Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:32:44 (3023031): wrapper (7.7.26015): starting
05:32:44 (3023031): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 05:32:44] Arguments: --nthreads 12
[2025-10-13 05:32:44] Threads: 12
[2025-10-13 05:32:44] Checking for CVMFS
[2025-10-13 05:32:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 05:32:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 05:32:45] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 05:32:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 05:32:45] 2.13.2.0 3683012 14052 147536 151656 0 188 38499169 40960000 5645 16776704 0 163558203 99.875 55116016 32597 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 05:32:45] CVMFS is ok
[2025-10-13 05:32:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 05:32:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 05:32:45] Further information can be found at the LHC@home message board.
[2025-10-13 05:32:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 05:32:45] Checking for apptainer binary...
[2025-10-13 05:32:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 05:32:45] Running /usr/bin/apptainer --version
[2025-10-13 05:32:45] apptainer version 1.4.3-1.el9
[2025-10-13 05:32:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 05:32:45] c8-7-4.aglt2.org
[2025-10-13 05:32:45] apptainer works
[2025-10-13 05:32:45] Set ATHENA_PROC_NUMBER=12
[2025-10-13 05:32:45] Set ATHENA_CORE_NUMBER=12
[2025-10-13 05:32:45] Starting ATLAS job with PandaID=6842173962
[2025-10-13 05:32:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 06:00:08]  *** The last 200 lines of the pilot log: ***
[2025-10-13 06:00:08]  replicas=None
[2025-10-13 06:00:08]  scope=mc23_13p6TeV
[2025-10-13 06:00:08]  status=None
[2025-10-13 06:00:08]  status_code=0
[2025-10-13 06:00:08]  storage_token=
[2025-10-13 06:00:08]  surl=/tmp/boinchome/slots/7/PanDA_Pilot-6842173962/log.46676269._095927.job.log.tgz.1
[2025-10-13 06:00:08]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e1/93/log.46676269._095927.job.log.tgz.1
[2025-10-13 06:00:08]  workdir=None
[2025-10-13 06:00:08] ]
[2025-10-13 06:00:08] 2025-10-13 09:59:31,894 | INFO     | transferring file log.46676269._095927.job.log.tgz.1 from /tmp/boinchome/slots/7/PanDA_Pilot-6842173962/log.46676269._095927.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-13 06:00:08] 2025-10-13 09:59:31,894 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/7/PanDA_Pilot-6842173962/log.46676269._095927.job.log.tgz.1 /tmp/boinchome/slots/7/log.46676269._095927.job
[2025-10-13 06:00:08] 2025-10-13 09:59:31,911 | INFO     | adding to output.list: log.46676269._095927.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e1/93/log.46676269._095927.job.log.tg
[2025-10-13 06:00:08] 2025-10-13 09:59:31,912 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 06:00:08] 2025-10-13 09:59:31,912 | INFO     | summary of transferred files:
[2025-10-13 06:00:08] 2025-10-13 09:59:31,912 | INFO     |  -- lfn=log.46676269._095927.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 06:00:08] 2025-10-13 09:59:31,912 | INFO     | stage-out finished correctly
[2025-10-13 06:00:08] 2025-10-13 09:59:31,965 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 06:00:08] 2025-10-13 09:59:32,020 | INFO     | job 6842173962 has state=finished
[2025-10-13 06:00:08] 2025-10-13 09:59:32,021 | INFO     | preparing for final server update for job 6842173962 in state='finished'
[2025-10-13 06:00:08] 2025-10-13 09:59:32,021 | INFO     | this job has now completed (state=finished)
[2025-10-13 06:00:08] 2025-10-13 09:59:32,021 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 06:00:08] 2025-10-13 09:59:32,021 | INFO     | log transfer has been attempted: DONE
[2025-10-13 06:00:08] 2025-10-13 09:59:32,021 | INFO     | job 6842173962 has finished - writing final server update
[2025-10-13 06:00:08] 2025-10-13 09:59:32,022 | INFO     | total number of processed events: 400 (read)
[2025-10-13 06:00:08] 2025-10-13 09:59:32,022 | INFO     | executing command: lscpu
[2025-10-13 06:00:08] 2025-10-13 09:59:32,090 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 06:00:08] 2025-10-13 09:59:32,119 | INFO     | PID=3026807 has CPU usage=10.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-13 06:00:08] 2025-10-13 09:59:32,119 | INFO     | .. there are 8 such processes running
[2025-10-13 06:00:08] 2025-10-13 09:59:33,119 | INFO     | time since job start (1598s) is within the limit (172800.0s)
[2025-10-13 06:00:08] 2025-10-13 09:59:35,125 | INFO     | time since job start (1600s) is within the limit (172800.0s)
[2025-10-13 06:00:08] 2025-10-13 09:59:35,277 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-13 06:00:08] 2025-10-13 09:59:35,280 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3563.8449765624905
[2025-10-13 06:00:08] 2025-10-13 09:59:35,288 | INFO     | using path: /tmp/boinchome/slots/7/PanDA_Pilot-6842173962/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 06:00:08] 2025-10-13 09:59:35,288 | INFO     | extracted standard info from prmon json
[2025-10-13 06:00:08] 2025-10-13 09:59:35,289 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 06:00:08] 2025-10-13 09:59:35,289 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 06:00:08] 2025-10-13 09:59:35,289 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 06:00:08] 2025-10-13 09:59:35,289 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 06:00:08] 2025-10-13 09:59:35,289 | INFO     | fitting pss+swap vs Time
[2025-10-13 06:00:08] 2025-10-13 09:59:35,289 | INFO     | sum of square deviations: 2120970.0
[2025-10-13 06:00:08] 2025-10-13 09:59:35,289 | INFO     | sum of deviations: 35384941.0
[2025-10-13 06:00:08] 2025-10-13 09:59:35,289 | INFO     | mean x: 1760348852.0
[2025-10-13 06:00:08] 2025-10-13 09:59:35,289 | INFO     | mean y: 2438027.4736842103
[2025-10-13 06:00:08] 2025-10-13 09:59:35,289 | INFO     | -- intersect: -29366124595.96641
[2025-10-13 06:00:08] 2025-10-13 09:59:35,289 | INFO     | intersect: -29366124595.96641
[2025-10-13 06:00:08] 2025-10-13 09:59:35,289 | INFO     | chi2: 0.0007539423027356664
[2025-10-13 06:00:08] 2025-10-13 09:59:35,289 | INFO     | -- intersect: -29366124595.96641
[2025-10-13 06:00:08] 2025-10-13 09:59:35,289 | INFO     | current memory leak: 16.68 B/s (using 19 data points, chi2=0.00)
[2025-10-13 06:00:08] 2025-10-13 09:59:35,290 | INFO     | could have reported an average CPU frequency of 3564 MHz (4 samples)
[2025-10-13 06:00:08] 2025-10-13 09:59:35,290 | INFO     | ..............................
[2025-10-13 06:00:08] 2025-10-13 09:59:35,290 | INFO     | . Timing measurements:
[2025-10-13 06:00:08] 2025-10-13 09:59:35,290 | INFO     | . get job = 0 s
[2025-10-13 06:00:08] 2025-10-13 09:59:35,290 | INFO     | . initial setup = 2 s
[2025-10-13 06:00:08] 2025-10-13 09:59:35,290 | INFO     | . payload setup = 4 s
[2025-10-13 06:00:08] 2025-10-13 09:59:35,290 | INFO     | . stage-in = 0 s
[2025-10-13 06:00:08] 2025-10-13 09:59:35,290 | INFO     | . payload execution = 1573 s
[2025-10-13 06:00:08] 2025-10-13 09:59:35,290 | INFO     | . stage-out = 0 s
[2025-10-13 06:00:08] 2025-10-13 09:59:35,290 | INFO     | . log creation = 0 s
[2025-10-13 06:00:08] 2025-10-13 09:59:35,290 | INFO     | ..............................
