Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:23:30 (16636): wrapper (7.7.26015): starting
05:23:30 (16636): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 05:23:30] Arguments: --nthreads 8
[2025-10-13 05:23:30] Threads: 8
[2025-10-13 05:23:30] Checking for CVMFS
[2025-10-13 05:23:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 05:23:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 05:23:30] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 05:23:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 05:23:30] 2.11.2.0 6956 54112 133580 151656 2 56 10402051 18432000 1833 130560 0 49843372 99.974 2428769 39750 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 05:23:30] CVMFS is ok
[2025-10-13 05:23:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 05:23:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 05:23:30] Further information can be found at the LHC@home message board.
[2025-10-13 05:23:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 05:23:30] Checking for apptainer binary...
[2025-10-13 05:23:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 05:23:30] Running /usr/bin/apptainer --version
[2025-10-13 05:23:30] apptainer version 1.3.2-1.el7
[2025-10-13 05:23:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 05:23:31] c-206-16.aglt2.org
[2025-10-13 05:23:31] apptainer works
[2025-10-13 05:23:31] Set ATHENA_PROC_NUMBER=8
[2025-10-13 05:23:31] Set ATHENA_CORE_NUMBER=8
[2025-10-13 05:23:31] Starting ATLAS job with PandaID=6841844238
[2025-10-13 05:23:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 08:09:03]  *** The last 200 lines of the pilot log: ***
[2025-10-13 08:09:03] 2025-10-13 12:07:59,432 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 08:09:03] 2025-10-13 12:07:59,434 | INFO     | fitting pss+swap vs Time
[2025-10-13 08:09:03] 2025-10-13 12:07:59,434 | INFO     | sum of square deviations: 1318277740.5
[2025-10-13 08:09:03] 2025-10-13 12:07:59,435 | INFO     | sum of deviations: -13123365357.0
[2025-10-13 08:09:03] 2025-10-13 12:07:59,435 | INFO     | mean x: 1760352357.5
[2025-10-13 08:09:03] 2025-10-13 12:07:59,435 | INFO     | mean y: 2496504.6913580247
[2025-10-13 08:09:03] 2025-10-13 12:07:59,435 | INFO     | -- intersect: 17526684644.109295
[2025-10-13 08:09:03] 2025-10-13 12:07:59,436 | INFO     | intersect: 17526684644.109295
[2025-10-13 08:09:03] 2025-10-13 12:07:59,436 | INFO     | chi2: 2.405012530942403
[2025-10-13 08:09:03] 2025-10-13 12:07:59,436 | INFO     | sum of square deviations: 1199940638.0
[2025-10-13 08:09:03] 2025-10-13 12:07:59,437 | INFO     | sum of deviations: -1684446008.9999967
[2025-10-13 08:09:03] 2025-10-13 12:07:59,437 | INFO     | mean x: 1760352205.0
[2025-10-13 08:09:03] 2025-10-13 12:07:59,437 | INFO     | mean y: 2510893.668789809
[2025-10-13 08:09:03] 2025-10-13 12:07:59,437 | INFO     | -- intersect: 2473648341.84195
[2025-10-13 08:09:03] 2025-10-13 12:07:59,437 | INFO     | intersect: 2473648341.84195
[2025-10-13 08:09:03] 2025-10-13 12:07:59,437 | INFO     | chi2: 1.5952472153468575
[2025-10-13 08:09:03] 2025-10-13 12:07:59,438 | INFO     | current chi2=1.5952472153468575 (change=33.66990005986536 %)
[2025-10-13 08:09:03] 2025-10-13 12:07:59,438 | INFO     | sum of square deviations: 1088905998.0
