Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
05:52:05 (307591): wrapper (7.7.26015): starting
05:52:05 (307591): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 05:52:05] Arguments: --nthreads 4
[2025-10-13 05:52:05] Threads: 4
[2025-10-13 05:52:05] Checking for CVMFS
[2025-10-13 05:52:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 05:52:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 05:52:05] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 05:52:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 05:52:05] 2.11.5.0 276960 0 37748 151656 3 79 3249078 4096001 382 130560 0 76886 99.979 2786 3410 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-13 05:52:05] CVMFS is ok
[2025-10-13 05:52:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 05:52:05] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-13 05:52:05] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-13 05:52:05] Further information can be found at the LHC@home message board.
[2025-10-13 05:52:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 05:52:05] Checking for apptainer binary...
[2025-10-13 05:52:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 05:52:05] Running /usr/bin/apptainer --version
[2025-10-13 05:52:05] apptainer version 1.4.3
[2025-10-13 05:52:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 05:52:05] x32-linux3
[2025-10-13 05:52:05] apptainer works
[2025-10-13 05:52:05] Set ATHENA_PROC_NUMBER=4
[2025-10-13 05:52:05] Set ATHENA_CORE_NUMBER=4
[2025-10-13 05:52:05] Starting ATLAS job with PandaID=6842276499
[2025-10-13 05:52:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 07:52:31]  *** The last 200 lines of the pilot log: ***
[2025-10-13 07:52:31] 2025-10-13 11:51:51,295 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 07:52:31] 2025-10-13 11:51:51,296 | INFO     | fitting pss+swap vs Time
[2025-10-13 07:52:31] 2025-10-13 11:51:51,296 | INFO     | sum of square deviations: 509440249.5
[2025-10-13 07:52:31] 2025-10-13 11:51:51,297 | INFO     | sum of deviations: 2561095492.0
[2025-10-13 07:52:31] 2025-10-13 11:51:51,297 | INFO     | mean x: 1760352723.5
[2025-10-13 07:52:31] 2025-10-13 11:51:51,297 | INFO     | mean y: 2269882.0
[2025-10-13 07:52:31] 2025-10-13 11:51:51,297 | INFO     | -- intersect: -8847504804.846317
[2025-10-13 07:52:31] 2025-10-13 11:51:51,297 | INFO     | intersect: -8847504804.846317
[2025-10-13 07:52:31] 2025-10-13 11:51:51,297 | INFO     | chi2: 1.8724060478113933
[2025-10-13 07:52:31] 2025-10-13 11:51:51,297 | INFO     | sum of square deviations: 447383272.0
[2025-10-13 07:52:31] 2025-10-13 11:51:51,297 | INFO     | sum of deviations: 9503438513.999998
[2025-10-13 07:52:31] 2025-10-13 11:51:51,297 | INFO     | mean x: 1760352571.0
[2025-10-13 07:52:31] 2025-10-13 11:51:51,297 | INFO     | mean y: 2286330.6194690266
[2025-10-13 07:52:31] 2025-10-13 11:51:51,297 | INFO     | -- intersect: -37391607157.33445
[2025-10-13 07:52:31] 2025-10-13 11:51:51,297 | INFO     | intersect: -37391607157.33445
[2025-10-13 07:52:31] 2025-10-13 11:51:51,297 | INFO     | chi2: 1.0766980590499577
[2025-10-13 07:52:31] 2025-10-13 11:51:51,297 | INFO     | current chi2=1.0766980590499577 (change=42.49655087856173 %)
[2025-10-13 07:52:31] 2025-10-13 11:51:51,298 | INFO     | sum of square deviations: 390582207.0
