Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:03:58 (1704987): wrapper (7.7.26015): starting
07:03:58 (1704987): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 07:03:58] Arguments: --nthreads 8
[2025-10-13 07:03:58] Threads: 8
[2025-10-13 07:03:58] Checking for CVMFS
[2025-10-13 07:03:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 07:03:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 07:03:59] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 07:04:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 07:04:00] 2.13.2.0 4520 38666 209212 151658 3 103 33260875 39288832 7424 16776704 0 47613379 99.664 41552921 38736 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 07:04:00] CVMFS is ok
[2025-10-13 07:04:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 07:04:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 07:04:00] Further information can be found at the LHC@home message board.
[2025-10-13 07:04:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 07:04:00] Checking for apptainer binary...
[2025-10-13 07:04:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 07:04:00] Running /usr/bin/apptainer --version
[2025-10-13 07:04:00] apptainer version 1.4.3-1.el9
[2025-10-13 07:04:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 07:04:00] c-210-5.aglt2.org
[2025-10-13 07:04:00] apptainer works
[2025-10-13 07:04:00] Set ATHENA_PROC_NUMBER=8
[2025-10-13 07:04:00] Set ATHENA_CORE_NUMBER=8
[2025-10-13 07:04:01] Starting ATLAS job with PandaID=6842305420
[2025-10-13 07:04:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 15:19:01]  *** The last 200 lines of the pilot log: ***
[2025-10-13 15:19:01] 2025-10-13 19:18:26,085 | INFO     | sum of square deviations: 33020454712.95347
[2025-10-13 15:19:01] 2025-10-13 19:18:26,091 | INFO     | sum of deviations: 72000899889.96628
[2025-10-13 15:19:01] 2025-10-13 19:18:26,098 | INFO     | mean x: 1760368602.5864978
[2025-10-13 15:19:01] 2025-10-13 19:18:26,099 | INFO     | mean y: 2531637.744725738
[2025-10-13 15:19:01] 2025-10-13 19:18:26,099 | INFO     | -- intersect: -3835941351.985144
[2025-10-13 15:19:01] 2025-10-13 19:18:26,099 | INFO     | intersect: -3835941351.985144
[2025-10-13 15:19:01] 2025-10-13 19:18:26,100 | INFO     | chi2: 0.02092897400179276
[2025-10-13 15:19:01] 2025-10-13 19:18:26,101 | INFO     | current chi2=0.02092897400179276 (change=90.35134400772563 %)
[2025-10-13 15:19:01] 2025-10-13 19:18:26,101 | INFO     | sum of square deviations: 31986548291.236725
[2025-10-13 15:19:01] 2025-10-13 19:18:26,107 | INFO     | sum of deviations: 62504626523.47759
[2025-10-13 15:19:01] 2025-10-13 19:18:26,107 | INFO     | mean x: 1760368755.076759
[2025-10-13 15:19:01] 2025-10-13 19:18:26,107 | INFO     | mean y: 2533038.2089552237
[2025-10-13 15:19:01] 2025-10-13 19:18:26,108 | INFO     | -- intersect: -3437387724.0389986
[2025-10-13 15:19:01] 2025-10-13 19:18:26,108 | INFO     | intersect: -3437387724.0389986
[2025-10-13 15:19:01] 2025-10-13 19:18:26,109 | INFO     | chi2: 0.012560168246610645
[2025-10-13 15:19:01] 2025-10-13 19:18:26,109 | INFO     | current chi2=0.012560168246610645 (change=39.98669860483963 %)
[2025-10-13 15:19:01] 2025-10-13 19:18:26,110 | INFO     | sum of square deviations: 30974228216.722034
[2025-10-13 15:19:01] 2025-10-13 19:18:26,116 | INFO     | sum of deviations: 56295459543.7845
