Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
07:51:36 (516264): wrapper (7.7.26015): starting
07:51:36 (516264): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 07:51:36] Arguments: --nthreads 4
[2025-10-13 07:51:36] Threads: 4
[2025-10-13 07:51:36] Checking for CVMFS
[2025-10-13 07:51:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 07:51:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 07:51:36] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 07:51:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 07:51:36] 2.11.5.0 276960 120 62984 151660 0 188 3277332 4096000 5106 130560 0 658379 99.997 8042 4744 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-13 07:51:36] CVMFS is ok
[2025-10-13 07:51:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 07:51:36] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-13 07:51:36] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-13 07:51:36] Further information can be found at the LHC@home message board.
[2025-10-13 07:51:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 07:51:36] Checking for apptainer binary...
[2025-10-13 07:51:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 07:51:36] Running /usr/bin/apptainer --version
[2025-10-13 07:51:36] apptainer version 1.4.3
[2025-10-13 07:51:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 07:51:36] x32-linux3
[2025-10-13 07:51:36] apptainer works
[2025-10-13 07:51:36] Set ATHENA_PROC_NUMBER=4
[2025-10-13 07:51:36] Set ATHENA_CORE_NUMBER=4
[2025-10-13 07:51:36] Starting ATLAS job with PandaID=6842041518
[2025-10-13 07:51:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 09:52:02]  *** The last 200 lines of the pilot log: ***
[2025-10-13 09:52:02] 2025-10-13 13:51:22,980 | INFO     | sum of square deviations: 509440249.5
[2025-10-13 09:52:02] 2025-10-13 13:51:22,980 | INFO     | sum of deviations: 2912839212.500001
[2025-10-13 09:52:02] 2025-10-13 13:51:22,981 | INFO     | mean x: 1760359893.5
[2025-10-13 09:52:02] 2025-10-13 13:51:22,981 | INFO     | mean y: 2275289.466101695
[2025-10-13 09:52:02] 2025-10-13 13:51:22,981 | INFO     | -- intersect: -10062978351.037867
[2025-10-13 09:52:02] 2025-10-13 13:51:22,981 | INFO     | intersect: -10062978351.037867
[2025-10-13 09:52:02] 2025-10-13 13:51:22,981 | INFO     | chi2: 1.8543167630511643
[2025-10-13 09:52:02] 2025-10-13 13:51:22,981 | INFO     | sum of square deviations: 447383272.0
[2025-10-13 09:52:02] 2025-10-13 13:51:22,982 | INFO     | sum of deviations: 9646831274.999998
[2025-10-13 09:52:02] 2025-10-13 13:51:22,982 | INFO     | mean x: 1760359741.0
[2025-10-13 09:52:02] 2025-10-13 13:51:22,982 | INFO     | mean y: 2291238.017699115
[2025-10-13 09:52:02] 2025-10-13 13:51:22,982 | INFO     | -- intersect: -37955975124.54245
[2025-10-13 09:52:02] 2025-10-13 13:51:22,982 | INFO     | intersect: -37955975124.54245
[2025-10-13 09:52:02] 2025-10-13 13:51:22,982 | INFO     | chi2: 1.0963912424570856
[2025-10-13 09:52:02] 2025-10-13 13:51:22,982 | INFO     | current chi2=1.0963912424570856 (change=40.873573258700354 %)
[2025-10-13 09:52:02] 2025-10-13 13:51:22,982 | INFO     | sum of square deviations: 390582207.0
[2025-10-13 09:52:02] 2025-10-13 13:51:22,983 | INFO     | sum of deviations: 9129540630.499998