[2025-10-13 06:00:08] 2025-10-13 09:59:35,538 | INFO     | 
[2025-10-13 06:00:08] 2025-10-13 09:59:35,538 | INFO     | job summary report
[2025-10-13 06:00:08] 2025-10-13 09:59:35,538 | INFO     | --------------------------------------------------
[2025-10-13 06:00:08] 2025-10-13 09:59:35,538 | INFO     | PanDA job id: 6842173962
[2025-10-13 06:00:08] 2025-10-13 09:59:35,538 | INFO     | task id: 46676269
[2025-10-13 06:00:08] 2025-10-13 09:59:35,538 | INFO     | errors: (none)
[2025-10-13 06:00:08] 2025-10-13 09:59:35,538 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 06:00:08] 2025-10-13 09:59:35,538 | INFO     | pilot state: finished 
[2025-10-13 06:00:08] 2025-10-13 09:59:35,538 | INFO     | transexitcode: 0
[2025-10-13 06:00:08] 2025-10-13 09:59:35,538 | INFO     | exeerrorcode: 0
[2025-10-13 06:00:08] 2025-10-13 09:59:35,538 | INFO     | exeerrordiag: 
[2025-10-13 06:00:08] 2025-10-13 09:59:35,538 | INFO     | exitcode: 0
[2025-10-13 06:00:08] 2025-10-13 09:59:35,538 | INFO     | exitmsg: OK
[2025-10-13 06:00:08] 2025-10-13 09:59:35,538 | INFO     | cpuconsumptiontime: 16195 s
[2025-10-13 06:00:08] 2025-10-13 09:59:35,538 | INFO     | nevents: 400
[2025-10-13 06:00:08] 2025-10-13 09:59:35,538 | INFO     | neventsw: 0
[2025-10-13 06:00:08] 2025-10-13 09:59:35,538 | INFO     | pid: 3033252
[2025-10-13 06:00:08] 2025-10-13 09:59:35,538 | INFO     | pgrp: 3033252
[2025-10-13 06:00:08] 2025-10-13 09:59:35,538 | INFO     | corecount: 12
[2025-10-13 06:00:08] 2025-10-13 09:59:35,538 | INFO     | event service: False
[2025-10-13 06:00:08] 2025-10-13 09:59:35,539 | INFO     | sizes: {0: 2348636, 1: 2348835, 4: 2349097, 11: 2349125, 1581: 2373965, 1582: 2383147, 1585: 2383285}
[2025-10-13 06:00:08] 2025-10-13 09:59:35,539 | INFO     | --------------------------------------------------
[2025-10-13 06:00:08] 2025-10-13 09:59:35,539 | INFO     | 
[2025-10-13 06:00:08] 2025-10-13 09:59:35,539 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2025-10-13 06:00:08] 2025-10-13 09:59:35,549 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 06:00:08] 2025-10-13 09:59:35,550 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 06:00:08] 2025-10-13 09:59:35,550 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 06:00:08] 2025-10-13 09:59:35,550 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 06:00:08] 2025-10-13 09:59:35,550 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 06:00:08] 2025-10-13 09:59:35,550 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 06:00:08] 2025-10-13 09:59:35,550 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 06:00:08] 2025-10-13 09:59:35,550 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 06:00:08] 2025-10-13 09:59:35,550 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 06:00:08] 2025-10-13 09:59:35,550 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 06:00:08] 2025-10-13 09:59:35,550 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 06:00:08] 2025-10-13 09:59:35,550 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 06:00:08] 2025-10-13 09:59:35,550 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 06:00:08] 2025-10-13 09:59:35,550 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 06:00:08] 2025-10-13 09:59:35,550 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 06:00:08] 2025-10-13 09:59:35,550 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 06:00:08] 2025-10-13 09:59:35,550 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 06:00:08] 2025-10-13 09:59:35,550 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 06:00:08] 2025-10-13 09:59:35,550 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 06:00:08] 2025-10-13 09:59:35,550 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 06:00:08] 2025-10-13 09:59:35,550 | INFO     | job 6842173962 has completed (purged errors)
[2025-10-13 06:00:08] 2025-10-13 09:59:35,550 | INFO     | overall cleanup function is called
[2025-10-13 06:00:08] 2025-10-13 09:59:35,991 | WARNING  | process 3033252 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 06:00:08] 2025-10-13 09:59:36,258 | INFO     | using path: /tmp/boinchome/slots/7/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 06:00:08] 2025-10-13 09:59:36,557 | INFO     | --- collectZombieJob: --- 10, [3033252]
[2025-10-13 06:00:08] 2025-10-13 09:59:36,557 | INFO     | zombie collector waiting for pid 3033252
[2025-10-13 06:00:08] 2025-10-13 09:59:36,557 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 06:00:08] 2025-10-13 09:59:36,558 | INFO     | collected zombie processes
[2025-10-13 06:00:08] 2025-10-13 09:59:36,558 | INFO     | will attempt to kill all subprocesses of pid=3033252
[2025-10-13 06:00:08] 2025-10-13 09:59:36,625 | INFO     | number of running child processes to parent process 3033252: 1
[2025-10-13 06:00:08] 2025-10-13 09:59:36,626 | INFO     | maximum number of monitored processes: 6
[2025-10-13 06:00:08] 2025-10-13 09:59:36,626 | INFO     | aborting job monitoring since job object (job id=6842173962) has expired
[2025-10-13 06:00:08] 2025-10-13 09:59:36,930 | INFO     | process IDs to be killed: [3033252] (in reverse order)
[2025-10-13 06:00:08] 2025-10-13 09:59:37,044 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 06:00:08] 2025-10-13 09:59:37,044 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 06:00:08] 2025-10-13 09:59:37,059 | INFO     | did not find any defunct processes belonging to 3033252
[2025-10-13 06:00:08] 2025-10-13 09:59:37,072 | INFO     | did not find any defunct processes belonging to 3033252
[2025-10-13 06:00:08] 2025-10-13 09:59:37,072 | INFO     | ready for new job
[2025-10-13 06:00:08] 2025-10-13 09:59:37,072 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 06:00:08] 2025-10-13 09:59:37,073 | INFO     | ***************************************
[2025-10-13 06:00:08] 2025-10-13 09:59:37,073 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 06:00:08] 2025-10-13 09:59:37,073 | INFO     | ***************************************
[2025-10-13 06:00:08] 2025-10-13 09:59:37,073 | INFO     | 
[2025-10-13 06:00:08] 2025-10-13 09:59:37,090 | INFO     | architecture information:
[2025-10-13 06:00:08] 2025-10-13 09:59:37,090 | INFO     | executing command: cat /etc/os-release
[2025-10-13 06:00:08] 2025-10-13 09:59:37,101 | INFO     | cat /etc/os-release:
[2025-10-13 06:00:08] NAME="CentOS Linux"
[2025-10-13 06:00:08] VERSION="7 (Core)"
[2025-10-13 06:00:08] ID="centos"
[2025-10-13 06:00:08] ID_LIKE="rhel fedora"
[2025-10-13 06:00:08] VERSION_ID="7"
[2025-10-13 06:00:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 06:00:08] ANSI_COLOR="0;31"
[2025-10-13 06:00:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 06:00:08] HOME_URL="https://www.centos.org/"
[2025-10-13 06:00:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 06:00:08] 
[2025-10-13 06:00:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 06:00:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 06:00:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 06:00:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 06:00:08] 
[2025-10-13 06:00:08] 2025-10-13 09:59:37,102 | INFO     | ***************************************
[2025-10-13 06:00:08] 2025-10-13 09:59:37,604 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2025-10-13 06:00:08] 2025-10-13 09:59:37,617 | INFO     | sufficient remaining disk space (168153841664 B)
[2025-10-13 06:00:08] 2025-10-13 09:59:37,618 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 06:00:08] 2025-10-13 09:59:37,618 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 06:00:08] 2025-10-13 09:59:37,618 | INFO     | update_server=False
[2025-10-13 06:00:08] 2025-10-13 09:59:37,618 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 06:00:08] 2025-10-13 09:59:37,618 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:00:08] 2025-10-13 09:59:37,618 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 06:00:08] 2025-10-13 09:59:37,619 | INFO     | will abort loop
[2025-10-13 06:00:08] 2025-10-13 09:59:38,026 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 06:00:08] 2025-10-13 09:59:38,360 | INFO     | all data control threads have been joined
[2025-10-13 06:00:08] 2025-10-13 09:59:38,414 | INFO     | all payload control threads have been joined
[2025-10-13 06:00:08] 2025-10-13 09:59:38,622 | INFO     | [job] retrieve thread has finished
[2025-10-13 06:00:08] 2025-10-13 09:59:38,624 | INFO     | [job] job monitor thread has finished
[2025-10-13 06:00:08] 2025-10-13 09:59:38,651 | INFO     | [payload] validate_post thread has finished
[2025-10-13 06:00:08] 2025-10-13 09:59:38,739 | INFO     | [payload] failed_post thread has finished
[2025-10-13 06:00:08] 2025-10-13 09:59:39,036 | INFO     | [data] copytool_in thread has finished
[2025-10-13 06:00:08] 2025-10-13 09:59:39,269 | INFO     | all job control threads have been joined
[2025-10-13 06:00:08] 2025-10-13 09:59:39,365 | INFO     | [data] control thread has finished
[2025-10-13 06:00:08] 2025-10-13 09:59:39,419 | INFO     | [payload] control thread has finished
[2025-10-13 06:00:08] 2025-10-13 09:59:39,612 | INFO     | [job] validate thread has finished
[2025-10-13 06:00:08] 2025-10-13 09:59:39,624 | INFO     | [data] copytool_out thread has finished
[2025-10-13 06:00:08] 2025-10-13 09:59:39,700 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 06:00:08] 2025-10-13 09:59:39,756 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 06:00:08] 2025-10-13 09:59:39,842 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 06:00:08] 2025-10-13 09:59:40,274 | INFO     | [job] control thread has finished
[2025-10-13 06:00:08] 2025-10-13 09:59:40,330 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:00:08] 2025-10-13 09:59:41,336 | INFO     | [job] queue monitor thread has finished
[2025-10-13 06:00:08] 2025-10-13 09:59:42,032 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 06:00:08] 2025-10-13 09:59:48,199 | INFO     | job.realtimelogging is not enabled
[2025-10-13 06:00:08] 2025-10-13 09:59:49,205 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 06:00:08] 2025-10-13 09:59:56,906 | INFO     | [monitor] cgroup control has ended
[2025-10-13 06:00:08] 2025-10-13 09:59:57,912 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140095919028032)>', '<ExcThread(monitor, started 140095424280320)>']
[2025-10-13 06:00:08] 2025-10-13 10:00:02,918 | INFO     | all workflow threads have been joined
[2025-10-13 06:00:08] 2025-10-13 10:00:02,918 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 06:00:08] 2025-10-13 10:00:02,918 | INFO     | traces error code: 0
[2025-10-13 06:00:08] 2025-10-13 10:00:02,919 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 06:00:08] 2025-10-13 10:00:08,631 | INFO     | PID=3026807 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 06:00:08] 2025-10-13 10:00:08,631 | INFO     | .. there are 8 such processes running
[2025-10-13 06:00:08] 2025-10-13 10:00:08,632 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 06:00:08] 2025-10-13 10:00:08,632 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 06:00:08] 2025-10-13 10:00:08,632 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 06:00:08] 2025-10-13 10:00:08,632 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 06:00:08] 2025-10-13 10:00:08,632 | INFO     | [monitor] control thread has ended
[2025-10-13 06:00:08] 2025-10-13 10:00:08,712 [wrapper] ==== pilot stdout END ====
[2025-10-13 06:00:08] 2025-10-13 10:00:08,714 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 06:00:08] 2025-10-13 10:00:08,716 [wrapper] pilotpid: 3026807
[2025-10-13 06:00:08] 2025-10-13 10:00:08,717 [wrapper] Pilot exit status: 0
[2025-10-13 06:00:08] 2025-10-13 10:00:08,724 [wrapper] pandaids: 6842173962
[2025-10-13 06:00:08] 2025-10-13 10:00:08,786 [wrapper] cleanup supervisor_pilot 3128144 3026808
[2025-10-13 06:00:08] 2025-10-13 10:00:08,788 [wrapper] Test setup, not cleaning
[2025-10-13 06:00:08] 2025-10-13 10:00:08,790 [wrapper] apfmon messages muted
[2025-10-13 06:00:08] 2025-10-13 10:00:08,791 [wrapper] ==== wrapper stdout END ====
[2025-10-13 06:00:08] 2025-10-13 10:00:08,792 [wrapper] ==== wrapper stderr END ====
[2025-10-13 06:00:08]  *** Error codes and diagnostics ***
[2025-10-13 06:00:08]     "exeErrorCode": 0,
[2025-10-13 06:00:08]     "exeErrorDiag": "",
[2025-10-13 06:00:08]     "pilotErrorCode": 0,
