Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:14:10 (3249974): wrapper (7.7.26015): starting
06:14:10 (3249974): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 06:14:10] Arguments: --nthreads 12
[2025-10-13 06:14:10] Threads: 12
[2025-10-13 06:14:10] Checking for CVMFS
[2025-10-13 06:14:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 06:14:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 06:14:10] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 06:14:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 06:14:10] 2.13.2.0 3683012 14093 151212 151658 3 16 38539348 40960000 4821 16776704 0 164115746 99.875 55118607 32598 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 06:14:10] CVMFS is ok
[2025-10-13 06:14:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 06:14:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 06:14:10] Further information can be found at the LHC@home message board.
[2025-10-13 06:14:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 06:14:10] Checking for apptainer binary...
[2025-10-13 06:14:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 06:14:10] Running /usr/bin/apptainer --version
[2025-10-13 06:14:10] apptainer version 1.4.3-1.el9
[2025-10-13 06:14:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 06:14:10] c8-7-4.aglt2.org
[2025-10-13 06:14:10] apptainer works
[2025-10-13 06:14:10] Set ATHENA_PROC_NUMBER=12
[2025-10-13 06:14:10] Set ATHENA_CORE_NUMBER=12
[2025-10-13 06:14:10] Starting ATLAS job with PandaID=6841495884
[2025-10-13 06:14:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 06:38:29]  *** The last 200 lines of the pilot log: ***
[2025-10-13 06:38:29]  lfn=log.46676269._095215.job.log.tgz.1
[2025-10-13 06:38:29]  mtime=0
[2025-10-13 06:38:29]  protocol_id=None
[2025-10-13 06:38:29]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-13 06:38:29]  replicas=None
[2025-10-13 06:38:29]  scope=mc23_13p6TeV
[2025-10-13 06:38:29]  status=None
[2025-10-13 06:38:29]  status_code=0
[2025-10-13 06:38:29]  storage_token=
[2025-10-13 06:38:29]  surl=/tmp/boinchome/slots/4/PanDA_Pilot-6841495884/log.46676269._095215.job.log.tgz.1
[2025-10-13 06:38:29]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ce/60/log.46676269._095215.job.log.tgz.1
[2025-10-13 06:38:29]  workdir=None
[2025-10-13 06:38:29] ]
[2025-10-13 06:38:29] 2025-10-13 10:37:53,556 | INFO     | transferring file log.46676269._095215.job.log.tgz.1 from /tmp/boinchome/slots/4/PanDA_Pilot-6841495884/log.46676269._095215.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-13 06:38:29] 2025-10-13 10:37:53,556 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/4/PanDA_Pilot-6841495884/log.46676269._095215.job.log.tgz.1 /tmp/boinchome/slots/4/log.46676269._095215.job
[2025-10-13 06:38:29] 2025-10-13 10:37:53,567 | INFO     | adding to output.list: log.46676269._095215.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ce/60/log.46676269._095215.job.log.tg
[2025-10-13 06:38:29] 2025-10-13 10:37:53,568 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 06:38:29] 2025-10-13 10:37:53,568 | INFO     | summary of transferred files:
[2025-10-13 06:38:29] 2025-10-13 10:37:53,568 | INFO     |  -- lfn=log.46676269._095215.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 06:38:29] 2025-10-13 10:37:53,568 | INFO     | stage-out finished correctly
[2025-10-13 06:38:29] 2025-10-13 10:37:54,027 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 06:38:29] 2025-10-13 10:37:54,287 | INFO     | job 6841495884 has state=finished
[2025-10-13 06:38:29] 2025-10-13 10:37:54,288 | INFO     | preparing for final server update for job 6841495884 in state='finished'
[2025-10-13 06:38:29] 2025-10-13 10:37:54,288 | INFO     | this job has now completed (state=finished)
[2025-10-13 06:38:29] 2025-10-13 10:37:54,288 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 06:38:29] 2025-10-13 10:37:54,288 | INFO     | log transfer has been attempted: DONE
