Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:46:58 (3846970): wrapper (7.7.26015): starting
05:46:58 (3846970): wrapper: running run_atlas (--nthreads 9)
[2025-10-13 05:46:58] Arguments: --nthreads 9
[2025-10-13 05:46:58] Threads: 9
[2025-10-13 05:46:58] Checking for CVMFS
[2025-10-13 05:46:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 05:46:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 05:46:58] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 05:46:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 05:46:58] 2.13.2.0 5386 44117 284984 151656 0 353 19675031 32935937 19810 16776704 0 105196819 99.633 98750404 29630 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 05:46:58] CVMFS is ok
[2025-10-13 05:46:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 05:46:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 05:46:58] Further information can be found at the LHC@home message board.
[2025-10-13 05:46:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 05:46:58] Checking for apptainer binary...
[2025-10-13 05:46:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 05:46:58] Running /usr/bin/apptainer --version
[2025-10-13 05:46:58] apptainer version 1.4.3-1.el9
[2025-10-13 05:46:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 05:46:58] c6-1-26-4.aglt2.org
[2025-10-13 05:46:58] apptainer works
[2025-10-13 05:46:58] Set ATHENA_PROC_NUMBER=9
[2025-10-13 05:46:58] Set ATHENA_CORE_NUMBER=9
[2025-10-13 05:46:58] Starting ATLAS job with PandaID=6842633800
[2025-10-13 05:46:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 09:07:42]  *** The last 200 lines of the pilot log: ***
[2025-10-13 09:07:42] 2025-10-13 13:06:35,132 | INFO     | fitting pss+swap vs Time
[2025-10-13 09:07:42] 2025-10-13 13:06:35,133 | INFO     | sum of square deviations: 2334752889.7754984
[2025-10-13 09:07:42] 2025-10-13 13:06:35,135 | INFO     | sum of deviations: 26131291046.84695
[2025-10-13 09:07:42] 2025-10-13 13:06:35,135 | INFO     | mean x: 1760354820.6632652
[2025-10-13 09:07:42] 2025-10-13 13:06:35,135 | INFO     | mean y: 2173086.7704081633
[2025-10-13 09:07:42] 2025-10-13 13:06:35,135 | INFO     | -- intersect: -19700273525.8538
[2025-10-13 09:07:42] 2025-10-13 13:06:35,135 | INFO     | intersect: -19700273525.8538
[2025-10-13 09:07:42] 2025-10-13 13:06:35,136 | INFO     | chi2: 2.311482614805344
[2025-10-13 09:07:42] 2025-10-13 13:06:35,136 | INFO     | sum of square deviations: 2160589287.9685774
[2025-10-13 09:07:42] 2025-10-13 13:06:35,137 | INFO     | sum of deviations: 35923528011.63874
[2025-10-13 09:07:42] 2025-10-13 13:06:35,138 | INFO     | mean x: 1760354668.1623037
[2025-10-13 09:07:42] 2025-10-13 13:06:35,138 | INFO     | mean y: 2181458.3664921466
[2025-10-13 09:07:42] 2025-10-13 13:06:35,138 | INFO     | -- intersect: -29266754837.992317
[2025-10-13 09:07:42] 2025-10-13 13:06:35,138 | INFO     | intersect: -29266754837.992317
[2025-10-13 09:07:42] 2025-10-13 13:06:35,138 | INFO     | chi2: 1.6448894369297031
[2025-10-13 09:07:42] 2025-10-13 13:06:35,139 | INFO     | current chi2=1.6448894369297031 (change=28.838338372351384 %)
[2025-10-13 09:07:42] 2025-10-13 13:06:35,139 | INFO     | sum of square deviations: 1995321225.3333373
[2025-10-13 09:07:42] 2025-10-13 13:06:35,140 | INFO     | sum of deviations: 34989531492.99997
