Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
10:29:12 (2483041): wrapper (7.7.26015): starting
10:29:12 (2483041): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 10:29:12] Arguments: --nthreads 12
[2025-10-13 10:29:12] Threads: 12
[2025-10-13 10:29:12] Checking for CVMFS
[2025-10-13 10:29:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 10:29:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 10:29:12] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 10:29:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 10:29:13] 2.11.0.0 3299214 4383 90984 151658 0 188 5542472 6144000 14451 130560 0 86125407 100.000 158259 169 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-10-13 10:29:13] CVMFS is ok
[2025-10-13 10:29:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 10:29:13] Checking for apptainer binary...
[2025-10-13 10:29:13] apptainer is not installed, using version from CVMFS
[2025-10-13 10:29:13] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 10:29:13] radiat0r
[2025-10-13 10:29:13] apptainer works
[2025-10-13 10:29:13] Set ATHENA_PROC_NUMBER=12
[2025-10-13 10:29:13] Set ATHENA_CORE_NUMBER=12
[2025-10-13 10:29:13] Starting ATLAS job with PandaID=6841677961
[2025-10-13 10:29:13] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 11:21:39]  *** The last 200 lines of the pilot log: ***
[2025-10-13 11:21:39]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c8/aa/log.46676269._095400.job.log.tgz.1
[2025-10-13 11:21:39]  workdir=None
[2025-10-13 11:21:39] ]
[2025-10-13 11:21:39] 2025-10-13 11:20:32,378 | INFO     | transferring file log.46676269._095400.job.log.tgz.1 from /var/lib/boinc/slots/4/PanDA_Pilot-6841677961/log.46676269._095400.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-13 11:21:39] 2025-10-13 11:20:32,378 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/4/PanDA_Pilot-6841677961/log.46676269._095400.job.log.tgz.1 /var/lib/boinc/slots/4/log.46676269._095400.job
[2025-10-13 11:21:39] 2025-10-13 11:20:32,400 | INFO     | adding to output.list: log.46676269._095400.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c8/aa/log.46676269._095400.job.log.tg
[2025-10-13 11:21:39] 2025-10-13 11:20:32,400 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 11:21:39] 2025-10-13 11:20:32,400 | INFO     | summary of transferred files:
[2025-10-13 11:21:39] 2025-10-13 11:20:32,401 | INFO     |  -- lfn=log.46676269._095400.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 11:21:39] 2025-10-13 11:20:32,401 | INFO     | stage-out finished correctly
[2025-10-13 11:21:39] 2025-10-13 11:20:32,830 | INFO     | time since job start (3062s) is within the limit (172800.0s)
[2025-10-13 11:21:39] 2025-10-13 11:20:33,064 | INFO     | monitor loop #215: job 0:6841677961 is in state 'finished'
[2025-10-13 11:21:39] 2025-10-13 11:20:33,065 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 11:21:39] 2025-10-13 11:20:34,188 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 11:21:39] 2025-10-13 11:20:34,836 | INFO     | time since job start (3064s) is within the limit (172800.0s)
[2025-10-13 11:21:39] 2025-10-13 11:20:35,566 | INFO     | monitor loop #216: job 0:6841677961 is in state 'finished'
[2025-10-13 11:21:39] 2025-10-13 11:20:35,567 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 11:21:39] 2025-10-13 11:20:36,367 | INFO     | job 6841677961 has state=finished
[2025-10-13 11:21:39] 2025-10-13 11:20:36,369 | INFO     | preparing for final server update for job 6841677961 in state='finished'
[2025-10-13 11:21:39] 2025-10-13 11:20:36,370 | INFO     | this job has now completed (state=finished)
[2025-10-13 11:21:39] 2025-10-13 11:20:36,370 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 11:21:39] 2025-10-13 11:20:36,370 | INFO     | log transfer has been attempted: DONE
[2025-10-13 11:21:39] 2025-10-13 11:20:36,370 | INFO     | job 6841677961 has finished - writing final server update
[2025-10-13 11:21:39] 2025-10-13 11:20:36,371 | INFO     | total number of processed events: 400 (read)