[2025-10-13 06:38:29] 2025-10-13 10:37:54,288 | INFO     | job 6841495884 has finished - writing final server update
[2025-10-13 06:38:29] 2025-10-13 10:37:54,288 | INFO     | total number of processed events: 400 (read)
[2025-10-13 06:38:29] 2025-10-13 10:37:54,289 | INFO     | executing command: lscpu
[2025-10-13 06:38:29] 2025-10-13 10:37:54,293 | INFO     | time since job start (1416s) is within the limit (172800.0s)
[2025-10-13 06:38:29] 2025-10-13 10:37:54,340 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 06:38:29] 2025-10-13 10:37:55,994 | WARNING  | process 3260176 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 06:38:29] 2025-10-13 10:37:55,994 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6841495884/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 06:38:29] 2025-10-13 10:37:56,203 | INFO     | number of running child processes to parent process 3260176: 1
[2025-10-13 06:38:29] 2025-10-13 10:37:56,203 | INFO     | maximum number of monitored processes: 6
[2025-10-13 06:38:29] 2025-10-13 10:37:56,299 | INFO     | time since job start (1418s) is within the limit (172800.0s)
[2025-10-13 06:38:29] 2025-10-13 10:37:57,035 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-13 06:38:29] 2025-10-13 10:37:57,051 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3452.120492187493
[2025-10-13 06:38:29] 2025-10-13 10:37:57,072 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6841495884/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 06:38:29] 2025-10-13 10:37:57,073 | INFO     | extracted standard info from prmon json
[2025-10-13 06:38:29] 2025-10-13 10:37:57,073 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 06:38:29] 2025-10-13 10:37:57,073 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 06:38:29] 2025-10-13 10:37:57,073 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 06:38:29] 2025-10-13 10:37:57,073 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 06:38:29] 2025-10-13 10:37:57,074 | INFO     | fitting pss+swap vs Time
[2025-10-13 06:38:29] 2025-10-13 10:37:57,074 | INFO     | sum of square deviations: 1265140.0
[2025-10-13 06:38:29] 2025-10-13 10:37:57,074 | INFO     | sum of deviations: -8345715.0
[2025-10-13 06:38:29] 2025-10-13 10:37:57,074 | INFO     | mean x: 1760351240.5
[2025-10-13 06:38:29] 2025-10-13 10:37:57,074 | INFO     | mean y: 2435155.5
[2025-10-13 06:38:29] 2025-10-13 10:37:57,074 | INFO     | -- intersect: 11614896822.279531
[2025-10-13 06:38:29] 2025-10-13 10:37:57,074 | INFO     | intersect: 11614896822.279531
[2025-10-13 06:38:29] 2025-10-13 10:37:57,074 | INFO     | chi2: 0.0010424220848290978
[2025-10-13 06:38:29] 2025-10-13 10:37:57,074 | INFO     | -- intersect: 11614896822.279531
[2025-10-13 06:38:29] 2025-10-13 10:37:57,074 | INFO     | current memory leak: -6.60 B/s (using 16 data points, chi2=0.00)
[2025-10-13 06:38:29] 2025-10-13 10:37:57,075 | INFO     | could have reported an average CPU frequency of 3459 MHz (4 samples)
[2025-10-13 06:38:29] 2025-10-13 10:37:57,075 | INFO     | ..............................
[2025-10-13 06:38:29] 2025-10-13 10:37:57,075 | INFO     | . Timing measurements:
[2025-10-13 06:38:29] 2025-10-13 10:37:57,075 | INFO     | . get job = 0 s
[2025-10-13 06:38:29] 2025-10-13 10:37:57,075 | INFO     | . initial setup = 2 s
[2025-10-13 06:38:29] 2025-10-13 10:37:57,075 | INFO     | . payload setup = 3 s
[2025-10-13 06:38:29] 2025-10-13 10:37:57,075 | INFO     | . stage-in = 0 s
[2025-10-13 06:38:29] 2025-10-13 10:37:57,075 | INFO     | . payload execution = 1394 s
[2025-10-13 06:38:29] 2025-10-13 10:37:57,075 | INFO     | . stage-out = 0 s
[2025-10-13 06:38:29] 2025-10-13 10:37:57,075 | INFO     | . log creation = 0 s
[2025-10-13 06:38:29] 2025-10-13 10:37:57,075 | INFO     | ..............................
