Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
13:37:29 (27060): wrapper (7.7.26015): starting
13:37:29 (27060): wrapper: running run_atlas (--nthreads 1)
[2025-10-13 13:37:29] Arguments: --nthreads 1
[2025-10-13 13:37:29] Threads: 1
[2025-10-13 13:37:29] Checking for CVMFS
[2025-10-13 13:37:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 13:37:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 13:37:29] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 13:37:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 13:37:29] 2.11.0.0 3876 2741 64996 151660 2 1 2152281 4096001 0 130560 0 1608980 99.589 758310 1109 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2025-10-13 13:37:29] CVMFS is ok
[2025-10-13 13:37:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 13:37:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 13:37:29] Further information can be found at the LHC@home message board.
[2025-10-13 13:37:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 13:37:29] Checking for apptainer binary...
[2025-10-13 13:37:29] /usr/bin/which: no apptainer in (/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2025-10-13 13:37:29] apptainer is not installed, using version from CVMFS
[2025-10-13 13:37:29] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 13:37:29] WARNING: Environment variable TMPDIR already has value [/tmp/slurm_mf493845.10565794/lhc/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node056
[2025-10-13 13:37:29] apptainer works
[2025-10-13 13:37:29] Starting ATLAS job with PandaID=6842029276
[2025-10-13 13:37:29] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/slurm_mf493845.10565794/lhc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 19:08:15]  *** The last 200 lines of the pilot log: ***
[2025-10-13 19:08:15] 2025-10-13 17:07:11,373 | INFO     | maximum number of monitored processes: 6
[2025-10-13 19:08:15] 2025-10-13 17:07:11,459 | INFO     | time since job start (19776s) is within the limit (172800.0s)
[2025-10-13 19:08:15] 2025-10-13 17:07:12,364 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 19:08:15] 2025-10-13 17:07:12,368 | INFO     | found 64 cores (32 cores per socket, 2 sockets) , CPU MHz: 3175.42903125
[2025-10-13 19:08:15] 2025-10-13 17:07:12,373 | INFO     | using path: /tmp/slurm_mf493845.10565794/lhc/slots/0/PanDA_Pilot-6842029276/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 19:08:15] 2025-10-13 17:07:12,373 | INFO     | extracted standard info from prmon json
[2025-10-13 19:08:15] 2025-10-13 17:07:12,373 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 19:08:15] 2025-10-13 17:07:12,373 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 19:08:15] 2025-10-13 17:07:12,373 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 19:08:15] 2025-10-13 17:07:12,373 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 19:08:15] 2025-10-13 17:07:12,376 | INFO     | fitting pss+swap vs Time
[2025-10-13 19:08:15] 2025-10-13 17:07:12,376 | INFO     | sum of square deviations: 10546523325.0
[2025-10-13 19:08:15] 2025-10-13 17:07:12,378 | INFO     | sum of deviations: 11912366181.499998
[2025-10-13 19:08:15] 2025-10-13 17:07:12,378 | INFO     | mean x: 1760365327.5
[2025-10-13 19:08:15] 2025-10-13 17:07:12,378 | INFO     | mean y: 2245482.50308642
[2025-10-13 19:08:15] 2025-10-13 17:07:12,378 | INFO     | -- intersect: -1986098519.4190989
[2025-10-13 19:08:15] 2025-10-13 17:07:12,378 | INFO     | intersect: -1986098519.4190989
[2025-10-13 19:08:15] 2025-10-13 17:07:12,378 | INFO     | chi2: 1.051421056625586
