Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:32:05 (2266067): wrapper (7.7.26015): starting
04:32:05 (2266067): wrapper: running run_atlas (--nthreads 12)
[2025-10-14 04:32:05] Arguments: --nthreads 12
[2025-10-14 04:32:05] Threads: 12
[2025-10-14 04:32:05] Checking for CVMFS
[2025-10-14 04:32:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-14 04:32:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-14 04:32:05] Running cvmfs_config stat atlas.cern.ch
[2025-10-14 04:32:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-14 04:32:05] 2.13.2.0 9461 18115 98376 151681 0 57 7683015 46080000 922 130560 0 42366652 99.996 651012 15193 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-10-14 04:32:05] CVMFS is ok
[2025-10-14 04:32:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-14 04:32:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-14 04:32:05] Further information can be found at the LHC@home message board.
[2025-10-14 04:32:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-14 04:32:05] Checking for apptainer binary...
[2025-10-14 04:32:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-14 04:32:05] Running /usr/bin/apptainer --version
[2025-10-14 04:32:05] apptainer version 1.4.2-1.el9
[2025-10-14 04:32:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-14 04:32:05] minis01.farm.particle.cz
[2025-10-14 04:32:05] apptainer works
[2025-10-14 04:32:05] Set ATHENA_PROC_NUMBER=12
[2025-10-14 04:32:05] Set ATHENA_CORE_NUMBER=12
[2025-10-14 04:32:05] Starting ATLAS job with PandaID=6842078651
[2025-10-14 04:32:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-14 05:24:24]  *** The last 200 lines of the pilot log: ***
[2025-10-14 05:24:24]  protocol_id=None
[2025-10-14 05:24:24]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-14 05:24:24]  replicas=None
[2025-10-14 05:24:24]  scope=mc23_13p6TeV
[2025-10-14 05:24:24]  status=None
[2025-10-14 05:24:24]  status_code=0
[2025-10-14 05:24:24]  storage_token=
[2025-10-14 05:24:24]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6842078651/log.46676269._095804.job.log.tgz.1
[2025-10-14 05:24:24]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b4/61/log.46676269._095804.job.log.tgz.1
[2025-10-14 05:24:24]  workdir=None
[2025-10-14 05:24:24] ]
[2025-10-14 05:24:24] 2025-10-14 03:23:35,094 | INFO     | transferring file log.46676269._095804.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6842078651/log.46676269._095804.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-14 05:24:24] 2025-10-14 03:23:35,094 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6842078651/log.46676269._095804.job.log.tgz.1 /var/lib/boinc/slots/0/log.46676269._095804.job
[2025-10-14 05:24:24] 2025-10-14 03:23:35,111 | INFO     | adding to output.list: log.46676269._095804.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b4/61/log.46676269._095804.job.log.tg
[2025-10-14 05:24:24] 2025-10-14 03:23:35,112 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-14 05:24:24] 2025-10-14 03:23:35,112 | INFO     | summary of transferred files:
[2025-10-14 05:24:24] 2025-10-14 03:23:35,112 | INFO     |  -- lfn=log.46676269._095804.job.log.tgz.1, status_code=0, status=transferred
[2025-10-14 05:24:24] 2025-10-14 03:23:35,112 | INFO     | stage-out finished correctly
[2025-10-14 05:24:24] 2025-10-14 03:23:36,573 | INFO     | time since job start (3082s) is within the limit (172800.0s)
[2025-10-14 05:24:24] 2025-10-14 03:23:36,810 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-14 05:24:24] 2025-10-14 03:23:37,651 | INFO     | job 6842078651 has state=finished