[2025-10-13 09:07:42] 2025-10-13 13:06:35,140 | INFO     | mean x: 1760354515.6666667
[2025-10-13 09:07:42] 2025-10-13 13:06:35,140 | INFO     | mean y: 2180599.129032258
[2025-10-13 09:07:42] 2025-10-13 13:06:35,141 | INFO     | -- intersect: -30867024310.207653
[2025-10-13 09:07:42] 2025-10-13 13:06:35,141 | INFO     | intersect: -30867024310.207653
[2025-10-13 09:07:42] 2025-10-13 13:06:35,141 | INFO     | chi2: 1.6448590491481612
[2025-10-13 09:07:42] 2025-10-13 13:06:35,141 | INFO     | current chi2=1.6448590491481612 (change=0.0018474057197840424 %)
[2025-10-13 09:07:42] 2025-10-13 13:06:35,141 | INFO     | right removable region: 185
[2025-10-13 09:07:42] 2025-10-13 13:06:35,142 | INFO     | sum of square deviations: 2160581724.6387534
[2025-10-13 09:07:42] 2025-10-13 13:06:35,143 | INFO     | sum of deviations: -3824518017.837694
[2025-10-13 09:07:42] 2025-10-13 13:06:35,143 | INFO     | mean x: 1760354973.1675394
[2025-10-13 09:07:42] 2025-10-13 13:06:35,143 | INFO     | mean y: 2199093.0261780103
[2025-10-13 09:07:42] 2025-10-13 13:06:35,143 | INFO     | -- intersect: 3118262343.906036
[2025-10-13 09:07:42] 2025-10-13 13:06:35,144 | INFO     | intersect: 3118262343.906036
[2025-10-13 09:07:42] 2025-10-13 13:06:35,144 | INFO     | chi2: 0.7947125327722031
[2025-10-13 09:07:42] 2025-10-13 13:06:35,144 | INFO     | current chi2=0.7947125327722031 (change=65.6189266714806 %)
[2025-10-13 09:07:42] 2025-10-13 13:06:35,145 | INFO     | sum of square deviations: 1995294446.994619
[2025-10-13 09:07:42] 2025-10-13 13:06:35,146 | INFO     | sum of deviations: -3736182058.666666
[2025-10-13 09:07:42] 2025-10-13 13:06:35,146 | INFO     | mean x: 1760355125.672043
[2025-10-13 09:07:42] 2025-10-13 13:06:35,146 | INFO     | mean y: 2199006.3333333335
[2025-10-13 09:07:42] 2025-10-13 13:06:35,146 | INFO     | -- intersect: 3298457985.715703
[2025-10-13 09:07:42] 2025-10-13 13:06:35,146 | INFO     | intersect: 3298457985.715703
[2025-10-13 09:07:42] 2025-10-13 13:06:35,147 | INFO     | chi2: 0.7934379703562319
[2025-10-13 09:07:42] 2025-10-13 13:06:35,147 | INFO     | current chi2=0.7934379703562319 (change=0.16038030903138883 %)
[2025-10-13 09:07:42] 2025-10-13 13:06:35,147 | INFO     | left removable region: 20
[2025-10-13 09:07:42] 2025-10-13 13:06:35,147 | INFO     | sum of square deviations: 1392883303.1757565
[2025-10-13 09:07:42] 2025-10-13 13:06:35,148 | INFO     | sum of deviations: 11887644329.951523
[2025-10-13 09:07:42] 2025-10-13 13:06:35,149 | INFO     | mean x: 1760355095.1878788
[2025-10-13 09:07:42] 2025-10-13 13:06:35,149 | INFO     | mean y: 2201810.775757576
[2025-10-13 09:07:42] 2025-10-13 13:06:35,149 | INFO     | -- intersect: -15021652103.115923
[2025-10-13 09:07:42] 2025-10-13 13:06:35,149 | INFO     | intersect: -15021652103.115923
[2025-10-13 09:07:42] 2025-10-13 13:06:35,149 | INFO     | chi2: 0.06220169536797637
[2025-10-13 09:07:42] 2025-10-13 13:06:35,150 | INFO     | -- intersect: -15021652103.115923
[2025-10-13 09:07:42] 2025-10-13 13:06:35,150 | INFO     | current memory leak: 8.53 B/s (using 165 data points, chi2=0.06)
[2025-10-13 09:07:42] 2025-10-13 13:06:35,150 | INFO     | could have reported an average CPU frequency of 2750 MHz (10 samples)
[2025-10-13 09:07:42] 2025-10-13 13:06:35,150 | INFO     | ..............................
[2025-10-13 09:07:42] 2025-10-13 13:06:35,151 | INFO     | . Timing measurements:
[2025-10-13 09:07:42] 2025-10-13 13:06:35,151 | INFO     | . get job = 0 s
[2025-10-13 09:07:42] 2025-10-13 13:06:35,151 | INFO     | . initial setup = 3 s
[2025-10-13 09:07:42] 2025-10-13 13:06:35,151 | INFO     | . payload setup = 9 s
[2025-10-13 09:07:42] 2025-10-13 13:06:35,151 | INFO     | . stage-in = 0 s
[2025-10-13 09:07:42] 2025-10-13 13:06:35,151 | INFO     | . payload execution = 11908 s
[2025-10-13 09:07:42] 2025-10-13 13:06:35,151 | INFO     | . stage-out = 2 s
[2025-10-13 09:07:42] 2025-10-13 13:06:35,151 | INFO     | . log creation = 0 s
[2025-10-13 09:07:42] 2025-10-13 13:06:35,151 | INFO     | ..............................
[2025-10-13 09:07:42] 2025-10-13 13:06:35,277 | INFO     | 
[2025-10-13 09:07:42] 2025-10-13 13:06:35,277 | INFO     | job summary report
[2025-10-13 09:07:42] 2025-10-13 13:06:35,277 | INFO     | --------------------------------------------------
[2025-10-13 09:07:42] 2025-10-13 13:06:35,277 | INFO     | PanDA job id: 6842633800
[2025-10-13 09:07:42] 2025-10-13 13:06:35,277 | INFO     | task id: 46676269
[2025-10-13 09:07:42] 2025-10-13 13:06:35,277 | INFO     | errors: (none)
[2025-10-13 09:07:42] 2025-10-13 13:06:35,277 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 09:07:42] 2025-10-13 13:06:35,277 | INFO     | pilot state: finished 
[2025-10-13 09:07:42] 2025-10-13 13:06:35,277 | INFO     | transexitcode: 0
[2025-10-13 09:07:42] 2025-10-13 13:06:35,278 | INFO     | exeerrorcode: 0
[2025-10-13 09:07:42] 2025-10-13 13:06:35,278 | INFO     | exeerrordiag: 
[2025-10-13 09:07:42] 2025-10-13 13:06:35,278 | INFO     | exitcode: 0
[2025-10-13 09:07:42] 2025-10-13 13:06:35,278 | INFO     | exitmsg: OK
[2025-10-13 09:07:42] 2025-10-13 13:06:35,278 | INFO     | cpuconsumptiontime: 43669 s
[2025-10-13 09:07:42] 2025-10-13 13:06:35,278 | INFO     | nevents: 400
[2025-10-13 09:07:42] 2025-10-13 13:06:35,278 | INFO     | neventsw: 0
[2025-10-13 09:07:42] 2025-10-13 13:06:35,278 | INFO     | pid: 3857832
[2025-10-13 09:07:42] 2025-10-13 13:06:35,278 | INFO     | pgrp: 3857832
[2025-10-13 09:07:42] 2025-10-13 13:06:35,278 | INFO     | corecount: 9
[2025-10-13 09:07:42] 2025-10-13 13:06:35,278 | INFO     | event service: False
[2025-10-13 09:07:42] 2025-10-13 13:06:35,279 | INFO     | sizes: {0: 2347978, 1: 2348834, 2: 2348834, 7: 2349124, 12: 2349152, 11920: 2378664, 11921: 2378791, 11925: 2387845, 11927: 2388121, 11940: 2388315}
[2025-10-13 09:07:42] 2025-10-13 13:06:35,279 | INFO     | --------------------------------------------------
[2025-10-13 09:07:42] 2025-10-13 13:06:35,279 | INFO     | 
[2025-10-13 09:07:42] 2025-10-13 13:06:35,279 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-13 09:07:42] 2025-10-13 13:06:35,378 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 09:07:42] 2025-10-13 13:06:35,378 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 09:07:42] 2025-10-13 13:06:35,378 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 09:07:42] 2025-10-13 13:06:35,378 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 09:07:42] 2025-10-13 13:06:35,379 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 09:07:42] 2025-10-13 13:06:35,379 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 09:07:42] 2025-10-13 13:06:35,379 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 