Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
07:57:38 (516224): wrapper (7.7.26015): starting
07:57:38 (516224): wrapper: running run_atlas (--nthreads 5)
[2025-10-13 07:57:38] Arguments: --nthreads 5
[2025-10-13 07:57:38] Threads: 5
[2025-10-13 07:57:38] Checking for CVMFS
[2025-10-13 07:57:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 07:57:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 07:57:38] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 07:57:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 07:57:38] 2.11.0.0 282648 118 54136 151660 1 188 2809488 4096000 6410 130560 0 648964 99.997 8042 4792 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-13 07:57:38] CVMFS is ok
[2025-10-13 07:57:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 07:57:38] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-13 07:57:38] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-13 07:57:38] Further information can be found at the LHC@home message board.
[2025-10-13 07:57:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 07:57:38] Checking for apptainer binary...
[2025-10-13 07:57:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 07:57:38] Running /usr/bin/apptainer --version
[2025-10-13 07:57:38] apptainer version 1.4.3
[2025-10-13 07:57:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 07:57:38] x32-linux4
[2025-10-13 07:57:38] apptainer works
[2025-10-13 07:57:38] Set ATHENA_PROC_NUMBER=5
[2025-10-13 07:57:38] Set ATHENA_CORE_NUMBER=5
[2025-10-13 07:57:38] Starting ATLAS job with PandaID=6842316708
[2025-10-13 07:57:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 09:54:04]  *** The last 200 lines of the pilot log: ***
[2025-10-13 09:54:04] 2025-10-13 13:53:38,611 | INFO     | 6954s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-13 09:54:04] 2025-10-13 13:53:39,776 | INFO     | PID=520108 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 09:54:04] 2025-10-13 13:53:39,776 | INFO     | .. there are 6 such processes running
[2025-10-13 09:54:04] 2025-10-13 13:53:40,377 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 09:54:04] 2025-10-13 13:53:40,381 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3892.7501249999996
[2025-10-13 09:54:04] 2025-10-13 13:53:40,385 | INFO     | using path: /var/lib/boinc-client/slots/3/PanDA_Pilot-6842316708/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 09:54:04] 2025-10-13 13:53:40,386 | INFO     | extracted standard info from prmon json
[2025-10-13 09:54:04] 2025-10-13 13:53:40,386 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 09:54:04] 2025-10-13 13:53:40,386 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 09:54:04] 2025-10-13 13:53:40,386 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 09:54:04] 2025-10-13 13:53:40,386 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 09:54:04] 2025-10-13 13:53:40,388 | INFO     | fitting pss+swap vs Time
[2025-10-13 09:54:04] 2025-10-13 13:53:40,388 | INFO     | sum of square deviations: 459366752.5
[2025-10-13 09:54:04] 2025-10-13 13:53:40,388 | INFO     | sum of deviations: 9433819671.500002
[2025-10-13 09:54:04] 2025-10-13 13:53:40,388 | INFO     | mean x: 1760360132.5
[2025-10-13 09:54:04] 2025-10-13 13:53:40,388 | INFO     | mean y: 2334128.535087719
[2025-10-13 09:54:04] 2025-10-13 13:53:40,388 | INFO     | -- intersect: -36149433400.40215
[2025-10-13 09:54:04] 2025-10-13 13:53:40,389 | INFO     | intersect: -36149433400.40215
