Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:57:54 (13954): wrapper (7.7.26015): starting
19:57:54 (13954): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 19:57:54] Arguments: --nthreads 8
[2025-10-13 19:57:54] Threads: 8
[2025-10-13 19:57:54] Checking for CVMFS
[2025-10-13 19:57:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 19:57:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 19:57:56] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 19:57:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 19:57:57] 2.11.2.0 11804 22037 79824 151668 0 61 16212267 25165825 4632 130560 0 5547997 99.961 2025690 1398 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-13 19:57:57] CVMFS is ok
[2025-10-13 19:57:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 19:57:57] Checking for apptainer binary...
[2025-10-13 19:57:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 19:57:57] Running /usr/bin/apptainer --version
[2025-10-13 19:57:57] apptainer version 1.3.2-1.el7
[2025-10-13 19:57:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 19:58:25] cg-vwn390.simple-grid.lan
[2025-10-13 19:58:25] apptainer works
[2025-10-13 19:58:25] Set ATHENA_PROC_NUMBER=8
[2025-10-13 19:58:25] Set ATHENA_CORE_NUMBER=8
[2025-10-13 19:58:25] Starting ATLAS job with PandaID=6841882698
[2025-10-13 19:58:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 23:52:44]  *** The last 200 lines of the pilot log: ***
[2025-10-13 23:52:44] 2025-10-13 21:51:48,160 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 23:52:44] 2025-10-13 21:51:48,160 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 23:52:44] 2025-10-13 21:51:48,164 | INFO     | fitting pss+swap vs Time
[2025-10-13 23:52:44] 2025-10-13 21:51:48,165 | INFO     | sum of square deviations: 3168461268.0
[2025-10-13 23:52:44] 2025-10-13 21:51:48,167 | INFO     | sum of deviations: 52619280699.000015
[2025-10-13 23:52:44] 2025-10-13 21:51:48,167 | INFO     | mean x: 1760385590.0
[2025-10-13 23:52:44] 2025-10-13 21:51:48,167 | INFO     | mean y: 2448001.935483871
[2025-10-13 23:52:44] 2025-10-13 21:51:48,167 | INFO     | -- intersect: -29232633529.345127
[2025-10-13 23:52:44] 2025-10-13 21:51:48,167 | INFO     | intersect: -29232633529.345127
[2025-10-13 23:52:44] 2025-10-13 21:51:48,168 | INFO     | chi2: 5.2818170393779775
[2025-10-13 23:52:44] 2025-10-13 21:51:48,168 | INFO     | sum of square deviations: 2954447953.0
[2025-10-13 23:52:44] 2025-10-13 21:51:48,170 | INFO     | sum of deviations: 65801419952.500015
[2025-10-13 23:52:44] 2025-10-13 21:51:48,170 | INFO     | mean x: 1760385437.5
[2025-10-13 23:52:44] 2025-10-13 21:51:48,170 | INFO     | mean y: 2457204.882075472
[2025-10-13 23:52:44] 2025-10-13 21:51:48,170 | INFO     | -- intersect: -39204820531.58343
[2025-10-13 23:52:44] 2025-10-13 21:51:48,170 | INFO     | intersect: -39204820531.58343
[2025-10-13 23:52:44] 2025-10-13 21:51:48,170 | INFO     | chi2: 4.550310906882068
[2025-10-13 23:52:44] 2025-10-13 21:51:48,171 | INFO     | current chi2=4.550310906882068 (change=13.84951669174169 %)
[2025-10-13 23:52:44] 2025-10-13 21:51:48,171 | INFO     | right removable region: 211
[2025-10-13 23:52:44] 2025-10-13 21:51:48,171 | INFO     | sum of square deviations: 2954447953.0
