Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
02:03:46 (3177687): wrapper (7.7.26015): starting
02:03:46 (3177687): wrapper: running run_atlas (--nthreads 3)
[2025-10-14 02:03:46] Arguments: --nthreads 3
[2025-10-14 02:03:46] Threads: 3
[2025-10-14 02:03:46] Checking for CVMFS
[2025-10-14 02:03:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-14 02:03:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-14 02:03:46] Running cvmfs_config stat atlas.cern.ch
[2025-10-14 02:03:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-14 02:03:47] 2.9.2.0 193215 10810 88808 151677 2 57 4421035 36864000 12 130560 0 7857876 99.990 366142 849 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-14 02:03:47] CVMFS is ok
[2025-10-14 02:03:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-14 02:03:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-14 02:03:47] Further information can be found at the LHC@home message board.
[2025-10-14 02:03:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-14 02:03:47] Checking for apptainer binary...
[2025-10-14 02:03:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-14 02:03:47] Running /usr/bin/apptainer --version
[2025-10-14 02:03:47] apptainer version 1.4.1-1.1
[2025-10-14 02:03:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-14 02:03:47] thA383
[2025-10-14 02:03:47] apptainer works
[2025-10-14 02:03:47] Set ATHENA_PROC_NUMBER=3
[2025-10-14 02:03:47] Set ATHENA_CORE_NUMBER=3
[2025-10-14 02:03:47] Starting ATLAS job with PandaID=6841070256
[2025-10-14 02:03:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-14 03:27:04]  *** The last 200 lines of the pilot log: ***
[2025-10-14 03:27:04] 2025-10-14 01:26:04,424 | INFO     | update_server=False
[2025-10-14 03:27:04] 2025-10-14 01:26:04,424 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-14 03:27:04] 2025-10-14 01:26:04,424 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-14 03:27:04] 2025-10-14 01:26:04,424 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-14 03:27:04] 2025-10-14 01:26:04,424 | INFO     | aborting loop
[2025-10-14 03:27:04] 2025-10-14 01:26:04,809 | INFO     | all job control threads have been joined
[2025-10-14 03:27:04] 2025-10-14 01:26:04,835 | INFO     | all payload control threads have been joined
[2025-10-14 03:27:04] 2025-10-14 01:26:04,869 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-14 03:27:04] 2025-10-14 01:26:05,430 | INFO     | [job] retrieve thread has finished
[2025-10-14 03:27:04] 2025-10-14 01:26:05,430 | INFO     | [job] queue monitor thread has finished
[2025-10-14 03:27:04] 2025-10-14 01:26:05,430 | INFO     | [job] job monitor thread has finished
[2025-10-14 03:27:04] 2025-10-14 01:26:05,479 | INFO     | [payload] validate_pre thread has finished
[2025-10-14 03:27:04] 2025-10-14 01:26:05,506 | INFO     | all data control threads have been joined
[2025-10-14 03:27:04] 2025-10-14 01:26:05,815 | INFO     | [job] control thread has finished
[2025-10-14 03:27:04] 2025-10-14 01:26:05,841 | INFO     | [payload] control thread has finished
[2025-10-14 03:27:04] 2025-10-14 01:26:05,988 | INFO     | [payload] failed_post thread has finished
[2025-10-14 03:27:04] 2025-10-14 01:26:06,298 | INFO     | [data] copytool_in thread has finished
[2025-10-14 03:27:04] 2025-10-14 01:26:06,512 | INFO     | [data] control thread has finished
[2025-10-14 03:27:04] 2025-10-14 01:26:06,544 | INFO     | [payload] validate_post thread has finished