[2025-10-13 11:21:39] 2025-10-13 11:20:36,373 | INFO     | executing command: lscpu
[2025-10-13 11:21:39] 2025-10-13 11:20:36,557 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 11:21:39] 2025-10-13 11:20:36,842 | INFO     | time since job start (3066s) is within the limit (172800.0s)
[2025-10-13 11:21:39] 2025-10-13 11:20:38,069 | INFO     | monitor loop #217: job 0:6841677961 is in state 'finished'
[2025-10-13 11:21:39] 2025-10-13 11:20:38,070 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 11:21:39] 2025-10-13 11:20:38,847 | INFO     | time since job start (3068s) is within the limit (172800.0s)
[2025-10-13 11:21:39] 2025-10-13 11:20:40,573 | INFO     | monitor loop #218: job 0:6841677961 is in state 'finished'
[2025-10-13 11:21:39] 2025-10-13 11:20:40,573 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 11:21:39] 2025-10-13 11:20:40,851 | INFO     | time since job start (3070s) is within the limit (172800.0s)
[2025-10-13 11:21:39] 2025-10-13 11:20:42,855 | INFO     | time since job start (3072s) is within the limit (172800.0s)
[2025-10-13 11:21:39] 2025-10-13 11:20:42,984 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 11:21:39] 2025-10-13 11:20:43,044 | INFO     | found 128 cores (64 cores per socket, 2 sockets) HT, CPU MHz: 2282.5304843749987
[2025-10-13 11:21:39] 2025-10-13 11:20:43,076 | INFO     | monitor loop #219: job 0:6841677961 is in state 'finished'
[2025-10-13 11:21:39] 2025-10-13 11:20:43,077 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 11:21:39] 2025-10-13 11:20:43,115 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6841677961/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 11:21:39] 2025-10-13 11:20:43,116 | INFO     | extracted standard info from prmon json
[2025-10-13 11:21:39] 2025-10-13 11:20:43,116 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 11:21:39] 2025-10-13 11:20:43,116 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 11:21:39] 2025-10-13 11:20:43,116 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 11:21:39] 2025-10-13 11:20:43,117 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 11:21:39] 2025-10-13 11:20:43,118 | INFO     | fitting pss+swap vs Time
[2025-10-13 11:21:39] 2025-10-13 11:20:43,118 | INFO     | sum of square deviations: 24640462.0
[2025-10-13 11:21:39] 2025-10-13 11:20:43,119 | INFO     | sum of deviations: -81348502.0
[2025-10-13 11:21:39] 2025-10-13 11:20:43,119 | INFO     | mean x: 1760352990.0
[2025-10-13 11:21:39] 2025-10-13 11:20:43,119 | INFO     | mean y: 2676014.8139534886
[2025-10-13 11:21:39] 2025-10-13 11:20:43,119 | INFO     | -- intersect: 5814339721.757475
[2025-10-13 11:21:39] 2025-10-13 11:20:43,119 | INFO     | intersect: 5814339721.757475
[2025-10-13 11:21:39] 2025-10-13 11:20:43,119 | INFO     | chi2: 0.00152212554135963
[2025-10-13 11:21:39] 2025-10-13 11:20:43,119 | INFO     | -- intersect: 5814339721.757475
[2025-10-13 11:21:39] 2025-10-13 11:20:43,119 | INFO     | current memory leak: -3.30 B/s (using 43 data points, chi2=0.00)
[2025-10-13 11:21:39] 2025-10-13 11:20:43,120 | INFO     | could have reported an average CPU frequency of 2349 MHz (5 samples)
[2025-10-13 11:21:39] 2025-10-13 11:20:43,120 | INFO     | ..............................
[2025-10-13 11:21:39] 2025-10-13 11:20:43,120 | INFO     | . Timing measurements:
[2025-10-13 11:21:39] 2025-10-13 11:20:43,120 | INFO     | . get job = 0 s
[2025-10-13 11:21:39] 2025-10-13 11:20:43,120 | INFO     | . initial setup = 3 s
[2025-10-13 11:21:39] 2025-10-13 11:20:43,120 | INFO     | . payload setup = 8 s
[2025-10-13 11:21:39] 2025-10-13 11:20:43,120 | INFO     | . stage-in = 0 s
[2025-10-13 11:21:39] 2025-10-13 11:20:43,120 | INFO     | . payload execution = 3030 s
[2025-10-13 11:21:39] 2025-10-13 11:20:43,121 | INFO     | . stage-out = 0 s
[2025-10-13 11:21:39] 2025-10-13 11:20:43,121 | INFO     | . log creation = 0 s
[2025-10-13 11:21:39] 2025-10-13 11:20:43,121 | INFO     | ..............................