[2025-10-13 09:54:04] 2025-10-13 13:53:40,389 | INFO     | chi2: 1.0667077064342945
[2025-10-13 09:54:04] 2025-10-13 13:53:40,389 | INFO     | sum of square deviations: 401533110.0
[2025-10-13 09:54:04] 2025-10-13 13:53:40,389 | INFO     | sum of deviations: 8918371959.0
[2025-10-13 09:54:04] 2025-10-13 13:53:40,389 | INFO     | mean x: 1760359980.0
[2025-10-13 09:54:04] 2025-10-13 13:53:40,389 | INFO     | mean y: 2332768.4954128442
[2025-10-13 09:54:04] 2025-10-13 13:53:40,389 | INFO     | -- intersect: -39096672250.98555
[2025-10-13 09:54:04] 2025-10-13 13:53:40,389 | INFO     | intersect: -39096672250.98555
[2025-10-13 09:54:04] 2025-10-13 13:53:40,390 | INFO     | chi2: 1.0683724055923955
[2025-10-13 09:54:04] 2025-10-13 13:53:40,390 | INFO     | current chi2=1.0683724055923955 (change=-0.1560595417151061 %)
[2025-10-13 09:54:04] 2025-10-13 13:53:40,390 | INFO     | right removable region: 108
[2025-10-13 09:54:04] 2025-10-13 13:53:40,390 | INFO     | sum of square deviations: 401533110.0
[2025-10-13 09:54:04] 2025-10-13 13:53:40,390 | INFO     | sum of deviations: -395275729.99999964
[2025-10-13 09:54:04] 2025-10-13 13:53:40,390 | INFO     | mean x: 1760360285.0
[2025-10-13 09:54:04] 2025-10-13 13:53:40,391 | INFO     | mean y: 2359241.3027522936
[2025-10-13 09:54:04] 2025-10-13 13:53:40,391 | INFO     | -- intersect: 1735286562.5799003
[2025-10-13 09:54:04] 2025-10-13 13:53:40,391 | INFO     | intersect: 1735286562.5799003
[2025-10-13 09:54:04] 2025-10-13 13:53:40,391 | INFO     | chi2: 0.003047951993685782
[2025-10-13 09:54:04] 2025-10-13 13:53:40,391 | INFO     | current chi2=0.003047951993685782 (change=99.71426549416483 %)
[2025-10-13 09:54:04] 2025-10-13 13:53:40,391 | INFO     | sum of square deviations: 348769330.0
[2025-10-13 09:54:04] 2025-10-13 13:53:40,391 | INFO     | sum of deviations: -16686275.5
[2025-10-13 09:54:04] 2025-10-13 13:53:40,391 | INFO     | mean x: 1760360437.5
[2025-10-13 09:54:04] 2025-10-13 13:53:40,392 | INFO     | mean y: 2358142.375
[2025-10-13 09:54:04] 2025-10-13 13:53:40,392 | INFO     | -- intersect: 86579593.95569241
[2025-10-13 09:54:04] 2025-10-13 13:53:40,392 | INFO     | intersect: 86579593.95569241
[2025-10-13 09:54:04] 2025-10-13 13:53:40,392 | INFO     | chi2: 0.002622385870167434
[2025-10-13 09:54:04] 2025-10-13 13:53:40,392 | INFO     | current chi2=0.002622385870167434 (change=13.962363068708497 %)
[2025-10-13 09:54:04] 2025-10-13 13:53:40,392 | INFO     | left removable region: 20
[2025-10-13 09:54:04] 2025-10-13 13:53:40,392 | INFO     | sum of square deviations: 211285822.0
[2025-10-13 09:54:04] 2025-10-13 13:53:40,392 | INFO     | sum of deviations: 676517724.5
[2025-10-13 09:54:04] 2025-10-13 13:53:40,392 | INFO     | mean x: 1760360559.5
[2025-10-13 09:54:04] 2025-10-13 13:53:40,393 | INFO     | mean y: 2354844.784090909
[2025-10-13 09:54:04] 2025-10-13 13:53:40,393 | INFO     | -- intersect: -5634157386.559509
[2025-10-13 09:54:04] 2025-10-13 13:53:40,393 | INFO     | intersect: -5634157386.559509
[2025-10-13 09:54:04] 2025-10-13 13:53:40,393 | INFO     | chi2: 5.752417072155053e-05
[2025-10-13 09:54:04] 2025-10-13 13:53:40,393 | INFO     | -- intersect: -5634157386.559509
[2025-10-13 09:54:04] 2025-10-13 13:53:40,393 | INFO     | current memory leak: 3.20 B/s (using 88 data points, chi2=0.00)
[2025-10-13 09:54:04] 2025-10-13 13:53:40,393 | INFO     | could have reported an average CPU frequency of 3820 MHz (7 samples)
[2025-10-13 09:54:04] 2025-10-13 13:53:40,393 | INFO     | ..............................