[2025-10-14 03:27:04] 2025-10-14 01:26:06,763 | INFO     | [payload] execute_payloads thread has finished
[2025-10-14 03:27:04] 2025-10-14 01:26:06,876 | INFO     | [data] copytool_out thread has finished
[2025-10-14 03:27:04] 2025-10-14 01:26:06,908 | INFO     | [job] create_data_payload thread has finished
[2025-10-14 03:27:04] 2025-10-14 01:26:06,919 | INFO     | [job] validate thread has finished
[2025-10-14 03:27:04] 2025-10-14 01:26:06,986 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-14 03:27:04] 2025-10-14 01:26:10,993 | INFO     | [data] queue_monitor thread has finished
[2025-10-14 03:27:04] 2025-10-14 01:26:14,722 | INFO     | job.realtimelogging is not enabled
[2025-10-14 03:27:04] 2025-10-14 01:26:15,728 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-14 03:27:04] 2025-10-14 01:26:35,429 | INFO     | PID=3181401 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-14 03:27:04] 2025-10-14 01:26:35,429 | INFO     | found 0 job(s) in 20 queues
[2025-10-14 03:27:04] 2025-10-14 01:26:35,429 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-14 03:27:04] 2025-10-14 01:26:35,429 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-14 03:27:04] 2025-10-14 01:26:57,600 | INFO     | [monitor] cgroup control has ended
[2025-10-14 03:27:04] 2025-10-14 01:26:59,263 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139735077730112)>', '<ExcThread(monitor, started 139734571525888)>']
[2025-10-14 03:27:04] 2025-10-14 01:26:59,556 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-14 03:27:04] 2025-10-14 01:26:59,557 | INFO     | [monitor] control thread has ended
[2025-10-14 03:27:04] 2025-10-14 01:27:04,276 | INFO     | all workflow threads have been joined
[2025-10-14 03:27:04] 2025-10-14 01:27:04,277 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-14 03:27:04] 2025-10-14 01:27:04,277 | INFO     | traces error code: 0
[2025-10-14 03:27:04] 2025-10-14 01:27:04,277 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-14 03:27:04] 2025-10-14 01:27:04,328 [wrapper] ==== pilot stdout END ====
[2025-10-14 03:27:04] 2025-10-14 01:27:04,330 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-14 03:27:04] 2025-10-14 01:27:04,332 [wrapper] pilotpid: 3181401
[2025-10-14 03:27:04] 2025-10-14 01:27:04,334 [wrapper] Pilot exit status: 0
[2025-10-14 03:27:04] 2025-10-14 01:27:04,342 [wrapper] pandaids: 6841070256
[2025-10-14 03:27:04] 2025-10-14 01:27:04,358 [wrapper] cleanup supervisor_pilot 3199683 3181402
[2025-10-14 03:27:04] 2025-10-14 01:27:04,361 [wrapper] Test setup, not cleaning
[2025-10-14 03:27:04] 2025-10-14 01:27:04,363 [wrapper] apfmon messages muted
[2025-10-14 03:27:04] 2025-10-14 01:27:04,365 [wrapper] ==== wrapper stdout END ====
[2025-10-14 03:27:04] 2025-10-14 01:27:04,367 [wrapper] ==== wrapper stderr END ====
[2025-10-14 03:27:04]  *** Error codes and diagnostics ***
[2025-10-14 03:27:04]     "exeErrorCode": 0,
[2025-10-14 03:27:04]     "exeErrorDiag": "",
[2025-10-14 03:27:04]     "pilotErrorCode": 0,
[2025-10-14 03:27:04]     "pilotErrorDiag": "",
[2025-10-14 03:27:04]  *** Listing of results directory ***
[2025-10-14 03:27:04] total 411036
[2025-10-14 03:27:04] -rw-r--r-- 1 boinc boinc    557409 Oct 13 03:18 pilot3.tar.gz
[2025-10-14 03:27:04] -rwx------ 1 boinc boinc     36292 Oct 13 03:21 runpilot2-wrapper.sh
[2025-10-14 03:27:04] -rw-r--r-- 1 boinc boinc      5112 Oct 13 03:21 queuedata.json
[2025-10-14 03:27:04] -rw-r--r-- 1 boinc boinc       100 Oct 14 02:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-14 03:27:04] -rwxr-xr-x 1 boinc boinc      7986 Oct 14 02:03 run_atlas