[2025-10-13 19:08:15] 2025-10-13 17:07:12,378 | INFO     | sum of square deviations: 10065751520.0
[2025-10-13 19:08:15] 2025-10-13 17:07:12,380 | INFO     | sum of deviations: 11467215357.00001
[2025-10-13 19:08:15] 2025-10-13 17:07:12,380 | INFO     | mean x: 1760365175.0
[2025-10-13 19:08:15] 2025-10-13 17:07:12,380 | INFO     | mean y: 2245341.2915360504
[2025-10-13 19:08:15] 2025-10-13 17:07:12,380 | INFO     | -- intersect: -2003217095.226866
[2025-10-13 19:08:15] 2025-10-13 17:07:12,380 | INFO     | intersect: -2003217095.226866
[2025-10-13 19:08:15] 2025-10-13 17:07:12,380 | INFO     | chi2: 1.0514756666303098
[2025-10-13 19:08:15] 2025-10-13 17:07:12,380 | INFO     | current chi2=1.0514756666303098 (change=-0.0051939234410149065 %)
[2025-10-13 19:08:15] 2025-10-13 17:07:12,380 | INFO     | right removable region: 318
[2025-10-13 19:08:15] 2025-10-13 17:07:12,380 | INFO     | sum of square deviations: 10065751520.0
[2025-10-13 19:08:15] 2025-10-13 17:07:12,381 | INFO     | sum of deviations: -12116087545.999998
[2025-10-13 19:08:15] 2025-10-13 17:07:12,382 | INFO     | mean x: 1760365480.0
[2025-10-13 19:08:15] 2025-10-13 17:07:12,382 | INFO     | mean y: 2253010.5862068967
[2025-10-13 19:08:15] 2025-10-13 17:07:12,382 | INFO     | -- intersect: 2121194872.6277518
[2025-10-13 19:08:15] 2025-10-13 17:07:12,382 | INFO     | intersect: 2121194872.6277518
[2025-10-13 19:08:15] 2025-10-13 17:07:12,382 | INFO     | chi2: 0.03426498872247089
[2025-10-13 19:08:15] 2025-10-13 17:07:12,382 | INFO     | current chi2=0.03426498872247089 (change=96.74107832380298 %)
[2025-10-13 19:08:15] 2025-10-13 17:07:12,382 | INFO     | sum of square deviations: 9599817202.5
[2025-10-13 19:08:15] 2025-10-13 17:07:12,383 | INFO     | sum of deviations: -9785634121.500002
[2025-10-13 19:08:15] 2025-10-13 17:07:12,383 | INFO     | mean x: 1760365632.5
[2025-10-13 19:08:15] 2025-10-13 17:07:12,383 | INFO     | mean y: 2252247.194267516
[2025-10-13 19:08:15] 2025-10-13 17:07:12,383 | INFO     | -- intersect: 1796692040.8209455
[2025-10-13 19:08:15] 2025-10-13 17:07:12,384 | INFO     | intersect: 1796692040.8209455
[2025-10-13 19:08:15] 2025-10-13 17:07:12,384 | INFO     | chi2: 0.03291355266544771
[2025-10-13 19:08:15] 2025-10-13 17:07:12,384 | INFO     | current chi2=0.03291355266544771 (change=3.944072674207285 %)
[2025-10-13 19:08:15] 2025-10-13 17:07:12,384 | INFO     | left removable region: 20
[2025-10-13 19:08:15] 2025-10-13 17:07:12,384 | INFO     | sum of square deviations: 8205826414.5
[2025-10-13 19:08:15] 2025-10-13 17:07:12,385 | INFO     | sum of deviations: -3684029638.500001
[2025-10-13 19:08:15] 2025-10-13 17:07:12,385 | INFO     | mean x: 1760365754.5
[2025-10-13 19:08:15] 2025-10-13 17:07:12,385 | INFO     | mean y: 2249974.7617449663
[2025-10-13 19:08:15] 2025-10-13 17:07:12,385 | INFO     | -- intersect: 792571300.9256469
[2025-10-13 19:08:15] 2025-10-13 17:07:12,385 | INFO     | intersect: 792571300.9256469
[2025-10-13 19:08:15] 2025-10-13 17:07:12,386 | INFO     | chi2: 0.0256881606955518
[2025-10-13 19:08:15] 2025-10-13 17:07:12,386 | INFO     | -- intersect: 792571300.9256469
[2025-10-13 19:08:15] 2025-10-13 17:07:12,386 | INFO     | current memory leak: -0.45 B/s (using 298 data points, chi2=0.03)
[2025-10-13 19:08:15] 2025-10-13 17:07:12,386 | INFO     | could have reported an average CPU frequency of 3141 MHz (14 samples)
[2025-10-13 19:08:15] 2025-10-13 17:07:12,386 | INFO     | ..............................