[2025-10-13 23:52:44] 2025-10-13 21:51:48,173 | INFO     | sum of deviations: -15591613999.5
[2025-10-13 23:52:44] 2025-10-13 21:51:48,173 | INFO     | mean x: 1760385742.5
[2025-10-13 23:52:44] 2025-10-13 21:51:48,173 | INFO     | mean y: 2496516.702830189
[2025-10-13 23:52:44] 2025-10-13 21:51:48,173 | INFO     | -- intersect: 9292643245.946362
[2025-10-13 23:52:44] 2025-10-13 21:51:48,173 | INFO     | intersect: 9292643245.946362
[2025-10-13 23:52:44] 2025-10-13 21:51:48,173 | INFO     | chi2: 1.3629390117251752
[2025-10-13 23:52:44] 2025-10-13 21:51:48,173 | INFO     | current chi2=1.3629390117251752 (change=74.1956413566782 %)
[2025-10-13 23:52:44] 2025-10-13 21:51:48,174 | INFO     | sum of square deviations: 2750295288.0
[2025-10-13 23:52:44] 2025-10-13 21:51:48,175 | INFO     | sum of deviations: -36726327828.0
[2025-10-13 23:52:44] 2025-10-13 21:51:48,175 | INFO     | mean x: 1760385895.0
[2025-10-13 23:52:44] 2025-10-13 21:51:48,176 | INFO     | mean y: 2512174.884057971
[2025-10-13 23:52:44] 2025-10-13 21:51:48,176 | INFO     | -- intersect: 23509991450.16295
[2025-10-13 23:52:44] 2025-10-13 21:51:48,176 | INFO     | intersect: 23509991450.16295
[2025-10-13 23:52:44] 2025-10-13 21:51:48,176 | INFO     | chi2: 0.8253532787092047
[2025-10-13 23:52:44] 2025-10-13 21:51:48,176 | INFO     | current chi2=0.8253532787092047 (change=39.44312462928971 %)
[2025-10-13 23:52:44] 2025-10-13 21:51:48,177 | INFO     | sum of square deviations: 2555770710.5
[2025-10-13 23:52:44] 2025-10-13 21:51:48,178 | INFO     | sum of deviations: -35916966560.500015
[2025-10-13 23:52:44] 2025-10-13 21:51:48,178 | INFO     | mean x: 1760386047.5
[2025-10-13 23:52:44] 2025-10-13 21:51:48,178 | INFO     | mean y: 2511534.1831683167
[2025-10-13 23:52:44] 2025-10-13 21:51:48,178 | INFO     | -- intersect: 24741713115.0866
[2025-10-13 23:52:44] 2025-10-13 21:51:48,179 | INFO     | intersect: 24741713115.0866
[2025-10-13 23:52:44] 2025-10-13 21:51:48,179 | INFO     | chi2: 0.8242690216832409
[2025-10-13 23:52:44] 2025-10-13 21:51:48,179 | INFO     | current chi2=0.8242690216832409 (change=0.13136883973606095 %)
[2025-10-13 23:52:44] 2025-10-13 21:51:48,179 | INFO     | left removable region: 30
[2025-10-13 23:52:44] 2025-10-13 21:51:48,179 | INFO     | sum of square deviations: 1838657730.0
[2025-10-13 23:52:44] 2025-10-13 21:51:48,181 | INFO     | sum of deviations: -15766508960.0
[2025-10-13 23:52:44] 2025-10-13 21:51:48,181 | INFO     | mean x: 1760386322.0
[2025-10-13 23:52:44] 2025-10-13 21:51:48,181 | INFO     | mean y: 2517826.226519337
[2025-10-13 23:52:44] 2025-10-13 21:51:48,181 | INFO     | -- intersect: 15097848656.981216
[2025-10-13 23:52:44] 2025-10-13 21:51:48,181 | INFO     | intersect: 15097848656.981216
[2025-10-13 23:52:44] 2025-10-13 21:51:48,188 | INFO     | chi2: 0.03181690994557972
[2025-10-13 23:52:44] 2025-10-13 21:51:48,188 | INFO     | -- intersect: 15097848656.981216
[2025-10-13 23:52:44] 2025-10-13 21:51:48,188 | INFO     | current memory leak: -8.58 B/s (using 181 data points, chi2=0.03)
[2025-10-13 23:52:44] 2025-10-13 21:51:48,189 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-13 23:52:44] 2025-10-13 21:51:48,189 | INFO     | ..............................