[2025-10-13 15:19:01] 2025-10-13 19:18:26,116 | INFO     | mean x: 1760368907.5840516
[2025-10-13 15:19:01] 2025-10-13 19:18:26,116 | INFO     | mean y: 2533971.646551724
[2025-10-13 15:19:01] 2025-10-13 19:18:26,116 | INFO     | -- intersect: -3196925137.57292
[2025-10-13 15:19:01] 2025-10-13 19:18:26,116 | INFO     | intersect: -3196925137.57292
[2025-10-13 15:19:01] 2025-10-13 19:18:26,117 | INFO     | chi2: 0.008851861914684829
[2025-10-13 15:19:01] 2025-10-13 19:18:26,117 | INFO     | current chi2=0.008851861914684829 (change=29.524336450879158 %)
[2025-10-13 15:19:01] 2025-10-13 19:18:26,118 | INFO     | sum of square deviations: 29983432965.782196
[2025-10-13 15:19:01] 2025-10-13 19:18:26,124 | INFO     | sum of deviations: 53162164041.8453
[2025-10-13 15:19:01] 2025-10-13 19:18:26,124 | INFO     | mean x: 1760369060.0958605
[2025-10-13 15:19:01] 2025-10-13 19:18:26,124 | INFO     | mean y: 2534453.708061002
[2025-10-13 15:19:01] 2025-10-13 19:18:26,124 | INFO     | -- intersect: -3118690152.3537803
[2025-10-13 15:19:01] 2025-10-13 19:18:26,124 | INFO     | intersect: -3118690152.3537803
[2025-10-13 15:19:01] 2025-10-13 19:18:26,125 | INFO     | chi2: 0.008542839808832107
[2025-10-13 15:19:01] 2025-10-13 19:18:26,125 | INFO     | current chi2=0.008542839808832107 (change=3.491040741836112 %)
[2025-10-13 15:19:01] 2025-10-13 19:18:26,126 | INFO     | left removable region: 50
[2025-10-13 15:19:01] 2025-10-13 19:18:26,127 | INFO     | sum of square deviations: 24309091155.072495
[2025-10-13 15:19:01] 2025-10-13 19:18:26,139 | INFO     | sufficient remaining disk space (53837037568 B)
[2025-10-13 15:19:01] 2025-10-13 19:18:26,139 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-10-13 15:19:01] 2025-10-13 19:18:26,140 | INFO     | size of work directory /tmp/boinchome/slots/1/PanDA_Pilot-6842305420: 3439952 B (within 2537553920 B limit)
[2025-10-13 15:19:01] 2025-10-13 19:18:26,141 | INFO     | pfn file=/tmp/boinchome/slots/1/PanDA_Pilot-6842305420/HITS.46676269._096052.pool.root.1 does not exist (skip from workdir size calculation)
[2025-10-13 15:19:01] 2025-10-13 19:18:26,141 | INFO     | total size of present files: 0 B (workdir size: 3439952 B)
[2025-10-13 15:19:01] 2025-10-13 19:18:26,141 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/1/PanDA_Pilot-6842305420/HITS.46676269._096052.pool.root.1 since it does not exist
[2025-10-13 15:19:01] 2025-10-13 19:18:26,145 | INFO     | sum of deviations: 43157604595.0023
[2025-10-13 15:19:01] 2025-10-13 19:18:26,145 | INFO     | mean x: 1760369639.5957944
[2025-10-13 15:19:01] 2025-10-13 19:18:26,146 | INFO     | mean y: 2535701.890186916
[2025-10-13 15:19:01] 2025-10-13 19:18:26,146 | INFO     | -- intersect: -3122769821.1371064
[2025-10-13 15:19:01] 2025-10-13 19:18:26,146 | INFO     | intersect: -3122769821.1371064
[2025-10-13 15:19:01] 2025-10-13 19:18:26,147 | INFO     | chi2: 0.008377384034258483
[2025-10-13 15:19:01] 2025-10-13 19:18:26,147 | INFO     | -- intersect: -3122769821.1371064
[2025-10-13 15:19:01] 2025-10-13 19:18:26,147 | INFO     | current memory leak: 1.78 B/s (using 428 data points, chi2=0.01)
[2025-10-13 15:19:01] 2025-10-13 19:18:26,148 | INFO     | could have reported an average CPU frequency of 2600 MHz (20 samples)
[2025-10-13 15:19:01] 2025-10-13 19:18:26,149 | INFO     | ..............................