[2025-10-13 09:54:04] 2025-10-13 13:53:40,393 | INFO     | . Timing measurements:
[2025-10-13 09:54:04] 2025-10-13 13:53:40,393 | INFO     | . get job = 0 s
[2025-10-13 09:54:04] 2025-10-13 13:53:40,393 | INFO     | . initial setup = 2 s
[2025-10-13 09:54:04] 2025-10-13 13:53:40,393 | INFO     | . payload setup = 3 s
[2025-10-13 09:54:04] 2025-10-13 13:53:40,394 | INFO     | . stage-in = 0 s
[2025-10-13 09:54:04] 2025-10-13 13:53:40,394 | INFO     | . payload execution = 6923 s
[2025-10-13 09:54:04] 2025-10-13 13:53:40,394 | INFO     | . stage-out = 0 s
[2025-10-13 09:54:04] 2025-10-13 13:53:40,394 | INFO     | . log creation = 0 s
[2025-10-13 09:54:04] 2025-10-13 13:53:40,394 | INFO     | ..............................
[2025-10-13 09:54:04] 2025-10-13 13:53:40,776 | INFO     | time since job start (6954s) is within the limit (172800.0s)
[2025-10-13 09:54:04] 2025-10-13 13:53:40,883 | INFO     | 
[2025-10-13 09:54:04] 2025-10-13 13:53:40,883 | INFO     | job summary report
[2025-10-13 09:54:04] 2025-10-13 13:53:40,883 | INFO     | --------------------------------------------------
[2025-10-13 09:54:04] 2025-10-13 13:53:40,883 | INFO     | PanDA job id: 6842316708
[2025-10-13 09:54:04] 2025-10-13 13:53:40,883 | INFO     | task id: 46676269
[2025-10-13 09:54:04] 2025-10-13 13:53:40,883 | INFO     | errors: (none)
[2025-10-13 09:54:04] 2025-10-13 13:53:40,883 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 09:54:04] 2025-10-13 13:53:40,883 | INFO     | pilot state: finished 
[2025-10-13 09:54:04] 2025-10-13 13:53:40,883 | INFO     | transexitcode: 0
[2025-10-13 09:54:04] 2025-10-13 13:53:40,883 | INFO     | exeerrorcode: 0
[2025-10-13 09:54:04] 2025-10-13 13:53:40,883 | INFO     | exeerrordiag: 
[2025-10-13 09:54:04] 2025-10-13 13:53:40,883 | INFO     | exitcode: 0
[2025-10-13 09:54:04] 2025-10-13 13:53:40,884 | INFO     | exitmsg: OK
[2025-10-13 09:54:04] 2025-10-13 13:53:40,884 | INFO     | cpuconsumptiontime: 27801 s
[2025-10-13 09:54:04] 2025-10-13 13:53:40,884 | INFO     | nevents: 400
[2025-10-13 09:54:04] 2025-10-13 13:53:40,884 | INFO     | neventsw: 0
[2025-10-13 09:54:04] 2025-10-13 13:53:40,884 | INFO     | pid: 526827
[2025-10-13 09:54:04] 2025-10-13 13:53:40,884 | INFO     | pgrp: 526827
[2025-10-13 09:54:04] 2025-10-13 13:53:40,884 | INFO     | corecount: 5
[2025-10-13 09:54:04] 2025-10-13 13:53:40,884 | INFO     | event service: False
[2025-10-13 09:54:04] 2025-10-13 13:53:40,884 | INFO     | sizes: {0: 2348665, 1: 2348920, 4: 2349182, 11: 2349210, 6930: 2376512, 6931: 2376511, 6932: 2385763, 6940: 2385901}
[2025-10-13 09:54:04] 2025-10-13 13:53:40,884 | INFO     | --------------------------------------------------
[2025-10-13 09:54:04] 2025-10-13 13:53:40,884 | INFO     | 
[2025-10-13 09:54:04] 2025-10-13 13:53:40,884 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/3