09:07:42] 2025-10-13 13:06:35,379 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 09:07:42] 2025-10-13 13:06:35,379 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 09:07:42] 2025-10-13 13:06:35,379 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 09:07:42] 2025-10-13 13:06:35,379 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 09:07:42] 2025-10-13 13:06:35,379 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 09:07:42] 2025-10-13 13:06:35,379 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 09:07:42] 2025-10-13 13:06:35,380 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 09:07:42] 2025-10-13 13:06:35,380 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 09:07:42] 2025-10-13 13:06:35,380 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 09:07:42] 2025-10-13 13:06:35,380 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 09:07:42] 2025-10-13 13:06:35,380 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 09:07:42] 2025-10-13 13:06:35,380 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 09:07:42] 2025-10-13 13:06:35,380 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 09:07:42] 2025-10-13 13:06:35,380 | INFO     | job 6842633800 has completed (purged errors)
[2025-10-13 09:07:42] 2025-10-13 13:06:35,381 | INFO     | overall cleanup function is called
[2025-10-13 09:07:42] 2025-10-13 13:06:36,390 | INFO     | --- collectZombieJob: --- 10, [3857832]
[2025-10-13 09:07:42] 2025-10-13 13:06:36,390 | INFO     | zombie collector waiting for pid 3857832
[2025-10-13 09:07:42] 2025-10-13 13:06:36,390 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 09:07:42] 2025-10-13 13:06:36,390 | INFO     | collected zombie processes
[2025-10-13 09:07:42] 2025-10-13 13:06:36,390 | INFO     | will attempt to kill all subprocesses of pid=3857832
[2025-10-13 09:07:42] 2025-10-13 13:06:36,874 | INFO     | process IDs to be killed: [3857832] (in reverse order)
[2025-10-13 09:07:42] 2025-10-13 13:06:36,993 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 09:07:42] 2025-10-13 13:06:36,994 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 09:07:42] 2025-10-13 13:06:37,016 | INFO     | did not find any defunct processes belonging to 3857832
[2025-10-13 09:07:42] 2025-10-13 13:06:37,026 | INFO     | did not find any defunct processes belonging to 3857832
[2025-10-13 09:07:42] 2025-10-13 13:06:37,027 | INFO     | ready for new job
[2025-10-13 09:07:42] 2025-10-13 13:06:37,027 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 09:07:42] 2025-10-13 13:06:37,029 | INFO     | ***************************************
[2025-10-13 09:07:42] 2025-10-13 13:06:37,029 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 09:07:42] 2025-10-13 13:06:37,029 | INFO     | ***************************************
[2025-10-13 09:07:42] 2025-10-13 13:06:37,029 | INFO     | 
[2025-10-13 09:07:42] 2025-10-13 13:06:37,047 | INFO     | architecture information:
[2025-10-13 09:07:42] 2025-10-13 13:06:37,057 | INFO     | executing command: cat /etc/os-release
[2025-10-13 09:07:42] 2025-10-13 13:06:37,167 | INFO     | cat /etc/os-release:
[2025-10-13 09:07:42] NAME="CentOS Linux"
[2025-10-13 09:07:42] VERSION="7 (Core)"
[2025-10-13 09:07:42] ID="centos"
[2025-10-13 09:07:42] ID_LIKE="rhel fedora"
[2025-10-13 09:07:42] VERSION_ID="7"
[2025-10-13 09:07:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 09:07:42] ANSI_COLOR="0;31"
[2025-10-13 09:07:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 09:07:42] HOME_URL="https://www.centos.org/"
[2025-10-13 09:07:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 09:07:42] 
[2025-10-13 09:07:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 09:07:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 09:07:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 09:07:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 09:07:42] 
[2025-10-13 09:07:42] 2025-10-13 13:06:37,167 | INFO     | ***************************************
[2025-10-13 09:07:42] 2025-10-13 13:06:37,671 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-13 09:07:42] 2025-10-13 13:06:37,690 | INFO     | sufficient remaining disk space (75925291008 B)
[2025-10-13 09:07:42] 2025-10-13 13:06:37,691 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 09:07:42] 2025-10-13 13:06:37,691 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 09:07:42] 2025-10-13 13:06:37,691 | INFO     | update_server=False
[2025-10-13 09:07:42] 2025-10-13 13:06:37,691 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 09:07:42] 2025-10-13 13:06:37,691 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 09:07:42] 2025-10-13 13:06:37,925 | INFO     | all data control threads have been joined
[2025-10-13 09:07:42] 2025-10-13 13:06:37,926 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 09:07:42] 2025-10-13 13:06:37,930 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 09:07:42] 2025-10-13 13:06:37,930 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 09:07:42] 2025-10-13 13:06:37,930 | INFO     | will abort loop
[2025-10-13 09:07:42] 2025-10-13 13:06:37,933 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 09:07:42] 2025-10-13 13:06:38,433 | INFO     | all payload control threads have been joined
[2025-10-13 09:07:42] 2025-10-13 13:06:38,696 | INFO     | [job] retrieve thread has finished
[2025-10-13 09:07:42] 2025-10-13 13:06:38,931 | INFO     | [data] control thread has finished
[2025-10-13 09:07:42] 2025-10-13 13:06:38,936 | INFO     | [job] job monitor thread has finished
[2025-10-13 09:07:42] 2025-10-13 13:06:38,984 | INFO     | [job] validate thread has finished
[2025-10-13 09:07:42] 2025-10-13 13:06:39,031 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 09:07:42] 2025-10-13 13:06:39,057 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 09:07:42] 2025-10-13 13:06:39,175 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 09:07:42] 2025-10-13 13:06:39,262 | INFO     | all job control threads have been joined
[2025-10-13 09:07:42] 2025-10-13 13:06:39,399 | INFO     | [payload] failed_post thread has finished
[2025-10-13 09:07:42] 2025-10-13 13:06:39,439 | INFO     | [payload] control thread has finished
[2025-10-13 09:07:42] 2025-10-13 13:06:39,487 | INFO     | [data] copytool_in thread has finished
[2025-10-13 09:07:42] 2025-10-13 13:06:39,497 | INFO     | [payload] validate_post thread has finished
[2025-10-13 09:07:42] 2025-10-13 13:06:39,941 | INFO     | [data] copytool_out thread has finished
[2025-10-13 09:07:42] 2025-10-13 13:06:40,268 | INFO     | [job] control thread has finished
[2025-10-13 09:07:42] 2025-10-13 13:06:40,292 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 09:07:42] 2025-10-13 13:06:41,298 | INFO     | [job] queue monitor thread has finished