[2025-10-13 08:09:03] 2025-10-13 12:07:59,438 | INFO     | sum of deviations: -1388989367.5000029
[2025-10-13 08:09:03] 2025-10-13 12:07:59,439 | INFO     | mean x: 1760352052.5
[2025-10-13 08:09:03] 2025-10-13 12:07:59,439 | INFO     | mean y: 2511299.5986842103
[2025-10-13 08:09:03] 2025-10-13 12:07:59,439 | INFO     | -- intersect: 2247985462.171262
[2025-10-13 08:09:03] 2025-10-13 12:07:59,439 | INFO     | intersect: 2247985462.171262
[2025-10-13 08:09:03] 2025-10-13 12:07:59,439 | INFO     | chi2: 1.5956666665677983
[2025-10-13 08:09:03] 2025-10-13 12:07:59,439 | INFO     | current chi2=1.5956666665677983 (change=-0.02629380680972251 %)
[2025-10-13 08:09:03] 2025-10-13 12:07:59,439 | INFO     | right removable region: 151
[2025-10-13 08:09:03] 2025-10-13 12:07:59,440 | INFO     | sum of square deviations: 1199940638.0
[2025-10-13 08:09:03] 2025-10-13 12:07:59,440 | INFO     | sum of deviations: -36085995761.0
[2025-10-13 08:09:03] 2025-10-13 12:07:59,440 | INFO     | mean x: 1760352510.0
[2025-10-13 08:09:03] 2025-10-13 12:07:59,441 | INFO     | mean y: 2525659.4904458597
[2025-10-13 08:09:03] 2025-10-13 12:07:59,441 | INFO     | -- intersect: 52941872158.83429
[2025-10-13 08:09:03] 2025-10-13 12:07:59,441 | INFO     | intersect: 52941872158.83429
[2025-10-13 08:09:03] 2025-10-13 12:07:59,441 | INFO     | chi2: 1.0416267988398198
[2025-10-13 08:09:03] 2025-10-13 12:07:59,441 | INFO     | current chi2=1.0416267988398198 (change=56.68934005796391 %)
[2025-10-13 08:09:03] 2025-10-13 12:07:59,441 | INFO     | sum of square deviations: 1088905998.0
[2025-10-13 08:09:03] 2025-10-13 12:07:59,442 | INFO     | sum of deviations: -38907943174.00001
[2025-10-13 08:09:03] 2025-10-13 12:07:59,442 | INFO     | mean x: 1760352662.5
[2025-10-13 08:09:03] 2025-10-13 12:07:59,442 | INFO     | mean y: 2529535.302631579
[2025-10-13 08:09:03] 2025-10-13 12:07:59,442 | INFO     | -- intersect: 62902083293.43118
[2025-10-13 08:09:03] 2025-10-13 12:07:59,442 | INFO     | intersect: 62902083293.43118
[2025-10-13 08:09:03] 2025-10-13 12:07:59,443 | INFO     | chi2: 0.9996870020984644
[2025-10-13 08:09:03] 2025-10-13 12:07:59,443 | INFO     | current chi2=0.9996870020984644 (change=4.026374589062858 %)
[2025-10-13 08:09:03] 2025-10-13 12:07:59,443 | INFO     | left removable region: 20
[2025-10-13 08:09:03] 2025-10-13 12:07:59,443 | INFO     | sum of square deviations: 697054930.0
[2025-10-13 08:09:03] 2025-10-13 12:07:59,444 | INFO     | sum of deviations: -18563177912.000004
[2025-10-13 08:09:03] 2025-10-13 12:07:59,444 | INFO     | mean x: 1760352632.0
[2025-10-13 08:09:03] 2025-10-13 12:07:59,444 | INFO     | mean y: 2534584.816793893
[2025-10-13 08:09:03] 2025-10-13 12:07:59,444 | INFO     | -- intersect: 46882253369.20796
[2025-10-13 08:09:03] 2025-10-13 12:07:59,444 | INFO     | intersect: 46882253369.20796
[2025-10-13 08:09:03] 2025-10-13 12:07:59,444 | INFO     | chi2: 0.1436080533531177
[2025-10-13 08:09:03] 2025-10-13 12:07:59,444 | INFO     | -- intersect: 46882253369.20796
[2025-10-13 08:09:03] 2025-10-13 12:07:59,445 | INFO     | current memory leak: -26.63 B/s (using 131 data points, chi2=0.14)
[2025-10-13 08:09:03] 2025-10-13 12:07:59,445 | INFO     | could have reported an average CPU frequency of 2490 MHz (9 samples)
[2025-10-13 08:09:03] 2025-10-13 12:07:59,445 | INFO     | ..............................