[2025-10-13 11:21:39] 2025-10-13 11:20:43,218 | INFO     | 
[2025-10-13 11:21:39] 2025-10-13 11:20:43,218 | INFO     | job summary report
[2025-10-13 11:21:39] 2025-10-13 11:20:43,218 | INFO     | --------------------------------------------------
[2025-10-13 11:21:39] 2025-10-13 11:20:43,218 | INFO     | PanDA job id: 6841677961
[2025-10-13 11:21:39] 2025-10-13 11:20:43,218 | INFO     | task id: 46676269
[2025-10-13 11:21:39] 2025-10-13 11:20:43,218 | INFO     | errors: (none)
[2025-10-13 11:21:39] 2025-10-13 11:20:43,218 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 11:21:39] 2025-10-13 11:20:43,219 | INFO     | pilot state: finished 
[2025-10-13 11:21:39] 2025-10-13 11:20:43,219 | INFO     | transexitcode: 0
[2025-10-13 11:21:39] 2025-10-13 11:20:43,219 | INFO     | exeerrorcode: 0
[2025-10-13 11:21:39] 2025-10-13 11:20:43,219 | INFO     | exeerrordiag: 
[2025-10-13 11:21:39] 2025-10-13 11:20:43,219 | INFO     | exitcode: 0
[2025-10-13 11:21:39] 2025-10-13 11:20:43,219 | INFO     | exitmsg: OK
[2025-10-13 11:21:39] 2025-10-13 11:20:43,219 | INFO     | cpuconsumptiontime: 32064 s
[2025-10-13 11:21:39] 2025-10-13 11:20:43,219 | INFO     | nevents: 400
[2025-10-13 11:21:39] 2025-10-13 11:20:43,219 | INFO     | neventsw: 0
[2025-10-13 11:21:39] 2025-10-13 11:20:43,219 | INFO     | pid: 2495933
[2025-10-13 11:21:39] 2025-10-13 11:20:43,219 | INFO     | pgrp: 2495933
[2025-10-13 11:21:39] 2025-10-13 11:20:43,219 | INFO     | corecount: 12
[2025-10-13 11:21:39] 2025-10-13 11:20:43,219 | INFO     | event service: False
[2025-10-13 11:21:39] 2025-10-13 11:20:43,220 | INFO     | sizes: {0: 2348807, 7: 2349069, 11: 2349097, 3042: 2374516, 3043: 2374515, 3044: 2383569, 3046: 2383753, 3055: 2383979}
[2025-10-13 11:21:39] 2025-10-13 11:20:43,220 | INFO     | --------------------------------------------------
[2025-10-13 11:21:39] 2025-10-13 11:20:43,220 | INFO     | 
[2025-10-13 11:21:39] 2025-10-13 11:20:43,220 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-10-13 11:21:39] 2025-10-13 11:20:43,250 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 11:21:39] 2025-10-13 11:20:43,250 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 11:21:39] 2025-10-13 11:20:43,251 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 11:21:39] 2025-10-13 11:20:43,251 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 11:21:39] 2025-10-13 11:20:43,251 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 11:21:39] 2025-10-13 11:20:43,251 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 11:21:39] 2025-10-13 11:20:43,251 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 11:21:39] 2025-10-13 11:20:43,251 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 11:21:39] 2025-10-13 11:20:43,251 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 11:21:39] 2025-10-13 11:20:43,251 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 11:21:39] 2025-10-13 11:20:43,251 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 11:21:39] 2025-10-13 11:20:43,251 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 11:21:39] 2025-10-13 11:20:43,252 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 11:21:39] 2025-10-13 11:20:43,252 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 11:21:39] 2025-10-13 11:20:43,252 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 11:21:39] 2025-10-13 11:20:43,252 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 11:21:39] 2025-10-13 11:20:43,252 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 11:21:39] 2025-10-13 11:20:43,252 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 11:21:39] 2025-10-13 11:20:43,252 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 11:21:39] 2025-10-13 11:20:43,252 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 11:21:39] 2025-10-13 11:20:43,252 | INFO     | job 6841677961 has completed (purged errors)
[2025-10-13 11:21:39] 2025-10-13 11:20:43,253 | INFO     | overall cleanup function is called