[2025-10-13 06:38:29] 2025-10-13 10:37:57,107 | INFO     | 
[2025-10-13 06:38:29] 2025-10-13 10:37:57,108 | INFO     | job summary report
[2025-10-13 06:38:29] 2025-10-13 10:37:57,108 | INFO     | --------------------------------------------------
[2025-10-13 06:38:29] 2025-10-13 10:37:57,108 | INFO     | PanDA job id: 6841495884
[2025-10-13 06:38:29] 2025-10-13 10:37:57,108 | INFO     | task id: 46676269
[2025-10-13 06:38:29] 2025-10-13 10:37:57,108 | INFO     | errors: (none)
[2025-10-13 06:38:29] 2025-10-13 10:37:57,108 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 06:38:29] 2025-10-13 10:37:57,108 | INFO     | pilot state: finished 
[2025-10-13 06:38:29] 2025-10-13 10:37:57,108 | INFO     | transexitcode: 0
[2025-10-13 06:38:29] 2025-10-13 10:37:57,108 | INFO     | exeerrorcode: 0
[2025-10-13 06:38:29] 2025-10-13 10:37:57,108 | INFO     | exeerrordiag: 
[2025-10-13 06:38:29] 2025-10-13 10:37:57,108 | INFO     | exitcode: 0
[2025-10-13 06:38:29] 2025-10-13 10:37:57,108 | INFO     | exitmsg: OK
[2025-10-13 06:38:29] 2025-10-13 10:37:57,108 | INFO     | cpuconsumptiontime: 15117 s
[2025-10-13 06:38:29] 2025-10-13 10:37:57,108 | INFO     | nevents: 400
[2025-10-13 06:38:29] 2025-10-13 10:37:57,108 | INFO     | neventsw: 0
[2025-10-13 06:38:29] 2025-10-13 10:37:57,108 | INFO     | pid: 3260176
[2025-10-13 06:38:29] 2025-10-13 10:37:57,108 | INFO     | pgrp: 3260176
[2025-10-13 06:38:29] 2025-10-13 10:37:57,108 | INFO     | corecount: 12
[2025-10-13 06:38:29] 2025-10-13 10:37:57,109 | INFO     | event service: False
[2025-10-13 06:38:29] 2025-10-13 10:37:57,109 | INFO     | sizes: {0: 2348741, 1: 2348741, 3: 2349117, 11: 2349145, 1401: 2373924, 1402: 2383106, 1405: 2383244}
[2025-10-13 06:38:29] 2025-10-13 10:37:57,109 | INFO     | --------------------------------------------------
[2025-10-13 06:38:29] 2025-10-13 10:37:57,109 | INFO     | 
[2025-10-13 06:38:29] 2025-10-13 10:37:57,109 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-10-13 06:38:29] 2025-10-13 10:37:57,123 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 06:38:29] 2025-10-13 10:37:57,123 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 06:38:29] 2025-10-13 10:37:57,123 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 06:38:29] 2025-10-13 10:37:57,123 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 06:38:29] 2025-10-13 10:37:57,123 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 06:38:29] 2025-10-13 10:37:57,123 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 06:38:29] 2025-10-13 10:37:57,123 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 06:38:29] 2025-10-13 10:37:57,123 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 06:38:29] 2025-10-13 10:37:57,123 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 06:38:29] 2025-10-13 10:37:57,123 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 06:38:29] 2025-10-13 10:37:57,123 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 06:38:29] 2025-10-13 10:37:57,123 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 06:38:29] 2025-10-13 10:37:57,123 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 06:38:29] 2025-10-13 10:37:57,123 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 06:38:29] 2025-10-13 10:37:57,123 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 06:38:29] 2025-10-13 10:37:57,123 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 06:38:29] 2025-10-13 10:37:57,123 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 06:38:29] 2025-10-13 10:37:57,123 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 06:38:29] 2025-10-13 10:37:57,123 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 06:38:29] 2025-10-13 10:37:57,123 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 06:38:29] 2025-10-13 10:37:57,124 | INFO     | job 6841495884 has completed (purged errors)
[2025-10-13 06:38:29] 2025-10-13 10:37:57,124 | INFO     | overall cleanup function is called