[2025-10-13 09:54:04] 2025-10-13 13:53:40,900 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 09:54:04] 2025-10-13 13:53:40,900 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 09:54:04] 2025-10-13 13:53:40,900 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 09:54:04] 2025-10-13 13:53:40,900 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 09:54:04] 2025-10-13 13:53:40,900 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 09:54:04] 2025-10-13 13:53:40,900 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 09:54:04] 2025-10-13 13:53:40,900 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 09:54:04] 2025-10-13 13:53:40,900 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 09:54:04] 2025-10-13 13:53:40,900 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 09:54:04] 2025-10-13 13:53:40,901 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 09:54:04] 2025-10-13 13:53:40,901 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 09:54:04] 2025-10-13 13:53:40,901 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 09:54:04] 2025-10-13 13:53:40,901 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 09:54:04] 2025-10-13 13:53:40,901 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 09:54:04] 2025-10-13 13:53:40,901 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 09:54:04] 2025-10-13 13:53:40,901 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 09:54:04] 2025-10-13 13:53:40,901 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 09:54:04] 2025-10-13 13:53:40,901 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 09:54:04] 2025-10-13 13:53:40,901 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 09:54:04] 2025-10-13 13:53:40,901 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 09:54:04] 2025-10-13 13:53:40,901 | INFO     | job 6842316708 has completed (purged errors)
[2025-10-13 09:54:04] 2025-10-13 13:53:40,901 | INFO     | overall cleanup function is called
[2025-10-13 09:54:04] 2025-10-13 13:53:41,909 | INFO     | --- collectZombieJob: --- 10, [526827]
[2025-10-13 09:54:04] 2025-10-13 13:53:41,909 | INFO     | zombie collector waiting for pid 526827
[2025-10-13 09:54:04] 2025-10-13 13:53:41,909 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 09:54:04] 2025-10-13 13:53:41,909 | INFO     | collected zombie processes
[2025-10-13 09:54:04] 2025-10-13 13:53:41,909 | INFO     | will attempt to kill all subprocesses of pid=526827
[2025-10-13 09:54:04] 2025-10-13 13:53:42,049 | INFO     | process IDs to be killed: [526827] (in reverse order)
[2025-10-13 09:54:04] 2025-10-13 13:53:42,098 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 09:54:04] 2025-10-13 13:53:42,099 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 09:54:04] 2025-10-13 13:53:42,103 | INFO     | did not find any defunct processes belonging to 526827
[2025-10-13 09:54:04] 2025-10-13 13:53:42,107 | INFO     | did not find any defunct processes belonging to 526827
[2025-10-13 09:54:04] 2025-10-13 13:53:42,107 | INFO     | ready for new job
[2025-10-13 09:54:04] 2025-10-13 13:53:42,107 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 09:54:04] 2025-10-13 13:53:42,108 | INFO     | ***************************************
[2025-10-13 09:54:04] 2025-10-13 13:53:42,108 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 09:54:04] 2025-10-13 13:53:42,108 | INFO     | ***************************************
[2025-10-13 09:54:04] 2025-10-13 13:53:42,108 | INFO     | 
[2025-10-13 09:54:04] 2025-10-13 13:53:42,110 | INFO     | architecture information:
[2025-10-13 09:54:04] 2025-10-13 13:53:42,110 | INFO     | executing command: cat /etc/os-release
[2025-10-13 09:54:04] 2025-10-13 13:53:42,121 | INFO     | cat /etc/os-release:
