Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:00:13 (3178045): wrapper (7.7.26015): starting
06:00:13 (3178045): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 06:00:13] Arguments: --nthreads 12
[2025-10-13 06:00:13] Threads: 12
[2025-10-13 06:00:13] Checking for CVMFS
[2025-10-13 06:00:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 06:00:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 06:00:13] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 06:00:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 06:00:13] 2.13.2.0 3683012 14079 149720 151656 1 188 38524934 40960000 5645 16776704 0 163942331 99.875 55116020 32597 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 06:00:13] CVMFS is ok
[2025-10-13 06:00:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 06:00:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 06:00:13] Further information can be found at the LHC@home message board.
[2025-10-13 06:00:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 06:00:13] Checking for apptainer binary...
[2025-10-13 06:00:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 06:00:13] Running /usr/bin/apptainer --version
[2025-10-13 06:00:13] apptainer version 1.4.3-1.el9
[2025-10-13 06:00:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 06:00:14] c8-7-4.aglt2.org
[2025-10-13 06:00:14] apptainer works
[2025-10-13 06:00:14] Set ATHENA_PROC_NUMBER=12
[2025-10-13 06:00:14] Set ATHENA_CORE_NUMBER=12
[2025-10-13 06:00:14] Starting ATLAS job with PandaID=6842411004
[2025-10-13 06:00:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 06:26:48]  *** The last 200 lines of the pilot log: ***
[2025-10-13 06:26:48] 2025-10-13 10:26:09,831 | WARNING  | process 3188373 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 06:26:48] 2025-10-13 10:26:09,831 | INFO     | using path: /tmp/boinchome/slots/7/PanDA_Pilot-6842411004/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 06:26:48] 2025-10-13 10:26:09,832 | INFO     | using path: /tmp/boinchome/slots/7/PanDA_Pilot-6842411004/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 06:26:48] 2025-10-13 10:26:09,832 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2025-10-13 06:26:48] 2025-10-13 10:26:09,832 | WARNING  | maxPSS not found in memory monitor output
[2025-10-13 06:26:48] 2025-10-13 10:26:09,833 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3959111 B
[2025-10-13 06:26:48] 2025-10-13 10:26:09,833 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15542 B
[2025-10-13 06:26:48] 2025-10-13 10:26:09,833 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2025-10-13 06:26:48] 2025-10-13 10:26:09,849 | INFO     | sufficient remaining disk space (168845901824 B)
[2025-10-13 06:26:48] 2025-10-13 10:26:09,850 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-10-13 06:26:48] 2025-10-13 10:26:09,851 | INFO     | size of work directory /tmp/boinchome/slots/7/PanDA_Pilot-6842411004: 4236817 B (within 2537553920 B limit)
[2025-10-13 06:26:48] 2025-10-13 10:26:09,851 | INFO     | pfn file=/tmp/boinchome/slots/7/PanDA_Pilot-6842411004/HITS.46676269._096176.pool.root.1 does not exist (skip from workdir size calculation)
[2025-10-13 06:26:48] 2025-10-13 10:26:09,851 | INFO     | total size of present files: 0 B (workdir size: 4236817 B)
[2025-10-13 06:26:48] 2025-10-13 10:26:09,851 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/7/PanDA_Pilot-6842411004/HITS.46676269._096176.pool.root.1 since it does not exist
[2025-10-13 06:26:48] 2025-10-13 10:26:09,934 | INFO     | time since job start (1546s) is within the limit (172800.0s)
[2025-10-13 06:26:48] 2025-10-13 10:26:10,037 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 06:26:48] 2025-10-13 10:26:10,252 | INFO     | number of running child processes to parent process 3188373: 1
[2025-10-13 06:26:48] 2025-10-13 10:26:10,252 | INFO     | maximum number of monitored processes: 6
[2025-10-13 06:26:48] 2025-10-13 10:26:11,895 | INFO     | job 6842411004 has state=finished
[2025-10-13 06:26:48] 2025-10-13 10:26:11,895 | INFO     | preparing for final server update for job 6842411004 in state='finished'
[2025-10-13 06:26:48] 2025-10-13 10:26:11,896 | INFO     | this job has now completed (state=finished)
