Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
05:52:21 (347616): wrapper (7.7.26015): starting
05:52:21 (347616): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 05:52:21] Arguments: --nthreads 4
[2025-10-13 05:52:21] Threads: 4
[2025-10-13 05:52:21] Checking for CVMFS
[2025-10-13 05:52:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 05:52:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 05:52:21] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 05:52:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 05:52:21] 2.11.5.0 276960 0 53796 151656 3 186 3249094 4096001 1968 130560 0 177056 99.990 2788 3379 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-13 05:52:21] CVMFS is ok
[2025-10-13 05:52:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 05:52:21] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-13 05:52:21] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-13 05:52:21] Further information can be found at the LHC@home message board.
[2025-10-13 05:52:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 05:52:21] Checking for apptainer binary...
[2025-10-13 05:52:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 05:52:21] Running /usr/bin/apptainer --version
[2025-10-13 05:52:21] apptainer version 1.4.3
[2025-10-13 05:52:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 05:52:21] x32-linux3
[2025-10-13 05:52:21] apptainer works
[2025-10-13 05:52:21] Set ATHENA_PROC_NUMBER=4
[2025-10-13 05:52:21] Set ATHENA_CORE_NUMBER=4
[2025-10-13 05:52:22] Starting ATLAS job with PandaID=6842593035
[2025-10-13 05:52:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 07:56:48]  *** The last 200 lines of the pilot log: ***
[2025-10-13 07:56:48] 2025-10-13 11:55:46,168 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 07:56:48] 2025-10-13 11:55:47,645 | INFO     | time since job start (7397s) is within the limit (172800.0s)
[2025-10-13 07:56:48] 2025-10-13 11:55:48,067 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 07:56:48] 2025-10-13 11:55:48,071 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3532.076187499999
[2025-10-13 07:56:48] 2025-10-13 11:55:48,076 | INFO     | using path: /var/lib/boinc-client/slots/6/PanDA_Pilot-6842593035/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 07:56:48] 2025-10-13 11:55:48,076 | INFO     | extracted standard info from prmon json
[2025-10-13 07:56:48] 2025-10-13 11:55:48,077 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 07:56:48] 2025-10-13 11:55:48,077 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 07:56:48] 2025-10-13 11:55:48,077 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 07:56:48] 2025-10-13 11:55:48,077 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 07:56:48] 2025-10-13 11:55:48,078 | INFO     | fitting pss+swap vs Time
[2025-10-13 07:56:48] 2025-10-13 11:55:48,079 | INFO     | sum of square deviations: 549294020.0
[2025-10-13 07:56:48] 2025-10-13 11:55:48,079 | INFO     | sum of deviations: 11033108613.0
[2025-10-13 07:56:48] 2025-10-13 11:55:48,079 | INFO     | mean x: 1760352831.0
[2025-10-13 07:56:48] 2025-10-13 11:55:48,079 | INFO     | mean y: 2292400.512396694
[2025-10-13 07:56:48] 2025-10-13 11:55:48,079 | INFO     | -- intersect: -35356119077.59733
[2025-10-13 07:56:48] 2025-10-13 11:55:48,079 | INFO     | intersect: -35356119077.59733
[2025-10-13 07:56:48] 2025-10-13 11:55:48,080 | INFO     | chi2: 1.0776464494796512