[2025-10-13 15:19:01] 2025-10-13 19:18:26,149 | INFO     | . Timing measurements:
[2025-10-13 15:19:01] 2025-10-13 19:18:26,149 | INFO     | . get job = 0 s
[2025-10-13 15:19:01] 2025-10-13 19:18:26,149 | INFO     | . initial setup = 5 s
[2025-10-13 15:19:01] 2025-10-13 19:18:26,149 | INFO     | . payload setup = 23 s
[2025-10-13 15:19:01] 2025-10-13 19:18:26,149 | INFO     | . stage-in = 0 s
[2025-10-13 15:19:01] 2025-10-13 19:18:26,149 | INFO     | . payload execution = 29537 s
[2025-10-13 15:19:01] 2025-10-13 19:18:26,153 | INFO     | . stage-out = 3 s
[2025-10-13 15:19:01] 2025-10-13 19:18:26,157 | INFO     | . log creation = 0 s
[2025-10-13 15:19:01] 2025-10-13 19:18:26,158 | INFO     | ..............................
[2025-10-13 15:19:01] 2025-10-13 19:18:26,159 | INFO     | time since job start (29629s) is within the limit (172800.0s)
[2025-10-13 15:19:01] 2025-10-13 19:18:26,386 | INFO     | 
[2025-10-13 15:19:01] 2025-10-13 19:18:26,387 | INFO     | job summary report
[2025-10-13 15:19:01] 2025-10-13 19:18:26,387 | INFO     | --------------------------------------------------
[2025-10-13 15:19:01] 2025-10-13 19:18:26,387 | INFO     | PanDA job id: 6842305420
[2025-10-13 15:19:01] 2025-10-13 19:18:26,387 | INFO     | task id: 46676269
[2025-10-13 15:19:01] 2025-10-13 19:18:26,387 | INFO     | errors: (none)
[2025-10-13 15:19:01] 2025-10-13 19:18:26,387 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 15:19:01] 2025-10-13 19:18:26,387 | INFO     | pilot state: finished 
[2025-10-13 15:19:01] 2025-10-13 19:18:26,387 | INFO     | transexitcode: 0
[2025-10-13 15:19:01] 2025-10-13 19:18:26,388 | INFO     | exeerrorcode: 0
[2025-10-13 15:19:01] 2025-10-13 19:18:26,388 | INFO     | exeerrordiag: 
[2025-10-13 15:19:01] 2025-10-13 19:18:26,388 | INFO     | exitcode: 0
[2025-10-13 15:19:01] 2025-10-13 19:18:26,388 | INFO     | exitmsg: OK
[2025-10-13 15:19:01] 2025-10-13 19:18:26,388 | INFO     | cpuconsumptiontime: 54853 s
[2025-10-13 15:19:01] 2025-10-13 19:18:26,388 | INFO     | nevents: 400
[2025-10-13 15:19:01] 2025-10-13 19:18:26,388 | INFO     | neventsw: 0
[2025-10-13 15:19:01] 2025-10-13 19:18:26,388 | INFO     | pid: 1716010
[2025-10-13 15:19:01] 2025-10-13 19:18:26,388 | INFO     | pgrp: 1716010
[2025-10-13 15:19:01] 2025-10-13 19:18:26,388 | INFO     | corecount: 8
[2025-10-13 15:19:01] 2025-10-13 19:18:26,388 | INFO     | event service: False
[2025-10-13 15:19:01] 2025-10-13 19:18:26,389 | INFO     | sizes: {0: 2348636, 1: 2348636, 2: 2348863, 13: 2348863, 18: 2349181, 23: 2349209, 29565: 2387357, 29566: 2387356, 29569: 2396466, 29588: 2396632}
[2025-10-13 15:19:01] 2025-10-13 19:18:26,389 | INFO     | --------------------------------------------------
[2025-10-13 15:19:01] 2025-10-13 19:18:26,389 | INFO     | 
[2025-10-13 15:19:01] 2025-10-13 19:18:26,389 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-13 15:19:01] 2025-10-13 19:18:26,500 | INFO     | number of running child processes to parent process 1716010: 1
[2025-10-13 15:19:01] 2025-10-13 19:18:26,500 | INFO     | maximum number of monitored processes: 6
[2025-10-13 15:19:01] 2025-10-13 19:18:26,500 | INFO     | aborting job monitoring since job object (job id=6842305420) has expired