[2025-10-13 09:52:02] 2025-10-13 13:51:22,983 | INFO     | mean x: 1760359588.5
[2025-10-13 09:52:02] 2025-10-13 13:51:22,983 | INFO     | mean y: 2289848.8055555555
[2025-10-13 09:52:02] 2025-10-13 13:51:22,983 | INFO     | -- intersect: -41144680237.06168
[2025-10-13 09:52:02] 2025-10-13 13:51:22,983 | INFO     | intersect: -41144680237.06168
[2025-10-13 09:52:02] 2025-10-13 13:51:22,983 | INFO     | chi2: 1.0981590798542054
[2025-10-13 09:52:02] 2025-10-13 13:51:22,983 | INFO     | current chi2=1.0981590798542054 (change=-0.16124147372409497 %)
[2025-10-13 09:52:02] 2025-10-13 13:51:22,983 | INFO     | right removable region: 107
[2025-10-13 09:52:02] 2025-10-13 13:51:22,983 | INFO     | sum of square deviations: 447383272.0
[2025-10-13 09:52:02] 2025-10-13 13:51:22,984 | INFO     | sum of deviations: -7468902891.0
[2025-10-13 09:52:02] 2025-10-13 13:51:22,984 | INFO     | mean x: 1760360046.0
[2025-10-13 09:52:02] 2025-10-13 13:51:22,984 | INFO     | mean y: 2300045.1681415928
[2025-10-13 09:52:02] 2025-10-13 13:51:22,984 | INFO     | -- intersect: 29390878160.73589
[2025-10-13 09:52:02] 2025-10-13 13:51:22,984 | INFO     | intersect: 29390878160.73589
[2025-10-13 09:52:02] 2025-10-13 13:51:22,984 | INFO     | chi2: 0.789525267403823
[2025-10-13 09:52:02] 2025-10-13 13:51:22,984 | INFO     | current chi2=0.789525267403823 (change=57.42230868340382 %)
[2025-10-13 09:52:02] 2025-10-13 13:51:22,984 | INFO     | sum of square deviations: 390582207.0
[2025-10-13 09:52:02] 2025-10-13 13:51:22,985 | INFO     | sum of deviations: -6901221274.999999
[2025-10-13 09:52:02] 2025-10-13 13:51:22,985 | INFO     | mean x: 1760360198.5
[2025-10-13 09:52:02] 2025-10-13 13:51:22,985 | INFO     | mean y: 2298516.074074074
[2025-10-13 09:52:02] 2025-10-13 13:51:22,985 | INFO     | -- intersect: 31106212201.39825
[2025-10-13 09:52:02] 2025-10-13 13:51:22,985 | INFO     | intersect: 31106212201.39825
[2025-10-13 09:52:02] 2025-10-13 13:51:22,985 | INFO     | chi2: 0.7903962838939499
[2025-10-13 09:52:02] 2025-10-13 13:51:22,985 | INFO     | current chi2=0.7903962838939499 (change=-0.11032154714832983 %)
[2025-10-13 09:52:02] 2025-10-13 13:51:22,985 | INFO     | left removable region: 20
[2025-10-13 09:52:02] 2025-10-13 13:51:22,985 | INFO     | sum of square deviations: 204163828.0
[2025-10-13 09:52:02] 2025-10-13 13:51:22,986 | INFO     | sum of deviations: 420328247.0
[2025-10-13 09:52:02] 2025-10-13 13:51:22,986 | INFO     | mean x: 1760360168.0
[2025-10-13 09:52:02] 2025-10-13 13:51:22,986 | INFO     | mean y: 2313627.7816091953
[2025-10-13 09:52:02] 2025-10-13 13:51:22,986 | INFO     | -- intersect: -3621879309.588597
[2025-10-13 09:52:02] 2025-10-13 13:51:22,986 | INFO     | intersect: -3621879309.588597
[2025-10-13 09:52:02] 2025-10-13 13:51:22,986 | INFO     | chi2: 0.001762679116742638
[2025-10-13 09:52:02] 2025-10-13 13:51:22,986 | INFO     | -- intersect: -3621879309.588597
[2025-10-13 09:52:02] 2025-10-13 13:51:22,986 | INFO     | current memory leak: 2.06 B/s (using 87 data points, chi2=0.00)
[2025-10-13 09:52:02] 2025-10-13 13:51:22,986 | INFO     | could have reported an average CPU frequency of 3622 MHz (7 samples)
[2025-10-13 09:52:02] 2025-10-13 13:51:22,986 | INFO     | ..............................