[2025-10-13 08:09:03] 2025-10-13 12:07:59,445 | INFO     | . Timing measurements:
[2025-10-13 08:09:03] 2025-10-13 12:07:59,445 | INFO     | . get job = 0 s
[2025-10-13 08:09:03] 2025-10-13 12:07:59,445 | INFO     | . initial setup = 2 s
[2025-10-13 08:09:03] 2025-10-13 12:07:59,445 | INFO     | . payload setup = 4 s
[2025-10-13 08:09:03] 2025-10-13 12:07:59,445 | INFO     | . stage-in = 0 s
[2025-10-13 08:09:03] 2025-10-13 12:07:59,446 | INFO     | . payload execution = 9827 s
[2025-10-13 08:09:03] 2025-10-13 12:07:59,446 | INFO     | . stage-out = 0 s
[2025-10-13 08:09:03] 2025-10-13 12:07:59,446 | INFO     | . log creation = 0 s
[2025-10-13 08:09:03] 2025-10-13 12:07:59,446 | INFO     | ..............................
[2025-10-13 08:09:03] 2025-10-13 12:07:59,520 | INFO     | 
[2025-10-13 08:09:03] 2025-10-13 12:07:59,520 | INFO     | job summary report
[2025-10-13 08:09:03] 2025-10-13 12:07:59,520 | INFO     | --------------------------------------------------
[2025-10-13 08:09:03] 2025-10-13 12:07:59,520 | INFO     | PanDA job id: 6841844238
[2025-10-13 08:09:03] 2025-10-13 12:07:59,520 | INFO     | task id: 46676269
[2025-10-13 08:09:03] 2025-10-13 12:07:59,520 | INFO     | errors: (none)
[2025-10-13 08:09:03] 2025-10-13 12:07:59,521 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 08:09:03] 2025-10-13 12:07:59,521 | INFO     | pilot state: finished 
[2025-10-13 08:09:03] 2025-10-13 12:07:59,521 | INFO     | transexitcode: 0
[2025-10-13 08:09:03] 2025-10-13 12:07:59,521 | INFO     | exeerrorcode: 0
[2025-10-13 08:09:03] 2025-10-13 12:07:59,521 | INFO     | exeerrordiag: 
[2025-10-13 08:09:03] 2025-10-13 12:07:59,521 | INFO     | exitcode: 0
[2025-10-13 08:09:03] 2025-10-13 12:07:59,521 | INFO     | exitmsg: OK
[2025-10-13 08:09:03] 2025-10-13 12:07:59,521 | INFO     | cpuconsumptiontime: 73192 s
[2025-10-13 08:09:03] 2025-10-13 12:07:59,521 | INFO     | nevents: 400
[2025-10-13 08:09:03] 2025-10-13 12:07:59,521 | INFO     | neventsw: 0
[2025-10-13 08:09:03] 2025-10-13 12:07:59,521 | INFO     | pid: 26863
[2025-10-13 08:09:03] 2025-10-13 12:07:59,522 | INFO     | pgrp: 26863
[2025-10-13 08:09:03] 2025-10-13 12:07:59,522 | INFO     | corecount: 8
[2025-10-13 08:09:03] 2025-10-13 12:07:59,523 | INFO     | event service: False
[2025-10-13 08:09:03] 2025-10-13 12:07:59,523 | INFO     | sizes: {0: 2348801, 1: 2348801, 4: 2349091, 12: 2349119, 9835: 2377634, 9836: 2386632, 9837: 2386816, 9842: 2387074}
[2025-10-13 08:09:03] 2025-10-13 12:07:59,523 | INFO     | --------------------------------------------------
[2025-10-13 08:09:03] 2025-10-13 12:07:59,523 | INFO     | 
[2025-10-13 08:09:03] 2025-10-13 12:07:59,524 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 08:09:03] 2025-10-13 12:07:59,538 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 08:09:03] 2025-10-13 12:07:59,538 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 08:09:03] 2025-10-13 12:07:59,538 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 08:09:03] 2025-10-13 12:07:59,539 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 08:09:03] 2025-10-13 12:07:59,539 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 08:09:03] 2025-10-13 12:07:59,539 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 08:09:03] 2025-10-13 12:07:59,539 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 