[2025-10-13 06:26:48] 2025-10-13 10:26:11,896 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 06:26:48] 2025-10-13 10:26:11,896 | INFO     | log transfer has been attempted: DONE
[2025-10-13 06:26:48] 2025-10-13 10:26:11,896 | INFO     | job 6842411004 has finished - writing final server update
[2025-10-13 06:26:48] 2025-10-13 10:26:11,896 | INFO     | total number of processed events: 400 (read)
[2025-10-13 06:26:48] 2025-10-13 10:26:11,897 | INFO     | executing command: lscpu
[2025-10-13 06:26:48] 2025-10-13 10:26:11,940 | INFO     | time since job start (1548s) is within the limit (172800.0s)
[2025-10-13 06:26:48] 2025-10-13 10:26:11,961 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 06:26:48] 2025-10-13 10:26:12,755 | INFO     | monitor loop #118: job 0:6842411004 is in state 'finished'
[2025-10-13 06:26:48] 2025-10-13 10:26:12,756 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 06:26:48] 2025-10-13 10:26:13,945 | INFO     | time since job start (1550s) is within the limit (172800.0s)
[2025-10-13 06:26:48] 2025-10-13 10:26:15,259 | INFO     | monitor loop #119: job 0:6842411004 is in state 'finished'
[2025-10-13 06:26:48] 2025-10-13 10:26:15,259 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 06:26:48] 2025-10-13 10:26:15,390 | INFO     | PID=3181946 has CPU usage=11.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-13 06:26:48] 2025-10-13 10:26:15,390 | INFO     | .. there are 8 such processes running
[2025-10-13 06:26:48] 2025-10-13 10:26:15,516 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-13 06:26:48] 2025-10-13 10:26:15,534 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3563.84512499999
[2025-10-13 06:26:48] 2025-10-13 10:26:15,547 | INFO     | using path: /tmp/boinchome/slots/7/PanDA_Pilot-6842411004/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 06:26:48] 2025-10-13 10:26:15,548 | INFO     | extracted standard info from prmon json
[2025-10-13 06:26:48] 2025-10-13 10:26:15,548 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 06:26:48] 2025-10-13 10:26:15,548 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 06:26:48] 2025-10-13 10:26:15,548 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 06:26:48] 2025-10-13 10:26:15,548 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 06:26:48] 2025-10-13 10:26:15,549 | INFO     | fitting pss+swap vs Time
[2025-10-13 06:26:48] 2025-10-13 10:26:15,549 | INFO     | sum of square deviations: 1802824.5
[2025-10-13 06:26:48] 2025-10-13 10:26:15,549 | INFO     | sum of deviations: 36716571.0
[2025-10-13 06:26:48] 2025-10-13 10:26:15,549 | INFO     | mean x: 1760350470.5
[2025-10-13 06:26:48] 2025-10-13 10:26:15,549 | INFO     | mean y: 2355101.222222222
[2025-10-13 06:26:48] 2025-10-13 10:26:15,549 | INFO     | -- intersect: -35849183989.24202
[2025-10-13 06:26:48] 2025-10-13 10:26:15,549 | INFO     | intersect: -35849183989.24202
[2025-10-13 06:26:48] 2025-10-13 10:26:15,549 | INFO     | chi2: 0.00010613915300063207
[2025-10-13 06:26:48] 2025-10-13 10:26:15,549 | INFO     | -- intersect: -35849183989.24202
[2025-10-13 06:26:48] 2025-10-13 10:26:15,549 | INFO     | current memory leak: 20.37 B/s (using 18 data points, chi2=0.00)
[2025-10-13 06:26:48] 2025-10-13 10:26:15,550 | INFO     | could have reported an average CPU frequency of 3568 MHz (4 samples)
[2025-10-13 06:26:48] 2025-10-13 10:26:15,550 | INFO     | ..............................
[2025-10-13 06:26:48] 2025-10-13 10:26:15,550 | INFO     | . Timing measurements:
[2025-10-13 06:26:48] 2025-10-13 10:26:15,550 | INFO     | . get job = 0 s
[2025-10-13 06:26:48] 2025-10-13 10:26:15,550 | INFO     | . initial setup = 2 s
[2025-10-13 06:26:48] 2025-10-13 10:26:15,550 | INFO     | . payload setup = 4 s
[2025-10-13 06:26:48] 2025-10-13 10:26:15,550 | INFO     | . stage-in = 0 s
[2025-10-13 06:26:48] 2025-10-13 10:26:15,550 | INFO     | . payload execution = 1525 s
[2025-10-13 06:26:48] 2025-10-13 10:26:15,550 | INFO     | . stage-out = 0 s
[2025-10-13 06:26:48] 2025-10-13 10:26:15,550 | INFO     | . log creation = 0 s
[2025-10-13 06:26:48] 2025-10-13 10:26:15,550 | INFO     | ..............................
[2025-10-13 06:26:48] 2025-10-13 10:26:15,847 | INFO     | 
[2025-10-13 06:26:48] 2025-10-13 10:26:15,847 | INFO     | job summary report
[2025-10-13 06:26:48] 2025-10-13 10:26:15,847 | INFO     | --------------------------------------------------
[2025-10-13 06:26:48] 2025-10-13 10:26:15,847 | INFO     | PanDA job id: 6842411004
[2025-10-13 06:26:48] 2025-10-13 10:26:15,848 | INFO     | task id: 46676269
[2025-10-13 06:26:48] 2025-10-13 10:26:15,848 | INFO     | errors: (none)
[2025-10-13 06:26:48] 2025-10-13 10:26:15,848 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 06:26:48] 2025-10-13 10:26:15,848 | INFO     | pilot state: finished 
[2025-10-13 06:26:48] 2025-10-13 10:26:15,848 | INFO     | transexitcode: 0
[2025-10-13 06:26:48] 2025-10-13 10:26:15,848 | INFO     | exeerrorcode: 0
[2025-10-13 06:26:48] 2025-10-13 10:26:15,848 | INFO     | exeerrordiag: 
[2025-10-13 06:26:48] 2025-10-13 10:26:15,848 | INFO     | exitcode: 0
[2025-10-13 06:26:48] 2025-10-13 10:26:15,848 | INFO     | exitmsg: OK
[2025-10-13 06:26:48] 2025-10-13 10:26:15,848 | INFO     | cpuconsumptiontime: 15983 s
[2025-10-13 06:26:48] 2025-10-13 10:26:15,848 | INFO     | nevents: 400
[2025-10-13 06:26:48] 2025-10-13 10:26:15,848 | INFO     | neventsw: 0
[2025-10-13 06:26:48] 2025-10-13 10:26:15,848 | INFO     | pid: 3188373
[2025-10-13 06:26:48] 2025-10-13 10:26:15,848 | INFO     | pgrp: 3188373
[2025-10-13 06:26:48] 2025-10-13 10:26:15,848 | INFO     | corecount: 12
[2025-10-13 06:26:48] 2025-10-13 10:26:15,848 | INFO     | event service: False
[2025-10-13 06:26:48] 2025-10-13 10:26:15,848 | INFO     | sizes: {0: 2348807, 4: 2349069, 11: 2349097, 1531: 2373909, 1532: 2382991, 1538: 2383129}
[2025-10-13 06:26:48] 2025-10-13 10:26:15,848 | INFO     | --------------------------------------------------
[2025-10-13 06:26:48] 2025-10-13 10:26:15,848 | INFO     | 
[2025-10-13 06:26:48] 2025-10-13 10:26:15,848 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2025-10-13 06:26:48] 2025-10-13 10:26:15,865 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 06:26:48] 2025-10-13 10:26:15,865 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 06:26:48] 2025-10-13 10:26:15,865 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 06:26:48] 2025-10-13 10:26:15,865 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 06:26:48] 2025-10-13 10:26:15,866 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 06:26:48] 2025-10-13 10:26:15,866 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 06:26:48] 2025-10-13 10:26:15,866 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 06:26:48] 2025-10-13 10:26:15,866 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 06:26:48] 2025-10-13 10:26:15,866 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 06:26:48] 2025-10-13 10:26:15,866 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 06:26:48] 2025-10-13 10:26:15,866 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 06:26:48] 2025-10-13 10:26:15,866 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 06:26:48] 2025-10-13 10:26:15,866 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 06:26:48] 2025-10-13 10:26:15,866 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 06:26:48] 2025-10-13 10:26:15,866 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 06:26:48] 2025-10-13 10:26:15,866 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 06:26:48] 2025-10-13 10:26:15,866 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 06:26:48] 2025-10-13 10:26:15,866 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 06:26:48] 2025-10-13 10:26:15,866 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 06:26:48] 2025-10-13 10:26:15,866 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 06:26:48] 2025-10-13 10:26:15,866 | INFO     | job 6842411004 has completed (purged errors)
[2025-10-13 06:26:48] 2025-10-13 10:26:15,866 | INFO     | overall cleanup function is called
[2025-10-13 06:26:48] 2025-10-13 10:26:16,874 | INFO     | --- collectZombieJob: --- 10, [3188373]
[2025-10-13 06:26:48] 2025-10-13 10:26:16,874 | INFO     | zombie collector waiting for pid 3188373
[2025-10-13 06:26:48] 2025-10-13 10:26:16,874 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 06:26:48] 2025-10-13 10:26:16,874 | INFO     | collected zombie processes
[2025-10-13 06:26:48] 2025-10-13 10:26:16,874 | INFO     | will attempt to kill all subprocesses of pid=3188373
[2025-10-13 06:26:48] 2025-10-13 10:26:17,203 | INFO     | process IDs to be killed: [3188373] (in reverse order)
[2025-10-13 06:26:48] 2025-10-13 10:26:17,323 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 06:26:48] 2025-10-13 10:26:17,323 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 06:26:48] 2025-10-13 10:26:17,339 | INFO     | did not find any defunct processes belonging to 3188373
[2025-10-13 06:26:48] 2025-10-13 10:26:17,352 | INFO     | did not find any defunct processes belonging to 3188373
[2025-10-13 06:26:48] 2025-10-13 10:26:17,353 | INFO     | ready for new job
[2025-10-13 06:26:48] 2025-10-13 10:26:17,353 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 06:26:48] 2025-10-13 10:26:17,354 | INFO     | ***************************************
[2025-10-13 06:26:48] 2025-10-13 10:26:17,355 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 06:26:48] 2025-10-13 10:26:17,355 | INFO     | ***************************************
[2025-10-13 06:26:48] 2025-10-13 10:26:17,355 | INFO     | 
[2025-10-13 06:26:48] 2025-10-13 10:26:17,372 | INFO     | architecture information:
[2025-10-13 06:26:48] 2025-10-13 10:26:17,372 | INFO     | executing command: cat /etc/os-release
[2025-10-13 06:26:48] 2025-10-13 10:26:17,385 | INFO     | cat /etc/os-release:
[2025-10-13 06:26:48] NAME="CentOS Linux"
[2025-10-13 06:26:48] VERSION="7 (Core)"
[2025-10-13 06:26:48] ID="centos"
[2025-10-13 06:26:48] ID_LIKE="rhel fedora"
[2025-10-13 06:26:48] VERSION_ID="7"
[2025-10-13 06:26:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 06:26:48] ANSI_COLOR="0;31"
[2025-10-13 06:26:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 06:26:48] HOME_URL="https://www.centos.org/"
[2025-10-13 06:26:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 06:26:48] 
[2025-10-13 06:26:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 06:26:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 06:26:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 06:26:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 06:26:48] 
[2025-10-13 06:26:48] 2025-10-13 10:26:17,385 | INFO     | ***************************************
[2025-10-13 06:26:48] 2025-10-13 10:26:17,888 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2025-10-13 06:26:48] 2025-10-13 10:26:17,901 | INFO     | sufficient remaining disk space (168842756096 B)
[2025-10-13 06:26:48] 2025-10-13 10:26:17,901 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 06:26:48] 2025-10-13 10:26:17,901 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 06:26:48] 2025-10-13 10:26:17,901 | INFO     | update_server=False
[2025-10-13 06:26:48] 2025-10-13 10:26:17,901 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 06:26:48] 2025-10-13 10:26:17,902 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 06:26:48] 2025-10-13 10:26:18,028 | INFO     | all data control threads have been joined
[2025-10-13 06:26:48] 2025-10-13 10:26:18,038 | INFO     | all job control threads have been joined
[2025-10-13 06:26:48] 2025-10-13 10:26:18,530 | INFO     | all payload control threads have been joined
[2025-10-13 06:26:48] 2025-10-13 10:26:18,767 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:26:48] 2025-10-13 10:26:18,767 | INFO     | aborting loop
[2025-10-13 06:26:48] 2025-10-13 10:26:18,903 | INFO     | [job] retrieve thread has finished
[2025-10-13 06:26:48] 2025-10-13 10:26:19,034 | INFO     | [data] control thread has finished
[2025-10-13 06:26:48] 2025-10-13 10:26:19,043 | INFO     | [job] control thread has finished
[2025-10-13 06:26:48] 2025-10-13 10:26:19,045 | INFO     | [payload] failed_post thread has finished
[2025-10-13 06:26:48] 2025-10-13 10:26:19,211 | INFO     | [data] copytool_in thread has finished
[2025-10-13 06:26:48] 2025-10-13 10:26:19,535 | INFO     | [payload] control thread has finished
[2025-10-13 06:26:48] 2025-10-13 10:26:19,596 | INFO     | [payload] validate_post thread has finished
[2025-10-13 06:26:48] 2025-10-13 10:26:19,772 | INFO     | [job] job monitor thread has finished
[2025-10-13 06:26:48] 2025-10-13 10:26:19,862 | INFO     | [job] validate thread has finished
[2025-10-13 06:26:48] 2025-10-13 10:26:19,907 | INFO     | [data] copytool_out thread has finished
[2025-10-13 06:26:48] 2025-10-13 10:26:20,020 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 06:26:48] 2025-10-13 10:26:20,160 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 06:26:48] 2025-10-13 10:26:20,361 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 06:26:48] 2025-10-13 10:26:20,611 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 06:26:48] 2025-10-13 10:26:20,616 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:26:48] 2025-10-13 10:26:21,622 | INFO     | [job] queue monitor thread has finished
[2025-10-13 06:26:48] 2025-10-13 10:26:24,617 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 06:26:48] 2025-10-13 10:26:25,046 | INFO     | [monitor] cgroup control has ended
[2025-10-13 06:26:48] 2025-10-13 10:26:28,574 | INFO     | job.realtimelogging is not enabled
[2025-10-13 06:26:48] 2025-10-13 10:26:29,580 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 06:26:48] 2025-10-13 10:26:31,477 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140016582653760)>', '<ExcThread(monitor, started 140015799629568)>']
[2025-10-13 06:26:48] 2025-10-13 10:26:36,502 | INFO     | all workflow threads have been joined
[2025-10-13 06:26:48] 2025-10-13 10:26:36,503 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 06:26:48] 2025-10-13 10:26:36,503 | INFO     | traces error code: 0
[2025-10-13 06:26:48] 2025-10-13 10:26:36,503 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 06:26:48] 2025-10-13 10:26:47,887 | INFO     | PID=3181946 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 06:26:48] 2025-10-13 10:26:47,887 | INFO     | .. there are 8 such processes running
[2025-10-13 06:26:48] 2025-10-13 10:26:47,887 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 06:26:48] 2025-10-13 10:26:47,887 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 06:26:48] 2025-10-13 10:26:47,887 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 06:26:48] 2025-10-13 10:26:47,887 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 06:26:48] 2025-10-13 10:26:47,887 | INFO     | [monitor] control thread has ended
[2025-10-13 06:26:48] 2025-10-13 10:26:47,977 [wrapper] ==== pilot stdout END ====
[2025-10-13 06:26:48] 2025-10-13 10:26:47,979 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 06:26:48] 2025-10-13 10:26:47,982 [wrapper] pilotpid: 3181946
[2025-10-13 06:26:48] 2025-10-13 10:26:47,984 [wrapper] Pilot exit status: 0
[2025-10-13 06:26:48] 2025-10-13 10:26:47,993 [wrapper] pandaids: 6842411004
[2025-10-13 06:26:48] 2025-10-13 10:26:48,077 [wrapper] cleanup supervisor_pilot 3281224 3181947
[2025-10-13 06:26:48] 2025-10-13 10:26:48,081 [wrapper] Test setup, not cleaning
[2025-10-13 06:26:48] 2025-10-13 10:26:48,083 [wrapper] apfmon messages muted
[2025-10-13 06:26:48] 2025-10-13 10:26:48,085 [wrapper] ==== wrapper stdout END ====
[2025-10-13 06:26:48] 2025-10-13 10:26:48,087 [wrapper] ==== wrapper stderr END ====
[2025-10-13 06:26:48]  *** Error codes and diagnostics ***
[2025-10-13 06:26:48]     "exeErrorCode": 0,
[2025-10-13 06:26:48]     "exeErrorDiag": "",
[2025-10-13 06:26:48]     "pilotErrorCode": 0,
[2025-10-13 06:26:48]     "pilotErrorDiag": "",
[2025-10-13 06:26:48]  *** Listing of results directory ***
[2025-10-13 06:26:48] total 409164
[2025-10-13 06:26:48] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 23:15 pilot3.tar.gz
[2025-10-13 06:26:48] -rwx------. 1 boincer umatlas     36292 Oct 12 23:53 runpilot2-wrapper.sh
[2025-10-13 06:26:48] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 23:53 queuedata.json
[2025-10-13 06:26:48] -rw-r--r--. 1 boincer umatlas       100 Oct 13 06:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 06:26:48] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 06:00 run_atlas
[2025-10-13 06:26:48] -rw-r--r--. 1 boincer umatlas       105 Oct 13 06:00 job.xml
[2025-10-13 06:26:48] -rw-r--r--. 2 boincer umatlas 221879134 Oct 13 06:00 EVNT.46676267._003184.pool.root.1
[2025-10-13 06:26:48] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 06:00 start_atlas.sh
[2025-10-13 06:26:48] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 06:00 shared
[2025-10-13 06:26:48] -rw-r--r--. 2 boincer umatlas    569689 Oct 13 06:00 input.tar.gz
[2025-10-13 06:26:48] -rw-r--r--. 1 boincer umatlas         0 Oct 13 06:00 boinc_lockfile
[2025-10-13 06:26:48] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 06:00 pandaJob.out
[2025-10-13 06:26:48] -rw-------. 1 boincer umatlas    972849 Oct 13 06:00 agis_schedconf.cvmfs.json
[2025-10-13 06:26:48] -rw-------. 1 boincer umatlas   1560580 Oct 13 06:00 agis_ddmendpoints.agis.ALL.json
[2025-10-13 06:26:48] drwx------. 5 boincer umatlas      4096 Oct 13 06:00 pilot3
[2025-10-13 06:26:48] -rw-r--r--. 1 boincer umatlas      7164 Oct 13 06:19 init_data.xml
[2025-10-13 06:26:48] -rw-------. 1 boincer umatlas 192023896 Oct 13 06:25 HITS.46676269._096176.pool.root.1
[2025-10-13 06:26:48] -rw-r--r--. 1 boincer umatlas       529 Oct 13 06:25 boinc_task_state.xml
[2025-10-13 06:26:48] -rw-------. 1 boincer umatlas        95 Oct 13 06:25 pilot_heartbeat.json
[2025-10-13 06:26:48] -rw-------. 1 boincer umatlas      1028 Oct 13 06:26 memory_monitor_summary.json
[2025-10-13 06:26:48] -rw-------. 1 boincer umatlas    331076 Oct 13 06:26 log.46676269._096176.job.log.tgz.1
[2025-10-13 06:26:48] -rw-------. 1 boincer umatlas      7772 Oct 13 06:26 heartbeat.json
[2025-10-13 06:26:48] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 06:26 boinc_mmap_file
[2025-10-13 06:26:48] -rw-------. 1 boincer umatlas       822 Oct 13 06:26 pilotlog.txt
[2025-10-13 06:26:48] -rw-r--r--. 1 boincer umatlas        27 Oct 13 06:26 wrapper_checkpoint.txt
[2025-10-13 06:26:48] -rw-------. 1 boincer umatlas    264171 Oct 13 06:26 log.46676269._096176.job.log.1
[2025-10-13 06:26:48] -rw-------. 1 boincer umatlas       357 Oct 13 06:26 output.list
[2025-10-13 06:26:48] -rw-r--r--. 1 boincer umatlas       620 Oct 13 06:26 runtime_log
[2025-10-13 06:26:48] -rw-------. 1 boincer umatlas    614400 Oct 13 06:26 result.tar.gz
[2025-10-13 06:26:48] -rw-r--r--. 1 boincer umatlas      8695 Oct 13 06:26 runtime_log.err
[2025-10-13 06:26:48] -rw-------. 1 boincer umatlas       647 Oct 13 06:26 MZSNDmYnOS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm1fmNDmfQfonm.diag
[2025-10-13 06:26:48] -rw-r--r--. 1 boincer umatlas     22480 Oct 13 06:26 stderr.txt
[2025-10-13 06:26:48] HITS file was successfully produced:
[2025-10-13 06:26:48] -rw-------. 1 boincer umatlas 192023896 Oct 13 06:25 shared/HITS.pool.root.1
[2025-10-13 06:26:48]  *** Contents of shared directory: ***
[2025-10-13 06:26:48] total 405384
[2025-10-13 06:26:48] -rw-r--r--. 2 boincer umatlas 221879134 Oct 13 06:00 ATLAS.root_0
[2025-10-13 06:26:48] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 06:00 start_atlas.sh
[2025-10-13 06:26:48] -rw-r--r--. 2 boincer umatlas    569689 Oct 13 06:00 input.tar.gz
[2025-10-13 06:26:48] -rw-------. 1 boincer umatlas 192023896 Oct 13 06:25 HITS.pool.root.1
[2025-10-13 06:26:48] -rw-------. 1 boincer umatlas    614400 Oct 13 06:26 result.tar.gz
06:26:49 (3178045): run_atlas exited; CPU time 16010.862713
06:26:49 (3178045): called boinc_finish(0)

</stderr_txt>
]]>

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