[2025-10-14 05:24:24] 2025-10-14 03:23:37,651 | INFO     | preparing for final server update for job 6842078651 in state='finished'
[2025-10-14 05:24:24] 2025-10-14 03:23:37,652 | INFO     | this job has now completed (state=finished)
[2025-10-14 05:24:24] 2025-10-14 03:23:37,652 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-14 05:24:24] 2025-10-14 03:23:37,652 | INFO     | log transfer has been attempted: DONE
[2025-10-14 05:24:24] 2025-10-14 03:23:37,652 | INFO     | job 6842078651 has finished - writing final server update
[2025-10-14 05:24:24] 2025-10-14 03:23:37,653 | INFO     | total number of processed events: 400 (read)
[2025-10-14 05:24:24] 2025-10-14 03:23:37,654 | INFO     | executing command: lscpu
[2025-10-14 05:24:24] 2025-10-14 03:23:37,687 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-14 05:24:24] 2025-10-14 03:23:38,577 | INFO     | time since job start (3084s) is within the limit (172800.0s)
[2025-10-14 05:24:24] 2025-10-14 03:23:38,770 | WARNING  | process 2276620 can no longer be monitored (due to stat problems) - aborting
[2025-10-14 05:24:24] 2025-10-14 03:23:38,771 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6842078651/memory_monitor_summary.json (trf name=prmon)
[2025-10-14 05:24:24] 2025-10-14 03:23:38,911 | INFO     | number of running child processes to parent process 2276620: 1
[2025-10-14 05:24:24] 2025-10-14 03:23:38,911 | INFO     | maximum number of monitored processes: 6
[2025-10-14 05:24:24] 2025-10-14 03:23:40,582 | INFO     | time since job start (3086s) is within the limit (172800.0s)
[2025-10-14 05:24:24] 2025-10-14 03:23:41,351 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-14 05:24:24] 2025-10-14 03:23:41,357 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 2726.919875
[2025-10-14 05:24:24] 2025-10-14 03:23:41,364 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6842078651/memory_monitor_summary.json (trf name=prmon)
[2025-10-14 05:24:24] 2025-10-14 03:23:41,365 | INFO     | extracted standard info from prmon json
[2025-10-14 05:24:24] 2025-10-14 03:23:41,365 | INFO     | extracted standard memory fields from prmon json
[2025-10-14 05:24:24] 2025-10-14 03:23:41,365 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-14 05:24:24] 2025-10-14 03:23:41,365 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-14 05:24:24] 2025-10-14 03:23:41,365 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-14 05:24:24] 2025-10-14 03:23:41,367 | INFO     | fitting pss+swap vs Time
[2025-10-14 05:24:24] 2025-10-14 03:23:41,367 | INFO     | sum of square deviations: 26400495.0
[2025-10-14 05:24:24] 2025-10-14 03:23:41,367 | INFO     | sum of deviations: -4540182968.999999
[2025-10-14 05:24:24] 2025-10-14 03:23:41,367 | INFO     | mean x: 1760410774.5
[2025-10-14 05:24:24] 2025-10-14 03:23:41,368 | INFO     | mean y: 2976070.0454545454
[2025-10-14 05:24:24] 2025-10-14 03:23:41,368 | INFO     | -- intersect: 302746807836.41943
[2025-10-14 05:24:24] 2025-10-14 03:23:41,368 | INFO     | intersect: 302746807836.41943
[2025-10-14 05:24:24] 2025-10-14 03:23:41,368 | INFO     | chi2: 0.033796180046953075
[2025-10-14 05:24:24] 2025-10-14 03:23:41,368 | INFO     | -- intersect: 302746807836.41943
[2025-10-14 05:24:24] 2025-10-14 03:23:41,368 | INFO     | current memory leak: -171.97 B/s (using 44 data points, chi2=0.03)
[2025-10-14 05:24:24] 2025-10-14 03:23:41,369 | INFO     | could have reported an average CPU frequency of 2744 MHz (5 samples)
[2025-10-14 05:24:24] 2025-10-14 03:23:41,369 | INFO     | ..............................