[2025-10-13 15:19:01] 2025-10-13 19:18:26,515 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 15:19:01] 2025-10-13 19:18:26,515 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 15:19:01] 2025-10-13 19:18:26,515 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 15:19:01] 2025-10-13 19:18:26,515 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 15:19:01] 2025-10-13 19:18:26,516 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 15:19:01] 2025-10-13 19:18:26,516 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 15:19:01] 2025-10-13 19:18:26,517 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 15:19:01] 2025-10-13 19:18:26,517 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 15:19:01] 2025-10-13 19:18:26,517 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 15:19:01] 2025-10-13 19:18:26,517 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 15:19:01] 2025-10-13 19:18:26,517 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 15:19:01] 2025-10-13 19:18:26,517 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 15:19:01] 2025-10-13 19:18:26,517 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 15:19:01] 2025-10-13 19:18:26,517 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 15:19:01] 2025-10-13 19:18:26,517 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 15:19:01] 2025-10-13 19:18:26,517 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 15:19:01] 2025-10-13 19:18:26,518 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 15:19:01] 2025-10-13 19:18:26,518 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 15:19:01] 2025-10-13 19:18:26,518 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 15:19:01] 2025-10-13 19:18:26,518 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 15:19:01] 2025-10-13 19:18:26,518 | INFO     | job 6842305420 has completed (purged errors)
[2025-10-13 15:19:01] 2025-10-13 19:18:26,518 | INFO     | overall cleanup function is called
[2025-10-13 15:19:01] 2025-10-13 19:18:27,537 | INFO     | --- collectZombieJob: --- 10, [1716010]
[2025-10-13 15:19:01] 2025-10-13 19:18:27,537 | INFO     | zombie collector waiting for pid 1716010
[2025-10-13 15:19:01] 2025-10-13 19:18:27,537 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 15:19:01] 2025-10-13 19:18:27,537 | INFO     | collected zombie processes
[2025-10-13 15:19:01] 2025-10-13 19:18:27,537 | INFO     | will attempt to kill all subprocesses of pid=1716010
[2025-10-13 15:19:01] 2025-10-13 19:18:27,820 | INFO     | process IDs to be killed: [1716010] (in reverse order)
[2025-10-13 15:19:01] 2025-10-13 19:18:28,100 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 15:19:01] 2025-10-13 19:18:28,101 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 15:19:01] 2025-10-13 19:18:28,126 | INFO     | did not find any defunct processes belonging to 1716010
[2025-10-13 15:19:01] 2025-10-13 19:18:28,150 | INFO     | did not find any defunct processes belonging to 1716010
[2025-10-13 15:19:01] 2025-10-13 19:18:28,151 | INFO     | ready for new job
[2025-10-13 15:19:01] 2025-10-13 19:18:28,151 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 15:19:01] 2025-10-13 19:18:28,160 | INFO     | ***************************************
[2025-10-13 15:19:01] 2025-10-13 19:18:28,161 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 15:19:01] 2025-10-13 19:18:28,161 | INFO     | ***************************************
[2025-10-13 15:19:01] 2025-10-13 19:18:28,161 | INFO     | 
[2025-10-13 15:19:01] 2025-10-13 19:18:28,163 | INFO     | architecture information:
[2025-10-13 15:19:01] 2025-10-13 19:18:28,164 | INFO     | executing command: cat /etc/os-release