[2025-10-13 09:54:04] NAME="CentOS Linux"
[2025-10-13 09:54:04] VERSION="7 (Core)"
[2025-10-13 09:54:04] ID="centos"
[2025-10-13 09:54:04] ID_LIKE="rhel fedora"
[2025-10-13 09:54:04] VERSION_ID="7"
[2025-10-13 09:54:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 09:54:04] ANSI_COLOR="0;31"
[2025-10-13 09:54:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 09:54:04] HOME_URL="https://www.centos.org/"
[2025-10-13 09:54:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 09:54:04] 
[2025-10-13 09:54:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 09:54:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 09:54:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 09:54:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 09:54:04] 
[2025-10-13 09:54:04] 2025-10-13 13:53:42,121 | INFO     | ***************************************
[2025-10-13 09:54:04] 2025-10-13 13:53:42,624 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/3
[2025-10-13 09:54:04] 2025-10-13 13:53:42,636 | INFO     | sufficient remaining disk space (150834511872 B)
[2025-10-13 09:54:04] 2025-10-13 13:53:42,636 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 09:54:04] 2025-10-13 13:53:42,636 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 09:54:04] 2025-10-13 13:53:42,636 | INFO     | update_server=False
[2025-10-13 09:54:04] 2025-10-13 13:53:42,636 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 09:54:04] 2025-10-13 13:53:42,636 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-13 09:54:04] 2025-10-13 13:53:42,637 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 09:54:04] 2025-10-13 13:53:42,637 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 09:54:04] 2025-10-13 13:53:42,637 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 09:54:04] 2025-10-13 13:53:42,637 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 09:54:04] 2025-10-13 13:53:42,637 | INFO     | aborting loop
[2025-10-13 09:54:04] 2025-10-13 13:53:43,050 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 09:54:04] 2025-10-13 13:53:43,088 | INFO     | all data control threads have been joined
[2025-10-13 09:54:04] 2025-10-13 13:53:43,107 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 09:54:04] 2025-10-13 13:53:43,184 | INFO     | all job control threads have been joined
[2025-10-13 09:54:04] 2025-10-13 13:53:43,641 | INFO     | [job] retrieve thread has finished
[2025-10-13 09:54:04] 2025-10-13 13:53:43,642 | INFO     | [job] job monitor thread has finished
[2025-10-13 09:54:04] 2025-10-13 13:53:43,669 | INFO     | [data] copytool_in thread has finished
[2025-10-13 09:54:04] 2025-10-13 13:53:43,967 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 09:54:04] 2025-10-13 13:53:44,036 | INFO     | [payload] failed_post thread has finished
[2025-10-13 09:54:04] 2025-10-13 13:53:44,094 | INFO     | [data] control thread has finished
[2025-10-13 09:54:04] 2025-10-13 13:53:44,105 | INFO     | all payload control threads have been joined
[2025-10-13 09:54:04] 2025-10-13 13:53:44,187 | INFO     | [job] control thread has finished
[2025-10-13 09:54:04] 2025-10-13 13:53:44,464 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 09:54:04] 2025-10-13 13:53:44,714 | INFO     | [payload] validate_post thread has finished