08:09:03] 2025-10-13 12:07:59,539 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 08:09:03] 2025-10-13 12:07:59,539 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 08:09:03] 2025-10-13 12:07:59,539 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 08:09:03] 2025-10-13 12:07:59,539 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 08:09:03] 2025-10-13 12:07:59,539 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 08:09:03] 2025-10-13 12:07:59,540 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 08:09:03] 2025-10-13 12:07:59,540 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 08:09:03] 2025-10-13 12:07:59,540 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 08:09:03] 2025-10-13 12:07:59,540 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 08:09:03] 2025-10-13 12:07:59,540 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 08:09:03] 2025-10-13 12:07:59,540 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 08:09:03] 2025-10-13 12:07:59,540 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 08:09:03] 2025-10-13 12:07:59,540 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 08:09:03] 2025-10-13 12:07:59,540 | INFO     | job 6841844238 has completed (purged errors)
[2025-10-13 08:09:03] 2025-10-13 12:07:59,541 | INFO     | overall cleanup function is called
[2025-10-13 08:09:03] 2025-10-13 12:08:00,544 | INFO     | --- collectZombieJob: --- 10, [26863]
[2025-10-13 08:09:03] 2025-10-13 12:08:00,544 | INFO     | zombie collector waiting for pid 26863
[2025-10-13 08:09:03] 2025-10-13 12:08:00,544 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 08:09:03] 2025-10-13 12:08:00,544 | INFO     | collected zombie processes
[2025-10-13 08:09:03] 2025-10-13 12:08:00,544 | INFO     | will attempt to kill all subprocesses of pid=26863
[2025-10-13 08:09:03] 2025-10-13 12:08:00,644 | INFO     | process IDs to be killed: [26863] (in reverse order)
[2025-10-13 08:09:03] 2025-10-13 12:08:00,681 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 08:09:03] 2025-10-13 12:08:00,681 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 08:09:03] 2025-10-13 12:08:00,684 | INFO     | did not find any defunct processes belonging to 26863
[2025-10-13 08:09:03] 2025-10-13 12:08:00,686 | INFO     | did not find any defunct processes belonging to 26863
[2025-10-13 08:09:03] 2025-10-13 12:08:00,686 | INFO     | ready for new job
[2025-10-13 08:09:03] 2025-10-13 12:08:00,687 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 08:09:03] 2025-10-13 12:08:00,688 | INFO     | ***************************************
[2025-10-13 08:09:03] 2025-10-13 12:08:00,688 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 08:09:03] 2025-10-13 12:08:00,688 | INFO     | ***************************************
[2025-10-13 08:09:03] 2025-10-13 12:08:00,688 | INFO     | 
[2025-10-13 08:09:03] 2025-10-13 12:08:00,689 | INFO     | architecture information:
[2025-10-13 08:09:03] 2025-10-13 12:08:00,690 | INFO     | executing command: cat /etc/os-release
[2025-10-13 08:09:03] 2025-10-13 12:08:00,701 | INFO     | cat /etc/os-release:
[2025-10-13 08:09:03] NAME="CentOS Linux"
[2025-10-13 08:09:03] VERSION="7 (Core)"
[2025-10-13 08:09:03] ID="centos"
[2025-10-13 08:09:03] ID_LIKE="rhel fedora"
[2025-10-13 08:09:03] VERSION_ID="7"