[2025-10-13 15:19:01] 2025-10-13 19:18:28,183 | INFO     | cat /etc/os-release:
[2025-10-13 15:19:01] NAME="CentOS Linux"
[2025-10-13 15:19:01] VERSION="7 (Core)"
[2025-10-13 15:19:01] ID="centos"
[2025-10-13 15:19:01] ID_LIKE="rhel fedora"
[2025-10-13 15:19:01] VERSION_ID="7"
[2025-10-13 15:19:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 15:19:01] ANSI_COLOR="0;31"
[2025-10-13 15:19:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 15:19:01] HOME_URL="https://www.centos.org/"
[2025-10-13 15:19:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 15:19:01] 
[2025-10-13 15:19:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 15:19:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 15:19:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 15:19:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 15:19:01] 
[2025-10-13 15:19:01] 2025-10-13 19:18:28,183 | INFO     | ***************************************
[2025-10-13 15:19:01] 2025-10-13 19:18:28,687 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-13 15:19:01] 2025-10-13 19:18:28,709 | INFO     | sufficient remaining disk space (53844377600 B)
[2025-10-13 15:19:01] 2025-10-13 19:18:28,709 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 15:19:01] 2025-10-13 19:18:28,709 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 15:19:01] 2025-10-13 19:18:28,709 | INFO     | update_server=False
[2025-10-13 15:19:01] 2025-10-13 19:18:28,710 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 15:19:01] 2025-10-13 19:18:28,710 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 15:19:01] 2025-10-13 19:18:28,907 | INFO     | all payload control threads have been joined
[2025-10-13 15:19:01] 2025-10-13 19:18:29,011 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 15:19:01] 2025-10-13 19:18:29,011 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 15:19:01] 2025-10-13 19:18:29,011 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 15:19:01] 2025-10-13 19:18:29,011 | INFO     | will abort loop
[2025-10-13 15:19:01] 2025-10-13 19:18:29,246 | INFO     | all job control threads have been joined
[2025-10-13 15:19:01] 2025-10-13 19:18:29,252 | INFO     | all data control threads have been joined
[2025-10-13 15:19:01] 2025-10-13 19:18:29,509 | INFO     | [monitor] cgroup control has ended
[2025-10-13 15:19:01] 2025-10-13 19:18:29,715 | INFO     | [job] retrieve thread has finished
[2025-10-13 15:19:01] 2025-10-13 19:18:29,913 | INFO     | [payload] control thread has finished
[2025-10-13 15:19:01] 2025-10-13 19:18:30,017 | INFO     | [job] job monitor thread has finished
[2025-10-13 15:19:01] 2025-10-13 19:18:30,144 | INFO     | [data] copytool_in thread has finished
[2025-10-13 15:19:01] 2025-10-13 19:18:30,254 | INFO     | [job] control thread has finished
[2025-10-13 15:19:01] 2025-10-13 19:18:30,259 | INFO     | [data] control thread has finished
[2025-10-13 15:19:01] 2025-10-13 19:18:30,269 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 15:19:01] 2025-10-13 19:18:30,275 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 15:19:01] 2025-10-13 19:18:30,518 | INFO     | [payload] failed_post thread has finished
[2025-10-13 15:19:01] 2025-10-13 19:18:30,717 | INFO     | [data] copytool_out thread has finished
[2025-10-13 15:19:01] 2025-10-13 19:18:30,718 | INFO     | [payload] validate_post thread has finished