[2025-10-13 09:52:02] 2025-10-13 13:51:22,987 | INFO     | . Timing measurements:
[2025-10-13 09:52:02] 2025-10-13 13:51:22,987 | INFO     | . get job = 0 s
[2025-10-13 09:52:02] 2025-10-13 13:51:22,987 | INFO     | . initial setup = 2 s
[2025-10-13 09:52:02] 2025-10-13 13:51:22,987 | INFO     | . payload setup = 3 s
[2025-10-13 09:52:02] 2025-10-13 13:51:22,987 | INFO     | . stage-in = 0 s
[2025-10-13 09:52:02] 2025-10-13 13:51:22,987 | INFO     | . payload execution = 7147 s
[2025-10-13 09:52:02] 2025-10-13 13:51:22,987 | INFO     | . stage-out = 0 s
[2025-10-13 09:52:02] 2025-10-13 13:51:22,987 | INFO     | . log creation = 0 s
[2025-10-13 09:52:02] 2025-10-13 13:51:22,987 | INFO     | ..............................
[2025-10-13 09:52:02] 2025-10-13 13:51:23,261 | INFO     | 
[2025-10-13 09:52:02] 2025-10-13 13:51:23,261 | INFO     | job summary report
[2025-10-13 09:52:02] 2025-10-13 13:51:23,261 | INFO     | --------------------------------------------------
[2025-10-13 09:52:02] 2025-10-13 13:51:23,261 | INFO     | PanDA job id: 6842041518
[2025-10-13 09:52:02] 2025-10-13 13:51:23,261 | INFO     | task id: 46676269
[2025-10-13 09:52:02] 2025-10-13 13:51:23,261 | INFO     | errors: (none)
[2025-10-13 09:52:02] 2025-10-13 13:51:23,261 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 09:52:02] 2025-10-13 13:51:23,261 | INFO     | pilot state: finished 
[2025-10-13 09:52:02] 2025-10-13 13:51:23,261 | INFO     | transexitcode: 0
[2025-10-13 09:52:02] 2025-10-13 13:51:23,261 | INFO     | exeerrorcode: 0
[2025-10-13 09:52:02] 2025-10-13 13:51:23,261 | INFO     | exeerrordiag: 
[2025-10-13 09:52:02] 2025-10-13 13:51:23,261 | INFO     | exitcode: 0
[2025-10-13 09:52:02] 2025-10-13 13:51:23,261 | INFO     | exitmsg: OK
[2025-10-13 09:52:02] 2025-10-13 13:51:23,261 | INFO     | cpuconsumptiontime: 27584 s
[2025-10-13 09:52:02] 2025-10-13 13:51:23,262 | INFO     | nevents: 400
[2025-10-13 09:52:02] 2025-10-13 13:51:23,262 | INFO     | neventsw: 0
[2025-10-13 09:52:02] 2025-10-13 13:51:23,262 | INFO     | pid: 529121
[2025-10-13 09:52:02] 2025-10-13 13:51:23,262 | INFO     | pgrp: 529121
[2025-10-13 09:52:02] 2025-10-13 13:51:23,262 | INFO     | corecount: 4
[2025-10-13 09:52:02] 2025-10-13 13:51:23,262 | INFO     | event service: False
[2025-10-13 09:52:02] 2025-10-13 13:51:23,262 | INFO     | sizes: {0: 2348814, 3: 2349076, 11: 2349104, 7154: 2376464, 7155: 2385476, 7158: 2385560, 7164: 2385882}
[2025-10-13 09:52:02] 2025-10-13 13:51:23,262 | INFO     | --------------------------------------------------
[2025-10-13 09:52:02] 2025-10-13 13:51:23,262 | INFO     | 
[2025-10-13 09:52:02] 2025-10-13 13:51:23,262 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/3
[2025-10-13 09:52:02] 2025-10-13 13:51:23,279 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 09:52:02] 2025-10-13 13:51:23,279 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 09:52:02] 2025-10-13 13:51:23,279 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 09:52:02] 2025-10-13 13:51:23,279 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 09:52:02] 2025-10-13 13:51:23,279 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 09:52:02] 2025-10-13 13:51:23,280 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 09:52:02] 2025-10-13 13:51:23,280 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 