[2025-10-14 03:27:04] -rw-r--r-- 1 boinc boinc       105 Oct 14 02:03 job.xml
[2025-10-14 03:27:04] -rw-r--r-- 2 boinc boinc 220261884 Oct 14 02:03 EVNT.46676267._004729.pool.root.1
[2025-10-14 03:27:04] -rw-r--r-- 2 boinc boinc    569675 Oct 14 02:03 input.tar.gz
[2025-10-14 03:27:04] -rw-r--r-- 2 boinc boinc     15120 Oct 14 02:03 start_atlas.sh
[2025-10-14 03:27:04] drwxrwx--x 2 boinc boinc      4096 Oct 14 02:03 shared
[2025-10-14 03:27:04] -rw-r--r-- 1 boinc boinc         0 Oct 14 02:03 boinc_setup_complete
[2025-10-14 03:27:04] -rw-r--r-- 1 boinc boinc      6438 Oct 14 02:03 init_data.xml
[2025-10-14 03:27:04] -rw-r--r-- 1 boinc boinc         0 Oct 14 02:03 boinc_lockfile
[2025-10-14 03:27:04] -rw-r--r-- 1 boinc boinc      2550 Oct 14 02:03 pandaJob.out
[2025-10-14 03:27:04] -rw------- 1 boinc boinc    972799 Oct 14 02:03 agis_schedconf.cvmfs.json
[2025-10-14 03:27:04] -rw------- 1 boinc boinc   1560580 Oct 14 02:03 agis_ddmendpoints.agis.ALL.json
[2025-10-14 03:27:04] drwx------ 5 boinc boinc      4096 Oct 14 02:03 pilot3
[2025-10-14 03:27:04] -rw------- 1 boinc boinc 194802724 Oct 14 03:25 HITS.46676269._094061.pool.root.1
[2025-10-14 03:27:04] -rw-r--r-- 1 boinc boinc       529 Oct 14 03:25 boinc_task_state.xml
[2025-10-14 03:27:04] -rw------- 1 boinc boinc      1017 Oct 14 03:25 memory_monitor_summary.json
[2025-10-14 03:27:04] -rw------- 1 boinc boinc    252588 Oct 14 03:25 log.46676269._094061.job.log.tgz.1
[2025-10-14 03:27:04] -rw------- 1 boinc boinc      7757 Oct 14 03:26 heartbeat.json
[2025-10-14 03:27:04] -rw------- 1 boinc boinc        95 Oct 14 03:26 pilot_heartbeat.json
[2025-10-14 03:27:04] -rw-r--r-- 1 boinc boinc      8192 Oct 14 03:26 boinc_mmap_file
[2025-10-14 03:27:04] -rw-r--r-- 1 boinc boinc        27 Oct 14 03:26 wrapper_checkpoint.txt
[2025-10-14 03:27:04] -rw------- 1 boinc boinc      4824 Oct 14 03:27 pilotlog.txt
[2025-10-14 03:27:04] -rw------- 1 boinc boinc    724475 Oct 14 03:27 log.46676269._094061.job.log.1
[2025-10-14 03:27:04] -rw------- 1 boinc boinc       357 Oct 14 03:27 output.list
[2025-10-14 03:27:04] -rw-r--r-- 1 boinc boinc       620 Oct 14 03:27 runtime_log
[2025-10-14 03:27:04] -rw------- 1 boinc boinc    993280 Oct 14 03:27 result.tar.gz
[2025-10-14 03:27:04] -rw-r--r-- 1 boinc boinc      8777 Oct 14 03:27 runtime_log.err
[2025-10-14 03:27:04] -rw------- 1 boinc boinc       658 Oct 14 03:27 6PPODmRQMS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmNSVMDmsMgcvm.diag
[2025-10-14 03:27:04] -rw-r--r-- 1 boinc boinc      7508 Oct 14 03:27 stderr.txt
[2025-10-14 03:27:04] HITS file was successfully produced:
[2025-10-14 03:27:04] -rw------- 1 boinc boinc 194802724 Oct 14 03:25 shared/HITS.pool.root.1
[2025-10-14 03:27:04]  *** Contents of shared directory: ***
[2025-10-14 03:27:04] total 406896
[2025-10-14 03:27:04] -rw-r--r-- 2 boinc boinc 220261884 Oct 14 02:03 ATLAS.root_0
[2025-10-14 03:27:04] -rw-r--r-- 2 boinc boinc    569675 Oct 14 02:03 input.tar.gz
[2025-10-14 03:27:04] -rw-r--r-- 2 boinc boinc     15120 Oct 14 02:03 start_atlas.sh
[2025-10-14 03:27:04] -rw------- 1 boinc boinc 194802724 Oct 14 03:25 HITS.pool.root.1
[2025-10-14 03:27:04] -rw------- 1 boinc boinc    993280 Oct 14 03:27 result.tar.gz
03:27:05 (3177687): run_atlas exited; CPU time 14031.117181
03:27:05 (3177687): called boinc_finish(0)

</stderr_txt>
]]>

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