[2025-10-13 15:19:01] 2025-10-13 19:18:30,816 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 15:19:01] 2025-10-13 19:18:31,044 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 15:19:01] 2025-10-13 19:18:31,104 | INFO     | [job] validate thread has finished
[2025-10-13 15:19:01] 2025-10-13 19:18:31,401 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 15:19:01] 2025-10-13 19:18:31,813 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 15:19:01] 2025-10-13 19:18:32,407 | INFO     | [job] queue monitor thread has finished
[2025-10-13 15:19:01] 2025-10-13 19:18:35,821 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 15:19:01] 2025-10-13 19:18:37,461 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139965887895360)>', '<ExcThread(monitor, started 139965614757632)>']
[2025-10-13 15:19:01] 2025-10-13 19:18:42,491 | INFO     | all workflow threads have been joined
[2025-10-13 15:19:01] 2025-10-13 19:18:42,491 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 15:19:01] 2025-10-13 19:18:42,491 | INFO     | traces error code: 0
[2025-10-13 15:19:01] 2025-10-13 19:18:42,492 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 15:19:01] 2025-10-13 19:18:59,592 | INFO     | PID=1709129 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 15:19:01] 2025-10-13 19:18:59,593 | INFO     | .. there are 6 such processes running
[2025-10-13 15:19:01] 2025-10-13 19:18:59,593 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 15:19:01] 2025-10-13 19:18:59,593 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 15:19:01] 2025-10-13 19:18:59,593 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 15:19:01] 2025-10-13 19:18:59,593 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 15:19:01] 2025-10-13 19:18:59,593 | INFO     | [monitor] control thread has ended
[2025-10-13 15:19:01] 2025-10-13 19:19:00,020 [wrapper] ==== pilot stdout END ====
[2025-10-13 15:19:01] 2025-10-13 19:19:00,024 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 15:19:01] 2025-10-13 19:19:00,028 [wrapper] pilotpid: 1709129
[2025-10-13 15:19:01] 2025-10-13 19:19:00,032 [wrapper] Pilot exit status: 0
[2025-10-13 15:19:01] 2025-10-13 19:19:00,134 [wrapper] pandaids: 6842305420
[2025-10-13 15:19:01] 2025-10-13 19:19:00,345 [wrapper] cleanup supervisor_pilot 2372436 1709130
[2025-10-13 15:19:01] 2025-10-13 19:19:00,349 [wrapper] Test setup, not cleaning
[2025-10-13 15:19:01] 2025-10-13 19:19:00,352 [wrapper] apfmon messages muted
[2025-10-13 15:19:01] 2025-10-13 19:19:00,355 [wrapper] ==== wrapper stdout END ====
[2025-10-13 15:19:01] 2025-10-13 19:19:00,359 [wrapper] ==== wrapper stderr END ====
[2025-10-13 15:19:01]  *** Error codes and diagnostics ***
[2025-10-13 15:19:01]     "exeErrorCode": 0,
[2025-10-13 15:19:01]     "exeErrorDiag": "",
[2025-10-13 15:19:01]     "pilotErrorCode": 0,
[2025-10-13 15:19:01]     "pilotErrorDiag": "",
[2025-10-13 15:19:01]  *** Listing of results directory ***
[2025-10-13 15:19:01] total 413188
[2025-10-13 15:19:01] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 23:15 pilot3.tar.gz
[2025-10-13 15:19:01] -rwx------. 1 boincer umatlas     36292 Oct 12 23:38 runpilot2-wrapper.sh
[2025-10-13 15:19:01] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 23:38 queuedata.json
[2025-10-13 15:19:01] -rw-r--r--. 1 boincer umatlas       100 Oct 13 07:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 15:19:01] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 07:03 run_atlas
[2025-10-13 15:19:01] -rw-r--r--. 1 boincer umatlas       105 Oct 13 07:03 job.xml