09:52:02] 2025-10-13 13:51:23,280 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 09:52:02] 2025-10-13 13:51:23,280 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 09:52:02] 2025-10-13 13:51:23,280 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 09:52:02] 2025-10-13 13:51:23,280 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 09:52:02] 2025-10-13 13:51:23,280 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 09:52:02] 2025-10-13 13:51:23,280 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 09:52:02] 2025-10-13 13:51:23,280 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 09:52:02] 2025-10-13 13:51:23,280 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 09:52:02] 2025-10-13 13:51:23,280 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 09:52:02] 2025-10-13 13:51:23,280 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 09:52:02] 2025-10-13 13:51:23,280 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 09:52:02] 2025-10-13 13:51:23,280 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 09:52:02] 2025-10-13 13:51:23,280 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 09:52:02] 2025-10-13 13:51:23,281 | INFO     | job 6842041518 has completed (purged errors)
[2025-10-13 09:52:02] 2025-10-13 13:51:23,281 | INFO     | overall cleanup function is called
[2025-10-13 09:52:02] 2025-10-13 13:51:24,288 | INFO     | --- collectZombieJob: --- 10, [529121]
[2025-10-13 09:52:02] 2025-10-13 13:51:24,288 | INFO     | zombie collector waiting for pid 529121
[2025-10-13 09:52:02] 2025-10-13 13:51:24,288 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 09:52:02] 2025-10-13 13:51:24,288 | INFO     | collected zombie processes
[2025-10-13 09:52:02] 2025-10-13 13:51:24,288 | INFO     | will attempt to kill all subprocesses of pid=529121
[2025-10-13 09:52:02] 2025-10-13 13:51:24,413 | INFO     | process IDs to be killed: [529121] (in reverse order)
[2025-10-13 09:52:02] 2025-10-13 13:51:24,464 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 09:52:02] 2025-10-13 13:51:24,465 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 09:52:02] 2025-10-13 13:51:24,469 | INFO     | did not find any defunct processes belonging to 529121
[2025-10-13 09:52:02] 2025-10-13 13:51:24,472 | INFO     | did not find any defunct processes belonging to 529121
[2025-10-13 09:52:02] 2025-10-13 13:51:24,472 | INFO     | ready for new job
[2025-10-13 09:52:02] 2025-10-13 13:51:24,473 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 09:52:02] 2025-10-13 13:51:24,474 | INFO     | ***************************************
[2025-10-13 09:52:02] 2025-10-13 13:51:24,474 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 09:52:02] 2025-10-13 13:51:24,474 | INFO     | ***************************************
[2025-10-13 09:52:02] 2025-10-13 13:51:24,474 | INFO     | 
[2025-10-13 09:52:02] 2025-10-13 13:51:24,499 | INFO     | architecture information:
[2025-10-13 09:52:02] 2025-10-13 13:51:24,500 | INFO     | executing command: cat /etc/os-release
[2025-10-13 09:52:02] 2025-10-13 13:51:24,512 | INFO     | cat /etc/os-release:
[2025-10-13 09:52:02] NAME="CentOS Linux"
[2025-10-13 09:52:02] VERSION="7 (Core)"
[2025-10-13 09:52:02] ID="centos"
[2025-10-13 09:52:02] ID_LIKE="rhel fedora"
[2025-10-13 09:52:02] VERSION_ID="7"