[2025-10-13 07:52:31] 2025-10-13 11:51:51,298 | INFO     | sum of deviations: 9012552665.0
[2025-10-13 07:52:31] 2025-10-13 11:51:51,298 | INFO     | mean x: 1760352418.5
[2025-10-13 07:52:31] 2025-10-13 11:51:51,298 | INFO     | mean y: 2285012.388888889
[2025-10-13 07:52:31] 2025-10-13 11:51:51,298 | INFO     | -- intersect: -40617253195.8413
[2025-10-13 07:52:31] 2025-10-13 11:51:51,298 | INFO     | intersect: -40617253195.8413
[2025-10-13 07:52:31] 2025-10-13 11:51:51,298 | INFO     | chi2: 1.0784014756413685
[2025-10-13 07:52:31] 2025-10-13 11:51:51,298 | INFO     | current chi2=1.0784014756413685 (change=-0.15820745445698575 %)
[2025-10-13 07:52:31] 2025-10-13 11:51:51,298 | INFO     | right removable region: 107
[2025-10-13 07:52:31] 2025-10-13 11:51:51,298 | INFO     | sum of square deviations: 447383272.0
[2025-10-13 07:52:31] 2025-10-13 11:51:51,298 | INFO     | sum of deviations: -7414617282.999999
[2025-10-13 07:52:31] 2025-10-13 11:51:51,298 | INFO     | mean x: 1760352876.0
[2025-10-13 07:52:31] 2025-10-13 11:51:51,299 | INFO     | mean y: 2293656.0265486725
[2025-10-13 07:52:31] 2025-10-13 11:51:51,299 | INFO     | -- intersect: 29177150373.888714
[2025-10-13 07:52:31] 2025-10-13 11:51:51,299 | INFO     | intersect: 29177150373.888714
[2025-10-13 07:52:31] 2025-10-13 11:51:51,299 | INFO     | chi2: 0.8270510737009127
[2025-10-13 07:52:31] 2025-10-13 11:51:51,299 | INFO     | current chi2=0.8270510737009127 (change=55.82950211746906 %)
[2025-10-13 07:52:31] 2025-10-13 11:51:51,299 | INFO     | sum of square deviations: 390582207.0
[2025-10-13 07:52:31] 2025-10-13 11:51:51,299 | INFO     | sum of deviations: -6838919351.999999
[2025-10-13 07:52:31] 2025-10-13 11:51:51,299 | INFO     | mean x: 1760353028.5
[2025-10-13 07:52:31] 2025-10-13 11:51:51,299 | INFO     | mean y: 2292102.185185185
[2025-10-13 07:52:31] 2025-10-13 11:51:51,299 | INFO     | -- intersect: 30825284489.445812
[2025-10-13 07:52:31] 2025-10-13 11:51:51,299 | INFO     | intersect: 30825284489.445812
[2025-10-13 07:52:31] 2025-10-13 11:51:51,299 | INFO     | chi2: 0.8279458857993442
[2025-10-13 07:52:31] 2025-10-13 11:51:51,299 | INFO     | current chi2=0.8279458857993442 (change=-0.10819308829712676 %)
[2025-10-13 07:52:31] 2025-10-13 11:51:51,299 | INFO     | left removable region: 20
[2025-10-13 07:52:31] 2025-10-13 11:51:51,299 | INFO     | sum of square deviations: 204163828.0
[2025-10-13 07:52:31] 2025-10-13 11:51:51,300 | INFO     | sum of deviations: 636273675.9999999
[2025-10-13 07:52:31] 2025-10-13 11:51:51,300 | INFO     | mean x: 1760352998.0
[2025-10-13 07:52:31] 2025-10-13 11:51:51,300 | INFO     | mean y: 2307933.827586207
[2025-10-13 07:52:31] 2025-10-13 11:51:51,300 | INFO     | -- intersect: -5483807231.955259
[2025-10-13 07:52:31] 2025-10-13 11:51:51,300 | INFO     | intersect: -5483807231.955259
[2025-10-13 07:52:31] 2025-10-13 11:51:51,300 | INFO     | chi2: 5.497132454754406e-05
[2025-10-13 07:52:31] 2025-10-13 11:51:51,300 | INFO     | -- intersect: -5483807231.955259
[2025-10-13 07:52:31] 2025-10-13 11:51:51,300 | INFO     | current memory leak: 3.12 B/s (using 87 data points, chi2=0.00)
[2025-10-13 07:52:31] 2025-10-13 11:51:51,300 | INFO     | could have reported an average CPU frequency of 3306 MHz (7 samples)
[2025-10-13 07:52:31] 2025-10-13 11:51:51,300 | INFO     | ..............................