[2025-10-14 05:24:24] 2025-10-14 03:23:41,369 | INFO     | . Timing measurements:
[2025-10-14 05:24:24] 2025-10-14 03:23:41,369 | INFO     | . get job = 0 s
[2025-10-14 05:24:24] 2025-10-14 03:23:41,369 | INFO     | . initial setup = 1 s
[2025-10-14 05:24:24] 2025-10-14 03:23:41,369 | INFO     | . payload setup = 5 s
[2025-10-14 05:24:24] 2025-10-14 03:23:41,369 | INFO     | . stage-in = 0 s
[2025-10-14 05:24:24] 2025-10-14 03:23:41,369 | INFO     | . payload execution = 3056 s
[2025-10-14 05:24:24] 2025-10-14 03:23:41,370 | INFO     | . stage-out = 0 s
[2025-10-14 05:24:24] 2025-10-14 03:23:41,370 | INFO     | . log creation = 0 s
[2025-10-14 05:24:24] 2025-10-14 03:23:41,370 | INFO     | ..............................
[2025-10-14 05:24:24] 2025-10-14 03:23:41,444 | INFO     | 
[2025-10-14 05:24:24] 2025-10-14 03:23:41,444 | INFO     | job summary report
[2025-10-14 05:24:24] 2025-10-14 03:23:41,445 | INFO     | --------------------------------------------------
[2025-10-14 05:24:24] 2025-10-14 03:23:41,445 | INFO     | PanDA job id: 6842078651
[2025-10-14 05:24:24] 2025-10-14 03:23:41,445 | INFO     | task id: 46676269
[2025-10-14 05:24:24] 2025-10-14 03:23:41,445 | INFO     | errors: (none)
[2025-10-14 05:24:24] 2025-10-14 03:23:41,445 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-14 05:24:24] 2025-10-14 03:23:41,445 | INFO     | pilot state: finished 
[2025-10-14 05:24:24] 2025-10-14 03:23:41,445 | INFO     | transexitcode: 0
[2025-10-14 05:24:24] 2025-10-14 03:23:41,445 | INFO     | exeerrorcode: 0
[2025-10-14 05:24:24] 2025-10-14 03:23:41,445 | INFO     | exeerrordiag: 
[2025-10-14 05:24:24] 2025-10-14 03:23:41,445 | INFO     | exitcode: 0
[2025-10-14 05:24:24] 2025-10-14 03:23:41,445 | INFO     | exitmsg: OK
[2025-10-14 05:24:24] 2025-10-14 03:23:41,445 | INFO     | cpuconsumptiontime: 33436 s
[2025-10-14 05:24:24] 2025-10-14 03:23:41,445 | INFO     | nevents: 400
[2025-10-14 05:24:24] 2025-10-14 03:23:41,446 | INFO     | neventsw: 0
[2025-10-14 05:24:24] 2025-10-14 03:23:41,446 | INFO     | pid: 2276620
[2025-10-14 05:24:24] 2025-10-14 03:23:41,446 | INFO     | pgrp: 2276620
[2025-10-14 05:24:24] 2025-10-14 03:23:41,446 | INFO     | corecount: 12
[2025-10-14 05:24:24] 2025-10-14 03:23:41,446 | INFO     | event service: False
[2025-10-14 05:24:24] 2025-10-14 03:23:41,446 | INFO     | sizes: {0: 2348630, 1: 2348829, 4: 2349091, 11: 2349119, 3065: 2374613, 3066: 2383611, 3068: 2383795, 3072: 2384021}
[2025-10-14 05:24:24] 2025-10-14 03:23:41,446 | INFO     | --------------------------------------------------
[2025-10-14 05:24:24] 2025-10-14 03:23:41,446 | INFO     | 
[2025-10-14 05:24:24] 2025-10-14 03:23:41,446 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-10-14 05:24:24] 2025-10-14 03:23:41,462 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-14 05:24:24] 2025-10-14 03:23:41,463 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-14 05:24:24] 2025-10-14 03:23:41,463 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-14 05:24:24] 2025-10-14 03:23:41,463 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-14 05:24:24] 2025-10-14 03:23:41,463 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-14 05:24:24] 2025-10-14 03:23:41,463 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-14 05:24:24] 2025-10-14 03:23:41,463 