Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:16:05 (2252503): wrapper (7.7.26015): starting
06:16:05 (2252503): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 06:16:05] Arguments: --nthreads 8
[2025-10-13 06:16:05] Threads: 8
[2025-10-13 06:16:05] Checking for CVMFS
[2025-10-13 06:16:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 06:16:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 06:16:05] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 06:16:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 06:16:05] 2.13.2.0 9460 35537 230864 151658 3 11 32073579 32935936 2765 16776704 0 104488353 99.707 79626203 30073 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 06:16:05] CVMFS is ok
[2025-10-13 06:16:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 06:16:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 06:16:05] Further information can be found at the LHC@home message board.
[2025-10-13 06:16:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 06:16:05] Checking for apptainer binary...
[2025-10-13 06:16:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 06:16:05] Running /usr/bin/apptainer --version
[2025-10-13 06:16:05] apptainer version 1.4.3-1.el9
[2025-10-13 06:16:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 06:16:05] c-4-11.aglt2.org
[2025-10-13 06:16:05] apptainer works
[2025-10-13 06:16:05] Set ATHENA_PROC_NUMBER=8
[2025-10-13 06:16:05] Set ATHENA_CORE_NUMBER=8
[2025-10-13 06:16:05] Starting ATLAS job with PandaID=6841070318
[2025-10-13 06:16:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 07:27:35]  *** The last 200 lines of the pilot log: ***
[2025-10-13 07:27:35]  lfn=log.46676269._094123.job.log.tgz.1
[2025-10-13 07:27:35]  mtime=0
[2025-10-13 07:27:35]  protocol_id=None
[2025-10-13 07:27:35]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-13 07:27:35]  replicas=None
[2025-10-13 07:27:35]  scope=mc23_13p6TeV
[2025-10-13 07:27:35]  status=None
[2025-10-13 07:27:35]  status_code=0
[2025-10-13 07:27:35]  storage_token=
[2025-10-13 07:27:35]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6841070318/log.46676269._094123.job.log.tgz.1
[2025-10-13 07:27:35]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0b/ea/log.46676269._094123.job.log.tgz.1
[2025-10-13 07:27:35]  workdir=None
[2025-10-13 07:27:35] ]
[2025-10-13 07:27:35] 2025-10-13 11:26:59,921 | INFO     | transferring file log.46676269._094123.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6841070318/log.46676269._094123.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-13 07:27:35] 2025-10-13 11:26:59,921 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6841070318/log.46676269._094123.job.log.tgz.1 /tmp/boinchome/slots/1/log.46676269._094123.job
[2025-10-13 07:27:35] 2025-10-13 11:26:59,933 | INFO     | adding to output.list: log.46676269._094123.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0b/ea/log.46676269._094123.job.log.tg
[2025-10-13 07:27:35] 2025-10-13 11:26:59,934 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 07:27:35] 2025-10-13 11:26:59,934 | INFO     | summary of transferred files:
[2025-10-13 07:27:35] 2025-10-13 11:26:59,934 | INFO     |  -- lfn=log.46676269._094123.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 07:27:35] 2025-10-13 11:26:59,934 | INFO     | stage-out finished correctly
[2025-10-13 07:27:35] 2025-10-13 11:26:59,989 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 07:27:35] 2025-10-13 11:27:00,070 | INFO     | job 6841070318 has state=finished
[2025-10-13 07:27:35] 2025-10-13 11:27:00,070 | INFO     | preparing for final server update for job 6841070318 in state='finished'
[2025-10-13 07:27:35] 2025-10-13 11:27:00,070 | INFO     | this job has now completed (state=finished)