[2025-10-13 09:07:42] 2025-10-13 13:06:41,698 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 09:07:42] 2025-10-13 13:06:47,821 | INFO     | job.realtimelogging is not enabled
[2025-10-13 09:07:42] 2025-10-13 13:06:48,829 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 09:07:42] 2025-10-13 13:07:08,201 | INFO     | PID=3850661 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 09:07:42] 2025-10-13 13:07:08,202 | INFO     | .. there are 13 such processes running
[2025-10-13 09:07:42] 2025-10-13 13:07:08,204 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 09:07:42] 2025-10-13 13:07:08,204 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 09:07:42] 2025-10-13 13:07:08,204 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 09:07:42] 2025-10-13 13:07:35,917 | INFO     | [monitor] cgroup control has ended
[2025-10-13 09:07:42] 2025-10-13 13:07:37,162 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140286318372672)>', '<ExcThread(monitor, started 140285820520192)>']
[2025-10-13 09:07:42] 2025-10-13 13:07:37,370 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 09:07:42] 2025-10-13 13:07:37,371 | INFO     | [monitor] control thread has ended
[2025-10-13 09:07:42] 2025-10-13 13:07:42,189 | INFO     | all workflow threads have been joined
[2025-10-13 09:07:42] 2025-10-13 13:07:42,191 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 09:07:42] 2025-10-13 13:07:42,192 | INFO     | traces error code: 0
[2025-10-13 09:07:42] 2025-10-13 13:07:42,192 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 09:07:42] 2025-10-13 13:07:42,408 [wrapper] ==== pilot stdout END ====
[2025-10-13 09:07:42] 2025-10-13 13:07:42,411 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 09:07:42] 2025-10-13 13:07:42,413 [wrapper] pilotpid: 3850661
[2025-10-13 09:07:42] 2025-10-13 13:07:42,416 [wrapper] Pilot exit status: 0
[2025-10-13 09:07:42] 2025-10-13 13:07:42,435 [wrapper] pandaids: 6842633800
[2025-10-13 09:07:42] 2025-10-13 13:07:42,514 [wrapper] cleanup supervisor_pilot  144621 3850662
[2025-10-13 09:07:42] 2025-10-13 13:07:42,519 [wrapper] Test setup, not cleaning
[2025-10-13 09:07:42] 2025-10-13 13:07:42,523 [wrapper] apfmon messages muted
[2025-10-13 09:07:42] 2025-10-13 13:07:42,528 [wrapper] ==== wrapper stdout END ====
[2025-10-13 09:07:42] 2025-10-13 13:07:42,532 [wrapper] ==== wrapper stderr END ====
[2025-10-13 09:07:42]  *** Error codes and diagnostics ***
[2025-10-13 09:07:42]     "exeErrorCode": 0,
[2025-10-13 09:07:42]     "exeErrorDiag": "",
[2025-10-13 09:07:42]     "pilotErrorCode": 0,
[2025-10-13 09:07:42]     "pilotErrorDiag": "",
[2025-10-13 09:07:42]  *** Listing of results directory ***
[2025-10-13 09:07:42] total 409784
[2025-10-13 09:07:42] -rw-r--r--. 1 boincer umatlas    557409 Oct 13 02:04 pilot3.tar.gz
[2025-10-13 09:07:42] -rwx------. 1 boincer umatlas     36292 Oct 13 02:20 runpilot2-wrapper.sh
[2025-10-13 09:07:42] -rw-r--r--. 1 boincer umatlas      5112 Oct 13 02:20 queuedata.json
[2025-10-13 09:07:42] -rw-r--r--. 1 boincer umatlas       100 Oct 13 05:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 09:07:42] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 05:46 run_atlas
[2025-10-13 09:07:42] -rw-r--r--. 1 boincer umatlas       105 Oct 13 05:46 job.xml
[2025-10-13 09:07:42] -rw-r--r--. 2 boincer umatlas 221964470 Oct 13 05:46 EVNT.46676267._003221.pool.root.1
[2025-10-13 09:07:42] -rw-r--r--. 2 boincer umatlas    569687 Oct 13 05:46 input.tar.gz
[2025-10-13 09:07:42] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 05:46 start_atlas.sh
[2025-10-13 09:07:42] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 05:46 shared
[2025-10-13 09:07:42] -rw-r--r--. 1 boincer umatlas         0 Oct 13 05:46 boinc_lockfile
[2025-10-13 09:07:42] -rw-r--r--. 1 boincer umatlas      2549 Oct 13 05:46 pandaJob.out
[2025-10-13 09:07:42] -rw-------. 1 boincer umatlas    972849 Oct 13 05:47 agis_schedconf.cvmfs.json
[2025-10-13 09:07:42] drwx------. 5 boincer umatlas      4096 Oct 13 05:47 pilot3
[2025-10-13 09:07:42] -rw-r--r--. 1 boincer umatlas      6841 Oct 13 09:03 init_data.xml
[2025-10-13 09:07:42] -rw-------. 1 boincer umatlas 189738466 Oct 13 09:05 HITS.46676269._096391.pool.root.1
[2025-10-13 09:07:42] -rw-r--r--. 1 boincer umatlas       529 Oct 13 09:05 boinc_task_state.xml
[2025-10-13 09:07:42] -rw-------. 1 boincer umatlas      1042 Oct 13 09:06 memory_monitor_summary.json
[2025-10-13 09:07:42] -rw-------. 1 boincer umatlas   1560580 Oct 13 09:06 agis_ddmendpoints.agis.ALL.json
[2025-10-13 09:07:42] -rw-------. 1 boincer umatlas    452682 Oct 13 09:06 log.46676269._096391.job.log.tgz.1
[2025-10-13 09:07:42] -rw-------. 1 boincer umatlas      7828 Oct 13 09:06 heartbeat.json
[2025-10-13 09:07:42] -rw-------. 1 boincer umatlas        95 Oct 13 09:07 pilot_heartbeat.json
[2025-10-13 09:07:42] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 09:07 boinc_mmap_file
[2025-10-13 09:07:42] -rw-r--r--. 1 boincer umatlas        27 Oct 13 09:07 wrapper_checkpoint.txt
[2025-10-13 09:07:42] -rw-------. 1 boincer umatlas      5082 Oct 13 09:07 pilotlog.txt
[2025-10-13 09:07:42] -rw-------. 1 boincer umatlas   1558511 Oct 13 09:07 log.46676269._096391.job.log.1
[2025-10-13 09:07:42] -rw-------. 1 boincer umatlas       357 Oct 13 09:07 output.list
[2025-10-13 09:07:42] -rw-r--r--. 1 boincer umatlas       620 Oct 13 09:07 runtime_log
[2025-10-13 09:07:42] -rw-------. 1 boincer umatlas   2027520 Oct 13 09:07 result.tar.gz
[2025-10-13 09:07:42] -rw-r--r--. 1 boincer umatlas      8709 Oct 13 09:07 runtime_log.err
[2025-10-13 09:07:42] -rw-------. 1 boincer umatlas       656 Oct 13 09:07 IQ2NDmA6QS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmzhVMDm2iCaNn.diag
[2025-10-13 09:07:42] -rw-r--r--. 1 boincer umatlas     21044 Oct 13 09:07 stderr.txt
[2025-10-13 09:07:42] HITS file was successfully produced:
[2025-10-13 09:07:42] -rw-------. 1 boincer umatlas 189738466 Oct 13 09:05 shared/HITS.pool.root.1
[2025-10-13 09:07:42]  *** Contents of shared directory: ***
[2025-10-13 09:07:42] total 404616
[2025-10-13 09:07:42] -rw-r--r--. 2 boincer umatlas 221964470 Oct 13 05:46 ATLAS.root_0
[2025-10-13 09:07:42] -rw-r--r--. 2 boincer umatlas    569687 Oct 13 05:46 input.tar.gz
[2025-10-13 09:07:42] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 05:46 start_atlas.sh
[2025-10-13 09:07:42] -rw-------. 1 boincer umatlas 189738466 Oct 13 09:05 HITS.pool.root.1
[2025-10-13 09:07:42] -rw-------. 1 boincer umatlas   2027520 Oct 13 09:07 result.tar.gz
09:07:43 (3846970): run_atlas exited; CPU time 44011.389277
09:07:43 (3846970): called boinc_finish(0)

</stderr_txt>
]]>

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