[2025-10-13 11:21:39] 2025-10-13 11:20:44,263 | INFO     | --- collectZombieJob: --- 10, [2495933]
[2025-10-13 11:21:39] 2025-10-13 11:20:44,263 | INFO     | zombie collector waiting for pid 2495933
[2025-10-13 11:21:39] 2025-10-13 11:20:44,263 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 11:21:39] 2025-10-13 11:20:44,263 | INFO     | collected zombie processes
[2025-10-13 11:21:39] 2025-10-13 11:20:44,264 | INFO     | will attempt to kill all subprocesses of pid=2495933
[2025-10-13 11:21:39] 2025-10-13 11:20:45,062 | INFO     | process IDs to be killed: [2495933] (in reverse order)
[2025-10-13 11:21:39] 2025-10-13 11:20:45,315 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 11:21:39] 2025-10-13 11:20:45,315 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 11:21:39] 2025-10-13 11:20:45,342 | INFO     | did not find any defunct processes belonging to 2495933
[2025-10-13 11:21:39] 2025-10-13 11:20:45,368 | INFO     | did not find any defunct processes belonging to 2495933
[2025-10-13 11:21:39] 2025-10-13 11:20:45,369 | INFO     | ready for new job
[2025-10-13 11:21:39] 2025-10-13 11:20:45,369 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 11:21:39] 2025-10-13 11:20:45,371 | INFO     | ***************************************
[2025-10-13 11:21:39] 2025-10-13 11:20:45,372 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 11:21:39] 2025-10-13 11:20:45,372 | INFO     | ***************************************
[2025-10-13 11:21:39] 2025-10-13 11:20:45,372 | INFO     | 
[2025-10-13 11:21:39] 2025-10-13 11:20:45,409 | INFO     | architecture information:
[2025-10-13 11:21:39] 2025-10-13 11:20:45,410 | INFO     | executing command: cat /etc/os-release
[2025-10-13 11:21:39] 2025-10-13 11:20:45,433 | INFO     | cat /etc/os-release:
[2025-10-13 11:21:39] NAME="CentOS Linux"
[2025-10-13 11:21:39] VERSION="7 (Core)"
[2025-10-13 11:21:39] ID="centos"
[2025-10-13 11:21:39] ID_LIKE="rhel fedora"
[2025-10-13 11:21:39] VERSION_ID="7"
[2025-10-13 11:21:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 11:21:39] ANSI_COLOR="0;31"
[2025-10-13 11:21:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 11:21:39] HOME_URL="https://www.centos.org/"
[2025-10-13 11:21:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 11:21:39] 
[2025-10-13 11:21:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 11:21:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 11:21:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 11:21:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 11:21:39] 
[2025-10-13 11:21:39] 2025-10-13 11:20:45,434 | INFO     | ***************************************
[2025-10-13 11:21:39] 2025-10-13 11:20:45,937 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-10-13 11:21:39] 2025-10-13 11:20:45,967 | INFO     | sufficient remaining disk space (1732207706112 B)
[2025-10-13 11:21:39] 2025-10-13 11:20:45,967 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 11:21:39] 2025-10-13 11:20:45,967 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 11:21:39] 2025-10-13 11:20:45,967 | INFO     | update_server=False
[2025-10-13 11:21:39] 2025-10-13 11:20:45,967 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 11:21:39] 2025-10-13 11:20:45,968 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 11:21:39] 2025-10-13 11:20:46,585 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 11:21:39] 2025-10-13 11:20:46,585 | INFO     | aborting loop
[2025-10-13 11:21:39] 2025-10-13 11:20:46,727 | INFO     | all data control threads have been joined
[2025-10-13 11:21:39] 2025-10-13 11:20:46,970 | INFO     | [job] retrieve thread has finished
[2025-10-13 11:21:39] 2025-10-13 11:20:47,120 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 11:21:39] 2025-10-13 11:20:47,130 | INFO     | [data] copytool_in thread has finished