[2025-10-13 23:52:44] 2025-10-13 21:51:48,189 | INFO     | . Timing measurements:
[2025-10-13 23:52:44] 2025-10-13 21:51:48,189 | INFO     | . get job = 0 s
[2025-10-13 23:52:44] 2025-10-13 21:51:48,189 | INFO     | . initial setup = 6 s
[2025-10-13 23:52:44] 2025-10-13 21:51:48,189 | INFO     | . payload setup = 135 s
[2025-10-13 23:52:44] 2025-10-13 21:51:48,189 | INFO     | . stage-in = 0 s
[2025-10-13 23:52:44] 2025-10-13 21:51:48,190 | INFO     | . payload execution = 13356 s
[2025-10-13 23:52:44] 2025-10-13 21:51:48,190 | INFO     | . stage-out = 3 s
[2025-10-13 23:52:44] 2025-10-13 21:51:48,190 | INFO     | . log creation = 1 s
[2025-10-13 23:52:44] 2025-10-13 21:51:48,190 | INFO     | ..............................
[2025-10-13 23:52:44] 2025-10-13 21:51:48,327 | INFO     | 
[2025-10-13 23:52:44] 2025-10-13 21:51:48,327 | INFO     | job summary report
[2025-10-13 23:52:44] 2025-10-13 21:51:48,327 | INFO     | --------------------------------------------------
[2025-10-13 23:52:44] 2025-10-13 21:51:48,327 | INFO     | PanDA job id: 6841882698
[2025-10-13 23:52:44] 2025-10-13 21:51:48,327 | INFO     | task id: 46676269
[2025-10-13 23:52:44] 2025-10-13 21:51:48,327 | INFO     | errors: (none)
[2025-10-13 23:52:44] 2025-10-13 21:51:48,327 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 23:52:44] 2025-10-13 21:51:48,327 | INFO     | pilot state: finished 
[2025-10-13 23:52:44] 2025-10-13 21:51:48,327 | INFO     | transexitcode: 0
[2025-10-13 23:52:44] 2025-10-13 21:51:48,327 | INFO     | exeerrorcode: 0
[2025-10-13 23:52:44] 2025-10-13 21:51:48,328 | INFO     | exeerrordiag: 
[2025-10-13 23:52:44] 2025-10-13 21:51:48,328 | INFO     | exitcode: 0
[2025-10-13 23:52:44] 2025-10-13 21:51:48,328 | INFO     | exitmsg: OK
[2025-10-13 23:52:44] 2025-10-13 21:51:48,328 | INFO     | cpuconsumptiontime: 50426 s
[2025-10-13 23:52:44] 2025-10-13 21:51:48,328 | INFO     | nevents: 400
[2025-10-13 23:52:44] 2025-10-13 21:51:48,328 | INFO     | neventsw: 0
[2025-10-13 23:52:44] 2025-10-13 21:51:48,328 | INFO     | pid: 24294
[2025-10-13 23:52:44] 2025-10-13 21:51:48,328 | INFO     | pgrp: 24294
[2025-10-13 23:52:44] 2025-10-13 21:51:48,328 | INFO     | corecount: 8
[2025-10-13 23:52:44] 2025-10-13 21:51:48,328 | INFO     | event service: False
[2025-10-13 23:52:44] 2025-10-13 21:51:48,328 | INFO     | sizes: {0: 2347979, 1: 2348835, 2: 2348863, 12: 2348863, 23: 2348891, 34: 2348919, 45: 2349075, 55: 2349103, 66: 2349131, 77: 2349159, 78: 2349477, 88: 2349813, 13
[2025-10-13 23:52:44] 2025-10-13 21:51:48,328 | INFO     | --------------------------------------------------
[2025-10-13 23:52:44] 2025-10-13 21:51:48,328 | INFO     | 
[2025-10-13 23:52:44] 2025-10-13 21:51:48,329 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-10-13 23:52:44] 2025-10-13 21:51:48,751 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 23:52:44] 2025-10-13 21:51:48,751 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 23:52:44] 2025-10-13 21:51:48,751 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 23:52:44] 2025-10-13 21:51:48,751 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 23:52:44] 2025-10-13 21:51:48,752 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 23:52:44] 2025-10-13 21:51:48,752 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 