[2025-10-13 06:38:29] 2025-10-13 10:37:58,131 | INFO     | --- collectZombieJob: --- 10, [3260176]
[2025-10-13 06:38:29] 2025-10-13 10:37:58,131 | INFO     | zombie collector waiting for pid 3260176
[2025-10-13 06:38:29] 2025-10-13 10:37:58,131 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 06:38:29] 2025-10-13 10:37:58,131 | INFO     | collected zombie processes
[2025-10-13 06:38:29] 2025-10-13 10:37:58,131 | INFO     | will attempt to kill all subprocesses of pid=3260176
[2025-10-13 06:38:29] 2025-10-13 10:37:58,337 | INFO     | process IDs to be killed: [3260176] (in reverse order)
[2025-10-13 06:38:29] 2025-10-13 10:37:58,423 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 06:38:29] 2025-10-13 10:37:58,424 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 06:38:29] 2025-10-13 10:37:58,434 | INFO     | did not find any defunct processes belonging to 3260176
[2025-10-13 06:38:29] 2025-10-13 10:37:58,441 | INFO     | did not find any defunct processes belonging to 3260176
[2025-10-13 06:38:29] 2025-10-13 10:37:58,441 | INFO     | ready for new job
[2025-10-13 06:38:29] 2025-10-13 10:37:58,441 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 06:38:29] 2025-10-13 10:37:58,443 | INFO     | ***************************************
[2025-10-13 06:38:29] 2025-10-13 10:37:58,443 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 06:38:29] 2025-10-13 10:37:58,443 | INFO     | ***************************************
[2025-10-13 06:38:29] 2025-10-13 10:37:58,443 | INFO     | 
[2025-10-13 06:38:29] 2025-10-13 10:37:58,458 | INFO     | architecture information:
[2025-10-13 06:38:29] 2025-10-13 10:37:58,458 | INFO     | executing command: cat /etc/os-release
[2025-10-13 06:38:29] 2025-10-13 10:37:58,470 | INFO     | cat /etc/os-release:
[2025-10-13 06:38:29] NAME="CentOS Linux"
[2025-10-13 06:38:29] VERSION="7 (Core)"
[2025-10-13 06:38:29] ID="centos"
[2025-10-13 06:38:29] ID_LIKE="rhel fedora"
[2025-10-13 06:38:29] VERSION_ID="7"
[2025-10-13 06:38:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 06:38:29] ANSI_COLOR="0;31"
[2025-10-13 06:38:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 06:38:29] HOME_URL="https://www.centos.org/"
[2025-10-13 06:38:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 06:38:29] 
[2025-10-13 06:38:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 06:38:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 06:38:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 06:38:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 06:38:29] 
[2025-10-13 06:38:29] 2025-10-13 10:37:58,470 | INFO     | ***************************************
[2025-10-13 06:38:29] 2025-10-13 10:37:58,972 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-10-13 06:38:29] 2025-10-13 10:37:58,981 | INFO     | sufficient remaining disk space (169314615296 B)
[2025-10-13 06:38:29] 2025-10-13 10:37:58,981 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 06:38:29] 2025-10-13 10:37:58,981 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 06:38:29] 2025-10-13 10:37:58,981 | INFO     | update_server=False
[2025-10-13 06:38:29] 2025-10-13 10:37:58,981 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 06:38:29] 2025-10-13 10:37:58,982 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:38:29] 2025-10-13 10:37:59,079 | INFO     | all payload control threads have been joined
[2025-10-13 06:38:29] 2025-10-13 10:37:59,105 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 06:38:29] 2025-10-13 10:37:59,180 | INFO     | all data control threads have been joined
[2025-10-13 06:38:29] 2025-10-13 10:37:59,523 | INFO     | all job control threads have been joined
[2025-10-13 06:38:29] 2025-10-13 10:37:59,711 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:38:29] 2025-10-13 10:37:59,712 | INFO     | aborting loop
[2025-10-13 06:38:29] 2025-10-13 10:37:59,986 | INFO     | [job] retrieve thread has finished
[2025-10-13 06:38:29] 2025-10-13 10:37:59,987 | INFO     | [job] queue monitor thread has finished
[2025-10-13 06:38:29] 2025-10-13 10:38:00,085 | INFO     | [payload] control thread has finished
[2025-10-13 06:38:29] 2025-10-13 10:38:00,085 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 06:38:29] 2025-10-13 10:38:00,139 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 06:38:29] 2025-10-13 10:38:00,185 | INFO     | [data] control thread has finished
[2025-10-13 06:38:29] 2025-10-13 10:38:00,211 | INFO     | [payload] validate_post thread has finished
[2025-10-13 06:38:29] 2025-10-13 10:38:00,528 | INFO     | [job] control thread has finished
[2025-10-13 06:38:29] 2025-10-13 10:38:00,590 | INFO     | [payload] failed_post thread has finished
[2025-10-13 06:38:29] 2025-10-13 10:38:00,716 | INFO     | [job] job monitor thread has finished
[2025-10-13 06:38:29] 2025-10-13 10:38:00,736 | INFO     | [job] validate thread has finished
[2025-10-13 06:38:29] 2025-10-13 10:38:00,790 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 06:38:29] 2025-10-13 10:38:00,814 | INFO     | [data] copytool_in thread has finished
[2025-10-13 06:38:29] 2025-10-13 10:38:00,879 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 06:38:29] 2025-10-13 10:38:01,107 | INFO     | [data] copytool_out thread has finished
[2025-10-13 06:38:29] 2025-10-13 10:38:01,284 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 06:38:29] 2025-10-13 10:38:04,091 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 06:38:29] 2025-10-13 10:38:19,714 | INFO     | [monitor] cgroup control has ended
[2025-10-13 06:38:29] 2025-10-13 10:38:19,884 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139862063593280)>', '<ExcThread(monitor, started 139861407278848)>']
[2025-10-13 06:38:29] 2025-10-13 10:38:24,910 | INFO     | all workflow threads have been joined
[2025-10-13 06:38:29] 2025-10-13 10:38:24,910 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 06:38:29] 2025-10-13 10:38:24,910 | INFO     | traces error code: 0
[2025-10-13 06:38:29] 2025-10-13 10:38:24,910 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 06:38:29] 2025-10-13 10:38:29,680 | INFO     | PID=3253704 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 06:38:29] 2025-10-13 10:38:29,681 | INFO     | .. there are 6 such processes running
[2025-10-13 06:38:29] 2025-10-13 10:38:29,681 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 06:38:29] 2025-10-13 10:38:29,681 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 06:38:29] 2025-10-13 10:38:29,681 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 06:38:29] 2025-10-13 10:38:29,681 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 06:38:29] 2025-10-13 10:38:29,681 | INFO     | [monitor] control thread has ended
[2025-10-13 06:38:29] 2025-10-13 10:38:29,759 [wrapper] ==== pilot stdout END ====
[2025-10-13 06:38:29] 2025-10-13 10:38:29,761 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 06:38:29] 2025-10-13 10:38:29,762 [wrapper] pilotpid: 3253704
[2025-10-13 06:38:29] 2025-10-13 10:38:29,764 [wrapper] Pilot exit status: 0
[2025-10-13 06:38:29] 2025-10-13 10:38:29,771 [wrapper] pandaids: 6841495884
[2025-10-13 06:38:29] 2025-10-13 10:38:29,832 [wrapper] cleanup supervisor_pilot 3348841 3253705
[2025-10-13 06:38:29] 2025-10-13 10:38:29,834 [wrapper] Test setup, not cleaning
[2025-10-13 06:38:29] 2025-10-13 10:38:29,836 [wrapper] apfmon messages muted
[2025-10-13 06:38:29] 2025-10-13 10:38:29,837 [wrapper] ==== wrapper stdout END ====
[2025-10-13 06:38:29] 2025-10-13 10:38:29,839 [wrapper] ==== wrapper stderr END ====
[2025-10-13 06:38:29]  *** Error codes and diagnostics ***
[2025-10-13 06:38:29]     "exeErrorCode": 0,
[2025-10-13 06:38:29]     "exeErrorDiag": "",
[2025-10-13 06:38:29]     "pilotErrorCode": 0,
[2025-10-13 06:38:29]     "pilotErrorDiag": "",
[2025-10-13 06:38:29]  *** Listing of results directory ***
[2025-10-13 06:38:29] total 408640