[2025-10-13 11:21:39] 2025-10-13 11:20:47,138 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 11:21:39] 2025-10-13 11:20:47,393 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 11:21:39] 2025-10-13 11:20:47,437 | INFO     | all payload control threads have been joined
[2025-10-13 11:21:39] 2025-10-13 11:20:47,590 | INFO     | [job] job monitor thread has finished
[2025-10-13 11:21:39] 2025-10-13 11:20:47,663 | INFO     | all job control threads have been joined
[2025-10-13 11:21:39] 2025-10-13 11:20:47,733 | INFO     | [data] control thread has finished
[2025-10-13 11:21:39] 2025-10-13 11:20:47,974 | INFO     | [data] copytool_out thread has finished
[2025-10-13 11:21:39] 2025-10-13 11:20:48,059 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 11:21:39] 2025-10-13 11:20:48,229 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 11:21:39] 2025-10-13 11:20:48,246 | INFO     | [payload] validate_post thread has finished
[2025-10-13 11:21:39] 2025-10-13 11:20:48,306 | INFO     | [payload] failed_post thread has finished
[2025-10-13 11:21:39] 2025-10-13 11:20:48,314 | INFO     | [job] validate thread has finished
[2025-10-13 11:21:39] 2025-10-13 11:20:48,443 | INFO     | [payload] control thread has finished
[2025-10-13 11:21:39] 2025-10-13 11:20:48,667 | INFO     | [job] control thread has finished
[2025-10-13 11:21:39] 2025-10-13 11:20:49,235 | INFO     | [job] queue monitor thread has finished
[2025-10-13 11:21:39] 2025-10-13 11:20:49,293 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 11:21:39] 2025-10-13 11:20:53,298 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 11:21:39] 2025-10-13 11:21:16,857 | INFO     | PID=2487771 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 11:21:39] 2025-10-13 11:21:16,858 | INFO     | .. there are 12 such processes running
[2025-10-13 11:21:39] 2025-10-13 11:21:16,858 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 11:21:39] 2025-10-13 11:21:16,858 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 11:21:39] 2025-10-13 11:21:16,858 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 11:21:39] 2025-10-13 11:21:34,303 | INFO     | [monitor] cgroup control has ended
[2025-10-13 11:21:39] 2025-10-13 11:21:34,465 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140568380688192)>', '<ExcThread(monitor, started 140567493207808)>']
[2025-10-13 11:21:39] 2025-10-13 11:21:34,943 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 11:21:39] 2025-10-13 11:21:34,944 | INFO     | [monitor] control thread has ended
[2025-10-13 11:21:39] 2025-10-13 11:21:39,490 | INFO     | all workflow threads have been joined
[2025-10-13 11:21:39] 2025-10-13 11:21:39,491 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 11:21:39] 2025-10-13 11:21:39,491 | INFO     | traces error code: 0
[2025-10-13 11:21:39] 2025-10-13 11:21:39,491 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 11:21:39] 2025-10-13 11:21:39,657 [wrapper] ==== pilot stdout END ====
[2025-10-13 11:21:39] 2025-10-13 11:21:39,661 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 11:21:39] 2025-10-13 11:21:39,665 [wrapper] pilotpid: 2487771
[2025-10-13 11:21:39] 2025-10-13 11:21:39,668 [wrapper] Pilot exit status: 0
[2025-10-13 11:21:39] 2025-10-13 11:21:39,679 [wrapper] pandaids: 6841677961
[2025-10-13 11:21:39] 2025-10-13 11:21:39,800 [wrapper] cleanup supervisor_pilot 2809374 2487772
[2025-10-13 11:21:39] 2025-10-13 11:21:39,803 [wrapper] Test setup, not cleaning
[2025-10-13 11:21:39] 2025-10-13 11:21:39,805 [wrapper] apfmon messages muted
[2025-10-13 11:21:39] 2025-10-13 11:21:39,808 [wrapper] ==== wrapper stdout END ====
[2025-10-13 11:21:39] 2025-10-13 11:21:39,810 [wrapper] ==== wrapper stderr END ====
[2025-10-13 11:21:39]  *** Error codes and diagnostics ***
[2025-10-13 11:21:39]     "exeErrorCode": 0,
[2025-10-13 11:21:39]     "exeErrorDiag": "",
[2025-10-13 11:21:39]     "pilotErrorCode": 0,
[2025-10-13 11:21:39]     "pilotErrorDiag": "",