[2025-10-13 08:09:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 08:09:03] ANSI_COLOR="0;31"
[2025-10-13 08:09:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 08:09:03] HOME_URL="https://www.centos.org/"
[2025-10-13 08:09:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 08:09:03] 
[2025-10-13 08:09:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 08:09:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 08:09:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 08:09:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 08:09:03] 
[2025-10-13 08:09:03] 2025-10-13 12:08:00,701 | INFO     | ***************************************
[2025-10-13 08:09:03] 2025-10-13 12:08:01,204 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 08:09:03] 2025-10-13 12:08:01,216 | INFO     | sufficient remaining disk space (28995223552 B)
[2025-10-13 08:09:03] 2025-10-13 12:08:01,216 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 08:09:03] 2025-10-13 12:08:01,216 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 08:09:03] 2025-10-13 12:08:01,216 | INFO     | update_server=False
[2025-10-13 08:09:03] 2025-10-13 12:08:01,216 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 08:09:03] 2025-10-13 12:08:01,216 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 08:09:03] 2025-10-13 12:08:01,217 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 08:09:03] 2025-10-13 12:08:01,471 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 08:09:03] 2025-10-13 12:08:01,471 | INFO     | aborting loop
[2025-10-13 08:09:03] 2025-10-13 12:08:01,741 | INFO     | all job control threads have been joined
[2025-10-13 08:09:03] 2025-10-13 12:08:01,793 | INFO     | all payload control threads have been joined
[2025-10-13 08:09:03] 2025-10-13 12:08:01,867 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 08:09:03] 2025-10-13 12:08:02,222 | INFO     | [job] retrieve thread has finished
[2025-10-13 08:09:03] 2025-10-13 12:08:02,222 | INFO     | [job] queue monitor thread has finished
[2025-10-13 08:09:03] 2025-10-13 12:08:02,294 | INFO     | all data control threads have been joined
[2025-10-13 08:09:03] 2025-10-13 12:08:02,477 | INFO     | [job] job monitor thread has finished
[2025-10-13 08:09:03] 2025-10-13 12:08:02,650 | INFO     | [job] validate thread has finished
[2025-10-13 08:09:03] 2025-10-13 12:08:02,745 | INFO     | [job] control thread has finished
[2025-10-13 08:09:03] 2025-10-13 12:08:02,795 | INFO     | [payload] control thread has finished
[2025-10-13 08:09:03] 2025-10-13 12:08:02,962 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 08:09:03] 2025-10-13 12:08:03,117 | INFO     | [payload] failed_post thread has finished
[2025-10-13 08:09:03] 2025-10-13 12:08:03,299 | INFO     | [data] control thread has finished
[2025-10-13 08:09:03] 2025-10-13 12:08:03,480 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 08:09:03] 2025-10-13 12:08:03,547 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 08:09:03] 2025-10-13 12:08:03,574 | INFO     | [data] copytool_in thread has finished
[2025-10-13 08:09:03] 2025-10-13 12:08:03,693 | INFO     | [payload] validate_post thread has finished
[2025-10-13 08:09:03] 2025-10-13 12:08:03,872 | INFO     | [data] copytool_out thread has finished