[2025-10-13 19:08:15] 2025-10-13 17:07:12,386 | INFO     | . Timing measurements:
[2025-10-13 19:08:15] 2025-10-13 17:07:12,386 | INFO     | . get job = 0 s
[2025-10-13 19:08:15] 2025-10-13 17:07:12,386 | INFO     | . initial setup = 1 s
[2025-10-13 19:08:15] 2025-10-13 17:07:12,386 | INFO     | . payload setup = 2 s
[2025-10-13 19:08:15] 2025-10-13 17:07:12,386 | INFO     | . stage-in = 0 s
[2025-10-13 19:08:15] 2025-10-13 17:07:12,386 | INFO     | . payload execution = 19751 s
[2025-10-13 19:08:15] 2025-10-13 17:07:12,386 | INFO     | . stage-out = 0 s
[2025-10-13 19:08:15] 2025-10-13 17:07:12,386 | INFO     | . log creation = 0 s
[2025-10-13 19:08:15] 2025-10-13 17:07:12,386 | INFO     | ..............................
[2025-10-13 19:08:15] 2025-10-13 17:07:12,436 | INFO     | 
[2025-10-13 19:08:15] 2025-10-13 17:07:12,436 | INFO     | job summary report
[2025-10-13 19:08:15] 2025-10-13 17:07:12,436 | INFO     | --------------------------------------------------
[2025-10-13 19:08:15] 2025-10-13 17:07:12,436 | INFO     | PanDA job id: 6842029276
[2025-10-13 19:08:15] 2025-10-13 17:07:12,436 | INFO     | task id: 46676269
[2025-10-13 19:08:15] 2025-10-13 17:07:12,436 | INFO     | errors: (none)
[2025-10-13 19:08:15] 2025-10-13 17:07:12,436 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 19:08:15] 2025-10-13 17:07:12,436 | INFO     | pilot state: finished 
[2025-10-13 19:08:15] 2025-10-13 17:07:12,436 | INFO     | transexitcode: 0
[2025-10-13 19:08:15] 2025-10-13 17:07:12,436 | INFO     | exeerrorcode: 0
[2025-10-13 19:08:15] 2025-10-13 17:07:12,436 | INFO     | exeerrordiag: 
[2025-10-13 19:08:15] 2025-10-13 17:07:12,436 | INFO     | exitcode: 0
[2025-10-13 19:08:15] 2025-10-13 17:07:12,436 | INFO     | exitmsg: OK
[2025-10-13 19:08:15] 2025-10-13 17:07:12,436 | INFO     | cpuconsumptiontime: 19051 s
[2025-10-13 19:08:15] 2025-10-13 17:07:12,436 | INFO     | nevents: 400
[2025-10-13 19:08:15] 2025-10-13 17:07:12,436 | INFO     | neventsw: 0
[2025-10-13 19:08:15] 2025-10-13 17:07:12,436 | INFO     | pid: 13506
[2025-10-13 19:08:15] 2025-10-13 17:07:12,436 | INFO     | pgrp: 13506
[2025-10-13 19:08:15] 2025-10-13 17:07:12,436 | INFO     | corecount: 2
[2025-10-13 19:08:15] 2025-10-13 17:07:12,436 | INFO     | event service: False
[2025-10-13 19:08:15] 2025-10-13 17:07:12,436 | INFO     | sizes: {0: 2348654, 1: 2348964, 3: 2349226, 11: 2349254, 19757: 2382470, 19758: 2391504, 19761: 2391688, 19764: 2391882}
[2025-10-13 19:08:15] 2025-10-13 17:07:12,437 | INFO     | --------------------------------------------------
[2025-10-13 19:08:15] 2025-10-13 17:07:12,437 | INFO     | 
[2025-10-13 19:08:15] 2025-10-13 17:07:12,437 | INFO     | executing command: ls -lF /tmp/slurm_mf493845.10565794/lhc/slots/0
[2025-10-13 19:08:15] 2025-10-13 17:07:12,444 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 19:08:15] 2025-10-13 17:07:12,444 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 19:08:15] 2025-10-13 17:07:12,444 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 19:08:15] 2025-10-13 17:07:12,444 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 19:08:15] 2025-10-13 17:07:12,444 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 19:08:15] 2025-10-13 17:07:12,444 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 19:08:15] 