[2025-10-13 11:21:39]  *** Listing of results directory ***
[2025-10-13 11:21:39] total 409936
[2025-10-13 11:21:39] -rw-r--r-- 1 boinc boinc    557409 Oct 13 02:00 pilot3.tar.gz
[2025-10-13 11:21:39] -rw-r--r-- 1 boinc boinc      5112 Oct 13 02:58 queuedata.json
[2025-10-13 11:21:39] -rwx------ 1 boinc boinc     36292 Oct 13 03:00 runpilot2-wrapper.sh
[2025-10-13 11:21:39] -rw-r--r-- 1 boinc boinc       100 Oct 13 10:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 11:21:39] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 10:29 run_atlas
[2025-10-13 11:21:39] -rw-r--r-- 1 boinc boinc       105 Oct 13 10:29 job.xml
[2025-10-13 11:21:39] -rw-r--r-- 2 boinc boinc 218990277 Oct 13 10:29 EVNT.46676267._003140.pool.root.1
[2025-10-13 11:21:39] -rw-r--r-- 2 boinc boinc     15120 Oct 13 10:29 start_atlas.sh
[2025-10-13 11:21:39] drwxrwx--x 2 boinc boinc      4096 Oct 13 10:29 shared
[2025-10-13 11:21:39] -rw-r--r-- 2 boinc boinc    569686 Oct 13 10:29 input.tar.gz
[2025-10-13 11:21:39] -rw-r--r-- 1 boinc boinc      9396 Oct 13 10:29 init_data.xml
[2025-10-13 11:21:39] -rw-r--r-- 1 boinc boinc         0 Oct 13 10:29 boinc_setup_complete
[2025-10-13 11:21:39] -rw-r--r-- 1 boinc boinc         0 Oct 13 10:29 boinc_lockfile
[2025-10-13 11:21:39] -rw-r--r-- 1 boinc boinc      2550 Oct 13 10:29 pandaJob.out
[2025-10-13 11:21:39] -rw------- 1 boinc boinc    972497 Oct 13 10:29 agis_schedconf.cvmfs.json
[2025-10-13 11:21:39] -rw------- 1 boinc boinc   1560580 Oct 13 10:29 agis_ddmendpoints.agis.ALL.json
[2025-10-13 11:21:39] drwx------ 5 boinc boinc      4096 Oct 13 10:29 pilot3
[2025-10-13 11:21:39] -rw------- 1 boinc boinc 195209487 Oct 13 11:19 HITS.46676269._095400.pool.root.1
[2025-10-13 11:21:39] -rw-r--r-- 1 boinc boinc       530 Oct 13 11:20 boinc_task_state.xml
[2025-10-13 11:21:39] -rw------- 1 boinc boinc        95 Oct 13 11:20 pilot_heartbeat.json
[2025-10-13 11:21:39] -rw------- 1 boinc boinc      1038 Oct 13 11:20 memory_monitor_summary.json
[2025-10-13 11:21:39] -rw------- 1 boinc boinc    378145 Oct 13 11:20 log.46676269._095400.job.log.tgz.1
[2025-10-13 11:21:39] -rw------- 1 boinc boinc      7740 Oct 13 11:20 heartbeat.json
[2025-10-13 11:21:39] -rw-r--r-- 1 boinc boinc        27 Oct 13 11:21 wrapper_checkpoint.txt
[2025-10-13 11:21:39] -rw-r--r-- 1 boinc boinc      8192 Oct 13 11:21 boinc_mmap_file
[2025-10-13 11:21:39] -rw------- 1 boinc boinc      4826 Oct 13 11:21 pilotlog.txt
[2025-10-13 11:21:39] -rw------- 1 boinc boinc    456785 Oct 13 11:21 log.46676269._095400.job.log.1
[2025-10-13 11:21:39] -rw------- 1 boinc boinc       357 Oct 13 11:21 output.list
[2025-10-13 11:21:39] -rw-r--r-- 1 boinc boinc       620 Oct 13 11:21 runtime_log
[2025-10-13 11:21:39] -rw------- 1 boinc boinc    849920 Oct 13 11:21 result.tar.gz
[2025-10-13 11:21:39] -rw------- 1 boinc boinc       643 Oct 13 11:21 sbuLDmIyNS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmEZmNDmre1gNm.diag
[2025-10-13 11:21:39] -rw-r--r-- 1 boinc boinc      8658 Oct 13 11:21 runtime_log.err
[2025-10-13 11:21:39] -rw-r--r-- 1 boinc boinc     22025 Oct 13 11:21 stderr.txt
[2025-10-13 11:21:39] HITS file was successfully produced:
[2025-10-13 11:21:39] -rw------- 1 boinc boinc 195209487 Oct 13 11:19 shared/HITS.pool.root.1
[2025-10-13 11:21:39]  *** Contents of shared directory: ***
[2025-10-13 11:21:39] total 405912
[2025-10-13 11:21:39] -rw-r--r-- 2 boinc boinc 218990277 Oct 13 10:29 ATLAS.root_0
[2025-10-13 11:21:39] -rw-r--r-- 2 boinc boinc     15120 Oct 13 10:29 start_atlas.sh
[2025-10-13 11:21:39] -rw-r--r-- 2 boinc boinc    569686 Oct 13 10:29 input.tar.gz
[2025-10-13 11:21:39] -rw------- 1 boinc boinc 195209487 Oct 13 11:19 HITS.pool.root.1
[2025-10-13 11:21:39] -rw------- 1 boinc boinc    849920 Oct 13 11:21 result.tar.gz
11:21:41 (2483041): run_atlas exited; CPU time 32258.650245
11:21:41 (2483041): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN