Oct 13 07:11 input.tar.gz
[2025-10-13 11:25:04] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 07:11 start_atlas.sh
[2025-10-13 11:25:04] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 07:11 shared
[2025-10-13 11:25:04] -rw-r--r--. 1 boincer umatlas         0 Oct 13 07:11 boinc_lockfile
[2025-10-13 11:25:04] -rw-r--r--. 1 boincer umatlas      2549 Oct 13 07:11 pandaJob.out
[2025-10-13 11:25:04] -rw-------. 1 boincer umatlas    972497 Oct 13 07:11 agis_schedconf.cvmfs.json
[2025-10-13 11:25:04] -rw-------. 1 boincer umatlas   1560580 Oct 13 07:12 agis_ddmendpoints.agis.ALL.json
[2025-10-13 11:25:04] drwx------. 5 boincer umatlas      4096 Oct 13 07:12 pilot3
[2025-10-13 11:25:04] -rw-------. 1 boincer umatlas 196346348 Oct 13 09:44 HITS.46676269._096511.pool.root.1
[2025-10-13 11:25:04] -rw-r--r--. 1 boincer umatlas       530 Oct 13 09:44 boinc_task_state.xml
[2025-10-13 11:25:04] -rw-------. 1 boincer umatlas      1043 Oct 13 09:45 memory_monitor_summary.json
[2025-10-13 11:25:04] -rw-------. 1 boincer umatlas    391867 Oct 13 09:45 log.46676269._096511.job.log.tgz.1
[2025-10-13 11:25:04] -rw-------. 1 boincer umatlas      7829 Oct 13 09:45 heartbeat.json
[2025-10-13 11:25:04] -rw-------. 1 boincer umatlas        95 Oct 13 09:46 pilot_heartbeat.json
[2025-10-13 11:25:04] -rw-------. 1 boincer umatlas      4824 Oct 13 09:46 pilotlog.txt
[2025-10-13 11:25:04] -rw-------. 1 boincer umatlas   1199816 Oct 13 09:46 log.46676269._096511.job.log.1
[2025-10-13 11:25:04] -rw-------. 1 boincer umatlas       357 Oct 13 09:46 output.list
[2025-10-13 11:25:04] -rw-r--r--. 1 boincer umatlas       620 Oct 13 09:46 runtime_log
[2025-10-13 11:25:04] -rw-------. 1 boincer umatlas   1607680 Oct 13 09:46 result.tar.gz
[2025-10-13 11:25:04] -rw-r--r--. 1 boincer umatlas      8713 Oct 13 09:46 runtime_log.err
[2025-10-13 11:25:04] -rw-------. 1 boincer umatlas       655 Oct 13 09:46 pDbLDmOCTS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmgjmNDme1UEum.diag
[2025-10-13 11:25:04] -rw-r--r--. 1 boincer umatlas      6860 Oct 13 11:21 init_data.xml
[2025-10-13 11:25:04] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 11:25 boinc_mmap_file
[2025-10-13 11:25:04] -rw-r--r--. 1 boincer umatlas        27 Oct 13 11:25 wrapper_checkpoint.txt
[2025-10-13 11:25:04] -rw-r--r--. 1 boincer umatlas      4151 Oct 13 11:25 stderr.txt
[2025-10-13 11:25:04] HITS file was successfully produced:
[2025-10-13 11:25:04] -rw-------. 1 boincer umatlas 196346348 Oct 13 09:44 shared/HITS.pool.root.1
[2025-10-13 11:25:04]  *** Contents of shared directory: ***
[2025-10-13 11:25:04] total 411324
[2025-10-13 11:25:04] -rw-r--r--. 2 boincer umatlas 222636997 Oct 13 07:11 ATLAS.root_0
[2025-10-13 11:25:04] -rw-r--r--. 2 boincer umatlas    569684 Oct 13 07:11 input.tar.gz
[2025-10-13 11:25:04] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 07:11 start_atlas.sh
[2025-10-13 11:25:04] -rw-------. 1 boincer umatlas 196346348 Oct 13 09:44 HITS.pool.root.1
[2025-10-13 11:25:04] -rw-------. 1 boincer umatlas   1607680 Oct 13 09:46 result.tar.gz
11:25:26 (3679763): run_atlas exited; CPU time 49137.149379
11:25:26 (3679763): called boinc_finish(0)

</stderr_txt>
]]>

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