[2025-10-13 07:52:31] 2025-10-13 11:51:51,300 | INFO     | . Timing measurements:
[2025-10-13 07:52:31] 2025-10-13 11:51:51,300 | INFO     | . get job = 0 s
[2025-10-13 07:52:31] 2025-10-13 11:51:51,300 | INFO     | . initial setup = 2 s
[2025-10-13 07:52:31] 2025-10-13 11:51:51,300 | INFO     | . payload setup = 3 s
[2025-10-13 07:52:31] 2025-10-13 11:51:51,300 | INFO     | . stage-in = 0 s
[2025-10-13 07:52:31] 2025-10-13 11:51:51,300 | INFO     | . payload execution = 7150 s
[2025-10-13 07:52:31] 2025-10-13 11:51:51,300 | INFO     | . stage-out = 0 s
[2025-10-13 07:52:31] 2025-10-13 11:51:51,300 | INFO     | . log creation = 0 s
[2025-10-13 07:52:31] 2025-10-13 11:51:51,301 | INFO     | ..............................
[2025-10-13 07:52:31] 2025-10-13 11:51:51,657 | INFO     | 
[2025-10-13 07:52:31] 2025-10-13 11:51:51,657 | INFO     | job summary report
[2025-10-13 07:52:31] 2025-10-13 11:51:51,657 | INFO     | --------------------------------------------------
[2025-10-13 07:52:31] 2025-10-13 11:51:51,657 | INFO     | PanDA job id: 6842276499
[2025-10-13 07:52:31] 2025-10-13 11:51:51,657 | INFO     | task id: 46676269
[2025-10-13 07:52:31] 2025-10-13 11:51:51,657 | INFO     | errors: (none)
[2025-10-13 07:52:31] 2025-10-13 11:51:51,657 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 07:52:31] 2025-10-13 11:51:51,657 | INFO     | pilot state: finished 
[2025-10-13 07:52:31] 2025-10-13 11:51:51,657 | INFO     | transexitcode: 0
[2025-10-13 07:52:31] 2025-10-13 11:51:51,657 | INFO     | exeerrorcode: 0
[2025-10-13 07:52:31] 2025-10-13 11:51:51,657 | INFO     | exeerrordiag: 
[2025-10-13 07:52:31] 2025-10-13 11:51:51,657 | INFO     | exitcode: 0
[2025-10-13 07:52:31] 2025-10-13 11:51:51,657 | INFO     | exitmsg: OK
[2025-10-13 07:52:31] 2025-10-13 11:51:51,658 | INFO     | cpuconsumptiontime: 27834 s
[2025-10-13 07:52:31] 2025-10-13 11:51:51,658 | INFO     | nevents: 400
[2025-10-13 07:52:31] 2025-10-13 11:51:51,658 | INFO     | neventsw: 0
[2025-10-13 07:52:31] 2025-10-13 11:51:51,658 | INFO     | pid: 372370
[2025-10-13 07:52:31] 2025-10-13 11:51:51,658 | INFO     | pgrp: 372370
[2025-10-13 07:52:31] 2025-10-13 11:51:51,658 | INFO     | corecount: 4
[2025-10-13 07:52:31] 2025-10-13 11:51:51,658 | INFO     | event service: False
[2025-10-13 07:52:31] 2025-10-13 11:51:51,658 | INFO     | sizes: {0: 2348637, 1: 2348836, 4: 2349098, 11: 2349126, 7158: 2376483, 7159: 2385495, 7160: 2385679, 7164: 2385873}
[2025-10-13 07:52:31] 2025-10-13 11:51:51,658 | INFO     | --------------------------------------------------
[2025-10-13 07:52:31] 2025-10-13 11:51:51,658 | INFO     | 
[2025-10-13 07:52:31] 2025-10-13 11:51:51,658 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/4
[2025-10-13 07:52:31] 2025-10-13 11:51:51,673 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 07:52:31] 2025-10-13 11:51:51,673 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 07:52:31] 2025-10-13 11:51:51,673 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 07:52:31] 2025-10-13 11:51:51,673 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 07:52:31] 2025-10-13 11:51:51,673 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 07:52:31] 2025-10-13 11:51:51,673 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 07:52:31] 2025-10-13 11:51:51,673 