[2025-10-13 06:38:29] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 22:00 pilot3.tar.gz
[2025-10-13 06:38:29] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 22:45 queuedata.json
[2025-10-13 06:38:29] -rwx------. 1 boincer umatlas     36292 Oct 12 22:45 runpilot2-wrapper.sh
[2025-10-13 06:38:29] -rw-r--r--. 1 boincer umatlas       100 Oct 13 06:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 06:38:29] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 06:14 run_atlas
[2025-10-13 06:38:29] -rw-r--r--. 1 boincer umatlas       105 Oct 13 06:14 job.xml
[2025-10-13 06:38:29] -rw-r--r--. 2 boincer umatlas 220215644 Oct 13 06:14 EVNT.46676267._000607.pool.root.1
[2025-10-13 06:38:29] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 06:14 start_atlas.sh
[2025-10-13 06:38:29] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 06:14 shared
[2025-10-13 06:38:29] -rw-r--r--. 2 boincer umatlas    569685 Oct 13 06:14 input.tar.gz
[2025-10-13 06:38:29] -rw-r--r--. 1 boincer umatlas         0 Oct 13 06:14 boinc_lockfile
[2025-10-13 06:38:29] -rw-r--r--. 1 boincer umatlas      2549 Oct 13 06:14 pandaJob.out
[2025-10-13 06:38:29] -rw-------. 1 boincer umatlas    972497 Oct 13 06:14 agis_schedconf.cvmfs.json
[2025-10-13 06:38:29] -rw-------. 1 boincer umatlas   1560580 Oct 13 06:14 agis_ddmendpoints.agis.ALL.json
[2025-10-13 06:38:29] drwx------. 5 boincer umatlas      4096 Oct 13 06:14 pilot3
[2025-10-13 06:38:29] -rw-r--r--. 1 boincer umatlas      7162 Oct 13 06:29 init_data.xml
[2025-10-13 06:38:29] -rw-------. 1 boincer umatlas 193183605 Oct 13 06:37 HITS.46676269._095215.pool.root.1
[2025-10-13 06:38:29] -rw-r--r--. 1 boincer umatlas       529 Oct 13 06:37 boinc_task_state.xml
[2025-10-13 06:38:29] -rw-------. 1 boincer umatlas        95 Oct 13 06:37 pilot_heartbeat.json
[2025-10-13 06:38:29] -rw-------. 1 boincer umatlas      1027 Oct 13 06:37 memory_monitor_summary.json
[2025-10-13 06:38:29] -rw-------. 1 boincer umatlas    332434 Oct 13 06:37 log.46676269._095215.job.log.tgz.1
[2025-10-13 06:38:29] -rw-------. 1 boincer umatlas      7767 Oct 13 06:37 heartbeat.json
[2025-10-13 06:38:29] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 06:38 boinc_mmap_file
[2025-10-13 06:38:29] -rw-r--r--. 1 boincer umatlas        27 Oct 13 06:38 wrapper_checkpoint.txt
[2025-10-13 06:38:29] -rw-------. 1 boincer umatlas       822 Oct 13 06:38 pilotlog.txt
[2025-10-13 06:38:29] -rw-------. 1 boincer umatlas    245716 Oct 13 06:38 log.46676269._095215.job.log.1
[2025-10-13 06:38:29] -rw-------. 1 boincer umatlas       357 Oct 13 06:38 output.list
[2025-10-13 06:38:29] -rw-r--r--. 1 boincer umatlas       620 Oct 13 06:38 runtime_log
[2025-10-13 06:38:29] -rw-------. 1 boincer umatlas    593920 Oct 13 06:38 result.tar.gz
[2025-10-13 06:38:29] -rw-------. 1 boincer umatlas       648 Oct 13 06:38 ZWmLDmIkNS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmyZVMDmOkkW1n.diag
[2025-10-13 06:38:29] -rw-r--r--. 1 boincer umatlas      8695 Oct 13 06:38 runtime_log.err
[2025-10-13 06:38:29] -rw-r--r--. 1 boincer umatlas     21633 Oct 13 06:38 stderr.txt
[2025-10-13 06:38:29] HITS file was successfully produced:
[2025-10-13 06:38:29] -rw-------. 1 boincer umatlas 193183605 Oct 13 06:37 shared/HITS.pool.root.1
[2025-10-13 06:38:29]  *** Contents of shared directory: ***
[2025-10-13 06:38:29] total 404876
[2025-10-13 06:38:29] -rw-r--r--. 2 boincer umatlas 220215644 Oct 13 06:14 ATLAS.root_0
[2025-10-13 06:38:29] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 06:14 start_atlas.sh
[2025-10-13 06:38:29] -rw-r--r--. 2 boincer umatlas    569685 Oct 13 06:14 input.tar.gz
[2025-10-13 06:38:29] -rw-------. 1 boincer umatlas 193183605 Oct 13 06:37 HITS.pool.root.1
[2025-10-13 06:38:29] -rw-------. 1 boincer umatlas    593920 Oct 13 06:38 result.tar.gz
06:38:31 (3249974): run_atlas exited; CPU time 15134.507463
06:38:31 (3249974): called boinc_finish(0)

</stderr_txt>
]]>

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