[2025-10-13 09:52:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 09:52:02] ANSI_COLOR="0;31"
[2025-10-13 09:52:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 09:52:02] HOME_URL="https://www.centos.org/"
[2025-10-13 09:52:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 09:52:02] 
[2025-10-13 09:52:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 09:52:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 09:52:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 09:52:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 09:52:02] 
[2025-10-13 09:52:02] 2025-10-13 13:51:24,513 | INFO     | ***************************************
[2025-10-13 09:52:02] 2025-10-13 13:51:25,017 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/3
[2025-10-13 09:52:02] 2025-10-13 13:51:25,030 | INFO     | sufficient remaining disk space (398255456256 B)
[2025-10-13 09:52:02] 2025-10-13 13:51:25,030 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 09:52:02] 2025-10-13 13:51:25,030 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 09:52:02] 2025-10-13 13:51:25,030 | INFO     | update_server=False
[2025-10-13 09:52:02] 2025-10-13 13:51:25,030 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 09:52:02] 2025-10-13 13:51:25,031 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 09:52:02] 2025-10-13 13:51:25,031 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 09:52:02] 2025-10-13 13:51:25,057 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 09:52:02] 2025-10-13 13:51:25,057 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 09:52:02] 2025-10-13 13:51:25,057 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 09:52:02] 2025-10-13 13:51:25,057 | INFO     | will abort loop
[2025-10-13 09:52:02] 2025-10-13 13:51:25,064 | INFO     | all data control threads have been joined
[2025-10-13 09:52:02] 2025-10-13 13:51:25,326 | INFO     | all payload control threads have been joined
[2025-10-13 09:52:02] 2025-10-13 13:51:26,033 | INFO     | [job] queue monitor thread has finished
[2025-10-13 09:52:02] 2025-10-13 13:51:26,033 | INFO     | [job] retrieve thread has finished
[2025-10-13 09:52:02] 2025-10-13 13:51:26,061 | INFO     | [job] job monitor thread has finished
[2025-10-13 09:52:02] 2025-10-13 13:51:26,065 | INFO     | [payload] failed_post thread has finished
[2025-10-13 09:52:02] 2025-10-13 13:51:26,069 | INFO     | [data] control thread has finished
[2025-10-13 09:52:02] 2025-10-13 13:51:26,109 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 09:52:02] 2025-10-13 13:51:26,329 | INFO     | [payload] control thread has finished
[2025-10-13 09:52:02] 2025-10-13 13:51:26,362 | INFO     | [data] copytool_in thread has finished
[2025-10-13 09:52:02] 2025-10-13 13:51:26,364 | INFO     | all job control threads have been joined
[2025-10-13 09:52:02] 2025-10-13 13:51:26,598 | INFO     | [payload] validate_post thread has finished
[2025-10-13 09:52:02] 2025-10-13 13:51:26,877 | INFO     | [job] validate thread has finished
[2025-10-13 09:52:02] 2025-10-13 13:51:27,036 | INFO     | [data] copytool_out thread has finished
[2025-10-13 09:52:02] 2025-10-13 13:51:27,106 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 09:52:02] 2025-10-13 13:51:27,312 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 09:52:02] 2025-10-13 13:51:27,369 | INFO     | [job] control thread has finished