23:52:44] 2025-10-13 21:51:48,752 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 23:52:44] 2025-10-13 21:51:48,752 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 23:52:44] 2025-10-13 21:51:48,752 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 23:52:44] 2025-10-13 21:51:48,752 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 23:52:44] 2025-10-13 21:51:48,752 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 23:52:44] 2025-10-13 21:51:48,752 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 23:52:44] 2025-10-13 21:51:48,752 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 23:52:44] 2025-10-13 21:51:48,752 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 23:52:44] 2025-10-13 21:51:48,752 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 23:52:44] 2025-10-13 21:51:48,752 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 23:52:44] 2025-10-13 21:51:48,753 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 23:52:44] 2025-10-13 21:51:48,753 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 23:52:44] 2025-10-13 21:51:48,753 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 23:52:44] 2025-10-13 21:51:48,753 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 23:52:44] 2025-10-13 21:51:48,753 | INFO     | job 6841882698 has completed (purged errors)
[2025-10-13 23:52:44] 2025-10-13 21:51:48,753 | INFO     | overall cleanup function is called
[2025-10-13 23:52:44] 2025-10-13 21:51:49,761 | INFO     | --- collectZombieJob: --- 10, [24294]
[2025-10-13 23:52:44] 2025-10-13 21:51:49,762 | INFO     | zombie collector waiting for pid 24294
[2025-10-13 23:52:44] 2025-10-13 21:51:49,762 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 23:52:44] 2025-10-13 21:51:49,762 | INFO     | collected zombie processes
[2025-10-13 23:52:44] 2025-10-13 21:51:49,762 | INFO     | will attempt to kill all subprocesses of pid=24294
[2025-10-13 23:52:44] 2025-10-13 21:51:49,885 | INFO     | process IDs to be killed: [24294] (in reverse order)
[2025-10-13 23:52:44] 2025-10-13 21:51:50,742 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 23:52:44] 2025-10-13 21:51:50,742 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 23:52:44] 2025-10-13 21:51:50,745 | INFO     | did not find any defunct processes belonging to 24294
[2025-10-13 23:52:44] 2025-10-13 21:51:50,748 | INFO     | did not find any defunct processes belonging to 24294
[2025-10-13 23:52:44] 2025-10-13 21:51:50,748 | INFO     | ready for new job
[2025-10-13 23:52:44] 2025-10-13 21:51:50,748 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 23:52:44] 2025-10-13 21:51:50,750 | INFO     | ***************************************
[2025-10-13 23:52:44] 2025-10-13 21:51:50,750 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 23:52:44] 2025-10-13 21:51:50,750 | INFO     | ***************************************
[2025-10-13 23:52:44] 2025-10-13 21:51:50,750 | INFO     | 
[2025-10-13 23:52:44] 2025-10-13 21:51:50,751 | INFO     | pilot is running in a VM
[2025-10-13 23:52:44] 2025-10-13 21:51:50,751 | INFO     | architecture information:
[2025-10-13 23:52:44] 2025-10-13 21:51:50,766 | INFO     | executing command: cat /etc/os-release
[2025-10-13 23:52:44] 2025-10-13 21:51:51,138 | INFO     | cat /etc/os-release:
