Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
22:02:57 (758401): wrapper (7.7.26015): starting
22:02:57 (758401): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 22:02:57] Arguments: --nthreads 12
[2025-10-13 22:02:57] Threads: 12
[2025-10-13 22:02:57] Checking for CVMFS
[2025-10-13 22:02:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 22:02:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 22:02:57] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 22:02:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 22:02:57] 2.13.2.0 583017 104 48984 151674 3 188 2535583 4096001 854 130560 0 491093 99.992 5617 576 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-13 22:02:57] CVMFS is ok
[2025-10-13 22:02:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 22:02:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 22:02:57] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-13 22:02:57] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-13 22:02:57] Further information can be found at the LHC@home message board.
[2025-10-13 22:02:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 22:02:57] Checking for apptainer binary...
[2025-10-13 22:02:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 22:02:57] Running /usr/bin/apptainer --version
[2025-10-13 22:02:57] apptainer version 1.4.3
[2025-10-13 22:02:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 22:02:57] test-run
[2025-10-13 22:02:57] apptainer works
[2025-10-13 22:02:57] Set ATHENA_PROC_NUMBER=12
[2025-10-13 22:02:57] Set ATHENA_CORE_NUMBER=12
[2025-10-13 22:02:57] Starting ATLAS job with PandaID=6842448579
[2025-10-13 22:02:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 22:26:09]  *** The last 200 lines of the pilot log: ***
[2025-10-13 22:26:09]  is_altstaged=None
[2025-10-13 22:26:09]  is_tar=False
[2025-10-13 22:26:09]  lfn=log.46676269._096228.job.log.tgz.1
[2025-10-13 22:26:09]  mtime=0
[2025-10-13 22:26:09]  protocol_id=None
[2025-10-13 22:26:09]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-13 22:26:09]  replicas=None
[2025-10-13 22:26:09]  scope=mc23_13p6TeV
[2025-10-13 22:26:09]  status=None
[2025-10-13 22:26:09]  status_code=0
[2025-10-13 22:26:09]  storage_token=
[2025-10-13 22:26:09]  surl=/var/lib/boinc-client/slots/0/PanDA_Pilot-6842448579/log.46676269._096228.job.log.tgz.1
[2025-10-13 22:26:09]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/db/9f/log.46676269._096228.job.log.tgz.1
[2025-10-13 22:26:09]  workdir=None
[2025-10-13 22:26:09] ]
[2025-10-13 22:26:09] 2025-10-13 22:25:34,468 | INFO     | transferring file log.46676269._096228.job.log.tgz.1 from /var/lib/boinc-client/slots/0/PanDA_Pilot-6842448579/log.46676269._096228.job.log.tgz.1 to /var/lib/boinc
[2025-10-13 22:26:09] 2025-10-13 22:25:34,468 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/0/PanDA_Pilot-6842448579/log.46676269._096228.job.log.tgz.1 /var/lib/boinc-client/slots/0/log.466762
[2025-10-13 22:26:09] 2025-10-13 22:25:34,473 | INFO     | adding to output.list: log.46676269._096228.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/db/9f/log.46676269._096228.job.log.tg
[2025-10-13 22:26:09] 2025-10-13 22:25:34,473 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 22:26:09] 2025-10-13 22:25:34,473 | INFO     | summary of transferred files:
[2025-10-13 22:26:09] 2025-10-13 22:25:34,473 | INFO     |  -- lfn=log.46676269._096228.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 22:26:09] 2025-10-13 22:25:34,473 | INFO     | stage-out finished correctly
[2025-10-13 22:26:09] 2025-10-13 22:25:34,684 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 22:26:09] 2025-10-13 22:25:34,701 | INFO     | job 6842448579 has state=finished