[2025-10-13 07:27:35] 2025-10-13 11:27:00,070 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 07:27:35] 2025-10-13 11:27:00,070 | INFO     | log transfer has been attempted: DONE
[2025-10-13 07:27:35] 2025-10-13 11:27:00,071 | INFO     | job 6841070318 has finished - writing final server update
[2025-10-13 07:27:35] 2025-10-13 11:27:00,071 | INFO     | total number of processed events: 400 (read)
[2025-10-13 07:27:35] 2025-10-13 11:27:00,071 | INFO     | executing command: lscpu
[2025-10-13 07:27:35] 2025-10-13 11:27:00,107 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 07:27:35] 2025-10-13 11:27:00,904 | INFO     | PID=2256889 has CPU usage=7.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 07:27:35] 2025-10-13 11:27:00,904 | INFO     | .. there are 3 such processes running
[2025-10-13 07:27:35] 2025-10-13 11:27:01,736 | INFO     | monitor loop #319: job 0:6841070318 is in state 'finished'
[2025-10-13 07:27:35] 2025-10-13 11:27:01,736 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 07:27:35] 2025-10-13 11:27:01,904 | INFO     | time since job start (4245s) is within the limit (172800.0s)
[2025-10-13 07:27:35] 2025-10-13 11:27:02,604 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 07:27:35] 2025-10-13 11:27:02,607 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 3040.0465500000005
[2025-10-13 07:27:35] 2025-10-13 11:27:02,623 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6841070318/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 07:27:35] 2025-10-13 11:27:02,623 | INFO     | extracted standard info from prmon json
[2025-10-13 07:27:35] 2025-10-13 11:27:02,624 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 07:27:35] 2025-10-13 11:27:02,624 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 07:27:35] 2025-10-13 11:27:02,624 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 07:27:35] 2025-10-13 11:27:02,624 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 07:27:35] 2025-10-13 11:27:02,625 | INFO     | fitting pss+swap vs Time
[2025-10-13 07:27:35] 2025-10-13 11:27:02,625 | INFO     | sum of square deviations: 77515872.0
[2025-10-13 07:27:35] 2025-10-13 11:27:02,625 | INFO     | sum of deviations: -6620174633.0
[2025-10-13 07:27:35] 2025-10-13 11:27:02,625 | INFO     | mean x: 1760352796.0
[2025-10-13 07:27:35] 2025-10-13 11:27:02,626 | INFO     | mean y: 2354634.888888889
[2025-10-13 07:27:35] 2025-10-13 11:27:02,626 | INFO     | -- intersect: 150343731497.80832
[2025-10-13 07:27:35] 2025-10-13 11:27:02,626 | INFO     | intersect: 150343731497.80832
[2025-10-13 07:27:35] 2025-10-13 11:27:02,626 | INFO     | chi2: 0.06258100489164345
[2025-10-13 07:27:35] 2025-10-13 11:27:02,626 | INFO     | -- intersect: 150343731497.80832
[2025-10-13 07:27:35] 2025-10-13 11:27:02,626 | INFO     | current memory leak: -85.40 B/s (using 63 data points, chi2=0.06)
[2025-10-13 07:27:35] 2025-10-13 11:27:02,626 | INFO     | could have reported an average CPU frequency of 2940 MHz (6 samples)
[2025-10-13 07:27:35] 2025-10-13 11:27:02,626 | INFO     | ..............................
[2025-10-13 07:27:35] 2025-10-13 11:27:02,626 | INFO     | . Timing measurements:
[2025-10-13 07:27:35] 2025-10-13 11:27:02,626 | INFO     | . get job = 0 s
[2025-10-13 07:27:35] 2025-10-13 11:27:02,627 | INFO     | . initial setup = 2 s
[2025-10-13 07:27:35] 2025-10-13 11:27:02,627 | INFO     | . payload setup = 4 s
[2025-10-13 07:27:35] 2025-10-13 11:27:02,627 | INFO     | . stage-in = 0 s
[2025-10-13 07:27:35] 2025-10-13 11:27:02,627 | INFO     | . payload execution = 4220 s
[2025-10-13 07:27:35] 2025-10-13 11:27:02,627 | INFO     | . stage-out = 0 s
[2025-10-13 07:27:35] 2025-10-13 11:27:02,627 | INFO     | . log creation = 0 s
[2025-10-13 07:27:35] 2025-10-13 11:27:02,627 | INFO     | ..............................
[2025-10-13 07:27:35] 2025-10-13 11:27:02,681 | INFO     | 
[2025-10-13 07:27:35] 2025-10-13 11:27:02,682 | INFO     | job summary report
[2025-10-13 07:27:35] 2025-10-13 11:27:02,682 | INFO     | --------------------------------------------------
[2025-10-13 07:27:35] 2025-10-13 11:27:02,682 | INFO     | PanDA job id: 6841070318
[2025-10-13 07:27:35] 2025-10-13 11:27:02,682 | INFO     | task id: 46676269
[2025-10-13 07:27:35] 2025-10-13 11:27:02,682 | INFO     | errors: (none)
[2025-10-13 07:27:35] 2025-10-13 11:27:02,682 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 07:27:35] 2025-10-13 11:27:02,682 | INFO     | pilot state: finished 
[2025-10-13 07:27:35] 2025-10-13 11:27:02,682 | INFO     | transexitcode: 0
[2025-10-13 07:27:35] 2025-10-13 11:27:02,683 | INFO     | exeerrorcode: 0
[2025-10-13 07:27:35] 2025-10-13 11:27:02,683 | INFO     | exeerrordiag: 
[2025-10-13 07:27:35] 2025-10-13 11:27:02,683 | INFO     | exitcode: 0
[2025-10-13 07:27:35] 2025-10-13 11:27:02,683 | INFO     | exitmsg: OK
[2025-10-13 07:27:35] 2025-10-13 11:27:02,683 | INFO     | cpuconsumptiontime: 30491 s
[2025-10-13 07:27:35] 2025-10-13 11:27:02,683 | INFO     | nevents: 400
[2025-10-13 07:27:35] 2025-10-13 11:27:02,683 | INFO     | neventsw: 0
[2025-10-13 07:27:35] 2025-10-13 11:27:02,683 | INFO     | pid: 2263380
[2025-10-13 07:27:35] 2025-10-13 11:27:02,683 | INFO     | pgrp: 2263380
[2025-10-13 07:27:35] 2025-10-13 11:27:02,684 | INFO     | corecount: 8
[2025-10-13 07:27:35] 2025-10-13 11:27:02,684 | INFO     | event service: False
[2025-10-13 07:27:35] 2025-10-13 11:27:02,684 | INFO     | sizes: {0: 2348686, 1: 2348885, 4: 2349147, 11: 2349175, 4228: 2375185, 4229: 2384367, 4231: 2384505}
[2025-10-13 07:27:35] 2025-10-13 11:27:02,684 | INFO     | --------------------------------------------------
[2025-10-13 07:27:35] 2025-10-13 11:27:02,684 | INFO     | 
[2025-10-13 07:27:35] 2025-10-13 11:27:02,684 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-13 07:27:35] 2025-10-13 11:27:02,697 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 07:27:35] 2025-10-13 11:27:02,698 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 07:27:35] 2025-10-13 11:27:02,698 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 07:27:35] 2025-10-13 11:27:02,698 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 07:27:35] 2025-10-13 11:27:02,698 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 07:27:35] 2025-10-13 11:27:02,698 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 07:27:35] 2025-10-13 11:27:02,698 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 07:27:35] 2025-10-13 11:27:02,698 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 07:27:35] 2025-10-13 11:27:02,698 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 07:27:35] 2025-10-13 11:27:02,698 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 07:27:35] 2025-10-13 11:27:02,698 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 07:27:35] 2025-10-13 11:27:02,698 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 07:27:35] 2025-10-13 11:27:02,698 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 07:27:35] 2025-10-13 11:27:02,698 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 07:27:35] 2025-10-13 11:27:02,698 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 07:27:35] 2025-10-13 11:27:02,698 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 07:27:35] 2025-10-13 11:27:02,699 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 07:27:35] 2025-10-13 11:27:02,699 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 07:27:35] 2025-10-13 11:27:02,699 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 07:27:35] 2025-10-13 11:27:02,699 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 07:27:35] 2025-10-13 11:27:02,699 | INFO     | job 6841070318 has completed (purged errors)
[2025-10-13 07:27:35] 2025-10-13 11:27:02,699 | INFO     | overall cleanup function is called
[2025-10-13 07:27:35] 2025-10-13 11:27:03,706 | INFO     | --- collectZombieJob: --- 10, [2263380]
[2025-10-13 07:27:35] 2025-10-13 11:27:03,706 | INFO     | zombie collector waiting for pid 2263380
[2025-10-13 07:27:35] 2025-10-13 11:27:03,706 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 07:27:35] 2025-10-13 11:27:03,706 | INFO     | collected zombie processes
[2025-10-13 07:27:35] 2025-10-13 11:27:03,706 | INFO     | will attempt to kill all subprocesses of pid=2263380
[2025-10-13 07:27:35] 2025-10-13 11:27:03,843 | INFO     | process IDs to be killed: [2263380] (in reverse order)
[2025-10-13 07:27:35] 2025-10-13 11:27:03,884 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 07:27:35] 2025-10-13 11:27:03,884 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 07:27:35] 2025-10-13 11:27:03,888 | INFO     | did not find any defunct processes belonging to 2263380
[2025-10-13 07:27:35] 2025-10-13 11:27:03,892 | INFO     | did not find any defunct processes belonging to 2263380
[2025-10-13 07:27:35] 2025-10-13 11:27:03,892 | INFO     | ready for new job
[2025-10-13 07:27:35] 2025-10-13 11:27:03,892 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 07:27:35] 2025-10-13 11:27:03,893 | INFO     | ***************************************
[2025-10-13 07:27:35] 2025-10-13 11:27:03,893 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 07:27:35] 2025-10-13 11:27:03,893 | INFO     | ***************************************
[2025-10-13 07:27:35] 2025-10-13 11:27:03,893 | INFO     | 
[2025-10-13 07:27:35] 2025-10-13 11:27:03,907 | INFO     | architecture information:
[2025-10-13 07:27:35] 2025-10-13 11:27:03,907 | INFO     | executing command: cat /etc/os-release
[2025-10-13 07:27:35] 2025-10-13 11:27:03,916 | INFO     | cat /etc/os-release:
[2025-10-13 07:27:35] NAME="CentOS Linux"
[2025-10-13 07:27:35] VERSION="7 (Core)"
[2025-10-13 07:27:35] ID="centos"
[2025-10-13 07:27:35] ID_LIKE="rhel fedora"
[2025-10-13 07:27:35] VERSION_ID="7"
[2025-10-13 07:27:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 07:27:35] ANSI_COLOR="0;31"
[2025-10-13 07:27:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 07:27:35] HOME_URL="https://www.centos.org/"
[2025-10-13 07:27:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 07:27:35] 
[2025-10-13 07:27:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 07:27:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 07:27:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 07:27:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 07:27:35] 
[2025-10-13 07:27:35] 2025-10-13 11:27:03,916 | INFO     | ***************************************
[2025-10-13 07:27:35] 2025-10-13 11:27:04,418 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-13 07:27:35] 2025-10-13 11:27:04,428 | INFO     | sufficient remaining disk space (74919706624 B)
[2025-10-13 07:27:35] 2025-10-13 11:27:04,428 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 07:27:35] 2025-10-13 11:27:04,428 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 07:27:35] 2025-10-13 11:27:04,428 | INFO     | update_server=False
[2025-10-13 07:27:35] 2025-10-13 11:27:04,428 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 07:27:35] 2025-10-13 11:27:04,428 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:27:35] 2025-10-13 11:27:04,771 | INFO     | all data control threads have been joined
[2025-10-13 07:27:35] 2025-10-13 11:27:05,245 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:27:35] 2025-10-13 11:27:05,245 | INFO     | aborting loop
[2025-10-13 07:27:35] 2025-10-13 11:27:05,358 | INFO     | all job control threads have been joined
[2025-10-13 07:27:35] 2025-10-13 11:27:05,433 | INFO     | [job] retrieve thread has finished
[2025-10-13 07:27:35] 2025-10-13 11:27:05,434 | INFO     | [job] queue monitor thread has finished
[2025-10-13 07:27:35] 2025-10-13 11:27:05,490 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 07:27:35] 2025-10-13 11:27:05,497 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 07:27:35] 2025-10-13 11:27:05,734 | INFO     | all payload control threads have been joined
[2025-10-13 07:27:35] 2025-10-13 11:27:05,777 | INFO     | [data] control thread has finished
[2025-10-13 07:27:35] 2025-10-13 11:27:05,920 | INFO     | [payload] failed_post thread has finished
[2025-10-13 07:27:35] 2025-10-13 11:27:06,074 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 07:27:35] 2025-10-13 11:27:06,162 | INFO     | [data] copytool_in thread has finished
[2025-10-13 07:27:35] 2025-10-13 11:27:06,250 | INFO     | [job] job monitor thread has finished
[2025-10-13 07:27:35] 2025-10-13 11:27:06,360 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 07:27:35] 2025-10-13 11:27:06,364 | INFO     | [job] control thread has finished
[2025-10-13 07:27:35] 2025-10-13 11:27:06,496 | INFO     | [job] validate thread has finished
[2025-10-13 07:27:35] 2025-10-13 11:27:06,739 | INFO     | [payload] control thread has finished
[2025-10-13 07:27:35] 2025-10-13 11:27:06,752 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 07:27:35] 2025-10-13 11:27:06,853 | INFO     | [payload] validate_post thread has finished
[2025-10-13 07:27:35] 2025-10-13 11:27:07,502 | INFO     | [data] copytool_out thread has finished
[2025-10-13 07:27:35] 2025-10-13 11:27:10,080 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 07:27:35] 2025-10-13 11:27:15,142 | INFO     | job.realtimelogging is not enabled
[2025-10-13 07:27:35] 2025-10-13 11:27:16,147 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 07:27:35] 2025-10-13 11:27:21,105 | INFO     | [monitor] cgroup control has ended
[2025-10-13 07:27:35] 2025-10-13 11:27:22,176 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140442948044608)>', '<ExcThread(monitor, started 140442444216064)>']
[2025-10-13 07:27:35] 2025-10-13 11:27:27,190 | INFO     | all workflow threads have been joined
[2025-10-13 07:27:35] 2025-10-13 11:27:27,190 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 07:27:35] 2025-10-13 11:27:27,190 | INFO     | traces error code: 0
[2025-10-13 07:27:35] 2025-10-13 11:27:27,191 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 07:27:35] 2025-10-13 11:27:35,151 | INFO     | PID=2256889 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 07:27:35] 2025-10-13 11:27:35,151 | INFO     | .. there are 3 such processes running
[2025-10-13 07:27:35] 2025-10-13 11:27:35,152 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 07:27:35] 2025-10-13 11:27:35,152 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 07:27:35] 2025-10-13 11:27:35,152 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 07:27:35] 2025-10-13 11:27:35,152 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 07:27:35] 2025-10-13 11:27:35,152 | INFO     | [monitor] control thread has ended
[2025-10-13 07:27:35] 2025-10-13 11:27:35,250 [wrapper] ==== pilot stdout END ====
[2025-10-13 07:27:35] 2025-10-13 11:27:35,251 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 07:27:35] 2025-10-13 11:27:35,253 [wrapper] pilotpid: 2256889
[2025-10-13 07:27:35] 2025-10-13 11:27:35,255 [wrapper] Pilot exit status: 0
[2025-10-13 07:27:35] 2025-10-13 11:27:35,261 [wrapper] pandaids: 6841070318
[2025-10-13 07:27:35] 2025-10-13 11:27:35,289 [wrapper] cleanup supervisor_pilot 2388070 2256890
[2025-10-13 07:27:35] 2025-10-13 11:27:35,292 [wrapper] Test setup, not cleaning
[2025-10-13 07:27:35] 2025-10-13 11:27:35,294 [wrapper] apfmon messages muted
[2025-10-13 07:27:35] 2025-10-13 11:27:35,296 [wrapper] ==== wrapper stdout END ====
[2025-10-13 07:27:35] 2025-10-13 11:27:35,297 [wrapper] ==== wrapper stderr END ====
[2025-10-13 07:27:35]  *** Error codes and diagnostics ***
[2025-10-13 07:27:35]     "exeErrorCode": 0,
[2025-10-13 07:27:35]     "exeErrorDiag": "",
[2025-10-13 07:27:35]     "pilotErrorCode": 0,
[2025-10-13 07:27:35]     "pilotErrorDiag": "",
[2025-10-13 07:27:35]  *** Listing of results directory ***
[2025-10-13 07:27:35] total 413708
[2025-10-13 07:27:35] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 21:18 pilot3.tar.gz
[2025-10-13 07:27:35] -rwx------. 1 boincer umatlas     36292 Oct 12 21:29 runpilot2-wrapper.sh
[2025-10-13 07:27:35] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 21:29 queuedata.json
[2025-10-13 07:27:35] -rw-r--r--. 1 boincer umatlas       100 Oct 13 06:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 07:27:35] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 06:16 run_atlas
[2025-10-13 07:27:35] -rw-r--r--. 1 boincer umatlas       105 Oct 13 06:16 job.xml
[2025-10-13 07:27:35] -rw-r--r--. 2 boincer umatlas 224865041 Oct 13 06:16 EVNT.46676267._004359.pool.root.1
[2025-10-13 07:27:35] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 06:16 start_atlas.sh
[2025-10-13 07:27:35] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 06:16 shared
[2025-10-13 07:27:35] -rw-r--r--. 2 boincer umatlas    569677 Oct 13 06:16 input.tar.gz
[2025-10-13 07:27:35] -rw-r--r--. 1 boincer umatlas         0 Oct 13 06:16 boinc_lockfile
[2025-10-13 07:27:35] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 06:16 pandaJob.out
[2025-10-13 07:27:35] -rw-------. 1 boincer umatlas    972497 Oct 13 06:16 agis_schedconf.cvmfs.json
[2025-10-13 07:27:35] -rw-------. 1 boincer umatlas   1560580 Oct 13 06:16 agis_ddmendpoints.agis.ALL.json
[2025-10-13 07:27:35] drwx------. 5 boincer umatlas      4096 Oct 13 06:16 pilot3
[2025-10-13 07:27:35] -rw-r--r--. 1 boincer umatlas      6661 Oct 13 07:19 init_data.xml
[2025-10-13 07:27:35] -rw-------. 1 boincer umatlas 192926799 Oct 13 07:26 HITS.46676269._094123.pool.root.1
[2025-10-13 07:27:35] -rw-r--r--. 1 boincer umatlas       529 Oct 13 07:26 boinc_task_state.xml
[2025-10-13 07:27:35] -rw-------. 1 boincer umatlas      1032 Oct 13 07:26 memory_monitor_summary.json
[2025-10-13 07:27:35] -rw-------. 1 boincer umatlas    333873 Oct 13 07:26 log.46676269._094123.job.log.tgz.1
[2025-10-13 07:27:35] -rw-------. 1 boincer umatlas      7812 Oct 13 07:27 heartbeat.json
[2025-10-13 07:27:35] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 07:27 boinc_mmap_file
[2025-10-13 07:27:35] -rw-r--r--. 1 boincer umatlas        27 Oct 13 07:27 wrapper_checkpoint.txt
[2025-10-13 07:27:35] -rw-------. 1 boincer umatlas       822 Oct 13 07:27 pilotlog.txt
[2025-10-13 07:27:35] -rw-------. 1 boincer umatlas        95 Oct 13 07:27 pilot_heartbeat.json
[2025-10-13 07:27:35] -rw-------. 1 boincer umatlas    634883 Oct 13 07:27 log.46676269._094123.job.log.1
[2025-10-13 07:27:35] -rw-------. 1 boincer umatlas       357 Oct 13 07:27 output.list
[2025-10-13 07:27:35] -rw-r--r--. 1 boincer umatlas       620 Oct 13 07:27 runtime_log
[2025-10-13 07:27:35] -rw-------. 1 boincer umatlas    993280 Oct 13 07:27 result.tar.gz
[2025-10-13 07:27:35] -rw-r--r--. 1 boincer umatlas      8693 Oct 13 07:27 runtime_log.err
[2025-10-13 07:27:35] -rw-------. 1 boincer umatlas       649 Oct 13 07:27 LabNDmZYMS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmpSVMDmU7oKEo.diag
[2025-10-13 07:27:35] -rw-r--r--. 1 boincer umatlas     21666 Oct 13 07:27 stderr.txt
[2025-10-13 07:27:35] HITS file was successfully produced:
[2025-10-13 07:27:35] -rw-------. 1 boincer umatlas 192926799 Oct 13 07:26 shared/HITS.pool.root.1
[2025-10-13 07:27:35]  *** Contents of shared directory: ***
[2025-10-13 07:27:35] total 409560
[2025-10-13 07:27:35] -rw-r--r--. 2 boincer umatlas 224865041 Oct 13 06:16 ATLAS.root_0
[2025-10-13 07:27:35] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 06:16 start_atlas.sh
[2025-10-13 07:27:35] -rw-r--r--. 2 boincer umatlas    569677 Oct 13 06:16 input.tar.gz
[2025-10-13 07:27:35] -rw-------. 1 boincer umatlas 192926799 Oct 13 07:26 HITS.pool.root.1
[2025-10-13 07:27:35] -rw-------. 1 boincer umatlas    993280 Oct 13 07:27 result.tar.gz
07:27:36 (2252503): run_atlas exited; CPU time 30588.103431
07:27:36 (2252503): called boinc_finish(0)

</stderr_txt>
]]>

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