2025-10-13 17:07:12,444 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 19:08:15] 2025-10-13 17:07:12,444 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 19:08:15] 2025-10-13 17:07:12,445 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 19:08:15] 2025-10-13 17:07:12,445 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 19:08:15] 2025-10-13 17:07:12,445 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 19:08:15] 2025-10-13 17:07:12,445 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 19:08:15] 2025-10-13 17:07:12,445 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 19:08:15] 2025-10-13 17:07:12,445 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 19:08:15] 2025-10-13 17:07:12,445 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 19:08:15] 2025-10-13 17:07:12,445 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 19:08:15] 2025-10-13 17:07:12,445 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 19:08:15] 2025-10-13 17:07:12,445 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 19:08:15] 2025-10-13 17:07:12,445 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 19:08:15] 2025-10-13 17:07:12,445 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 19:08:15] 2025-10-13 17:07:12,445 | INFO     | job 6842029276 has completed (purged errors)
[2025-10-13 19:08:15] 2025-10-13 17:07:12,445 | INFO     | overall cleanup function is called
[2025-10-13 19:08:15] 2025-10-13 17:07:13,451 | INFO     | --- collectZombieJob: --- 10, [13506]
[2025-10-13 19:08:15] 2025-10-13 17:07:13,451 | INFO     | zombie collector waiting for pid 13506
[2025-10-13 19:08:15] 2025-10-13 17:07:13,451 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 19:08:15] 2025-10-13 17:07:13,451 | INFO     | collected zombie processes
[2025-10-13 19:08:15] 2025-10-13 17:07:13,451 | INFO     | will attempt to kill all subprocesses of pid=13506
[2025-10-13 19:08:15] 2025-10-13 17:07:13,570 | INFO     | process IDs to be killed: [13506] (in reverse order)
[2025-10-13 19:08:15] 2025-10-13 17:07:13,613 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 19:08:15] 2025-10-13 17:07:13,613 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 19:08:15] 2025-10-13 17:07:13,618 | INFO     | did not find any defunct processes belonging to 13506
[2025-10-13 19:08:15] 2025-10-13 17:07:13,622 | INFO     | did not find any defunct processes belonging to 13506
[2025-10-13 19:08:15] 2025-10-13 17:07:13,622 | INFO     | ready for new job
[2025-10-13 19:08:15] 2025-10-13 17:07:13,622 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 19:08:15] 2025-10-13 17:07:13,623 | INFO     | ***************************************
[2025-10-13 19:08:15] 2025-10-13 17:07:13,623 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 19:08:15] 2025-10-13 17:07:13,623 | INFO     | ***************************************
[2025-10-13 19:08:15] 2025-10-13 17:07:13,623 | INFO     | 
[2025-10-13 19:08:15] 2025-10-13 17:07:13,638 | INFO     | architecture information:
[2025-10-13 19:08:15] 2025-10-13 17:07:13,638 | INFO     | executing command: cat /etc/os-release
[2025-10-13 19:08:15] 2025-10-13 17:07:13,643 | INFO     | cat /etc/os-release:
[2025-10-13 19:08:15] NAME="CentOS Linux"
[2025-10-13 19:08:15] VERSION="7 (Core)"
[2025-10-13 19:08:15] ID="centos"