[2025-10-13 22:26:09] 2025-10-13 22:25:34,701 | INFO     | preparing for final server update for job 6842448579 in state='finished'
[2025-10-13 22:26:09] 2025-10-13 22:25:34,702 | INFO     | this job has now completed (state=finished)
[2025-10-13 22:26:09] 2025-10-13 22:25:34,702 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 22:26:09] 2025-10-13 22:25:34,702 | INFO     | log transfer has been attempted: DONE
[2025-10-13 22:26:09] 2025-10-13 22:25:34,702 | INFO     | job 6842448579 has finished - writing final server update
[2025-10-13 22:26:09] 2025-10-13 22:25:34,702 | INFO     | total number of processed events: 400 (read)
[2025-10-13 22:26:09] 2025-10-13 22:25:34,702 | INFO     | executing command: lscpu
[2025-10-13 22:26:09] 2025-10-13 22:25:34,709 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 22:26:09] 2025-10-13 22:25:35,368 | INFO     | monitor loop #109: job 0:6842448579 is in state 'finished'
[2025-10-13 22:26:09] 2025-10-13 22:25:35,368 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 22:26:09] 2025-10-13 22:25:35,537 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-13 22:26:09] 2025-10-13 22:25:35,538 | INFO     | found 32 cores (32 cores per socket, 1 socket) , CPU MHz: 4299.979999999998
[2025-10-13 22:26:09] 2025-10-13 22:25:35,539 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6842448579/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 22:26:09] 2025-10-13 22:25:35,539 | INFO     | extracted standard info from prmon json
[2025-10-13 22:26:09] 2025-10-13 22:25:35,539 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 22:26:09] 2025-10-13 22:25:35,539 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 22:26:09] 2025-10-13 22:25:35,539 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 22:26:09] 2025-10-13 22:25:35,539 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 22:26:09] 2025-10-13 22:25:35,539 | INFO     | fitting pss+swap vs Time
[2025-10-13 22:26:09] 2025-10-13 22:25:35,539 | INFO     | sum of square deviations: 1041880.0
[2025-10-13 22:26:09] 2025-10-13 22:25:35,539 | INFO     | sum of deviations: 101126531.99999997
[2025-10-13 22:26:09] 2025-10-13 22:25:35,539 | INFO     | mean x: 1760393728.0
[2025-10-13 22:26:09] 2025-10-13 22:25:35,539 | INFO     | mean y: 2688175.7333333334
[2025-10-13 22:26:09] 2025-10-13 22:25:35,539 | INFO     | -- intersect: -170863930501.26523
[2025-10-13 22:26:09] 2025-10-13 22:25:35,539 | INFO     | intersect: -170863930501.26523
[2025-10-13 22:26:09] 2025-10-13 22:25:35,539 | INFO     | chi2: 0.03357855135130735
[2025-10-13 22:26:09] 2025-10-13 22:25:35,539 | INFO     | -- intersect: -170863930501.26523
[2025-10-13 22:26:09] 2025-10-13 22:25:35,539 | INFO     | current memory leak: 97.06 B/s (using 15 data points, chi2=0.03)
[2025-10-13 22:26:09] 2025-10-13 22:25:35,540 | INFO     | could have reported an average CPU frequency of 4299 MHz (4 samples)
[2025-10-13 22:26:09] 2025-10-13 22:25:35,540 | INFO     | ..............................
[2025-10-13 22:26:09] 2025-10-13 22:25:35,540 | INFO     | . Timing measurements:
[2025-10-13 22:26:09] 2025-10-13 22:25:35,540 | INFO     | . get job = 0 s
[2025-10-13 22:26:09] 2025-10-13 22:25:35,540 | INFO     | . initial setup = 2 s
[2025-10-13 22:26:09] 2025-10-13 22:25:35,540 | INFO     | . payload setup = 1 s
[2025-10-13 22:26:09] 2025-10-13 22:25:35,540 | INFO     | . stage-in = 0 s
[2025-10-13 22:26:09] 2025-10-13 22:25:35,540 | INFO     | . payload execution = 1335 s
[2025-10-13 22:26:09] 2025-10-13 22:25:35,540 | INFO     | . stage-out = 0 s
[2025-10-13 22:26:09] 2025-10-13 22:25:35,540 | INFO     | . log creation = 0 s
[2025-10-13 22:26:09] 2025-10-13 22:25:35,540 | INFO     | ..............................