[2025-10-13 07:56:48] 2025-10-13 11:55:48,080 | INFO     | sum of square deviations: 483971865.0
[2025-10-13 07:56:48] 2025-10-13 11:55:48,080 | INFO     | sum of deviations: 10523868779.000002
[2025-10-13 07:56:48] 2025-10-13 11:55:48,080 | INFO     | mean x: 1760352678.5
[2025-10-13 07:56:48] 2025-10-13 11:55:48,080 | INFO     | mean y: 2291209.9827586208
[2025-10-13 07:56:48] 2025-10-13 11:55:48,080 | INFO     | -- intersect: -38276216143.52875
[2025-10-13 07:56:48] 2025-10-13 11:55:48,081 | INFO     | intersect: -38276216143.52875
[2025-10-13 07:56:48] 2025-10-13 11:55:48,081 | INFO     | chi2: 1.079065058783376
[2025-10-13 07:56:48] 2025-10-13 11:55:48,081 | INFO     | current chi2=1.079065058783376 (change=-0.1316395840593113 %)
[2025-10-13 07:56:48] 2025-10-13 11:55:48,081 | INFO     | right removable region: 115
[2025-10-13 07:56:48] 2025-10-13 11:55:48,081 | INFO     | sum of square deviations: 483971865.0
[2025-10-13 07:56:48] 2025-10-13 11:55:48,081 | INFO     | sum of deviations: -130267146.99999979
[2025-10-13 07:56:48] 2025-10-13 11:55:48,081 | INFO     | mean x: 1760352983.5
[2025-10-13 07:56:48] 2025-10-13 11:55:48,082 | INFO     | mean y: 2317783.2586206896
[2025-10-13 07:56:48] 2025-10-13 11:55:48,082 | INFO     | -- intersect: 476139047.38000244
[2025-10-13 07:56:48] 2025-10-13 11:55:48,082 | INFO     | intersect: 476139047.38000244
[2025-10-13 07:56:48] 2025-10-13 11:55:48,082 | INFO     | chi2: 0.002979710073815153
[2025-10-13 07:56:48] 2025-10-13 11:55:48,082 | INFO     | current chi2=0.002979710073815153 (change=99.72349836300636 %)
[2025-10-13 07:56:48] 2025-10-13 11:55:48,082 | INFO     | sum of square deviations: 424045160.0
[2025-10-13 07:56:48] 2025-10-13 11:55:48,082 | INFO     | sum of deviations: -30305287.999999963
[2025-10-13 07:56:48] 2025-10-13 11:55:48,083 | INFO     | mean x: 1760353136.0
[2025-10-13 07:56:48] 2025-10-13 11:55:48,083 | INFO     | mean y: 2317520.1621621624
[2025-10-13 07:56:48] 2025-10-13 11:55:48,083 | INFO     | -- intersect: 128124895.88644373
[2025-10-13 07:56:48] 2025-10-13 11:55:48,083 | INFO     | intersect: 128124895.88644373
[2025-10-13 07:56:48] 2025-10-13 11:55:48,083 | INFO     | chi2: 0.0028883040360639673
[2025-10-13 07:56:48] 2025-10-13 11:55:48,083 | INFO     | current chi2=0.0028883040360639673 (change=3.0676151533814053 %)
[2025-10-13 07:56:48] 2025-10-13 11:55:48,083 | INFO     | left removable region: 20
[2025-10-13 07:56:48] 2025-10-13 11:55:48,083 | INFO     | sum of square deviations: 265828240.0
[2025-10-13 07:56:48] 2025-10-13 11:55:48,083 | INFO     | sum of deviations: 852852590.0
[2025-10-13 07:56:48] 2025-10-13 11:55:48,084 | INFO     | mean x: 1760353258.0
[2025-10-13 07:56:48] 2025-10-13 11:55:48,084 | INFO     | mean y: 2314359.694736842
[2025-10-13 07:56:48] 2025-10-13 11:55:48,084 | INFO     | -- intersect: -5645399500.203061
[2025-10-13 07:56:48] 2025-10-13 11:55:48,084 | INFO     | intersect: -5645399500.203061
[2025-10-13 07:56:48] 2025-10-13 11:55:48,084 | INFO     | chi2: 0.00014835196093427184
[2025-10-13 07:56:48] 2025-10-13 11:55:48,084 | INFO     | -- intersect: -5645399500.203061
[2025-10-13 07:56:48] 2025-10-13 11:55:48,084 | INFO     | current memory leak: 3.21 B/s (using 95 data points, chi2=0.00)
[2025-10-13 07:56:48] 2025-10-13 11:55:48,084 | INFO     | could have reported an average CPU frequency of 3373 MHz (8 samples)
[2025-10-13 07:56:48] 2025-10-13 11:55:48,084 | INFO     | ..............................