[2025-10-13 09:54:04] 2025-10-13 13:53:45,023 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 09:54:04] 2025-10-13 13:53:45,055 | INFO     | [data] copytool_out thread has finished
[2025-10-13 09:54:04] 2025-10-13 13:53:45,070 | INFO     | [job] validate thread has finished
[2025-10-13 09:54:04] 2025-10-13 13:53:45,090 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 09:54:04] 2025-10-13 13:53:45,110 | INFO     | [payload] control thread has finished
[2025-10-13 09:54:04] 2025-10-13 13:53:45,472 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 09:54:04] 2025-10-13 13:53:46,477 | INFO     | [job] queue monitor thread has finished
[2025-10-13 09:54:04] 2025-10-13 13:53:47,112 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 09:54:04] 2025-10-13 13:53:57,727 | INFO     | [monitor] cgroup control has ended
[2025-10-13 09:54:04] 2025-10-13 13:53:59,002 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 130979353143104)>', '<ExcThread(monitor, started 130978567673600)>']
[2025-10-13 09:54:04] 2025-10-13 13:53:59,715 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 09:54:04] 2025-10-13 13:53:59,715 | INFO     | [monitor] control thread has ended
[2025-10-13 09:54:04] 2025-10-13 13:54:04,027 | INFO     | all workflow threads have been joined
[2025-10-13 09:54:04] 2025-10-13 13:54:04,027 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 09:54:04] 2025-10-13 13:54:04,027 | INFO     | traces error code: 0
[2025-10-13 09:54:04] 2025-10-13 13:54:04,027 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 09:54:04] 2025-10-13 13:54:04,100 [wrapper] ==== pilot stdout END ====
[2025-10-13 09:54:04] 2025-10-13 13:54:04,103 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 09:54:04] 2025-10-13 13:54:04,105 [wrapper] pilotpid: 520108
[2025-10-13 09:54:04] 2025-10-13 13:54:04,107 [wrapper] Pilot exit status: 0
[2025-10-13 09:54:04] 2025-10-13 13:54:04,114 [wrapper] pandaids: 6842316708
[2025-10-13 09:54:04] 2025-10-13 13:54:04,147 [wrapper] cleanup supervisor_pilot  688596 520109
[2025-10-13 09:54:04] 2025-10-13 13:54:04,149 [wrapper] Test setup, not cleaning
[2025-10-13 09:54:04] 2025-10-13 13:54:04,151 [wrapper] apfmon messages muted
[2025-10-13 09:54:04] 2025-10-13 13:54:04,153 [wrapper] ==== wrapper stdout END ====
[2025-10-13 09:54:04] 2025-10-13 13:54:04,155 [wrapper] ==== wrapper stderr END ====
[2025-10-13 09:54:04]  *** Error codes and diagnostics ***
[2025-10-13 09:54:04]     "exeErrorCode": 0,
[2025-10-13 09:54:04]     "exeErrorDiag": "",
[2025-10-13 09:54:04]     "pilotErrorCode": 0,
[2025-10-13 09:54:04]     "pilotErrorDiag": "",
[2025-10-13 09:54:04]  *** Listing of results directory ***
[2025-10-13 09:54:04] total 418316
[2025-10-13 09:54:04] -rw-r--r-- 1 boinc boinc    557409 Oct 12 23:15 pilot3.tar.gz
[2025-10-13 09:54:04] -rwx------ 1 boinc boinc     36292 Oct 12 23:40 runpilot2-wrapper.sh
[2025-10-13 09:54:04] -rw-r--r-- 1 boinc boinc      5112 Oct 12 23:40 queuedata.json
[2025-10-13 09:54:04] -rw-r--r-- 1 boinc boinc       100 Oct 13 07:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 09:54:04] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 07:57 run_atlas
[2025-10-13 09:54:04] -rw-r--r-- 1 boinc boinc       105 Oct 13 07:57 job.xml