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 07:52:31] 2025-10-13 11:51:51,673 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 07:52:31] 2025-10-13 11:51:51,673 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 07:52:31] 2025-10-13 11:51:51,674 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 07:52:31] 2025-10-13 11:51:51,674 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 07:52:31] 2025-10-13 11:51:51,674 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 07:52:31] 2025-10-13 11:51:51,674 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 07:52:31] 2025-10-13 11:51:51,674 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 07:52:31] 2025-10-13 11:51:51,674 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 07:52:31] 2025-10-13 11:51:51,674 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 07:52:31] 2025-10-13 11:51:51,674 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 07:52:31] 2025-10-13 11:51:51,674 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 07:52:31] 2025-10-13 11:51:51,674 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 07:52:31] 2025-10-13 11:51:51,674 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 07:52:31] 2025-10-13 11:51:51,674 | INFO     | job 6842276499 has completed (purged errors)
[2025-10-13 07:52:31] 2025-10-13 11:51:51,674 | INFO     | overall cleanup function is called
[2025-10-13 07:52:31] 2025-10-13 11:51:52,681 | INFO     | --- collectZombieJob: --- 10, [372370]
[2025-10-13 07:52:31] 2025-10-13 11:51:52,681 | INFO     | zombie collector waiting for pid 372370
[2025-10-13 07:52:31] 2025-10-13 11:51:52,681 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 07:52:31] 2025-10-13 11:51:52,681 | INFO     | collected zombie processes
[2025-10-13 07:52:31] 2025-10-13 11:51:52,681 | INFO     | will attempt to kill all subprocesses of pid=372370
[2025-10-13 07:52:31] 2025-10-13 11:51:52,777 | INFO     | process IDs to be killed: [372370] (in reverse order)
[2025-10-13 07:52:31] 2025-10-13 11:51:52,824 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 07:52:31] 2025-10-13 11:51:52,824 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 07:52:31] 2025-10-13 11:51:52,829 | INFO     | did not find any defunct processes belonging to 372370
[2025-10-13 07:52:31] 2025-10-13 11:51:52,834 | INFO     | did not find any defunct processes belonging to 372370
[2025-10-13 07:52:31] 2025-10-13 11:51:52,834 | INFO     | ready for new job
[2025-10-13 07:52:31] 2025-10-13 11:51:52,834 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 07:52:31] 2025-10-13 11:51:52,835 | INFO     | ***************************************
[2025-10-13 07:52:31] 2025-10-13 11:51:52,835 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 07:52:31] 2025-10-13 11:51:52,835 | INFO     | ***************************************
[2025-10-13 07:52:31] 2025-10-13 11:51:52,835 | INFO     | 
[2025-10-13 07:52:31] 2025-10-13 11:51:52,855 | INFO     | architecture information:
[2025-10-13 07:52:31] 2025-10-13 11:51:52,855 | INFO     | executing command: cat /etc/os-release
[2025-10-13 07:52:31] 2025-10-13 11:51:52,867 | INFO     | cat /etc/os-release:
[2025-10-13 07:52:31] NAME="CentOS Linux"
[2025-10-13 07:52:31] VERSION="7 (Core)"
[2025-10-13 07:52:31] ID="centos"
[2025-10-13 07:52:31] ID_LIKE="rhel fedora"