[2025-10-13 09:52:02] 2025-10-13 13:51:27,499 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 09:52:02] 2025-10-13 13:51:31,317 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 09:52:02] 2025-10-13 13:51:35,542 | INFO     | job.realtimelogging is not enabled
[2025-10-13 09:52:02] 2025-10-13 13:51:36,545 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 09:52:02] 2025-10-13 13:51:44,072 [wrapper] supervise_pilot (15 min periods counter: 9)
[2025-10-13 09:52:02] 2025-10-13 13:51:55,210 | INFO     | PID=520209 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 09:52:02] 2025-10-13 13:51:55,210 | INFO     | .. there are 7 such processes running
[2025-10-13 09:52:02] 2025-10-13 13:51:55,211 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 09:52:02] 2025-10-13 13:51:55,211 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 09:52:02] 2025-10-13 13:51:55,211 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 09:52:02] 2025-10-13 13:51:56,169 | INFO     | [monitor] cgroup control has ended
[2025-10-13 09:52:02] 2025-10-13 13:51:56,881 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140524442920768)>', '<ExcThread(monitor, started 140523251681024)>']
[2025-10-13 09:52:02] 2025-10-13 13:51:57,221 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 09:52:02] 2025-10-13 13:51:57,221 | INFO     | [monitor] control thread has ended
[2025-10-13 09:52:02] 2025-10-13 13:52:01,906 | INFO     | all workflow threads have been joined
[2025-10-13 09:52:02] 2025-10-13 13:52:01,906 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 09:52:02] 2025-10-13 13:52:01,906 | INFO     | traces error code: 0
[2025-10-13 09:52:02] 2025-10-13 13:52:01,906 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 09:52:02] 2025-10-13 13:52:01,983 [wrapper] ==== pilot stdout END ====
[2025-10-13 09:52:02] 2025-10-13 13:52:01,985 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 09:52:02] 2025-10-13 13:52:01,987 [wrapper] pilotpid: 520209
[2025-10-13 09:52:02] 2025-10-13 13:52:01,989 [wrapper] Pilot exit status: 0
[2025-10-13 09:52:02] 2025-10-13 13:52:01,996 [wrapper] pandaids: 6842041518
[2025-10-13 09:52:02] 2025-10-13 13:52:02,028 [wrapper] cleanup supervisor_pilot  708854 520210
[2025-10-13 09:52:02] 2025-10-13 13:52:02,030 [wrapper] Test setup, not cleaning
[2025-10-13 09:52:02] 2025-10-13 13:52:02,032 [wrapper] apfmon messages muted
[2025-10-13 09:52:02] 2025-10-13 13:52:02,035 [wrapper] ==== wrapper stdout END ====
[2025-10-13 09:52:02] 2025-10-13 13:52:02,037 [wrapper] ==== wrapper stderr END ====
[2025-10-13 09:52:02]  *** Error codes and diagnostics ***
[2025-10-13 09:52:02]     "exeErrorCode": 0,
[2025-10-13 09:52:02]     "exeErrorDiag": "",
[2025-10-13 09:52:02]     "pilotErrorCode": 0,
[2025-10-13 09:52:02]     "pilotErrorDiag": "",
[2025-10-13 09:52:02]  *** Listing of results directory ***
[2025-10-13 09:52:02] total 410084
[2025-10-13 09:52:02] -rw-r--r-- 1 boinc boinc    557409 Oct 12 23:15 pilot3.tar.gz
[2025-10-13 09:52:02] -rw-r--r-- 1 boinc boinc      5112 Oct 12 23:20 queuedata.json
[2025-10-13 09:52:02] -rwx------ 1 boinc boinc     36292 Oct 12 23:21 runpilot2-wrapper.sh
[2025-10-13 09:52:02] -rw-r--r-- 1 boinc boinc       100 Oct 13 07:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 09:52:02] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 07:51 run_atlas