[2025-10-13 09:54:04] -rw-r--r-- 2 boinc boinc     15120 Oct 13 07:57 start_atlas.sh
[2025-10-13 09:54:04] drwxrwx--x 2 boinc boinc      4096 Oct 13 07:57 shared
[2025-10-13 09:54:04] -rw-r--r-- 2 boinc boinc    569687 Oct 13 07:57 input.tar.gz
[2025-10-13 09:54:04] -rw-r--r-- 1 boinc boinc      9723 Oct 13 07:57 init_data.xml
[2025-10-13 09:54:04] -rw-r--r-- 2 boinc boinc 223413978 Oct 13 07:57 EVNT.46676267._001311.pool.root.1
[2025-10-13 09:54:04] -rw-r--r-- 1 boinc boinc         0 Oct 13 07:57 boinc_setup_complete
[2025-10-13 09:54:04] -rw-r--r-- 1 boinc boinc         0 Oct 13 07:57 boinc_lockfile
[2025-10-13 09:54:04] -rw-r--r-- 1 boinc boinc      2550 Oct 13 07:57 pandaJob.out
[2025-10-13 09:54:04] -rw------- 1 boinc boinc    972497 Oct 13 07:57 agis_schedconf.cvmfs.json
[2025-10-13 09:54:04] -rw------- 1 boinc boinc   1560580 Oct 13 07:57 agis_ddmendpoints.agis.ALL.json
[2025-10-13 09:54:04] drwx------ 5 boinc boinc      4096 Oct 13 07:57 pilot3
[2025-10-13 09:54:04] -rw------- 1 boinc boinc 198408315 Oct 13 09:53 HITS.46676269._096067.pool.root.1
[2025-10-13 09:54:04] -rw-r--r-- 1 boinc boinc       529 Oct 13 09:53 boinc_task_state.xml
[2025-10-13 09:54:04] -rw------- 1 boinc boinc      1031 Oct 13 09:53 memory_monitor_summary.json
[2025-10-13 09:54:04] -rw------- 1 boinc boinc    305461 Oct 13 09:53 log.46676269._096067.job.log.tgz.1
[2025-10-13 09:54:04] -rw------- 1 boinc boinc        95 Oct 13 09:53 pilot_heartbeat.json
[2025-10-13 09:54:04] -rw------- 1 boinc boinc      7734 Oct 13 09:53 heartbeat.json
[2025-10-13 09:54:04] -rw------- 1 boinc boinc      4560 Oct 13 09:54 pilotlog.txt
[2025-10-13 09:54:04] -rw------- 1 boinc boinc   1010931 Oct 13 09:54 log.46676269._096067.job.log.1
[2025-10-13 09:54:04] -rw------- 1 boinc boinc       357 Oct 13 09:54 output.list
[2025-10-13 09:54:04] -rw-r--r-- 1 boinc boinc       620 Oct 13 09:54 runtime_log
[2025-10-13 09:54:04] -rw------- 1 boinc boinc   1331200 Oct 13 09:54 result.tar.gz
[2025-10-13 09:54:04] -rw-r--r-- 1 boinc boinc      8764 Oct 13 09:54 runtime_log.err
[2025-10-13 09:54:04] -rw------- 1 boinc boinc       643 Oct 13 09:54 B3qLDmgbOS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmMfmNDmPF9GWo.diag
[2025-10-13 09:54:04] -rw-r--r-- 1 boinc boinc      8192 Oct 13 09:54 boinc_mmap_file
[2025-10-13 09:54:04] -rw-r--r-- 1 boinc boinc        27 Oct 13 09:54 wrapper_checkpoint.txt
[2025-10-13 09:54:04] -rw-r--r-- 1 boinc boinc     21205 Oct 13 09:54 stderr.txt
[2025-10-13 09:54:04] HITS file was successfully produced:
[2025-10-13 09:54:04] -rw------- 1 boinc boinc 198408315 Oct 13 09:53 shared/HITS.pool.root.1
[2025-10-13 09:54:04]  *** Contents of shared directory: ***
[2025-10-13 09:54:04] total 413824
[2025-10-13 09:54:04] -rw-r--r-- 2 boinc boinc     15120 Oct 13 07:57 start_atlas.sh
[2025-10-13 09:54:04] -rw-r--r-- 2 boinc boinc    569687 Oct 13 07:57 input.tar.gz
[2025-10-13 09:54:04] -rw-r--r-- 2 boinc boinc 223413978 Oct 13 07:57 ATLAS.root_0
[2025-10-13 09:54:04] -rw------- 1 boinc boinc 198408315 Oct 13 09:53 HITS.pool.root.1
[2025-10-13 09:54:04] -rw------- 1 boinc boinc   1331200 Oct 13 09:54 result.tar.gz
09:54:06 (516224): run_atlas exited; CPU time 27901.546432
09:54:06 (516224): called boinc_finish(0)

</stderr_txt>
]]>

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