[2025-10-13 06:00:08]     "pilotErrorDiag": "",
[2025-10-13 06:00:08]  *** Listing of results directory ***
[2025-10-13 06:00:08] total 413556
[2025-10-13 06:00:08] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 23:15 pilot3.tar.gz
[2025-10-13 06:00:08] -rwx------. 1 boincer umatlas     36292 Oct 12 23:30 runpilot2-wrapper.sh
[2025-10-13 06:00:08] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 23:31 queuedata.json
[2025-10-13 06:00:08] -rw-r--r--. 1 boincer umatlas       100 Oct 13 05:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 06:00:08] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 05:32 run_atlas
[2025-10-13 06:00:08] -rw-r--r--. 1 boincer umatlas       105 Oct 13 05:32 job.xml
[2025-10-13 06:00:08] -rw-r--r--. 2 boincer umatlas 223401435 Oct 13 05:32 EVNT.46676267._001948.pool.root.1
[2025-10-13 06:00:08] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 05:32 start_atlas.sh
[2025-10-13 06:00:08] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 05:32 shared
[2025-10-13 06:00:08] -rw-r--r--. 2 boincer umatlas    569686 Oct 13 05:32 input.tar.gz
[2025-10-13 06:00:08] -rw-r--r--. 1 boincer umatlas         0 Oct 13 05:32 boinc_lockfile
[2025-10-13 06:00:08] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 05:32 pandaJob.out
[2025-10-13 06:00:08] -rw-------. 1 boincer umatlas    972849 Oct 13 05:32 agis_schedconf.cvmfs.json
[2025-10-13 06:00:08] -rw-------. 1 boincer umatlas   1560580 Oct 13 05:32 agis_ddmendpoints.agis.ALL.json
[2025-10-13 06:00:08] drwx------. 5 boincer umatlas      4096 Oct 13 05:32 pilot3
[2025-10-13 06:00:08] -rw-r--r--. 1 boincer umatlas      7164 Oct 13 05:56 init_data.xml
[2025-10-13 06:00:08] -rw-------. 1 boincer umatlas 194976257 Oct 13 05:59 HITS.46676269._095927.pool.root.1
[2025-10-13 06:00:08] -rw-r--r--. 1 boincer umatlas       529 Oct 13 05:59 boinc_task_state.xml
[2025-10-13 06:00:08] -rw-------. 1 boincer umatlas        95 Oct 13 05:59 pilot_heartbeat.json
[2025-10-13 06:00:08] -rw-------. 1 boincer umatlas      1029 Oct 13 05:59 memory_monitor_summary.json
[2025-10-13 06:00:08] -rw-------. 1 boincer umatlas    334779 Oct 13 05:59 log.46676269._095927.job.log.tgz.1
[2025-10-13 06:00:08] -rw-------. 1 boincer umatlas      7769 Oct 13 05:59 heartbeat.json
[2025-10-13 06:00:08] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 06:00 boinc_mmap_file
[2025-10-13 06:00:08] -rw-r--r--. 1 boincer umatlas        27 Oct 13 06:00 wrapper_checkpoint.txt
[2025-10-13 06:00:08] -rw-------. 1 boincer umatlas       822 Oct 13 06:00 pilotlog.txt
[2025-10-13 06:00:08] -rw-------. 1 boincer umatlas    269890 Oct 13 06:00 log.46676269._095927.job.log.1
[2025-10-13 06:00:08] -rw-------. 1 boincer umatlas       357 Oct 13 06:00 output.list
[2025-10-13 06:00:08] -rw-r--r--. 1 boincer umatlas       620 Oct 13 06:00 runtime_log
[2025-10-13 06:00:08] -rw-------. 1 boincer umatlas    624640 Oct 13 06:00 result.tar.gz
[2025-10-13 06:00:08] -rw-r--r--. 1 boincer umatlas      8695 Oct 13 06:00 runtime_log.err
[2025-10-13 06:00:08] -rw-------. 1 boincer umatlas       646 Oct 13 06:00 mQWLDm6ROS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmHeVMDmetdj3m.diag
[2025-10-13 06:00:08] -rw-r--r--. 1 boincer umatlas     21885 Oct 13 06:00 stderr.txt
[2025-10-13 06:00:08] HITS file was successfully produced:
[2025-10-13 06:00:08] -rw-------. 1 boincer umatlas 194976257 Oct 13 05:59 shared/HITS.pool.root.1
[2025-10-13 06:00:08]  *** Contents of shared directory: ***
[2025-10-13 06:00:08] total 409768
[2025-10-13 06:00:08] -rw-r--r--. 2 boincer umatlas 223401435 Oct 13 05:32 ATLAS.root_0
[2025-10-13 06:00:08] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 05:32 start_atlas.sh
[2025-10-13 06:00:08] -rw-r--r--. 2 boincer umatlas    569686 Oct 13 05:32 input.tar.gz
[2025-10-13 06:00:08] -rw-------. 1 boincer umatlas 194976257 Oct 13 05:59 HITS.pool.root.1
[2025-10-13 06:00:08] -rw-------. 1 boincer umatlas    624640 Oct 13 06:00 result.tar.gz
06:00:10 (3023031): run_atlas exited; CPU time 16223.222168
06:00:10 (3023031): called boinc_finish(0)

</stderr_txt>
]]>

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