[2025-10-13 08:09:03] 2025-10-13 12:08:05,221 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 08:09:03] 2025-10-13 12:08:11,852 | INFO     | job.realtimelogging is not enabled
[2025-10-13 08:09:03] 2025-10-13 12:08:12,855 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 08:09:03] 2025-10-13 12:08:32,403 | INFO     | PID=20331 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 08:09:03] 2025-10-13 12:08:32,404 | INFO     | .. there are 2 such processes running
[2025-10-13 08:09:03] 2025-10-13 12:08:32,404 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 08:09:03] 2025-10-13 12:08:32,404 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 08:09:03] 2025-10-13 12:08:32,404 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 08:09:03] 2025-10-13 12:08:39,707 [wrapper] supervise_pilot (15 min periods counter: 12)
[2025-10-13 08:09:03] 2025-10-13 12:08:57,202 | INFO     | [monitor] cgroup control has ended
[2025-10-13 08:09:03] 2025-10-13 12:08:58,022 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140495660836672)>', '<ExcThread(monitor, started 140495082743552)>']
[2025-10-13 08:09:03] 2025-10-13 12:08:58,528 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 08:09:03] 2025-10-13 12:08:58,528 | INFO     | [monitor] control thread has ended
[2025-10-13 08:09:03] 2025-10-13 12:09:03,047 | INFO     | all workflow threads have been joined
[2025-10-13 08:09:03] 2025-10-13 12:09:03,048 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 08:09:03] 2025-10-13 12:09:03,048 | INFO     | traces error code: 0
[2025-10-13 08:09:03] 2025-10-13 12:09:03,048 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 08:09:03] 2025-10-13 12:09:03,137 [wrapper] ==== pilot stdout END ====
[2025-10-13 08:09:03] 2025-10-13 12:09:03,140 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 08:09:03] 2025-10-13 12:09:03,143 [wrapper] pilotpid: 20331
[2025-10-13 08:09:03] 2025-10-13 12:09:03,145 [wrapper] Pilot exit status: 0
[2025-10-13 08:09:03] 2025-10-13 12:09:03,151 [wrapper] pandaids: 6841844238
[2025-10-13 08:09:03] 2025-10-13 12:09:03,176 [wrapper] cleanup supervisor_pilot  1665 20332
[2025-10-13 08:09:03] 2025-10-13 12:09:03,178 [wrapper] Test setup, not cleaning
[2025-10-13 08:09:03] 2025-10-13 12:09:03,180 [wrapper] apfmon messages muted
[2025-10-13 08:09:03] 2025-10-13 12:09:03,182 [wrapper] ==== wrapper stdout END ====
[2025-10-13 08:09:03] 2025-10-13 12:09:03,184 [wrapper] ==== wrapper stderr END ====
[2025-10-13 08:09:03]  *** Error codes and diagnostics ***
[2025-10-13 08:09:03]     "exeErrorCode": 0,
[2025-10-13 08:09:03]     "exeErrorDiag": "",
[2025-10-13 08:09:03]     "pilotErrorCode": 0,
[2025-10-13 08:09:03]     "pilotErrorDiag": "",
[2025-10-13 08:09:03]  *** Listing of results directory ***
[2025-10-13 08:09:03] total 407772
[2025-10-13 08:09:03] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 23:02 pilot3.tar.gz
[2025-10-13 08:09:03] -rwx------ 1 boincer umatlas     36292 Oct 12 23:10 runpilot2-wrapper.sh
[2025-10-13 08:09:03] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 23:10 queuedata.json
[2025-10-13 08:09:03] -rw-r--r-- 1 boincer umatlas       100 Oct 13 05:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 08:09:03] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 05:23 run_atlas
[2025-10-13 08:09:03] -rw-r--r-- 1 boincer umatlas       105 Oct 13 05:23 job.xml