[2025-10-13 15:19:01] -rw-r--r--. 2 boincer umatlas 219538376 Oct 13 07:03 EVNT.46676267._002588.pool.root.1
[2025-10-13 15:19:01] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 07:03 start_atlas.sh
[2025-10-13 15:19:01] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 07:03 shared
[2025-10-13 15:19:01] -rw-r--r--. 2 boincer umatlas    569681 Oct 13 07:03 input.tar.gz
[2025-10-13 15:19:01] -rw-r--r--. 1 boincer umatlas         0 Oct 13 07:03 boinc_lockfile
[2025-10-13 15:19:01] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 07:04 pandaJob.out
[2025-10-13 15:19:01] -rw-------. 1 boincer umatlas    972497 Oct 13 07:04 agis_schedconf.cvmfs.json
[2025-10-13 15:19:01] drwx------. 5 boincer umatlas      4096 Oct 13 07:04 pilot3
[2025-10-13 15:19:01] -rw-r--r--. 1 boincer umatlas      6660 Oct 13 15:13 init_data.xml
[2025-10-13 15:19:01] -rw-------. 1 boincer umatlas 190721350 Oct 13 15:17 HITS.46676269._096052.pool.root.1
[2025-10-13 15:19:01] -rw-r--r--. 1 boincer umatlas       531 Oct 13 15:17 boinc_task_state.xml
[2025-10-13 15:19:01] -rw-------. 1 boincer umatlas      1044 Oct 13 15:17 memory_monitor_summary.json
[2025-10-13 15:19:01] -rw-------. 1 boincer umatlas   1560580 Oct 13 15:18 agis_ddmendpoints.agis.ALL.json
[2025-10-13 15:19:01] -rw-------. 1 boincer umatlas    651142 Oct 13 15:18 log.46676269._096052.job.log.tgz.1
[2025-10-13 15:19:01] -rw-------. 1 boincer umatlas        95 Oct 13 15:18 pilot_heartbeat.json
[2025-10-13 15:19:01] -rw-------. 1 boincer umatlas      7827 Oct 13 15:18 heartbeat.json
[2025-10-13 15:19:01] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 15:18 boinc_mmap_file
[2025-10-13 15:19:01] -rw-r--r--. 1 boincer umatlas        28 Oct 13 15:18 wrapper_checkpoint.txt
[2025-10-13 15:19:01] -rw-------. 1 boincer umatlas       822 Oct 13 15:18 pilotlog.txt
[2025-10-13 15:19:01] -rw-------. 1 boincer umatlas   3823827 Oct 13 15:19 log.46676269._096052.job.log.1
[2025-10-13 15:19:01] -rw-------. 1 boincer umatlas       357 Oct 13 15:19 output.list
[2025-10-13 15:19:01] -rw-r--r--. 1 boincer umatlas       620 Oct 13 15:19 runtime_log
[2025-10-13 15:19:01] -rw-------. 1 boincer umatlas   4495360 Oct 13 15:19 result.tar.gz
[2025-10-13 15:19:01] -rw-------. 1 boincer umatlas       657 Oct 13 15:19 zQeMDmjZOS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmOfVMDmU2PVon.diag
[2025-10-13 15:19:01] -rw-r--r--. 1 boincer umatlas      8699 Oct 13 15:19 runtime_log.err
[2025-10-13 15:19:01] -rw-r--r--. 1 boincer umatlas     21564 Oct 13 15:19 stderr.txt
[2025-10-13 15:19:01] HITS file was successfully produced:
[2025-10-13 15:19:01] -rw-------. 1 boincer umatlas 190721350 Oct 13 15:17 shared/HITS.pool.root.1
[2025-10-13 15:19:01]  *** Contents of shared directory: ***
[2025-10-13 15:19:01] total 405620
[2025-10-13 15:19:01] -rw-r--r--. 2 boincer umatlas 219538376 Oct 13 07:03 ATLAS.root_0
[2025-10-13 15:19:01] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 07:03 start_atlas.sh
[2025-10-13 15:19:01] -rw-r--r--. 2 boincer umatlas    569681 Oct 13 07:03 input.tar.gz
[2025-10-13 15:19:01] -rw-------. 1 boincer umatlas 190721350 Oct 13 15:17 HITS.pool.root.1
[2025-10-13 15:19:01] -rw-------. 1 boincer umatlas   4495360 Oct 13 15:19 result.tar.gz
15:19:03 (1704987): run_atlas exited; CPU time 55414.992978
15:19:03 (1704987): called boinc_finish(0)

</stderr_txt>
]]>

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