[2025-10-13 07:52:31] VERSION_ID="7"
[2025-10-13 07:52:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 07:52:31] ANSI_COLOR="0;31"
[2025-10-13 07:52:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 07:52:31] HOME_URL="https://www.centos.org/"
[2025-10-13 07:52:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 07:52:31] 
[2025-10-13 07:52:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 07:52:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 07:52:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 07:52:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 07:52:31] 
[2025-10-13 07:52:31] 2025-10-13 11:51:52,867 | INFO     | ***************************************
[2025-10-13 07:52:31] 2025-10-13 11:51:53,370 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/4
[2025-10-13 07:52:31] 2025-10-13 11:51:53,383 | INFO     | sufficient remaining disk space (396470779904 B)
[2025-10-13 07:52:31] 2025-10-13 11:51:53,383 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 07:52:31] 2025-10-13 11:51:53,383 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 07:52:31] 2025-10-13 11:51:53,383 | INFO     | update_server=False
[2025-10-13 07:52:31] 2025-10-13 11:51:53,383 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 07:52:31] 2025-10-13 11:51:53,384 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 07:52:31] 2025-10-13 11:51:53,564 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 07:52:31] 2025-10-13 11:51:53,779 | INFO     | all job control threads have been joined
[2025-10-13 07:52:31] 2025-10-13 11:51:54,365 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:52:31] 2025-10-13 11:51:54,365 | INFO     | aborting loop
[2025-10-13 07:52:31] 2025-10-13 11:51:54,378 | INFO     | all data control threads have been joined
[2025-10-13 07:52:31] 2025-10-13 11:51:54,389 | INFO     | [job] retrieve thread has finished
[2025-10-13 07:52:31] 2025-10-13 11:51:54,509 | INFO     | [job] validate thread has finished
[2025-10-13 07:52:31] 2025-10-13 11:51:54,741 | INFO     | [payload] validate_post thread has finished
[2025-10-13 07:52:31] 2025-10-13 11:51:54,781 | INFO     | [job] control thread has finished
[2025-10-13 07:52:31] 2025-10-13 11:51:54,792 | INFO     | all payload control threads have been joined
[2025-10-13 07:52:31] 2025-10-13 11:51:54,864 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 07:52:31] 2025-10-13 11:51:54,895 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 07:52:31] 2025-10-13 11:51:55,197 | INFO     | [payload] failed_post thread has finished
[2025-10-13 07:52:31] 2025-10-13 11:51:55,369 | INFO     | [job] job monitor thread has finished
[2025-10-13 07:52:31] 2025-10-13 11:51:55,384 | INFO     | [data] control thread has finished
[2025-10-13 07:52:31] 2025-10-13 11:51:55,389 | INFO     | [data] copytool_out thread has finished
[2025-10-13 07:52:31] 2025-10-13 11:51:55,597 | INFO     | [data] copytool_in thread has finished
[2025-10-13 07:52:31] 2025-10-13 11:51:55,701 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 07:52:31] 2025-10-13 11:51:55,797 | INFO     | [payload] control thread has finished
[2025-10-13 07:52:31] 2025-10-13 11:51:56,349 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:52:31] 2025-10-13 11:51:57,353 | INFO     | [job] queue monitor thread has finished