[2025-10-13 07:56:48] 2025-10-13 11:55:48,084 | INFO     | . Timing measurements:
[2025-10-13 07:56:48] 2025-10-13 11:55:48,085 | INFO     | . get job = 0 s
[2025-10-13 07:56:48] 2025-10-13 11:55:48,085 | INFO     | . initial setup = 1 s
[2025-10-13 07:56:48] 2025-10-13 11:55:48,085 | INFO     | . payload setup = 4 s
[2025-10-13 07:56:48] 2025-10-13 11:55:48,085 | INFO     | . stage-in = 0 s
[2025-10-13 07:56:48] 2025-10-13 11:55:48,085 | INFO     | . payload execution = 7367 s
[2025-10-13 07:56:48] 2025-10-13 11:55:48,085 | INFO     | . stage-out = 0 s
[2025-10-13 07:56:48] 2025-10-13 11:55:48,085 | INFO     | . log creation = 0 s
[2025-10-13 07:56:48] 2025-10-13 11:55:48,085 | INFO     | ..............................
[2025-10-13 07:56:48] 2025-10-13 11:55:48,150 | INFO     | 
[2025-10-13 07:56:48] 2025-10-13 11:55:48,150 | INFO     | job summary report
[2025-10-13 07:56:48] 2025-10-13 11:55:48,150 | INFO     | --------------------------------------------------
[2025-10-13 07:56:48] 2025-10-13 11:55:48,150 | INFO     | PanDA job id: 6842593035
[2025-10-13 07:56:48] 2025-10-13 11:55:48,150 | INFO     | task id: 46676269
[2025-10-13 07:56:48] 2025-10-13 11:55:48,150 | INFO     | errors: (none)
[2025-10-13 07:56:48] 2025-10-13 11:55:48,150 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 07:56:48] 2025-10-13 11:55:48,150 | INFO     | pilot state: finished 
[2025-10-13 07:56:48] 2025-10-13 11:55:48,150 | INFO     | transexitcode: 0
[2025-10-13 07:56:48] 2025-10-13 11:55:48,150 | INFO     | exeerrorcode: 0
[2025-10-13 07:56:48] 2025-10-13 11:55:48,150 | INFO     | exeerrordiag: 
[2025-10-13 07:56:48] 2025-10-13 11:55:48,150 | INFO     | exitcode: 0
[2025-10-13 07:56:48] 2025-10-13 11:55:48,150 | INFO     | exitmsg: OK
[2025-10-13 07:56:48] 2025-10-13 11:55:48,150 | INFO     | cpuconsumptiontime: 28343 s
[2025-10-13 07:56:48] 2025-10-13 11:55:48,151 | INFO     | nevents: 400
[2025-10-13 07:56:48] 2025-10-13 11:55:48,151 | INFO     | neventsw: 0
[2025-10-13 07:56:48] 2025-10-13 11:55:48,151 | INFO     | pid: 401831
[2025-10-13 07:56:48] 2025-10-13 11:55:48,151 | INFO     | pgrp: 401831
[2025-10-13 07:56:48] 2025-10-13 11:55:48,151 | INFO     | corecount: 4
[2025-10-13 07:56:48] 2025-10-13 11:55:48,151 | INFO     | event service: False
[2025-10-13 07:56:48] 2025-10-13 11:55:48,151 | INFO     | sizes: {0: 2348592, 1: 2348791, 4: 2349053, 11: 2349081, 7375: 2376720, 7376: 2376719, 7378: 2385915, 7381: 2385971, 7384: 2385995}
[2025-10-13 07:56:48] 2025-10-13 11:55:48,151 | INFO     | --------------------------------------------------
[2025-10-13 07:56:48] 2025-10-13 11:55:48,151 | INFO     | 
[2025-10-13 07:56:48] 2025-10-13 11:55:48,151 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/6
[2025-10-13 07:56:48] 2025-10-13 11:55:48,164 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 07:56:48] 2025-10-13 11:55:48,165 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 07:56:48] 2025-10-13 11:55:48,165 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 07:56:48] 2025-10-13 11:55:48,165 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 07:56:48] 2025-10-13 11:55:48,165 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 07:56:48] 2025-10-13 11:55:48,165 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 07:56:48] 2025-10-13 