[2025-10-13 22:26:09] 2025-10-13 22:25:35,629 | INFO     | 
[2025-10-13 22:26:09] 2025-10-13 22:25:35,629 | INFO     | job summary report
[2025-10-13 22:26:09] 2025-10-13 22:25:35,629 | INFO     | --------------------------------------------------
[2025-10-13 22:26:09] 2025-10-13 22:25:35,629 | INFO     | PanDA job id: 6842448579
[2025-10-13 22:26:09] 2025-10-13 22:25:35,629 | INFO     | task id: 46676269
[2025-10-13 22:26:09] 2025-10-13 22:25:35,629 | INFO     | errors: (none)
[2025-10-13 22:26:09] 2025-10-13 22:25:35,629 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 22:26:09] 2025-10-13 22:25:35,629 | INFO     | pilot state: finished 
[2025-10-13 22:26:09] 2025-10-13 22:25:35,629 | INFO     | transexitcode: 0
[2025-10-13 22:26:09] 2025-10-13 22:25:35,629 | INFO     | exeerrorcode: 0
[2025-10-13 22:26:09] 2025-10-13 22:25:35,629 | INFO     | exeerrordiag: 
[2025-10-13 22:26:09] 2025-10-13 22:25:35,629 | INFO     | exitcode: 0
[2025-10-13 22:26:09] 2025-10-13 22:25:35,629 | INFO     | exitmsg: OK
[2025-10-13 22:26:09] 2025-10-13 22:25:35,629 | INFO     | cpuconsumptiontime: 11974 s
[2025-10-13 22:26:09] 2025-10-13 22:25:35,629 | INFO     | nevents: 400
[2025-10-13 22:26:09] 2025-10-13 22:25:35,629 | INFO     | neventsw: 0
[2025-10-13 22:26:09] 2025-10-13 22:25:35,629 | INFO     | pid: 768902
[2025-10-13 22:26:09] 2025-10-13 22:25:35,629 | INFO     | pgrp: 768902
[2025-10-13 22:26:09] 2025-10-13 22:25:35,629 | INFO     | corecount: 12
[2025-10-13 22:26:09] 2025-10-13 22:25:35,629 | INFO     | event service: False
[2025-10-13 22:26:09] 2025-10-13 22:25:35,629 | INFO     | sizes: {0: 2348641, 1: 2349102, 11: 2349102, 1340: 2373842, 1341: 2382910, 1342: 2383048}
[2025-10-13 22:26:09] 2025-10-13 22:25:35,629 | INFO     | --------------------------------------------------
[2025-10-13 22:26:09] 2025-10-13 22:25:35,629 | INFO     | 
[2025-10-13 22:26:09] 2025-10-13 22:25:35,629 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-10-13 22:26:09] 2025-10-13 22:25:35,634 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 22:26:09] 2025-10-13 22:25:35,634 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 22:26:09] 2025-10-13 22:25:35,634 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 22:26:09] 2025-10-13 22:25:35,634 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 22:26:09] 2025-10-13 22:25:35,634 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 22:26:09] 2025-10-13 22:25:35,634 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 22:26:09] 2025-10-13 22:25:35,634 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 22:26:09] 2025-10-13 22:25:35,634 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 22:26:09] 2025-10-13 22:25:35,634 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 22:26:09] 2025-10-13 22:25:35,634 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 22:26:09] 2025-10-13 22:25:35,634 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 22:26:09] 2025-10-13 22:25:35,634 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 22:26:09] 2025-10-13 22:25:35,634 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 22:26:09] 2025-10-13 22:25:35,634 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 22:26:09] 2025-10-13 22:25:35,634 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 22:26:09] 2025-10-13 22:25:35,634 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 22:26:09] 2025-10-13 22:25:35,634 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 22:26:09] 2025-10-13 22:25:35,634 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 22:26:09] 2025-10-13 22:25:35,634 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 22:26:09] 2025-10-13 22:25:35,634 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 22:26:09] 2025-10-13 22:25:35,634 | INFO     | job 6842448579 has completed (purged errors)
[2025-10-13 22:26:09] 2025-10-13 22:25:35,634 | INFO     | overall cleanup function is called
[2025-10-13 22:26:09] 2025-10-13 22:25:36,640 | INFO     | --- collectZombieJob: --- 10, [768902]
[2025-10-13 22:26:09] 2025-10-13 22:25:36,640 | INFO     | zombie collector waiting for pid 768902
[2025-10-13 22:26:09] 2025-10-13 22:25:36,640 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 22:26:09] 2025-10-13 22:25:36,640 | INFO     | collected zombie processes
[2025-10-13 22:26:09] 2025-10-13 22:25:36,640 | INFO     | will attempt to kill all subprocesses of pid=768902
[2025-10-13 22:26:09] 2025-10-13 22:25:36,654 | INFO     | process IDs to be killed: [768902] (in reverse order)
[2025-10-13 22:26:09] 2025-10-13 22:25:36,664 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 22:26:09] 2025-10-13 22:25:36,664 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 22:26:09] 2025-10-13 22:25:36,665 | INFO     | did not find any defunct processes belonging to 768902
[2025-10-13 22:26:09] 2025-10-13 22:25:36,665 | INFO     | did not find any defunct processes belonging to 768902
[2025-10-13 22:26:09] 2025-10-13 22:25:36,665 | INFO     | ready for new job
[2025-10-13 22:26:09] 2025-10-13 22:25:36,665 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 22:26:09] 2025-10-13 22:25:36,666 | INFO     | ***************************************
[2025-10-13 22:26:09] 2025-10-13 22:25:36,666 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 22:26:09] 2025-10-13 22:25:36,666 | INFO     | ***************************************
[2025-10-13 22:26:09] 2025-10-13 22:25:36,666 | INFO     | 
[2025-10-13 22:26:09] 2025-10-13 22:25:36,666 | INFO     | pilot is running in a VM
[2025-10-13 22:26:09] 2025-10-13 22:25:36,666 | INFO     | architecture information:
[2025-10-13 22:26:09] 2025-10-13 22:25:36,666 | INFO     | executing command: cat /etc/os-release
[2025-10-13 22:26:09] 2025-10-13 22:25:36,668 | INFO     | cat /etc/os-release:
[2025-10-13 22:26:09] NAME="CentOS Linux"
[2025-10-13 22:26:09] VERSION="7 (Core)"
[2025-10-13 22:26:09] ID="centos"
[2025-10-13 22:26:09] ID_LIKE="rhel fedora"
[2025-10-13 22:26:09] VERSION_ID="7"
[2025-10-13 22:26:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 22:26:09] ANSI_COLOR="0;31"
[2025-10-13 22:26:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 22:26:09] HOME_URL="https://www.centos.org/"
[2025-10-13 22:26:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 22:26:09] 
[2025-10-13 22:26:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 22:26:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 22:26:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 22:26:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 22:26:09] 
[2025-10-13 22:26:09] 2025-10-13 22:25:36,669 | INFO     | ***************************************
[2025-10-13 22:26:09] 2025-10-13 22:25:37,171 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-10-13 22:26:09] 2025-10-13 22:25:37,176 | INFO     | sufficient remaining disk space (28598861824 B)
[2025-10-13 22:26:09] 2025-10-13 22:25:37,176 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 22:26:09] 2025-10-13 22:25:37,176 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 22:26:09] 2025-10-13 22:25:37,176 | INFO     | update_server=False
[2025-10-13 22:26:09] 2025-10-13 22:25:37,176 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 22:26:09] 2025-10-13 22:25:37,176 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 22:26:09] 2025-10-13 22:25:37,176 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 22:26:09] 2025-10-13 22:25:37,176 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 22:26:09] 2025-10-13 22:25:37,176 | INFO     | aborting loop
[2025-10-13 22:26:09] 2025-10-13 22:25:37,280 | INFO     | all data control threads have been joined
[2025-10-13 22:26:09] 2025-10-13 22:25:37,494 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 22:26:09] 2025-10-13 22:25:37,785 | INFO     | all payload control threads have been joined
[2025-10-13 22:26:09] 2025-10-13 22:25:38,088 | INFO     | all job control threads have been joined
[2025-10-13 22:26:09] 2025-10-13 22:25:38,181 | INFO     | [job] retrieve thread has finished
[2025-10-13 22:26:09] 2025-10-13 22:25:38,181 | INFO     | [job] queue monitor thread has finished
[2025-10-13 22:26:09] 2025-10-13 22:25:38,181 | INFO     | [job] job monitor thread has finished
[2025-10-13 22:26:09] 2025-10-13 22:25:38,223 | INFO     | [job] validate thread has finished
[2025-10-13 22:26:09] 2025-10-13 22:25:38,285 | INFO     | [data] control thread has finished
[2025-10-13 22:26:09] 2025-10-13 22:25:38,311 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 22:26:09] 2025-10-13 22:25:38,444 | INFO     | [payload] failed_post thread has finished
[2025-10-13 22:26:09] 2025-10-13 22:25:38,592 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 22:26:09] 2025-10-13 22:25:38,790 | INFO     | [payload] control thread has finished
[2025-10-13 22:26:09] 2025-10-13 22:25:39,062 | INFO     | [payload] validate_post thread has finished
[2025-10-13 22:26:09] 2025-10-13 22:25:39,093 | INFO     | [job] control thread has finished
[2025-10-13 22:26:09] 2025-10-13 22:25:39,132 | INFO     | [data] copytool_in thread has finished
[2025-10-13 22:26:09] 2025-10-13 22:25:39,499 | INFO     | [data] copytool_out thread has finished
[2025-10-13 22:26:09] 2025-10-13 22:25:39,616 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 22:26:09] 2025-10-13 22:25:39,870 | INFO     | job.realtimelogging is not enabled
[2025-10-13 22:26:09] 2025-10-13 22:25:40,876 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 22:26:09] 2025-10-13 22:25:41,181 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 22:26:09] 2025-10-13 22:26:03,199 | INFO     | [monitor] cgroup control has ended
[2025-10-13 22:26:09] 2025-10-13 22:26:04,460 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 129020521916224)>', '<ExcThread(monitor, started 129020163233536)>']
[2025-10-13 22:26:09] 2025-10-13 22:26:06,842 | INFO     | PID=762252 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 22:26:09] 2025-10-13 22:26:06,842 | INFO     | .. there are 2 such processes running
[2025-10-13 22:26:09] 2025-10-13 22:26:06,843 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 22:26:09] 2025-10-13 22:26:06,843 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 22:26:09] 2025-10-13 22:26:06,843 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 22:26:09] 2025-10-13 22:26:06,843 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 22:26:09] 2025-10-13 22:26:06,843 | INFO     | [monitor] control thread has ended
[2025-10-13 22:26:09] 2025-10-13 22:26:09,485 | INFO     | all workflow threads have been joined
[2025-10-13 22:26:09] 2025-10-13 22:26:09,485 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 22:26:09] 2025-10-13 22:26:09,485 | INFO     | traces error code: 0
[2025-10-13 22:26:09] 2025-10-13 22:26:09,485 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 22:26:09] 2025-10-13 22:26:09,520 [wrapper] ==== pilot stdout END ====
[2025-10-13 22:26:09] 2025-10-13 22:26:09,521 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 22:26:09] 2025-10-13 22:26:09,522 [wrapper] pilotpid: 762252
[2025-10-13 22:26:09] 2025-10-13 22:26:09,522 [wrapper] Pilot exit status: 0
[2025-10-13 22:26:09] 2025-10-13 22:26:09,525 [wrapper] pandaids: 6842448579
[2025-10-13 22:26:09] 2025-10-13 22:26:09,531 [wrapper] cleanup supervisor_pilot  775978 762253
[2025-10-13 22:26:09] 2025-10-13 22:26:09,532 [wrapper] Test setup, not cleaning
[2025-10-13 22:26:09] 2025-10-13 22:26:09,532 [wrapper] apfmon messages muted
[2025-10-13 22:26:09] 2025-10-13 22:26:09,533 [wrapper] ==== wrapper stdout END ====
[2025-10-13 22:26:09] 2025-10-13 22:26:09,534 [wrapper] ==== wrapper stderr END ====
[2025-10-13 22:26:09]  *** Error codes and diagnostics ***
[2025-10-13 22:26:09]     "exeErrorCode": 0,
[2025-10-13 22:26:09]     "exeErrorDiag": "",
[2025-10-13 22:26:09]     "pilotErrorCode": 0,
[2025-10-13 22:26:09]     "pilotErrorDiag": "",
[2025-10-13 22:26:09]  *** Listing of results directory ***
[2025-10-13 22:26:09] total 405796
[2025-10-13 22:26:09] -rw-r--r-- 1 boinc boinc    557409 Oct 13 03:15 pilot3.tar.gz
[2025-10-13 22:26:09] -rw-r--r-- 1 boinc boinc      5112 Oct 13 03:59 queuedata.json
[2025-10-13 22:26:09] -rwx------ 1 boinc boinc     36292 Oct 13 04:00 runpilot2-wrapper.sh
[2025-10-13 22:26:09] -rw-r--r-- 1 boinc boinc       100 Oct 13 22:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 22:26:09] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 22:02 run_atlas
[2025-10-13 22:26:09] -rw-r--r-- 1 boinc boinc       105 Oct 13 22:02 job.xml
[2025-10-13 22:26:09] -rw-r--r-- 1 boinc boinc      6938 Oct 13 22:02 init_data.xml
[2025-10-13 22:26:09] -rw-r--r-- 2 boinc boinc 218012306 Oct 13 22:02 EVNT.46676267._004449.pool.root.1
[2025-10-13 22:26:09] -rw-r--r-- 2 boinc boinc     15120 Oct 13 22:02 start_atlas.sh
[2025-10-13 22:26:09] drwxrwx--x 2 boinc boinc      4096 Oct 13 22:02 shared
[2025-10-13 22:26:09] -rw-r--r-- 2 boinc boinc    569685 Oct 13 22:02 input.tar.gz
[2025-10-13 22:26:09] -rw-r--r-- 1 boinc boinc         0 Oct 13 22:02 boinc_lockfile
[2025-10-13 22:26:09] -rw-r--r-- 1 boinc boinc      2549 Oct 13 22:02 pandaJob.out
[2025-10-13 22:26:09] -rw------- 1 boinc boinc    972791 Oct 13 22:02 agis_schedconf.cvmfs.json
[2025-10-13 22:26:09] -rw------- 1 boinc boinc   1560580 Oct 13 22:03 agis_ddmendpoints.agis.ALL.json
[2025-10-13 22:26:09] drwx------ 5 boinc boinc      4096 Oct 13 22:03 pilot3
[2025-10-13 22:26:09] -rw------- 1 boinc boinc 192489976 Oct 13 22:25 HITS.46676269._096228.pool.root.1
[2025-10-13 22:26:09] -rw-r--r-- 1 boinc boinc       529 Oct 13 22:25 boinc_task_state.xml
[2025-10-13 22:26:09] -rw------- 1 boinc boinc      1018 Oct 13 22:25 memory_monitor_summary.json
[2025-10-13 22:26:09] -rw------- 1 boinc boinc    323266 Oct 13 22:25 log.46676269._096228.job.log.tgz.1
[2025-10-13 22:26:09] -rw------- 1 boinc boinc      7730 Oct 13 22:25 heartbeat.json
[2025-10-13 22:26:09] -rw-r--r-- 1 boinc boinc      8192 Oct 13 22:26 boinc_mmap_file
[2025-10-13 22:26:09] -rw-r--r-- 1 boinc boinc        27 Oct 13 22:26 wrapper_checkpoint.txt
[2025-10-13 22:26:09] -rw------- 1 boinc boinc        95 Oct 13 22:26 pilot_heartbeat.json
[2025-10-13 22:26:09] -rw------- 1 boinc boinc      4963 Oct 13 22:26 pilotlog.txt
[2025-10-13 22:26:09] -rw------- 1 boinc boinc    243239 Oct 13 22:26 log.46676269._096228.job.log.1
[2025-10-13 22:26:09] -rw------- 1 boinc boinc       357 Oct 13 22:26 output.list
[2025-10-13 22:26:09] -rw-r--r-- 1 boinc boinc       620 Oct 13 22:26 runtime_log
[2025-10-13 22:26:09] -rw------- 1 boinc boinc    583680 Oct 13 22:26 result.tar.gz
[2025-10-13 22:26:09] -rw-r--r-- 1 boinc boinc      8762 Oct 13 22:26 runtime_log.err
[2025-10-13 22:26:09] -rw------- 1 boinc boinc       641 Oct 13 22:26 bYSNDmOuOS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmrgmNDmoJax3m.diag
[2025-10-13 22:26:09] -rw-r--r-- 1 boinc boinc     21571 Oct 13 22:26 stderr.txt
[2025-10-13 22:26:09] HITS file was successfully produced:
[2025-10-13 22:26:09] -rw------- 1 boinc boinc 192489976 Oct 13 22:25 shared/HITS.pool.root.1
[2025-10-13 22:26:09]  *** Contents of shared directory: ***
[2025-10-13 22:26:09] total 402040
[2025-10-13 22:26:09] -rw-r--r-- 2 boinc boinc 218012306 Oct 13 22:02 ATLAS.root_0
[2025-10-13 22:26:09] -rw-r--r-- 2 boinc boinc     15120 Oct 13 22:02 start_atlas.sh
[2025-10-13 22:26:09] -rw-r--r-- 2 boinc boinc    569685 Oct 13 22:02 input.tar.gz
[2025-10-13 22:26:09] -rw------- 1 boinc boinc 192489976 Oct 13 22:25 HITS.pool.root.1
[2025-10-13 22:26:09] -rw------- 1 boinc boinc    583680 Oct 13 22:26 result.tar.gz
22:26:10 (758401): run_atlas exited; CPU time 11976.768393
22:26:10 (758401): called boinc_finish(0)

</stderr_txt>
]]>

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