[2025-10-13 23:52:44] NAME="CentOS Linux"
[2025-10-13 23:52:44] VERSION="7 (Core)"
[2025-10-13 23:52:44] ID="centos"
[2025-10-13 23:52:44] ID_LIKE="rhel fedora"
[2025-10-13 23:52:44] VERSION_ID="7"
[2025-10-13 23:52:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 23:52:44] ANSI_COLOR="0;31"
[2025-10-13 23:52:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 23:52:44] HOME_URL="https://www.centos.org/"
[2025-10-13 23:52:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 23:52:44] 
[2025-10-13 23:52:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 23:52:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 23:52:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 23:52:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 23:52:44] 
[2025-10-13 23:52:44] 2025-10-13 21:51:51,138 | INFO     | ***************************************
[2025-10-13 23:52:44] 2025-10-13 21:51:51,642 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-10-13 23:52:44] 2025-10-13 21:51:51,928 | INFO     | sufficient remaining disk space (496243834880 B)
[2025-10-13 23:52:44] 2025-10-13 21:51:51,928 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 23:52:44] 2025-10-13 21:51:51,928 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 23:52:44] 2025-10-13 21:51:51,929 | INFO     | update_server=False
[2025-10-13 23:52:44] 2025-10-13 21:51:51,929 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 23:52:44] 2025-10-13 21:51:51,931 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 23:52:44] 2025-10-13 21:51:52,265 | INFO     | all data control threads have been joined
[2025-10-13 23:52:44] 2025-10-13 21:51:52,293 | INFO     | all payload control threads have been joined
[2025-10-13 23:52:44] 2025-10-13 21:51:52,701 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 23:52:44] 2025-10-13 21:51:52,702 | INFO     | aborting loop
[2025-10-13 23:52:44] 2025-10-13 21:51:52,935 | INFO     | [job] retrieve thread has finished
[2025-10-13 23:52:44] 2025-10-13 21:51:53,104 | INFO     | all job control threads have been joined
[2025-10-13 23:52:44] 2025-10-13 21:51:53,267 | INFO     | [payload] validate_post thread has finished
[2025-10-13 23:52:44] 2025-10-13 21:51:53,271 | INFO     | [data] control thread has finished
[2025-10-13 23:52:44] 2025-10-13 21:51:53,299 | INFO     | [payload] control thread has finished
[2025-10-13 23:52:44] 2025-10-13 21:51:53,346 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 23:52:44] 2025-10-13 21:51:53,533 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 23:52:44] 2025-10-13 21:51:53,708 | INFO     | [job] job monitor thread has finished
[2025-10-13 23:52:44] 2025-10-13 21:51:53,857 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 23:52:44] 2025-10-13 21:51:53,864 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 23:52:44] 2025-10-13 21:51:53,938 | INFO     | [data] copytool_out thread has finished
[2025-10-13 23:52:44] 2025-10-13 21:51:53,952 | INFO     | [job] validate thread has finished
[2025-10-13 23:52:44] 2025-10-13 21:51:54,024 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 23:52:44] 2025-10-13 21:51:54,035 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 23:52:44] 2025-10-13 21:51:54,045 | INFO     | [data] copytool_in thread has finished