11:55:48,165 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 07:56:48] 2025-10-13 11:55:48,165 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 07:56:48] 2025-10-13 11:55:48,165 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 07:56:48] 2025-10-13 11:55:48,165 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 07:56:48] 2025-10-13 11:55:48,165 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 07:56:48] 2025-10-13 11:55:48,165 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 07:56:48] 2025-10-13 11:55:48,165 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 07:56:48] 2025-10-13 11:55:48,165 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 07:56:48] 2025-10-13 11:55:48,165 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 07:56:48] 2025-10-13 11:55:48,165 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 07:56:48] 2025-10-13 11:55:48,166 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 07:56:48] 2025-10-13 11:55:48,166 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 07:56:48] 2025-10-13 11:55:48,166 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 07:56:48] 2025-10-13 11:55:48,166 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 07:56:48] 2025-10-13 11:55:48,166 | INFO     | job 6842593035 has completed (purged errors)
[2025-10-13 07:56:48] 2025-10-13 11:55:48,166 | INFO     | overall cleanup function is called
[2025-10-13 07:56:48] 2025-10-13 11:55:49,173 | INFO     | --- collectZombieJob: --- 10, [401831]
[2025-10-13 07:56:48] 2025-10-13 11:55:49,173 | INFO     | zombie collector waiting for pid 401831
[2025-10-13 07:56:48] 2025-10-13 11:55:49,173 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 07:56:48] 2025-10-13 11:55:49,173 | INFO     | collected zombie processes
[2025-10-13 07:56:48] 2025-10-13 11:55:49,173 | INFO     | will attempt to kill all subprocesses of pid=401831
[2025-10-13 07:56:48] 2025-10-13 11:55:49,308 | INFO     | process IDs to be killed: [401831] (in reverse order)
[2025-10-13 07:56:48] 2025-10-13 11:55:49,359 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 07:56:48] 2025-10-13 11:55:49,359 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 07:56:48] 2025-10-13 11:55:49,363 | INFO     | did not find any defunct processes belonging to 401831
[2025-10-13 07:56:48] 2025-10-13 11:55:49,367 | INFO     | did not find any defunct processes belonging to 401831
[2025-10-13 07:56:48] 2025-10-13 11:55:49,367 | INFO     | ready for new job
[2025-10-13 07:56:48] 2025-10-13 11:55:49,367 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 07:56:48] 2025-10-13 11:55:49,369 | INFO     | ***************************************
[2025-10-13 07:56:48] 2025-10-13 11:55:49,369 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 07:56:48] 2025-10-13 11:55:49,369 | INFO     | ***************************************
[2025-10-13 07:56:48] 2025-10-13 11:55:49,369 | INFO     | 
[2025-10-13 07:56:48] 2025-10-13 11:55:49,390 | INFO     | architecture information:
[2025-10-13 07:56:48] 2025-10-13 11:55:49,391 | INFO     | executing command: cat /etc/os-release
[2025-10-13 07:56:48] 2025-10-13 11:55:49,402 | INFO     | cat /etc/os-release:
[2025-10-13 07:56:48] NAME="CentOS Linux"
[2025-10-13 07:56:48] VERSION="7 (Core)"
[2025-10-13 07:56:48] ID="centos"