[2025-10-13 07:52:31] 2025-10-13 11:51:57,569 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 07:52:31] 2025-10-13 11:52:04,077 | INFO     | job.realtimelogging is not enabled
[2025-10-13 07:52:31] 2025-10-13 11:52:05,081 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 07:52:31] 2025-10-13 11:52:12,968 [wrapper] supervise_pilot (15 min periods counter: 9)
[2025-10-13 07:52:31] 2025-10-13 11:52:23,649 | INFO     | PID=328787 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 07:52:31] 2025-10-13 11:52:23,649 | INFO     | .. there are 8 such processes running
[2025-10-13 07:52:31] 2025-10-13 11:52:23,649 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 07:52:31] 2025-10-13 11:52:23,650 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 07:52:31] 2025-10-13 11:52:23,650 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 07:52:31] 2025-10-13 11:52:25,646 | INFO     | [monitor] cgroup control has ended
[2025-10-13 07:52:31] 2025-10-13 11:52:26,311 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140246086776640)>', '<ExcThread(monitor, started 140245504878336)>']
[2025-10-13 07:52:31] 2025-10-13 11:52:26,661 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 07:52:31] 2025-10-13 11:52:26,661 | INFO     | [monitor] control thread has ended
[2025-10-13 07:52:31] 2025-10-13 11:52:31,333 | INFO     | all workflow threads have been joined
[2025-10-13 07:52:31] 2025-10-13 11:52:31,333 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 07:52:31] 2025-10-13 11:52:31,333 | INFO     | traces error code: 0
[2025-10-13 07:52:31] 2025-10-13 11:52:31,333 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 07:52:31] 2025-10-13 11:52:31,396 [wrapper] ==== pilot stdout END ====
[2025-10-13 07:52:31] 2025-10-13 11:52:31,398 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 07:52:31] 2025-10-13 11:52:31,401 [wrapper] pilotpid: 328787
[2025-10-13 07:52:31] 2025-10-13 11:52:31,403 [wrapper] Pilot exit status: 0
[2025-10-13 07:52:31] 2025-10-13 11:52:31,411 [wrapper] pandaids: 6842276499
[2025-10-13 07:52:31] 2025-10-13 11:52:31,442 [wrapper] cleanup supervisor_pilot  539960 328788
[2025-10-13 07:52:31] 2025-10-13 11:52:31,444 [wrapper] Test setup, not cleaning
[2025-10-13 07:52:31] 2025-10-13 11:52:31,446 [wrapper] apfmon messages muted
[2025-10-13 07:52:31] 2025-10-13 11:52:31,448 [wrapper] ==== wrapper stdout END ====
[2025-10-13 07:52:31] 2025-10-13 11:52:31,450 [wrapper] ==== wrapper stderr END ====
[2025-10-13 07:52:31]  *** Error codes and diagnostics ***
[2025-10-13 07:52:31]     "exeErrorCode": 0,
[2025-10-13 07:52:31]     "exeErrorDiag": "",
[2025-10-13 07:52:31]     "pilotErrorCode": 0,
[2025-10-13 07:52:31]     "pilotErrorDiag": "",
[2025-10-13 07:52:31]  *** Listing of results directory ***
[2025-10-13 07:52:31] total 412800
[2025-10-13 07:52:31] -rw-r--r-- 1 boinc boinc    557409 Oct 12 23:15 pilot3.tar.gz
[2025-10-13 07:52:31] -rw-r--r-- 1 boinc boinc      5112 Oct 12 23:38 queuedata.json
[2025-10-13 07:52:31] -rwx------ 1 boinc boinc     36292 Oct 12 23:39 runpilot2-wrapper.sh
[2025-10-13 07:52:31] -rw-r--r-- 1 boinc boinc       100 Oct 13 05:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 07:52:31] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 05:52 run_atlas
[2025-10-13 07:52:31] -rw-r--r-- 1 boinc boinc       105 Oct 13 05:52 job.xml