[2025-10-13 23:52:44] 2025-10-13 21:51:54,110 | INFO     | [job] control thread has finished
[2025-10-13 23:52:44] 2025-10-13 21:51:54,183 | INFO     | [payload] failed_post thread has finished
[2025-10-13 23:52:44] 2025-10-13 21:51:54,352 | INFO     | [job] queue monitor thread has finished
[2025-10-13 23:52:44] 2025-10-13 21:51:57,542 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 23:52:44] 2025-10-13 21:52:20,940 | INFO     | PID=17768 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 23:52:44] 2025-10-13 21:52:20,940 | INFO     | .. there are 9 such processes running
[2025-10-13 23:52:44] 2025-10-13 21:52:20,940 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 23:52:44] 2025-10-13 21:52:20,940 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 23:52:44] 2025-10-13 21:52:20,941 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 23:52:44] 2025-10-13 21:52:33,877 | INFO     | [monitor] cgroup control has ended
[2025-10-13 23:52:44] 2025-10-13 21:52:34,005 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140160686036800)>', '<ExcThread(monitor, started 140160243050240)>']
[2025-10-13 23:52:44] 2025-10-13 21:52:34,017 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 23:52:44] 2025-10-13 21:52:34,018 | INFO     | [monitor] control thread has ended
[2025-10-13 23:52:44] 2025-10-13 21:52:39,031 | INFO     | all workflow threads have been joined
[2025-10-13 23:52:44] 2025-10-13 21:52:39,032 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 23:52:44] 2025-10-13 21:52:39,032 | INFO     | traces error code: 0
[2025-10-13 23:52:44] 2025-10-13 21:52:39,032 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 23:52:44] 2025-10-13 21:52:39,369 [wrapper] ==== pilot stdout END ====
[2025-10-13 23:52:44] 2025-10-13 21:52:39,446 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 23:52:44] 2025-10-13 21:52:39,524 [wrapper] pilotpid: 17768
[2025-10-13 23:52:44] 2025-10-13 21:52:39,645 [wrapper] Pilot exit status: 0
[2025-10-13 23:52:44] 2025-10-13 21:52:40,192 [wrapper] pandaids: 6841882698
[2025-10-13 23:52:44] 2025-10-13 21:52:41,257 [wrapper] cleanup supervisor_pilot 15715 17769
[2025-10-13 23:52:44] 2025-10-13 21:52:41,308 [wrapper] Test setup, not cleaning
[2025-10-13 23:52:44] 2025-10-13 21:52:41,397 [wrapper] apfmon messages muted
[2025-10-13 23:52:44] 2025-10-13 21:52:41,463 [wrapper] ==== wrapper stdout END ====
[2025-10-13 23:52:44] 2025-10-13 21:52:41,577 [wrapper] ==== wrapper stderr END ====
[2025-10-13 23:52:44]  *** Error codes and diagnostics ***
[2025-10-13 23:52:44]     "exeErrorCode": 0,
[2025-10-13 23:52:44]     "exeErrorDiag": "",
[2025-10-13 23:52:44]     "pilotErrorCode": 0,
[2025-10-13 23:52:44]     "pilotErrorDiag": "",
[2025-10-13 23:52:44]  *** Listing of results directory ***
[2025-10-13 23:52:44] total 408928
[2025-10-13 23:52:44] -rw-r--r--. 1 boinc boinc    557409 Oct 13 05:02 pilot3.tar.gz
[2025-10-13 23:52:44] -rw-r--r--. 1 boinc boinc      5112 Oct 13 05:14 queuedata.json
[2025-10-13 23:52:44] -rwx------. 1 boinc boinc     36292 Oct 13 05:14 runpilot2-wrapper.sh
[2025-10-13 23:52:44] -rw-r--r--. 1 boinc boinc       100 Oct 13 19:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 23:52:44] -rwxr-xr-x. 1 boinc boinc      7986 Oct 13 19:57 run_atlas
[2025-10-13 23:52:44] -rw-r--r--. 1 boinc boinc       105 Oct 13 19:57 job.xml
[2025-10-13 23:52:44] -rw-r--r--. 1 boinc boinc      6390 Oct 13 19:57 init_data.xml
[2025-10-13 23:52:44] -rw-r--r--. 2 boinc boinc 222672776 Oct 13 19:57 EVNT.46676267._002418.pool.root.1
[2025-10-13 23:52:44] -rw-r--r--. 2 boinc boinc     15120 Oct 13 19:57 start_atlas.sh
[2025-10-13 23:52:44] drwxrwx--x. 2 boinc boinc        68 Oct 13 19:57 shared
[2025-10-13 23:52:44] -rw-r--r--. 2 boinc boinc    569688 Oct 13 19:57 input.tar.gz
[2025-10-13 23:52:44] -rw-r--r--. 1 boinc boinc         0 Oct 13 19:57 boinc_lockfile
[2025-10-13 23:52:44] -rw-r--r--. 1 boinc boinc      2550 Oct 13 19:58 pandaJob.out
[2025-10-13 23:52:44] -rw-------. 1 boinc boinc    972791 Oct 13 20:02 agis_schedconf.cvmfs.json
[2025-10-13 23:52:44] drwx------. 5 boinc boinc      4096 Oct 13 20:02 pilot3
[2025-10-13 23:52:44] -rw-------. 1 boinc boinc 187610847 Oct 13 23:48 HITS.46676269._095594.pool.root.1
[2025-10-13 23:52:44] -rw-r--r--. 1 boinc boinc       531 Oct 13 23:49 boinc_task_state.xml
[2025-10-13 23:52:44] -rw-------. 1 boinc boinc      1028 Oct 13 23:50 memory_monitor_summary.json
[2025-10-13 23:52:44] -rw-------. 1 boinc boinc   1560580 Oct 13 23:50 agis_ddmendpoints.agis.ALL.json
[2025-10-13 23:52:44] -rw-------. 1 boinc boinc    437542 Oct 13 23:50 log.46676269._095594.job.log.tgz.1
[2025-10-13 23:52:44] -rw-------. 1 boinc boinc        95 Oct 13 23:51 pilot_heartbeat.json
[2025-10-13 23:52:44] -rw-------. 1 boinc boinc      7783 Oct 13 23:51 heartbeat.json
[2025-10-13 23:52:44] -rw-------. 1 boinc boinc      4884 Oct 13 23:52 pilotlog.txt
[2025-10-13 23:52:44] -rw-r--r--. 1 boinc boinc      8192 Oct 13 23:52 boinc_mmap_file
[2025-10-13 23:52:44] -rw-r--r--. 1 boinc boinc        28 Oct 13 23:52 wrapper_checkpoint.txt
[2025-10-13 23:52:44] -rw-------. 1 boinc boinc   1849054 Oct 13 23:52 log.46676269._095594.job.log.1
[2025-10-13 23:52:44] -rw-------. 1 boinc boinc       357 Oct 13 23:52 output.list
[2025-10-13 23:52:44] -rw-r--r--. 1 boinc boinc       620 Oct 13 23:52 runtime_log
[2025-10-13 23:52:44] -rw-------. 1 boinc boinc   2304000 Oct 13 23:52 result.tar.gz
[2025-10-13 23:52:44] -rw-r--r--. 1 boinc boinc      8703 Oct 13 23:52 runtime_log.err
[2025-10-13 23:52:44] -rw-------. 1 boinc boinc       657 Oct 13 23:52 BseMDmcCOS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmubmNDmXALT0m.diag
[2025-10-13 23:52:44] -rw-r--r--. 1 boinc boinc     20600 Oct 13 23:52 stderr.txt
[2025-10-13 23:52:44] HITS file was successfully produced:
[2025-10-13 23:52:44] -rw-------. 1 boinc boinc 187610847 Oct 13 23:48 shared/HITS.pool.root.1
[2025-10-13 23:52:44]  *** Contents of shared directory: ***
[2025-10-13 23:52:44] total 403500
[2025-10-13 23:52:44] -rw-r--r--. 2 boinc boinc 222672776 Oct 13 19:57 ATLAS.root_0
[2025-10-13 23:52:44] -rw-r--r--. 2 boinc boinc     15120 Oct 13 19:57 start_atlas.sh
[2025-10-13 23:52:44] -rw-r--r--. 2 boinc boinc    569688 Oct 13 19:57 input.tar.gz
[2025-10-13 23:52:44] -rw-------. 1 boinc boinc 187610847 Oct 13 23:48 HITS.pool.root.1
[2025-10-13 23:52:44] -rw-------. 1 boinc boinc   2304000 Oct 13 23:52 result.tar.gz
23:52:46 (13954): run_atlas exited; CPU time 50606.583322
23:52:46 (13954): called boinc_finish(0)

</stderr_txt>
]]>

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