[2025-10-13 07:56:48] ID_LIKE="rhel fedora"
[2025-10-13 07:56:48] VERSION_ID="7"
[2025-10-13 07:56:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 07:56:48] ANSI_COLOR="0;31"
[2025-10-13 07:56:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 07:56:48] HOME_URL="https://www.centos.org/"
[2025-10-13 07:56:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 07:56:48] 
[2025-10-13 07:56:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 07:56:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 07:56:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 07:56:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 07:56:48] 
[2025-10-13 07:56:48] 2025-10-13 11:55:49,402 | INFO     | ***************************************
[2025-10-13 07:56:48] 2025-10-13 11:55:49,905 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/6
[2025-10-13 07:56:48] 2025-10-13 11:55:49,916 | INFO     | sufficient remaining disk space (398508163072 B)
[2025-10-13 07:56:48] 2025-10-13 11:55:49,916 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 07:56:48] 2025-10-13 11:55:49,916 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 07:56:48] 2025-10-13 11:55:49,916 | INFO     | update_server=False
[2025-10-13 07:56:48] 2025-10-13 11:55:49,916 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 07:56:48] 2025-10-13 11:55:49,917 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 07:56:48] 2025-10-13 11:55:49,917 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:56:48] 2025-10-13 11:55:49,917 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:56:48] 2025-10-13 11:55:49,917 | INFO     | aborting loop
[2025-10-13 07:56:48] 2025-10-13 11:55:50,177 | INFO     | all job control threads have been joined
[2025-10-13 07:56:48] 2025-10-13 11:55:50,233 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 07:56:48] 2025-10-13 11:55:50,857 | INFO     | all payload control threads have been joined
[2025-10-13 07:56:48] 2025-10-13 11:55:50,921 | INFO     | [job] retrieve thread has finished
[2025-10-13 07:56:48] 2025-10-13 11:55:50,921 | INFO     | [job] queue monitor thread has finished
[2025-10-13 07:56:48] 2025-10-13 11:55:50,923 | INFO     | [job] job monitor thread has finished
[2025-10-13 07:56:48] 2025-10-13 11:55:50,961 | INFO     | all data control threads have been joined
[2025-10-13 07:56:48] 2025-10-13 11:55:51,181 | INFO     | [job] control thread has finished
[2025-10-13 07:56:48] 2025-10-13 11:55:51,181 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 07:56:48] 2025-10-13 11:55:51,417 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 07:56:48] 2025-10-13 11:55:51,469 | INFO     | [job] validate thread has finished
[2025-10-13 07:56:48] 2025-10-13 11:55:51,517 | INFO     | [payload] validate_post thread has finished
[2025-10-13 07:56:48] 2025-10-13 11:55:51,542 | INFO     | [data] copytool_in thread has finished
[2025-10-13 07:56:48] 2025-10-13 11:55:51,763 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 07:56:48] 2025-10-13 11:55:51,860 | INFO     | [payload] control thread has finished
[2025-10-13 07:56:48] 2025-10-13 11:55:51,920 | INFO     | [data] copytool_out thread has finished
[2025-10-13 07:56:48] 2025-10-13 11:55:51,965 | INFO     | [data] control thread has finished
[2025-10-13 07:56:48] 2025-10-13 11:55:52,177 | INFO     | [payload] failed_post thread has finished
[2025-10-13 07:56:48] 2025-10-13 11:55:54,237 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 07:56:48] 2025-10-13 11:56:00,227 | INFO     | job.realtimelogging is not enabled
[2025-10-13 07:56:48] 2025-10-13 11:56:01,232 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 07:56:48] 2025-10-13 11:56:20,871 | INFO     | PID=358929 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 07:56:48] 2025-10-13 11:56:20,872 | INFO     | .. there are 8 such processes running
[2025-10-13 07:56:48] 2025-10-13 11:56:20,872 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 07:56:48] 2025-10-13 11:56:20,872 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 07:56:48] 2025-10-13 11:56:20,872 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 07:56:48] 2025-10-13 11:56:42,077 | INFO     | [monitor] cgroup control has ended
[2025-10-13 07:56:48] 2025-10-13 11:56:43,069 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139871393806144)>', '<ExcThread(monitor, started 139870970308352)>']
[2025-10-13 07:56:48] 2025-10-13 11:56:43,985 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 07:56:48] 2025-10-13 11:56:43,985 | INFO     | [monitor] control thread has ended
[2025-10-13 07:56:48] 2025-10-13 11:56:48,093 | INFO     | all workflow threads have been joined
[2025-10-13 07:56:48] 2025-10-13 11:56:48,093 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 07:56:48] 2025-10-13 11:56:48,093 | INFO     | traces error code: 0
[2025-10-13 07:56:48] 2025-10-13 11:56:48,093 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 07:56:48] 2025-10-13 11:56:48,176 [wrapper] ==== pilot stdout END ====
[2025-10-13 07:56:48] 2025-10-13 11:56:48,178 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 07:56:48] 2025-10-13 11:56:48,181 [wrapper] pilotpid: 358929
[2025-10-13 07:56:48] 2025-10-13 11:56:48,183 [wrapper] Pilot exit status: 0
[2025-10-13 07:56:48] 2025-10-13 11:56:48,191 [wrapper] pandaids: 6842593035
[2025-10-13 07:56:48] 2025-10-13 11:56:48,226 [wrapper] cleanup supervisor_pilot  545049 358931
[2025-10-13 07:56:48] 2025-10-13 11:56:48,228 [wrapper] Test setup, not cleaning
[2025-10-13 07:56:48] 2025-10-13 11:56:48,230 [wrapper] apfmon messages muted
[2025-10-13 07:56:48] 2025-10-13 11:56:48,232 [wrapper] ==== wrapper stdout END ====
[2025-10-13 07:56:48] 2025-10-13 11:56:48,234 [wrapper] ==== wrapper stderr END ====
[2025-10-13 07:56:48]  *** Error codes and diagnostics ***
[2025-10-13 07:56:48]     "exeErrorCode": 0,
[2025-10-13 07:56:48]     "exeErrorDiag": "",
[2025-10-13 07:56:48]     "pilotErrorCode": 0,
[2025-10-13 07:56:48]     "pilotErrorDiag": "",
[2025-10-13 07:56:48]  *** Listing of results directory ***
[2025-10-13 07:56:48] total 408968
[2025-10-13 07:56:48] -rw-r--r-- 1 boinc boinc      5112 Oct 13 01:16 queuedata.json
[2025-10-13 07:56:48] -rw-r--r-- 1 boinc boinc    557409 Oct 13 01:17 pilot3.tar.gz
[2025-10-13 07:56:48] -rwx------ 1 boinc boinc     36292 Oct 13 01:18 runpilot2-wrapper.sh
[2025-10-13 07:56:48] -rw-r--r-- 1 boinc boinc       100 Oct 13 05:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 07:56:48] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 05:52 run_atlas
[2025-10-13 07:56:48] -rw-r--r-- 1 boinc boinc       105 Oct 13 05:52 job.xml
[2025-10-13 07:56:48] -rw-r--r-- 2 boinc boinc     15120 Oct 13 05:52 start_atlas.sh
[2025-10-13 07:56:48] drwxrwx--x 2 boinc boinc      4096 Oct 13 05:52 shared
[2025-10-13 07:56:48] -rw-r--r-- 2 boinc boinc    569686 Oct 13 05:52 input.tar.gz
[2025-10-13 07:56:48] -rw-r--r-- 1 boinc boinc      9157 Oct 13 05:52 init_data.xml
[2025-10-13 07:56:48] -rw-r--r-- 2 boinc boinc 219065403 Oct 13 05:52 EVNT.46676267._004504.pool.root.1
[2025-10-13 07:56:48] -rw-r--r-- 1 boinc boinc         0 Oct 13 05:52 boinc_setup_complete
[2025-10-13 07:56:48] -rw-r--r-- 1 boinc boinc         0 Oct 13 05:52 boinc_lockfile
[2025-10-13 07:56:48] -rw-r--r-- 1 boinc boinc      2549 Oct 13 05:52 pandaJob.out
[2025-10-13 07:56:48] -rw------- 1 boinc boinc    972849 Oct 13 05:52 agis_schedconf.cvmfs.json
[2025-10-13 07:56:48] -rw------- 1 boinc boinc   1560580 Oct 13 05:52 agis_ddmendpoints.agis.ALL.json
[2025-10-13 07:56:48] drwx------ 5 boinc boinc      4096 Oct 13 05:52 pilot3
[2025-10-13 07:56:48] -rw-r--r-- 1 boinc boinc       530 Oct 13 07:55 boinc_task_state.xml
[2025-10-13 07:56:48] -rw------- 1 boinc boinc 193064905 Oct 13 07:55 HITS.46676269._096339.pool.root.1
[2025-10-13 07:56:48] -rw------- 1 boinc boinc        95 Oct 13 07:55 pilot_heartbeat.json
[2025-10-13 07:56:48] -rw------- 1 boinc boinc      1023 Oct 13 07:55 memory_monitor_summary.json
[2025-10-13 07:56:48] -rw------- 1 boinc boinc    308805 Oct 13 07:55 log.46676269._096339.job.log.tgz.1
[2025-10-13 07:56:48] -rw------- 1 boinc boinc      7740 Oct 13 07:55 heartbeat.json
[2025-10-13 07:56:48] -rw-r--r-- 1 boinc boinc      8192 Oct 13 07:56 boinc_mmap_file
[2025-10-13 07:56:48] -rw-r--r-- 1 boinc boinc        27 Oct 13 07:56 wrapper_checkpoint.txt
[2025-10-13 07:56:48] -rw------- 1 boinc boinc      4902 Oct 13 07:56 pilotlog.txt
[2025-10-13 07:56:48] -rw------- 1 boinc boinc   1068981 Oct 13 07:56 log.46676269._096339.job.log.1
[2025-10-13 07:56:48] -rw------- 1 boinc boinc       357 Oct 13 07:56 output.list
[2025-10-13 07:56:48] -rw-r--r-- 1 boinc boinc       620 Oct 13 07:56 runtime_log
[2025-10-13 07:56:48] -rw------- 1 boinc boinc   1392640 Oct 13 07:56 result.tar.gz
[2025-10-13 07:56:48] -rw-r--r-- 1 boinc boinc      8764 Oct 13 07:56 runtime_log.err
[2025-10-13 07:56:48] -rw------- 1 boinc boinc       644 Oct 13 07:56 cSDNDmx7PS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmThVMDmhaYTPm.diag
[2025-10-13 07:56:48] -rw-r--r-- 1 boinc boinc     21188 Oct 13 07:56 stderr.txt
[2025-10-13 07:56:48] HITS file was successfully produced:
[2025-10-13 07:56:48] -rw------- 1 boinc boinc 193064905 Oct 13 07:55 shared/HITS.pool.root.1
[2025-10-13 07:56:48]  *** Contents of shared directory: ***
[2025-10-13 07:56:48] total 404416
[2025-10-13 07:56:48] -rw-r--r-- 2 boinc boinc     15120 Oct 13 05:52 start_atlas.sh
[2025-10-13 07:56:48] -rw-r--r-- 2 boinc boinc    569686 Oct 13 05:52 input.tar.gz
[2025-10-13 07:56:48] -rw-r--r-- 2 boinc boinc 219065403 Oct 13 05:52 ATLAS.root_0
[2025-10-13 07:56:48] -rw------- 1 boinc boinc 193064905 Oct 13 07:55 HITS.pool.root.1
[2025-10-13 07:56:48] -rw------- 1 boinc boinc   1392640 Oct 13 07:56 result.tar.gz
07:56:50 (347616): run_atlas exited; CPU time 28444.619875
07:56:50 (347616): called boinc_finish(0)

</stderr_txt>
]]>

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