[2025-10-13 08:09:03] -rw-r--r-- 2 boincer umatlas 219804331 Oct 13 05:23 EVNT.46676267._002592.pool.root.1
[2025-10-13 08:09:03] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 05:23 start_atlas.sh
[2025-10-13 08:09:03] drwxrwx--x 2 boincer umatlas      4096 Oct 13 05:23 shared
[2025-10-13 08:09:03] -rw-r--r-- 2 boincer umatlas    569680 Oct 13 05:23 input.tar.gz
[2025-10-13 08:09:03] -rw-r--r-- 1 boincer umatlas         0 Oct 13 05:23 boinc_lockfile
[2025-10-13 08:09:03] -rw-r--r-- 1 boincer umatlas      2547 Oct 13 05:23 pandaJob.out
[2025-10-13 08:09:03] -rw------- 1 boincer umatlas    972849 Oct 13 05:23 agis_schedconf.cvmfs.json
[2025-10-13 08:09:03] -rw------- 1 boincer umatlas   1560580 Oct 13 05:23 agis_ddmendpoints.agis.ALL.json
[2025-10-13 08:09:03] drwx------ 5 boincer umatlas      4096 Oct 13 05:23 pilot3
[2025-10-13 08:09:03] -rw-r--r-- 1 boincer umatlas      5949 Oct 13 08:04 init_data.xml
[2025-10-13 08:09:03] -rw------- 1 boincer umatlas 190289533 Oct 13 08:07 HITS.46676269._095536.pool.root.1
[2025-10-13 08:09:03] -rw-r--r-- 1 boincer umatlas       529 Oct 13 08:07 boinc_task_state.xml
[2025-10-13 08:09:03] -rw------- 1 boincer umatlas      1067 Oct 13 08:07 memory_monitor_summary.json
[2025-10-13 08:09:03] -rw------- 1 boincer umatlas        95 Oct 13 08:07 pilot_heartbeat.json
[2025-10-13 08:09:03] -rw------- 1 boincer umatlas    387620 Oct 13 08:07 log.46676269._095536.job.log.tgz.1
[2025-10-13 08:09:03] -rw------- 1 boincer umatlas      7857 Oct 13 08:07 heartbeat.json
[2025-10-13 08:09:03] -rw-r--r-- 1 boincer umatlas        27 Oct 13 08:08 wrapper_checkpoint.txt
[2025-10-13 08:09:03] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 08:08 boinc_mmap_file
[2025-10-13 08:09:03] -rw------- 1 boincer umatlas      4893 Oct 13 08:09 pilotlog.txt
[2025-10-13 08:09:03] -rw------- 1 boincer umatlas   1395891 Oct 13 08:09 log.46676269._095536.job.log.1
[2025-10-13 08:09:03] -rw------- 1 boincer umatlas       357 Oct 13 08:09 output.list
[2025-10-13 08:09:03] -rw-r--r-- 1 boincer umatlas       620 Oct 13 08:09 runtime_log
[2025-10-13 08:09:03] -rw------- 1 boincer umatlas   1802240 Oct 13 08:09 result.tar.gz
[2025-10-13 08:09:03] -rw------- 1 boincer umatlas       658 Oct 13 08:09 spnNDm37NS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm1amNDmUDvu2n.diag
[2025-10-13 08:09:03] -rw-r--r-- 1 boincer umatlas      8703 Oct 13 08:09 runtime_log.err
[2025-10-13 08:09:03] -rw-r--r-- 1 boincer umatlas     20858 Oct 13 08:09 stderr.txt
[2025-10-13 08:09:03] HITS file was successfully produced:
[2025-10-13 08:09:03] -rw------- 1 boincer umatlas 190289533 Oct 13 08:07 shared/HITS.pool.root.1
[2025-10-13 08:09:03]  *** Contents of shared directory: ***
[2025-10-13 08:09:03] total 402828
[2025-10-13 08:09:03] -rw-r--r-- 2 boincer umatlas 219804331 Oct 13 05:23 ATLAS.root_0
[2025-10-13 08:09:03] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 05:23 start_atlas.sh
[2025-10-13 08:09:03] -rw-r--r-- 2 boincer umatlas    569680 Oct 13 05:23 input.tar.gz
[2025-10-13 08:09:03] -rw------- 1 boincer umatlas 190289533 Oct 13 08:07 HITS.pool.root.1
[2025-10-13 08:09:03] -rw------- 1 boincer umatlas   1802240 Oct 13 08:09 result.tar.gz
08:09:04 (16636): run_atlas exited; CPU time 73290.928809
08:09:04 (16636): called boinc_finish(0)

</stderr_txt>
]]>

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