[2025-10-13 07:52:31] -rw-r--r-- 2 boinc boinc     15120 Oct 13 05:52 start_atlas.sh
[2025-10-13 07:52:31] drwxrwx--x 2 boinc boinc      4096 Oct 13 05:52 shared
[2025-10-13 07:52:31] -rw-r--r-- 2 boinc boinc    569684 Oct 13 05:52 input.tar.gz
[2025-10-13 07:52:31] -rw-r--r-- 1 boinc boinc      9157 Oct 13 05:52 init_data.xml
[2025-10-13 07:52:31] -rw-r--r-- 2 boinc boinc 223938670 Oct 13 05:52 EVNT.46676267._002549.pool.root.1
[2025-10-13 07:52:31] -rw-r--r-- 1 boinc boinc         0 Oct 13 05:52 boinc_setup_complete
[2025-10-13 07:52:31] -rw-r--r-- 1 boinc boinc         0 Oct 13 05:52 boinc_lockfile
[2025-10-13 07:52:31] -rw-r--r-- 1 boinc boinc      2547 Oct 13 05:52 pandaJob.out
[2025-10-13 07:52:31] -rw------- 1 boinc boinc    972849 Oct 13 05:52 agis_schedconf.cvmfs.json
[2025-10-13 07:52:31] -rw------- 1 boinc boinc   1560580 Oct 13 05:52 agis_ddmendpoints.agis.ALL.json
[2025-10-13 07:52:31] drwx------ 5 boinc boinc      4096 Oct 13 05:52 pilot3
[2025-10-13 07:52:31] -rw------- 1 boinc boinc 192233832 Oct 13 07:51 HITS.46676269._096016.pool.root.1
[2025-10-13 07:52:31] -rw-r--r-- 1 boinc boinc       529 Oct 13 07:51 boinc_task_state.xml
[2025-10-13 07:52:31] -rw------- 1 boinc boinc      1020 Oct 13 07:51 memory_monitor_summary.json
[2025-10-13 07:52:31] -rw------- 1 boinc boinc    281079 Oct 13 07:51 log.46676269._096016.job.log.tgz.1
[2025-10-13 07:52:31] -rw------- 1 boinc boinc      7735 Oct 13 07:51 heartbeat.json
[2025-10-13 07:52:31] -rw-r--r-- 1 boinc boinc      8192 Oct 13 07:52 boinc_mmap_file
[2025-10-13 07:52:31] -rw-r--r-- 1 boinc boinc        27 Oct 13 07:52 wrapper_checkpoint.txt
[2025-10-13 07:52:31] -rw------- 1 boinc boinc        95 Oct 13 07:52 pilot_heartbeat.json
[2025-10-13 07:52:31] -rw------- 1 boinc boinc      4902 Oct 13 07:52 pilotlog.txt
[2025-10-13 07:52:31] -rw------- 1 boinc boinc   1033714 Oct 13 07:52 log.46676269._096016.job.log.1
[2025-10-13 07:52:31] -rw------- 1 boinc boinc       357 Oct 13 07:52 output.list
[2025-10-13 07:52:31] -rw-r--r-- 1 boinc boinc       620 Oct 13 07:52 runtime_log
[2025-10-13 07:52:31] -rw------- 1 boinc boinc   1331200 Oct 13 07:52 result.tar.gz
[2025-10-13 07:52:31] -rw-r--r-- 1 boinc boinc      8764 Oct 13 07:52 runtime_log.err
[2025-10-13 07:52:31] -rw------- 1 boinc boinc       644 Oct 13 07:52 HCYKDmFaOS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmXfVMDmKNajfn.diag
[2025-10-13 07:52:31] -rw-r--r-- 1 boinc boinc     20926 Oct 13 07:52 stderr.txt
[2025-10-13 07:52:31] HITS file was successfully produced:
[2025-10-13 07:52:31] -rw------- 1 boinc boinc 192233832 Oct 13 07:51 shared/HITS.pool.root.1
[2025-10-13 07:52:31]  *** Contents of shared directory: ***
[2025-10-13 07:52:31] total 408308
[2025-10-13 07:52:31] -rw-r--r-- 2 boinc boinc     15120 Oct 13 05:52 start_atlas.sh
[2025-10-13 07:52:31] -rw-r--r-- 2 boinc boinc    569684 Oct 13 05:52 input.tar.gz
[2025-10-13 07:52:31] -rw-r--r-- 2 boinc boinc 223938670 Oct 13 05:52 ATLAS.root_0
[2025-10-13 07:52:31] -rw------- 1 boinc boinc 192233832 Oct 13 07:51 HITS.pool.root.1
[2025-10-13 07:52:31] -rw------- 1 boinc boinc   1331200 Oct 13 07:52 result.tar.gz
07:52:33 (307591): run_atlas exited; CPU time 27931.416546
07:52:33 (307591): called boinc_finish(0)

</stderr_txt>
]]>

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