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-14 05:24:24] 2025-10-14 03:23:41,463 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-14 05:24:24] 2025-10-14 03:23:41,464 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-14 05:24:24] 2025-10-14 03:23:41,464 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-14 05:24:24] 2025-10-14 03:23:41,464 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-14 05:24:24] 2025-10-14 03:23:41,464 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-14 05:24:24] 2025-10-14 03:23:41,464 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-14 05:24:24] 2025-10-14 03:23:41,464 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-14 05:24:24] 2025-10-14 03:23:41,464 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-14 05:24:24] 2025-10-14 03:23:41,464 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-14 05:24:24] 2025-10-14 03:23:41,465 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-14 05:24:24] 2025-10-14 03:23:41,465 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-14 05:24:24] 2025-10-14 03:23:41,465 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-14 05:24:24] 2025-10-14 03:23:41,465 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-14 05:24:24] 2025-10-14 03:23:41,465 | INFO     | job 6842078651 has completed (purged errors)
[2025-10-14 05:24:24] 2025-10-14 03:23:41,465 | INFO     | overall cleanup function is called
[2025-10-14 05:24:24] 2025-10-14 03:23:42,474 | INFO     | --- collectZombieJob: --- 10, [2276620]
[2025-10-14 05:24:24] 2025-10-14 03:23:42,474 | INFO     | zombie collector waiting for pid 2276620
[2025-10-14 05:24:24] 2025-10-14 03:23:42,475 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-14 05:24:24] 2025-10-14 03:23:42,475 | INFO     | collected zombie processes
[2025-10-14 05:24:24] 2025-10-14 03:23:42,475 | INFO     | will attempt to kill all subprocesses of pid=2276620
[2025-10-14 05:24:24] 2025-10-14 03:23:42,617 | INFO     | process IDs to be killed: [2276620] (in reverse order)
[2025-10-14 05:24:24] 2025-10-14 03:23:42,667 | WARNING  | found no corresponding commands to process id(s)
[2025-10-14 05:24:24] 2025-10-14 03:23:42,667 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-14 05:24:24] 2025-10-14 03:23:42,672 | INFO     | did not find any defunct processes belonging to 2276620
[2025-10-14 05:24:24] 2025-10-14 03:23:42,676 | INFO     | did not find any defunct processes belonging to 2276620
[2025-10-14 05:24:24] 2025-10-14 03:23:42,676 | INFO     | ready for new job
[2025-10-14 05:24:24] 2025-10-14 03:23:42,676 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-14 05:24:24] 2025-10-14 03:23:42,677 | INFO     | ***************************************
[2025-10-14 05:24:24] 2025-10-14 03:23:42,678 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-14 05:24:24] 2025-10-14 03:23:42,678 | INFO     | ***************************************
[2025-10-14 05:24:24] 2025-10-14 03:23:42,678 | INFO     | 
[2025-10-14 05:24:24] 2025-10-14 03:23:42,679 | INFO     | architecture information:
[2025-10-14 05:24:24] 2025-10-14 03:23:42,680 | INFO     | executing command: cat /etc/os-release
[2025-10-14 05:24:24] 2025-10-14 03:23:42,694 | INFO     | cat /etc/os-release:
[2025-10-14 05:24:24] NAME="CentOS Linux"
[2025-10-14 05:24:24] VERSION="7 (Core)"
[2025-10-14 05:24:24] ID="centos"