[2025-10-13 09:52:02] -rw-r--r-- 1 boinc boinc       105 Oct 13 07:51 job.xml
[2025-10-13 09:52:02] -rw-r--r-- 2 boinc boinc 222102540 Oct 13 07:51 EVNT.46676267._002585.pool.root.1
[2025-10-13 09:52:02] -rw-r--r-- 2 boinc boinc     15120 Oct 13 07:51 start_atlas.sh
[2025-10-13 09:52:02] drwxrwx--x 2 boinc boinc      4096 Oct 13 07:51 shared
[2025-10-13 09:52:02] -rw-r--r-- 2 boinc boinc    569686 Oct 13 07:51 input.tar.gz
[2025-10-13 09:52:02] -rw-r--r-- 1 boinc boinc      9157 Oct 13 07:51 init_data.xml
[2025-10-13 09:52:02] -rw-r--r-- 1 boinc boinc         0 Oct 13 07:51 boinc_setup_complete
[2025-10-13 09:52:02] -rw-r--r-- 1 boinc boinc         0 Oct 13 07:51 boinc_lockfile
[2025-10-13 09:52:02] -rw-r--r-- 1 boinc boinc      2550 Oct 13 07:51 pandaJob.out
[2025-10-13 09:52:02] -rw------- 1 boinc boinc    972497 Oct 13 07:51 agis_schedconf.cvmfs.json
[2025-10-13 09:52:02] -rw------- 1 boinc boinc   1560580 Oct 13 07:51 agis_ddmendpoints.agis.ALL.json
[2025-10-13 09:52:02] drwx------ 5 boinc boinc      4096 Oct 13 07:51 pilot3
[2025-10-13 09:52:02] -rw-r--r-- 1 boinc boinc       530 Oct 13 09:50 boinc_task_state.xml
[2025-10-13 09:52:02] -rw------- 1 boinc boinc 191232494 Oct 13 09:50 HITS.46676269._095744.pool.root.1
[2025-10-13 09:52:02] -rw------- 1 boinc boinc      1034 Oct 13 09:51 memory_monitor_summary.json
[2025-10-13 09:52:02] -rw------- 1 boinc boinc    306126 Oct 13 09:51 log.46676269._095744.job.log.tgz.1
[2025-10-13 09:52:02] -rw------- 1 boinc boinc      7737 Oct 13 09:51 heartbeat.json
[2025-10-13 09:52:02] -rw------- 1 boinc boinc        95 Oct 13 09:51 pilot_heartbeat.json
[2025-10-13 09:52:02] -rw-r--r-- 1 boinc boinc      8192 Oct 13 09:52 boinc_mmap_file
[2025-10-13 09:52:02] -rw-r--r-- 1 boinc boinc        27 Oct 13 09:52 wrapper_checkpoint.txt
[2025-10-13 09:52:02] -rw------- 1 boinc boinc      5088 Oct 13 09:52 pilotlog.txt
[2025-10-13 09:52:02] -rw------- 1 boinc boinc   1034821 Oct 13 09:52 log.46676269._095744.job.log.1
[2025-10-13 09:52:02] -rw------- 1 boinc boinc       357 Oct 13 09:52 output.list
[2025-10-13 09:52:02] -rw-r--r-- 1 boinc boinc       620 Oct 13 09:52 runtime_log
[2025-10-13 09:52:02] -rw------- 1 boinc boinc   1361920 Oct 13 09:52 result.tar.gz
[2025-10-13 09:52:02] -rw-r--r-- 1 boinc boinc      8764 Oct 13 09:52 runtime_log.err
[2025-10-13 09:52:02] -rw------- 1 boinc boinc       644 Oct 13 09:52 JJ5KDmyIOS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmbcVMDmjVB3hm.diag
[2025-10-13 09:52:02] -rw-r--r-- 1 boinc boinc     20970 Oct 13 09:52 stderr.txt
[2025-10-13 09:52:02] HITS file was successfully produced:
[2025-10-13 09:52:02] -rw------- 1 boinc boinc 191232494 Oct 13 09:50 shared/HITS.pool.root.1
[2025-10-13 09:52:02]  *** Contents of shared directory: ***
[2025-10-13 09:52:02] total 405568
[2025-10-13 09:52:02] -rw-r--r-- 2 boinc boinc 222102540 Oct 13 07:51 ATLAS.root_0
[2025-10-13 09:52:02] -rw-r--r-- 2 boinc boinc     15120 Oct 13 07:51 start_atlas.sh
[2025-10-13 09:52:02] -rw-r--r-- 2 boinc boinc    569686 Oct 13 07:51 input.tar.gz
[2025-10-13 09:52:02] -rw------- 1 boinc boinc 191232494 Oct 13 09:50 HITS.pool.root.1
[2025-10-13 09:52:02] -rw------- 1 boinc boinc   1361920 Oct 13 09:52 result.tar.gz
09:52:03 (516264): run_atlas exited; CPU time 27675.076063
09:52:03 (516264): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN