Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
11:35:25 (1414964): wrapper (7.7.26015): starting
11:35:25 (1414964): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 11:35:25] Arguments: --nthreads 8
[2025-10-13 11:35:25] Threads: 8
[2025-10-13 11:35:25] Checking for CVMFS
[2025-10-13 11:35:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 11:35:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 11:35:26] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 11:35:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 11:35:27] 2.11.5.0 4319 932 177692 151656 1 188 2702121 4194305 20186 130560 0 12811495 99.999 31157 378 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://127.0.0.1:3128 1
[2025-10-13 11:35:27] CVMFS is ok
[2025-10-13 11:35:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 11:35:27] Checking for apptainer binary...
[2025-10-13 11:35:27] apptainer is not installed, using version from CVMFS
[2025-10-13 11:35:27] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 11:35:28] mikemint-desktop
[2025-10-13 11:35:28] apptainer works
[2025-10-13 11:35:28] Set ATHENA_PROC_NUMBER=8
[2025-10-13 11:35:28] Set ATHENA_CORE_NUMBER=8
[2025-10-13 11:35:28] Starting ATLAS job with PandaID=6839987858
[2025-10-13 11:35:28] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/18 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 14:05:13]  *** The last 200 lines of the pilot log: ***
[2025-10-13 14:05:13] 2025-10-13 12:04:24,865 | INFO     | monitor loop #595: job 0:6839987858 is in state 'finished'
[2025-10-13 14:05:13] 2025-10-13 12:04:24,865 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 14:05:13] 2025-10-13 12:04:25,121 | INFO     | time since job start (8852s) is within the limit (172800.0s)
[2025-10-13 14:05:13] 2025-10-13 12:04:26,061 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 14:05:13] 2025-10-13 12:04:26,080 | INFO     | found 64 cores (64 cores per socket, 1 socket) HT, CPU MHz: 2466.0031718750006
[2025-10-13 14:05:13] 2025-10-13 12:04:26,106 | INFO     | using path: /var/lib/boinc-client/slots/18/PanDA_Pilot-6839987858/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 14:05:13] 2025-10-13 12:04:26,106 | INFO     | extracted standard info from prmon json
[2025-10-13 14:05:13] 2025-10-13 12:04:26,106 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 14:05:13] 2025-10-13 12:04:26,106 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 14:05:13] 2025-10-13 12:04:26,107 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 14:05:13] 2025-10-13 12:04:26,107 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 14:05:13] 2025-10-13 12:04:26,109 | INFO     | fitting pss+swap vs Time
[2025-10-13 14:05:13] 2025-10-13 12:04:26,109 | INFO     | sum of square deviations: 887813855.5
[2025-10-13 14:05:13] 2025-10-13 12:04:26,110 | INFO     | sum of deviations: 36330987163.5
[2025-10-13 14:05:13] 2025-10-13 12:04:26,110 | INFO     | mean x: 1760352741.5
[2025-10-13 14:05:13] 2025-10-13 12:04:26,110 | INFO     | mean y: 2404434.3309859154
[2025-10-13 14:05:13] 2025-10-13 12:04:26,110 | INFO     | -- intersect: -72034489852.0846
[2025-10-13 14:05:13] 2025-10-13 12:04:26,110 | INFO     | intersect: -72034489852.0846
[2025-10-13 14:05:13] 2025-10-13 12:04:26,111 | INFO     | chi2: 3.7225145900053507
[2025-10-13 14:05:13] 2025-10-13 12:04:26,111 | INFO     | sum of square deviations: 797291228.0
[2025-10-13 14:05:13] 2025-10-13 12:04:26,111 | INFO     | sum of deviations: 44069595118.99999
[2025-10-13 14:05:13] 2025-10-13 12:04:26,112 | INFO     | mean x: 1760352589.0
[2025-10-13 14:05:13] 2025-10-13 12:04:26,112 | INFO     | mean y: 2417013.5401459853
[2025-10-13 14:05:13] 2025-10-13 12:04:26,112 | INFO     | -- intersect: -97299576460.68556
[2025-10-13 14:05:13] 2025-10-13 12:04:26,112 | INFO     | intersect: -97299576460.68556
[2025-10-13 14:05:13] 2025-10-13 12:04:26,112 | INFO     | chi2: 2.9484394040547306
[2025-10-13 14:05:13] 2025-10-13 12:04:26,112 | INFO     | current chi2=2.9484394040547306 (change=20.79441644175013 %)
[2025-10-13 14:05:13] 2025-10-13 12:04:26,112 | INFO     | right removable region: 136
[2025-10-13 14:05:13] 2025-10-13 12:04:26,112 | INFO     | sum of square deviations: 797291228.0
[2025-10-13 14:05:13] 2025-10-13 12:04:26,113 | INFO     | sum of deviations: 457335727.0000019
[2025-10-13 14:05:13] 2025-10-13 12:04:26,113 | INFO     | mean x: 1760352894.0
[2025-10-13 14:05:13] 2025-10-13 12:04:26,113 | INFO     | mean y: 2464449.9124087594
[2025-10-13 14:05:13] 2025-10-13 12:04:26,113 | INFO     | -- intersect: -1007294898.0909125
[2025-10-13 14:05:13] 2025-10-13 12:04:26,113 | INFO     | intersect: -1007294898.0909125
[2025-10-13 14:05:13] 2025-10-13 12:04:26,114 | INFO     | chi2: 0.9187523050730417
[2025-10-13 14:05:13] 2025-10-13 12:04:26,114 | INFO     | current chi2=0.9187523050730417 (change=75.31904085641955 %)
[2025-10-13 14:05:13] 2025-10-13 12:04:26,114 | INFO     | sum of square deviations: 713140813.0
[2025-10-13 14:05:13] 2025-10-13 12:04:26,114 | INFO     | sum of deviations: -6036302214.000001
[2025-10-13 14:05:13] 2025-10-13 12:04:26,115 | INFO     | mean x: 1760353046.5
[2025-10-13 14:05:13] 2025-10-13 12:04:26,115 | INFO     | mean y: 2476118.242424242
[2025-10-13 14:05:13] 2025-10-13 12:04:26,115 | INFO     | -- intersect: 14902791453.314402
[2025-10-13 14:05:13] 2025-10-13 12:04:26,115 | INFO     | intersect: 14902791453.314402
[2025-10-13 14:05:13] 2025-10-13 12:04:26,115 | INFO     | chi2: 0.8265929107206442
[2025-10-13 14:05:13] 2025-10-13 12:04:26,115 | INFO     | current chi2=0.8265929107206442 (change=10.030929320506111 %)
[2025-10-13 14:05:13] 2025-10-13 12:04:26,115 | INFO     | left removable region: 20
[2025-10-13 14:05:13] 2025-10-13 12:04:26,115 | INFO     | sum of square deviations: 483971865.0
[2025-10-13 14:05:13] 2025-10-13 12:04:26,116 | INFO     | sum of deviations: 1633980495.5
[2025-10-13 14:05:13] 2025-10-13 12:04:26,116 | INFO     | mean x: 1760353168.5
[2025-10-13 14:05:13] 2025-10-13 12:04:26,116 | INFO     | mean y: 2494369.043103448
[2025-10-13 14:05:13] 2025-10-13 12:04:26,116 | INFO     | -- intersect: -5940790665.760779
[2025-10-13 14:05:13] 2025-10-13 12:04:26,116 | INFO     | intersect: -5940790665.760779
[2025-10-13 14:05:13] 2025-10-13 12:04:26,116 | INFO     | chi2: 0.0006620303516532652
[2025-10-13 14:05:13] 2025-10-13 12:04:26,116 | INFO     | -- intersect: -5940790665.760779
[2025-10-13 14:05:13] 2025-10-13 12:04:26,116 | INFO     | current memory leak: 3.38 B/s (using 116 data points, chi2=0.00)
[2025-10-13 14:05:13] 2025-10-13 12:04:26,117 | INFO     | could have reported an average CPU frequency of 2377 MHz (8 samples)
[2025-10-13 14:05:13] 2025-10-13 12:04:26,117 | INFO     | ..............................
[2025-10-13 14:05:13] 2025-10-13 12:04:26,117 | INFO     | . Timing measurements:
[2025-10-13 14:05:13] 2025-10-13 12:04:26,117 | INFO     | . get job = 0 s
[2025-10-13 14:05:13] 2025-10-13 12:04:26,117 | INFO     | . initial setup = 3 s
[2025-10-13 14:05:13] 2025-10-13 12:04:26,117 | INFO     | . payload setup = 62 s
[2025-10-13 14:05:13] 2025-10-13 12:04:26,117 | INFO     | . stage-in = 0 s
[2025-10-13 14:05:13] 2025-10-13 12:04:26,117 | INFO     | . payload execution = 8673 s
[2025-10-13 14:05:13] 2025-10-13 12:04:26,117 | INFO     | . stage-out = 0 s
[2025-10-13 14:05:13] 2025-10-13 12:04:26,117 | INFO     | . log creation = 0 s
[2025-10-13 14:05:13] 2025-10-13 12:04:26,118 | INFO     | ..............................
[2025-10-13 14:05:13] 2025-10-13 12:04:26,515 | INFO     | 
[2025-10-13 14:05:13] 2025-10-13 12:04:26,516 | INFO     | job summary report
[2025-10-13 14:05:13] 2025-10-13 12:04:26,516 | INFO     | --------------------------------------------------
[2025-10-13 14:05:13] 2025-10-13 12:04:26,516 | INFO     | PanDA job id: 6839987858
[2025-10-13 14:05:13] 2025-10-13 12:04:26,516 | INFO     | task id: 46676269
[2025-10-13 14:05:13] 2025-10-13 12:04:26,516 | INFO     | errors: (none)
[2025-10-13 14:05:13] 2025-10-13 12:04:26,516 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 14:05:13] 2025-10-13 12:04:26,516 | INFO     | pilot state: finished 
[2025-10-13 14:05:13] 2025-10-13 12:04:26,516 | INFO     | transexitcode: 0
[2025-10-13 14:05:13] 2025-10-13 12:04:26,516 | INFO     | exeerrorcode: 0
[2025-10-13 14:05:13] 2025-10-13 12:04:26,516 | INFO     | exeerrordiag: 
[2025-10-13 14:05:13] 2025-10-13 12:04:26,516 | INFO     | exitcode: 0
[2025-10-13 14:05:13] 2025-10-13 12:04:26,516 | INFO     | exitmsg: OK
[2025-10-13 14:05:13] 2025-10-13 12:04:26,516 | INFO     | cpuconsumptiontime: 45434 s
[2025-10-13 14:05:13] 2025-10-13 12:04:26,517 | INFO     | nevents: 400
[2025-10-13 14:05:13] 2025-10-13 12:04:26,517 | INFO     | neventsw: 0
[2025-10-13 14:05:13] 2025-10-13 12:04:26,517 | INFO     | pid: 1456177
[2025-10-13 14:05:13] 2025-10-13 12:04:26,517 | INFO     | pgrp: 1456177
[2025-10-13 14:05:13] 2025-10-13 12:04:26,517 | INFO     | corecount: 8
[2025-10-13 14:05:13] 2025-10-13 12:04:26,517 | INFO     | event service: False
[2025-10-13 14:05:13] 2025-10-13 12:04:26,517 | INFO     | sizes: {0: 2348694, 1: 2348893, 2: 2348893, 12: 2348921, 23: 2348949, 34: 2348977, 45: 2349133, 54: 2349423, 55: 2349451, 8738: 2377655, 8739: 2387004, 8740: 23870
[2025-10-13 14:05:13] 2025-10-13 12:04:26,517 | INFO     | --------------------------------------------------
[2025-10-13 14:05:13] 2025-10-13 12:04:26,517 | INFO     | 
[2025-10-13 14:05:13] 2025-10-13 12:04:26,517 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/18
[2025-10-13 14:05:13] 2025-10-13 12:04:26,537 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 14:05:13] 2025-10-13 12:04:26,538 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 14:05:13] 2025-10-13 12:04:26,538 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 14:05:13] 2025-10-13 12:04:26,538 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 14:05:13] 2025-10-13 12:04:26,538 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 14:05:13] 2025-10-13 12:04:26,538 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 14:05:13] 2025-10-13 12:04:26,538 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 14:05:13] 2025-10-13 12:04:26,538 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 14:05:13] 2025-10-13 12:04:26,545 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 14:05:13] 2025-10-13 12:04:26,545 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 14:05:13] 2025-10-13 12:04:26,545 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 14:05:13] 2025-10-13 12:04:26,545 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 14:05:13] 2025-10-13 12:04:26,545 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 14:05:13] 2025-10-13 12:04:26,545 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 14:05:13] 2025-10-13 12:04:26,545 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 14:05:13] 2025-10-13 12:04:26,545 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 14:05:13] 2025-10-13 12:04:26,545 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 14:05:13] 2025-10-13 12:04:26,546 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 14:05:13] 2025-10-13 12:04:26,546 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 14:05:13] 2025-10-13 12:04:26,546 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 14:05:13] 2025-10-13 12:04:26,546 | INFO     | job 6839987858 has completed (purged errors)
[2025-10-13 14:05:13] 2025-10-13 12:04:26,546 | INFO     | overall cleanup function is called
[2025-10-13 14:05:13] 2025-10-13 12:04:27,553 | INFO     | --- collectZombieJob: --- 10, [1456177]
[2025-10-13 14:05:13] 2025-10-13 12:04:27,553 | INFO     | zombie collector waiting for pid 1456177
[2025-10-13 14:05:13] 2025-10-13 12:04:27,553 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 14:05:13] 2025-10-13 12:04:27,553 | INFO     | collected zombie processes
[2025-10-13 14:05:13] 2025-10-13 12:04:27,553 | INFO     | will attempt to kill all subprocesses of pid=1456177
[2025-10-13 14:05:13] 2025-10-13 12:04:27,908 | INFO     | process IDs to be killed: [1456177] (in reverse order)
[2025-10-13 14:05:13] 2025-10-13 12:04:28,039 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 14:05:13] 2025-10-13 12:04:28,040 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 14:05:13] 2025-10-13 12:04:28,052 | INFO     | did not find any defunct processes belonging to 1456177
[2025-10-13 14:05:13] 2025-10-13 12:04:28,067 | INFO     | did not find any defunct processes belonging to 1456177
[2025-10-13 14:05:13] 2025-10-13 12:04:28,068 | INFO     | ready for new job
[2025-10-13 14:05:13] 2025-10-13 12:04:28,068 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 14:05:13] 2025-10-13 12:04:28,069 | INFO     | ***************************************
[2025-10-13 14:05:13] 2025-10-13 12:04:28,069 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 14:05:13] 2025-10-13 12:04:28,069 | INFO     | ***************************************
[2025-10-13 14:05:13] 2025-10-13 12:04:28,069 | INFO     | 
[2025-10-13 14:05:13] 2025-10-13 12:04:28,077 | INFO     | architecture information:
[2025-10-13 14:05:13] 2025-10-13 12:04:28,078 | INFO     | executing command: cat /etc/os-release
[2025-10-13 14:05:13] 2025-10-13 12:04:28,094 | INFO     | cat /etc/os-release:
[2025-10-13 14:05:13] NAME="CentOS Linux"
[2025-10-13 14:05:13] VERSION="7 (Core)"
[2025-10-13 14:05:13] ID="centos"
[2025-10-13 14:05:13] ID_LIKE="rhel fedora"
[2025-10-13 14:05:13] VERSION_ID="7"
[2025-10-13 14:05:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 14:05:13] ANSI_COLOR="0;31"
[2025-10-13 14:05:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 14:05:13] HOME_URL="https://www.centos.org/"
[2025-10-13 14:05:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 14:05:13] 
[2025-10-13 14:05:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 14:05:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 14:05:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 14:05:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 14:05:13] 
[2025-10-13 14:05:13] 2025-10-13 12:04:28,095 | INFO     | ***************************************
[2025-10-13 14:05:13] 2025-10-13 12:04:28,597 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/18
[2025-10-13 14:05:13] 2025-10-13 12:04:28,615 | INFO     | sufficient remaining disk space (202675060736 B)
[2025-10-13 14:05:13] 2025-10-13 12:04:28,616 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 14:05:13] 2025-10-13 12:04:28,616 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 14:05:13] 2025-10-13 12:04:28,616 | INFO     | update_server=False
[2025-10-13 14:05:13] 2025-10-13 12:04:28,616 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 14:05:13] 2025-10-13 12:04:28,616 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 14:05:13] 2025-10-13 12:04:28,617 | INFO     | aborting loop
[2025-10-13 14:05:13] 2025-10-13 12:04:28,853 | INFO     | all payload control threads have been joined
[2025-10-13 14:05:13] 2025-10-13 12:04:29,104 | INFO     | all job control threads have been joined
[2025-10-13 14:05:13] 2025-10-13 12:04:29,493 | INFO     | all data control threads have been joined
[2025-10-13 14:05:13] 2025-10-13 12:04:29,621 | INFO     | [job] job monitor thread has finished
[2025-10-13 14:05:13] 2025-10-13 12:04:29,621 | INFO     | [job] retrieve thread has finished
[2025-10-13 14:05:13] 2025-10-13 12:04:29,645 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 14:05:13] 2025-10-13 12:04:29,661 | INFO     | [job] validate thread has finished
[2025-10-13 14:05:13] 2025-10-13 12:04:29,859 | INFO     | [payload] control thread has finished
[2025-10-13 14:05:13] 2025-10-13 12:04:29,905 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 14:05:13] 2025-10-13 12:04:30,037 | INFO     | [data] copytool_in thread has finished
[2025-10-13 14:05:13] 2025-10-13 12:04:30,109 | INFO     | [job] control thread has finished
[2025-10-13 14:05:13] 2025-10-13 12:04:30,113 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 14:05:13] 2025-10-13 12:04:30,381 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 14:05:13] 2025-10-13 12:04:30,497 | INFO     | [data] control thread has finished
[2025-10-13 14:05:13] 2025-10-13 12:04:30,597 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 14:05:13] 2025-10-13 12:04:30,633 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 14:05:13] 2025-10-13 12:04:30,837 | INFO     | [payload] failed_post thread has finished
[2025-10-13 14:05:13] 2025-10-13 12:04:30,889 | INFO     | [payload] validate_post thread has finished
[2025-10-13 14:05:13] 2025-10-13 12:04:31,213 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 14:05:13] 2025-10-13 12:04:31,909 | INFO     | [data] copytool_out thread has finished
[2025-10-13 14:05:13] 2025-10-13 12:04:32,217 | INFO     | [job] queue monitor thread has finished
[2025-10-13 14:05:13] 2025-10-13 12:04:34,387 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 14:05:13] 2025-10-13 12:04:58,639 | INFO     | PID=1429447 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 14:05:13] 2025-10-13 12:04:58,639 | INFO     | .. there are 8 such processes running
[2025-10-13 14:05:13] 2025-10-13 12:04:58,640 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 14:05:13] 2025-10-13 12:04:58,640 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 14:05:13] 2025-10-13 12:04:58,640 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 14:05:13] 2025-10-13 12:05:08,313 | INFO     | [monitor] cgroup control has ended
[2025-10-13 14:05:13] 2025-10-13 12:05:08,445 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139949674493760)>', '<ExcThread(monitor, started 139949009524480)>']
[2025-10-13 14:05:13] 2025-10-13 12:05:08,681 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 14:05:13] 2025-10-13 12:05:08,681 | INFO     | [monitor] control thread has ended
[2025-10-13 14:05:13] 2025-10-13 12:05:13,469 | INFO     | all workflow threads have been joined
[2025-10-13 14:05:13] 2025-10-13 12:05:13,469 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 14:05:13] 2025-10-13 12:05:13,469 | INFO     | traces error code: 0
[2025-10-13 14:05:13] 2025-10-13 12:05:13,469 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 14:05:13] 2025-10-13 12:05:13,583 [wrapper] ==== pilot stdout END ====
[2025-10-13 14:05:13] 2025-10-13 12:05:13,587 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 14:05:13] 2025-10-13 12:05:13,591 [wrapper] pilotpid: 1429447
[2025-10-13 14:05:13] 2025-10-13 12:05:13,594 [wrapper] Pilot exit status: 0
[2025-10-13 14:05:13] 2025-10-13 12:05:13,611 [wrapper] pandaids: 6839987858
[2025-10-13 14:05:13] 2025-10-13 12:05:13,698 [wrapper] cleanup supervisor_pilot 1864826 1429448
[2025-10-13 14:05:13] 2025-10-13 12:05:13,701 [wrapper] Test setup, not cleaning
[2025-10-13 14:05:13] 2025-10-13 12:05:13,703 [wrapper] apfmon messages muted
[2025-10-13 14:05:13] 2025-10-13 12:05:13,706 [wrapper] ==== wrapper stdout END ====
[2025-10-13 14:05:13] 2025-10-13 12:05:13,709 [wrapper] ==== wrapper stderr END ====
[2025-10-13 14:05:13]  *** Error codes and diagnostics ***
[2025-10-13 14:05:13]     "exeErrorCode": 0,
[2025-10-13 14:05:13]     "exeErrorDiag": "",
[2025-10-13 14:05:13]     "pilotErrorCode": 0,
[2025-10-13 14:05:13]     "pilotErrorDiag": "",
[2025-10-13 14:05:13]  *** Listing of results directory ***
[2025-10-13 14:05:13] insgesamt 412636
[2025-10-13 14:05:13] -rw-r--r-- 1 boinc boinc    557409 Okt 12 14:10 pilot3.tar.gz
[2025-10-13 14:05:13] -rw-r--r-- 1 boinc boinc      5112 Okt 12 14:34 queuedata.json
[2025-10-13 14:05:13] -rwx------ 1 boinc boinc     36292 Okt 12 14:35 runpilot2-wrapper.sh
[2025-10-13 14:05:13] -rw-r--r-- 1 boinc boinc       100 Okt 13 11:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 14:05:13] -rwxr-xr-x 1 boinc boinc      7986 Okt 13 11:35 run_atlas
[2025-10-13 14:05:13] -rw-r--r-- 1 boinc boinc       105 Okt 13 11:35 job.xml
[2025-10-13 14:05:13] -rw-r--r-- 2 boinc boinc 220365281 Okt 13 11:35 EVNT.46676267._003783.pool.root.1
[2025-10-13 14:05:13] -rw-r--r-- 2 boinc boinc     15120 Okt 13 11:35 start_atlas.sh
[2025-10-13 14:05:13] drwxrwx--x 2 boinc boinc      4096 Okt 13 11:35 shared
[2025-10-13 14:05:13] -rw-r--r-- 2 boinc boinc    569680 Okt 13 11:35 input.tar.gz
[2025-10-13 14:05:13] -rw-r--r-- 1 boinc boinc         0 Okt 13 11:35 boinc_lockfile
[2025-10-13 14:05:13] -rw-r--r-- 1 boinc boinc      2550 Okt 13 11:35 pandaJob.out
[2025-10-13 14:05:13] -rw------- 1 boinc boinc    972849 Okt 13 11:36 agis_schedconf.cvmfs.json
[2025-10-13 14:05:13] -rw------- 1 boinc boinc   1560580 Okt 13 11:36 agis_ddmendpoints.agis.ALL.json
[2025-10-13 14:05:13] drwx------ 5 boinc boinc      4096 Okt 13 11:36 pilot3
[2025-10-13 14:05:13] -rw-r--r-- 1 boinc boinc      6670 Okt 13 11:41 init_data.xml
[2025-10-13 14:05:13] -rw------- 1 boinc boinc 195109562 Okt 13 14:03 HITS.46676269._078202.pool.root.1
[2025-10-13 14:05:13] -rw-r--r-- 1 boinc boinc       530 Okt 13 14:03 boinc_task_state.xml
[2025-10-13 14:05:13] -rw------- 1 boinc boinc      1027 Okt 13 14:04 memory_monitor_summary.json
[2025-10-13 14:05:13] -rw------- 1 boinc boinc    390660 Okt 13 14:04 log.46676269._078202.job.log.tgz.1
[2025-10-13 14:05:13] -rw------- 1 boinc boinc      7753 Okt 13 14:04 heartbeat.json
[2025-10-13 14:05:13] -rw------- 1 boinc boinc        95 Okt 13 14:04 pilot_heartbeat.json
[2025-10-13 14:05:13] -rw-r--r-- 1 boinc boinc        27 Okt 13 14:05 wrapper_checkpoint.txt
[2025-10-13 14:05:13] -rw------- 1 boinc boinc      4832 Okt 13 14:05 pilotlog.txt
[2025-10-13 14:05:13] -rw------- 1 boinc boinc   1190741 Okt 13 14:05 log.46676269._078202.job.log.1
[2025-10-13 14:05:13] -rw------- 1 boinc boinc       357 Okt 13 14:05 output.list
[2025-10-13 14:05:13] -rw-r--r-- 1 boinc boinc       620 Okt 13 14:05 runtime_log
[2025-10-13 14:05:13] -rw------- 1 boinc boinc   1597440 Okt 13 14:05 result.tar.gz
[2025-10-13 14:05:13] -rw-r--r-- 1 boinc boinc      8856 Okt 13 14:05 runtime_log.err
[2025-10-13 14:05:13] -rw------- 1 boinc boinc       664 Okt 13 14:05 5SzKDmFTAS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmzmjNDm7v7qJn.diag
[2025-10-13 14:05:13] -rw-r--r-- 1 boinc boinc      8192 Okt 13 14:05 boinc_mmap_file
[2025-10-13 14:05:13] -rw-r--r-- 1 boinc boinc     20908 Okt 13 14:05 stderr.txt
[2025-10-13 14:05:13] HITS file was successfully produced:
[2025-10-13 14:05:13] -rw------- 1 boinc boinc 195109562 Okt 13 14:03 shared/HITS.pool.root.1
[2025-10-13 14:05:13]  *** Contents of shared directory: ***
[2025-10-13 14:05:13] insgesamt 407888
[2025-10-13 14:05:13] -rw-r--r-- 2 boinc boinc 220365281 Okt 13 11:35 ATLAS.root_0
[2025-10-13 14:05:13] -rw-r--r-- 2 boinc boinc     15120 Okt 13 11:35 start_atlas.sh
[2025-10-13 14:05:13] -rw-r--r-- 2 boinc boinc    569680 Okt 13 11:35 input.tar.gz
[2025-10-13 14:05:13] -rw------- 1 boinc boinc 195109562 Okt 13 14:03 HITS.pool.root.1
[2025-10-13 14:05:13] -rw------- 1 boinc boinc   1597440 Okt 13 14:05 result.tar.gz
14:05:15 (1414964): run_atlas exited; CPU time 45955.243965
14:05:15 (1414964): called boinc_finish(0)

</stderr_txt>
]]>

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