[2025-10-14 05:24:24] ID_LIKE="rhel fedora"
[2025-10-14 05:24:24] VERSION_ID="7"
[2025-10-14 05:24:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-14 05:24:24] ANSI_COLOR="0;31"
[2025-10-14 05:24:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-14 05:24:24] HOME_URL="https://www.centos.org/"
[2025-10-14 05:24:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-14 05:24:24] 
[2025-10-14 05:24:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-14 05:24:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-14 05:24:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-14 05:24:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-14 05:24:24] 
[2025-10-14 05:24:24] 2025-10-14 03:23:42,694 | INFO     | ***************************************
[2025-10-14 05:24:24] 2025-10-14 03:23:43,197 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-10-14 05:24:24] 2025-10-14 03:23:43,212 | INFO     | sufficient remaining disk space (73416048640 B)
[2025-10-14 05:24:24] 2025-10-14 03:23:43,212 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-14 05:24:24] 2025-10-14 03:23:43,212 | INFO     | current server update state: UPDATING_FINAL
[2025-10-14 05:24:24] 2025-10-14 03:23:43,212 | INFO     | update_server=False
[2025-10-14 05:24:24] 2025-10-14 03:23:43,212 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-14 05:24:24] 2025-10-14 03:23:43,213 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-14 05:24:24] 2025-10-14 03:23:43,213 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-14 05:24:24] 2025-10-14 03:23:43,213 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-14 05:24:24] 2025-10-14 03:23:43,213 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-14 05:24:24] 2025-10-14 03:23:43,214 | INFO     | aborting loop
[2025-10-14 05:24:24] 2025-10-14 03:23:43,227 | INFO     | all data control threads have been joined
[2025-10-14 05:24:24] 2025-10-14 03:23:43,427 | INFO     | all job control threads have been joined
[2025-10-14 05:24:24] 2025-10-14 03:23:44,030 | INFO     | all payload control threads have been joined
[2025-10-14 05:24:24] 2025-10-14 03:23:44,218 | INFO     | [job] retrieve thread has finished
[2025-10-14 05:24:24] 2025-10-14 03:23:44,219 | INFO     | [job] queue monitor thread has finished
[2025-10-14 05:24:24] 2025-10-14 03:23:44,220 | INFO     | [job] job monitor thread has finished
[2025-10-14 05:24:24] 2025-10-14 03:23:44,233 | INFO     | [data] control thread has finished
[2025-10-14 05:24:24] 2025-10-14 03:23:44,432 | INFO     | [job] control thread has finished
[2025-10-14 05:24:24] 2025-10-14 03:23:44,547 | INFO     | [payload] failed_post thread has finished
[2025-10-14 05:24:24] 2025-10-14 03:23:44,944 | INFO     | [data] copytool_in thread has finished
[2025-10-14 05:24:24] 2025-10-14 03:23:45,035 | INFO     | [payload] control thread has finished
[2025-10-14 05:24:24] 2025-10-14 03:23:45,135 | INFO     | [payload] validate_post thread has finished
[2025-10-14 05:24:24] 2025-10-14 03:23:45,219 | INFO     | [data] copytool_out thread has finished
[2025-10-14 05:24:24] 2025-10-14 03:23:45,319 | INFO     | [job] validate thread has finished
[2025-10-14 05:24:24] 2025-10-14 03:23:45,437 | INFO     | [payload] execute_payloads thread has finished
[2025-10-14 05:24:24] 2025-10-14 03:23:45,575 | INFO     | [job] create_data_payload thread has finished
[2025-10-14 05:24:24] 2025-10-14 03:23:45,709 | INFO     | [payload] validate_pre thread has finished
[2025-10-14 05:24:24] 2025-10-14 03:23:47,219 | INFO     | [data] queue_monitor thread has finished
[2025-10-14 05:24:24] 2025-10-14 03:23:53,395 | INFO     | job.realtimelogging is not enabled
[2025-10-14 05:24:24] 2025-10-14 03:23:54,400 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-14 05:24:24] 2025-10-14 03:24:13,853 | INFO     | PID=2269938 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-14 05:24:24] 2025-10-14 03:24:13,853 | INFO     | .. there are 2 such processes running
[2025-10-14 05:24:24] 2025-10-14 03:24:13,854 | INFO     | found 0 job(s) in 20 queues
[2025-10-14 05:24:24] 2025-10-14 03:24:13,854 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-14 05:24:24] 2025-10-14 03:24:13,854 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-14 05:24:24] 2025-10-14 03:24:18,350 | INFO     | [monitor] cgroup control has ended
[2025-10-14 05:24:24] 2025-10-14 03:24:19,351 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140116866156352)>', '<ExcThread(monitor, started 140115783444224)>']
[2025-10-14 05:24:24] 2025-10-14 03:24:19,884 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-14 05:24:24] 2025-10-14 03:24:19,885 | INFO     | [monitor] control thread has ended
[2025-10-14 05:24:24] 2025-10-14 03:24:24,377 | INFO     | all workflow threads have been joined
[2025-10-14 05:24:24] 2025-10-14 03:24:24,377 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-14 05:24:24] 2025-10-14 03:24:24,377 | INFO     | traces error code: 0
[2025-10-14 05:24:24] 2025-10-14 03:24:24,377 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-14 05:24:24] 2025-10-14 03:24:24,479 [wrapper] ==== pilot stdout END ====
[2025-10-14 05:24:24] 2025-10-14 03:24:24,482 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-14 05:24:24] 2025-10-14 03:24:24,485 [wrapper] pilotpid: 2269938
[2025-10-14 05:24:24] 2025-10-14 03:24:24,487 [wrapper] Pilot exit status: 0
[2025-10-14 05:24:24] 2025-10-14 03:24:24,497 [wrapper] pandaids: 6842078651
[2025-10-14 05:24:24] 2025-10-14 03:24:24,531 [wrapper] cleanup supervisor_pilot 2328491 2269939
[2025-10-14 05:24:24] 2025-10-14 03:24:24,534 [wrapper] Test setup, not cleaning
[2025-10-14 05:24:24] 2025-10-14 03:24:24,537 [wrapper] apfmon messages muted
[2025-10-14 05:24:24] 2025-10-14 03:24:24,539 [wrapper] ==== wrapper stdout END ====
[2025-10-14 05:24:24] 2025-10-14 03:24:24,542 [wrapper] ==== wrapper stderr END ====
[2025-10-14 05:24:24]  *** Error codes and diagnostics ***
[2025-10-14 05:24:24]     "exeErrorCode": 0,
[2025-10-14 05:24:24]     "exeErrorDiag": "",
[2025-10-14 05:24:24]     "pilotErrorCode": 0,
[2025-10-14 05:24:24]     "pilotErrorDiag": "",
[2025-10-14 05:24:24]  *** Listing of results directory ***
[2025-10-14 05:24:24] total 406816
[2025-10-14 05:24:24] -rw-r--r--. 1 boinc boinc    557409 Oct 13 05:15 pilot3.tar.gz
[2025-10-14 05:24:24] -rw-r--r--. 1 boinc boinc      5112 Oct 13 05:24 queuedata.json
[2025-10-14 05:24:24] -rwx------. 1 boinc boinc     36292 Oct 13 05:25 runpilot2-wrapper.sh
[2025-10-14 05:24:24] -rw-r--r--. 1 boinc boinc       100 Oct 14 04:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-14 05:24:24] -rwxr-xr-x. 1 boinc boinc      7986 Oct 14 04:32 run_atlas
[2025-10-14 05:24:24] -rw-r--r--. 1 boinc boinc       105 Oct 14 04:32 job.xml
[2025-10-14 05:24:24] -rw-r--r--. 1 boinc boinc      6518 Oct 14 04:32 init_data.xml
[2025-10-14 05:24:24] -rw-r--r--. 2 boinc boinc 222040219 Oct 14 04:32 EVNT.46676267._002511.pool.root.1
[2025-10-14 05:24:24] -rw-r--r--. 2 boinc boinc     15120 Oct 14 04:32 start_atlas.sh
[2025-10-14 05:24:24] drwxrwx--x. 2 boinc boinc      4096 Oct 14 04:32 shared
[2025-10-14 05:24:24] -rw-r--r--. 2 boinc boinc    569685 Oct 14 04:32 input.tar.gz
[2025-10-14 05:24:24] -rw-r--r--. 1 boinc boinc         0 Oct 14 04:32 boinc_lockfile
[2025-10-14 05:24:24] -rw-r--r--. 1 boinc boinc      2547 Oct 14 04:32 pandaJob.out
[2025-10-14 05:24:24] -rw-------. 1 boinc boinc    972807 Oct 14 04:32 agis_schedconf.cvmfs.json
[2025-10-14 05:24:24] -rw-------. 1 boinc boinc   1560580 Oct 14 04:32 agis_ddmendpoints.agis.ALL.json
[2025-10-14 05:24:24] drwx------. 5 boinc boinc      4096 Oct 14 04:32 pilot3
[2025-10-14 05:24:24] -rw-------. 1 boinc boinc 188992628 Oct 14 05:23 HITS.46676269._095804.pool.root.1
[2025-10-14 05:24:24] -rw-r--r--. 1 boinc boinc       529 Oct 14 05:23 boinc_task_state.xml
[2025-10-14 05:24:24] -rw-------. 1 boinc boinc      1012 Oct 14 05:23 memory_monitor_summary.json
[2025-10-14 05:24:24] -rw-------. 1 boinc boinc    347108 Oct 14 05:23 log.46676269._095804.job.log.tgz.1
[2025-10-14 05:24:24] -rw-------. 1 boinc boinc      7770 Oct 14 05:23 heartbeat.json
[2025-10-14 05:24:24] -rw-------. 1 boinc boinc        95 Oct 14 05:24 pilot_heartbeat.json
[2025-10-14 05:24:24] -rw-r--r--. 1 boinc boinc        27 Oct 14 05:24 wrapper_checkpoint.txt
[2025-10-14 05:24:24] -rw-r--r--. 1 boinc boinc      8192 Oct 14 05:24 boinc_mmap_file
[2025-10-14 05:24:24] -rw-------. 1 boinc boinc      4895 Oct 14 05:24 pilotlog.txt
[2025-10-14 05:24:24] -rw-------. 1 boinc boinc    476418 Oct 14 05:24 log.46676269._095804.job.log.1
[2025-10-14 05:24:24] -rw-------. 1 boinc boinc       357 Oct 14 05:24 output.list
[2025-10-14 05:24:24] -rw-r--r--. 1 boinc boinc       620 Oct 14 05:24 runtime_log
[2025-10-14 05:24:24] -rw-------. 1 boinc boinc    839680 Oct 14 05:24 result.tar.gz
[2025-10-14 05:24:24] -rw-------. 1 boinc boinc       663 Oct 14 05:24 xEFNDmXMOS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmkdmNDmH6xXBn.diag
[2025-10-14 05:24:24] -rw-r--r--. 1 boinc boinc      8750 Oct 14 05:24 runtime_log.err
[2025-10-14 05:24:24] -rw-r--r--. 1 boinc boinc     21783 Oct 14 05:24 stderr.txt
[2025-10-14 05:24:24] HITS file was successfully produced:
[2025-10-14 05:24:24] -rw-------. 1 boinc boinc 188992628 Oct 14 05:23 shared/HITS.pool.root.1
[2025-10-14 05:24:24]  *** Contents of shared directory: ***
[2025-10-14 05:24:24] total 402808
[2025-10-14 05:24:24] -rw-r--r--. 2 boinc boinc 222040219 Oct 14 04:32 ATLAS.root_0
[2025-10-14 05:24:24] -rw-r--r--. 2 boinc boinc     15120 Oct 14 04:32 start_atlas.sh
[2025-10-14 05:24:24] -rw-r--r--. 2 boinc boinc    569685 Oct 14 04:32 input.tar.gz
[2025-10-14 05:24:24] -rw-------. 1 boinc boinc 188992628 Oct 14 05:23 HITS.pool.root.1
[2025-10-14 05:24:24] -rw-------. 1 boinc boinc    839680 Oct 14 05:24 result.tar.gz
05:24:25 (2266067): run_atlas exited; CPU time 33440.055273
05:24:25 (2266067): called boinc_finish(0)

</stderr_txt>
]]>

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