[2025-10-13 19:08:15] ID_LIKE="rhel fedora"
[2025-10-13 19:08:15] VERSION_ID="7"
[2025-10-13 19:08:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 19:08:15] ANSI_COLOR="0;31"
[2025-10-13 19:08:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 19:08:15] HOME_URL="https://www.centos.org/"
[2025-10-13 19:08:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 19:08:15] 
[2025-10-13 19:08:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 19:08:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 19:08:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 19:08:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 19:08:15] 
[2025-10-13 19:08:15] 2025-10-13 17:07:13,643 | INFO     | ***************************************
[2025-10-13 19:08:15] 2025-10-13 17:07:14,146 | INFO     | executing command: df -mP /tmp/slurm_mf493845.10565794/lhc/slots/0
[2025-10-13 19:08:15] 2025-10-13 17:07:14,151 | INFO     | sufficient remaining disk space (225284456448 B)
[2025-10-13 19:08:15] 2025-10-13 17:07:14,151 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 19:08:15] 2025-10-13 17:07:14,151 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 19:08:15] 2025-10-13 17:07:14,151 | INFO     | update_server=False
[2025-10-13 19:08:15] 2025-10-13 17:07:14,151 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 19:08:15] 2025-10-13 17:07:14,151 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 19:08:15] 2025-10-13 17:07:14,203 | INFO     | all job control threads have been joined
[2025-10-13 19:08:15] 2025-10-13 17:07:14,526 | INFO     | all payload control threads have been joined
[2025-10-13 19:08:15] 2025-10-13 17:07:14,702 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 19:08:15] 2025-10-13 17:07:14,830 | INFO     | all data control threads have been joined
[2025-10-13 19:08:15] 2025-10-13 17:07:14,903 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 19:08:15] 2025-10-13 17:07:14,903 | INFO     | aborting loop
[2025-10-13 19:08:15] 2025-10-13 17:07:15,156 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 19:08:15] 2025-10-13 17:07:15,156 | INFO     | [job] queue monitor thread has finished
[2025-10-13 19:08:15] 2025-10-13 17:07:15,156 | INFO     | [job] retrieve thread has finished
[2025-10-13 19:08:15] 2025-10-13 17:07:15,208 | INFO     | [job] control thread has finished
[2025-10-13 19:08:15] 2025-10-13 17:07:15,531 | INFO     | [payload] control thread has finished
[2025-10-13 19:08:15] 2025-10-13 17:07:15,560 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 19:08:15] 2025-10-13 17:07:15,560 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 19:08:15] 2025-10-13 17:07:15,560 | INFO     | [data] copytool_in thread has finished
[2025-10-13 19:08:15] 2025-10-13 17:07:15,835 | INFO     | [data] control thread has finished
[2025-10-13 19:08:15] 2025-10-13 17:07:15,858 | INFO     | [job] validate thread has finished
[2025-10-13 19:08:15] 2025-10-13 17:07:15,908 | INFO     | [job] job monitor thread has finished
[2025-10-13 19:08:15] 2025-10-13 17:07:16,048 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 19:08:15] 2025-10-13 17:07:16,130 | INFO     | [payload] failed_post thread has finished
[2025-10-13 19:08:15] 2025-10-13 17:07:16,167 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 19:08:15] 2025-10-13 17:07:16,704 | INFO     | [payload] validate_post thread has finished
[2025-10-13 19:08:15] 2025-10-13 17:07:16,707 | INFO     | [data] copytool_out thread has finished
[2025-10-13 19:08:15] 2025-10-13 17:07:19,161 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 19:08:15] 2025-10-13 17:07:41,025 [wrapper] supervise_pilot (15 min periods counter: 23)
[2025-10-13 19:08:15] 2025-10-13 17:07:44,665 | INFO     | PID=445 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2025-10-13 19:08:15] 2025-10-13 17:07:44,665 | INFO     | .. there are 4 such processes running
[2025-10-13 19:08:15] 2025-10-13 17:07:44,665 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 19:08:15] 2025-10-13 17:07:44,665 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 19:08:15] 2025-10-13 17:07:44,665 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 19:08:15] 2025-10-13 17:08:08,771 | INFO     | [monitor] cgroup control has ended
[2025-10-13 19:08:15] 2025-10-13 17:08:10,680 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456062637824)>']
[2025-10-13 19:08:15] 2025-10-13 17:08:10,781 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 19:08:15] 2025-10-13 17:08:10,781 | INFO     | [monitor] control thread has ended
[2025-10-13 19:08:15] 2025-10-13 17:08:15,705 | INFO     | all workflow threads have been joined
[2025-10-13 19:08:15] 2025-10-13 17:08:15,705 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 19:08:15] 2025-10-13 17:08:15,705 | INFO     | traces error code: 0
[2025-10-13 19:08:15] 2025-10-13 17:08:15,705 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 19:08:15] 2025-10-13 17:08:15,759 [wrapper] ==== pilot stdout END ====
[2025-10-13 19:08:15] 2025-10-13 17:08:15,760 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 19:08:15] 2025-10-13 17:08:15,761 [wrapper] pilotpid: 445
[2025-10-13 19:08:15] 2025-10-13 17:08:15,762 [wrapper] Pilot exit status: 0
[2025-10-13 19:08:15] 2025-10-13 17:08:15,767 [wrapper] pandaids: 6842029276
[2025-10-13 19:08:15] 2025-10-13 17:08:15,797 [wrapper] cleanup supervisor_pilot 21825 446
[2025-10-13 19:08:15] 2025-10-13 17:08:15,798 [wrapper] Test setup, not cleaning
[2025-10-13 19:08:15] 2025-10-13 17:08:15,799 [wrapper] apfmon messages muted
[2025-10-13 19:08:15] 2025-10-13 17:08:15,800 [wrapper] ==== wrapper stdout END ====
[2025-10-13 19:08:15] 2025-10-13 17:08:15,801 [wrapper] ==== wrapper stderr END ====
[2025-10-13 19:08:15]  *** Error codes and diagnostics ***
[2025-10-13 19:08:15]     "exeErrorCode": 0,
[2025-10-13 19:08:15]     "exeErrorDiag": "",
[2025-10-13 19:08:15]     "pilotErrorCode": 0,
[2025-10-13 19:08:15]     "pilotErrorDiag": "",
[2025-10-13 19:08:15]  *** Listing of results directory ***
[2025-10-13 19:08:15] total 410492
[2025-10-13 19:08:15] -rw------- 1 mf493845 unix-user    557409 Oct 13 05:15 pilot3.tar.gz
[2025-10-13 19:08:15] -rwx------ 1 mf493845 unix-user     36292 Oct 13 05:20 runpilot2-wrapper.sh
[2025-10-13 19:08:15] -rw------- 1 mf493845 unix-user      5112 Oct 13 05:20 queuedata.json
[2025-10-13 19:08:15] -rw------- 1 mf493845 unix-user       100 Oct 13 12:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 19:08:15] -rwxr-xr-x 1 mf493845 unix-user      7986 Oct 13 12:41 run_atlas
[2025-10-13 19:08:15] -rw------- 1 mf493845 unix-user       105 Oct 13 12:41 job.xml
[2025-10-13 19:08:15] -rw-r--r-- 2 mf493845 unix-user 220345119 Oct 13 13:37 EVNT.46676267._002134.pool.root.1
[2025-10-13 19:08:15] -rw-r--r-- 2 mf493845 unix-user     15120 Oct 13 13:37 start_atlas.sh
[2025-10-13 19:08:15] drwxrwx--x 2 mf493845 unix-user       100 Oct 13 13:37 shared
[2025-10-13 19:08:15] -rw-r--r-- 2 mf493845 unix-user    569680 Oct 13 13:37 input.tar.gz
[2025-10-13 19:08:15] -rw------- 1 mf493845 unix-user         0 Oct 13 13:37 boinc_setup_complete
[2025-10-13 19:08:15] -rw------- 1 mf493845 unix-user      8192 Oct 13 13:37 boinc_mmap_file
[2025-10-13 19:08:15] -rw------- 1 mf493845 unix-user         0 Oct 13 13:37 boinc_lockfile
[2025-10-13 19:08:15] -rw------- 1 mf493845 unix-user      2550 Oct 13 13:37 pandaJob.out
[2025-10-13 19:08:15] -rw------- 1 mf493845 unix-user    972497 Oct 13 13:37 agis_schedconf.cvmfs.json
[2025-10-13 19:08:15] drwx------ 5 mf493845 unix-user       440 Oct 13 13:37 pilot3
[2025-10-13 19:08:15] -rw------- 1 mf493845 unix-user      6399 Oct 13 16:44 init_data.xml
[2025-10-13 19:08:15] -rw------- 1 mf493845 unix-user 189743847 Oct 13 19:06 HITS.46676269._095710.pool.root.1
[2025-10-13 19:08:15] -rw------- 1 mf493845 unix-user      1022 Oct 13 19:07 memory_monitor_summary.json
[2025-10-13 19:08:15] -rw------- 1 mf493845 unix-user        95 Oct 13 19:07 pilot_heartbeat.json
[2025-10-13 19:08:15] -rw------- 1 mf493845 unix-user   1560580 Oct 13 19:07 agis_ddmendpoints.agis.ALL.json
[2025-10-13 19:08:15] -rw------- 1 mf493845 unix-user    435972 Oct 13 19:07 log.46676269._095710.job.log.tgz.1
[2025-10-13 19:08:15] -rw------- 1 mf493845 unix-user      7778 Oct 13 19:07 heartbeat.json
[2025-10-13 19:08:15] -rw------- 1 mf493845 unix-user      4836 Oct 13 19:08 pilotlog.txt
[2025-10-13 19:08:15] -rw------- 1 mf493845 unix-user   2754336 Oct 13 19:08 log.46676269._095710.job.log.1
[2025-10-13 19:08:15] -rw------- 1 mf493845 unix-user       357 Oct 13 19:08 output.list
[2025-10-13 19:08:15] -rw------- 1 mf493845 unix-user       620 Oct 13 19:08 runtime_log
[2025-10-13 19:08:15] -rw------- 1 mf493845 unix-user   3205120 Oct 13 19:08 result.tar.gz
[2025-10-13 19:08:15] -rw------- 1 mf493845 unix-user       649 Oct 13 19:08 Ub4KDmfHOS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmdcmNDmengKQo.diag
[2025-10-13 19:08:15] -rw------- 1 mf493845 unix-user      8981 Oct 13 19:08 runtime_log.err
[2025-10-13 19:08:15] -rw------- 1 mf493845 unix-user     21427 Oct 13 19:08 stderr.txt
[2025-10-13 19:08:15] HITS file was successfully produced:
[2025-10-13 19:08:15] -rw------- 1 mf493845 unix-user 189743847 Oct 13 19:06 shared/HITS.pool.root.1
[2025-10-13 19:08:15]  *** Contents of shared directory: ***
[2025-10-13 19:08:15] total 404192
[2025-10-13 19:08:15] -rw-r--r-- 2 mf493845 unix-user 220345119 Oct 13 13:37 ATLAS.root_0
[2025-10-13 19:08:15] -rw-r--r-- 2 mf493845 unix-user     15120 Oct 13 13:37 start_atlas.sh
[2025-10-13 19:08:15] -rw-r--r-- 2 mf493845 unix-user    569680 Oct 13 13:37 input.tar.gz
[2025-10-13 19:08:15] -rw------- 1 mf493845 unix-user 189743847 Oct 13 19:06 HITS.pool.root.1
[2025-10-13 19:08:15] -rw------- 1 mf493845 unix-user   3205120 Oct 13 19:08 result.tar.gz
19:08:17 (27060): run_atlas exited; CPU time 19372.304902
19:08:17 (27060): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN