Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:07:09 (3335537): wrapper (7.7.26015): starting
06:07:09 (3335537): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 06:07:09] Arguments: --nthreads 8
[2025-10-13 06:07:09] Threads: 8
[2025-10-13 06:07:09] Checking for CVMFS
[2025-10-13 06:07:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 06:07:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 06:07:10] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 06:07:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 06:07:10] 2.13.1.0 5004 6978 102788 151657 2 306 27495822 40960000 23785 16776704 0 25347804 99.830 10853637 31706 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 06:07:10] CVMFS is ok
[2025-10-13 06:07:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 06:07:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 06:07:10] Further information can be found at the LHC@home message board.
[2025-10-13 06:07:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 06:07:10] Checking for apptainer binary...
[2025-10-13 06:07:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 06:07:10] Running /usr/bin/apptainer --version
[2025-10-13 06:07:10] apptainer version 1.4.3-1.el9
[2025-10-13 06:07:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 06:07:10] c-212-12.aglt2.org
[2025-10-13 06:07:10] apptainer works
[2025-10-13 06:07:10] Set ATHENA_PROC_NUMBER=8
[2025-10-13 06:07:10] Set ATHENA_CORE_NUMBER=8
[2025-10-13 06:07:10] Starting ATLAS job with PandaID=6842605078
[2025-10-13 06:07:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 09:28:50]  *** The last 200 lines of the pilot log: ***
[2025-10-13 09:28:50] 2025-10-13 13:28:10,794 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 09:28:50] 2025-10-13 13:28:10,794 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 09:28:50] 2025-10-13 13:28:10,797 | INFO     | fitting pss+swap vs Time
[2025-10-13 09:28:50] 2025-10-13 13:28:10,797 | INFO     | sum of square deviations: 2370578601.9695354
[2025-10-13 09:28:50] 2025-10-13 13:28:10,798 | INFO     | sum of deviations: 30730451300.47209
[2025-10-13 09:28:50] 2025-10-13 13:28:10,798 | INFO     | mean x: 1760356051.101523
[2025-10-13 09:28:50] 2025-10-13 13:28:10,798 | INFO     | mean y: 2459506.426395939
[2025-10-13 09:28:50] 2025-10-13 13:28:10,798 | INFO     | -- intersect: -22817511894.193676
[2025-10-13 09:28:50] 2025-10-13 13:28:10,798 | INFO     | intersect: -22817511894.193676
[2025-10-13 09:28:50] 2025-10-13 13:28:10,799 | INFO     | chi2: 2.0264820150260734
[2025-10-13 09:28:50] 2025-10-13 13:28:10,799 | INFO     | sum of square deviations: 2194618611.91666
[2025-10-13 09:28:50] 2025-10-13 13:28:10,800 | INFO     | sum of deviations: 41966753365.9167
[2025-10-13 09:28:50] 2025-10-13 13:28:10,800 | INFO     | mean x: 1760355898.6041667
[2025-10-13 09:28:50] 2025-10-13 13:28:10,800 | INFO     | mean y: 2469024.8541666665
[2025-10-13 09:28:50] 2025-10-13 13:28:10,800 | INFO     | -- intersect: -33660064151.440235
[2025-10-13 09:28:50] 2025-10-13 13:28:10,800 | INFO     | intersect: -33660064151.440235
[2025-10-13 09:28:50] 2025-10-13 13:28:10,801 | INFO     | chi2: 1.3329402766197673
[2025-10-13 09:28:50] 2025-10-13 13:28:10,801 | INFO     | current chi2=1.3329402766197673 (change=34.22392763734361 %)
[2025-10-13 09:28:50] 2025-10-13 13:28:10,801 | INFO     | sum of square deviations: 2027589021.860957
[2025-10-13 09:28:50] 2025-10-13 13:28:10,802 | INFO     | sum of deviations: 40671751348.86632
[2025-10-13 09:28:50] 2025-10-13 13:28:10,802 | INFO     | mean x: 1760355746.106952
[2025-10-13 09:28:50] 2025-10-13 13:28:10,802 | INFO     | mean y: 2467842.256684492
[2025-10-13 09:28:50] 2025-10-13 13:28:10,802 | INFO     | -- intersect: -35308806000.357254
[2025-10-13 09:28:50] 2025-10-13 13:28:10,802 | INFO     | intersect: -35308806000.357254
[2025-10-13 09:28:50] 2025-10-13 13:28:10,802 | INFO     | chi2: 1.332576404486737
[2025-10-13 09:28:50] 2025-10-13 13:28:10,802 | INFO     | current chi2=1.332576404486737 (change=0.02729845735872752 %)
[2025-10-13 09:28:50] 2025-10-13 13:28:10,802 | INFO     | right removable region: 186
[2025-10-13 09:28:50] 2025-10-13 13:28:10,803 | INFO     | sum of square deviations: 2194606411.91666
[2025-10-13 09:28:50] 2025-10-13 13:28:10,804 | INFO     | sum of deviations: 3967140015.2708397
[2025-10-13 09:28:50] 2025-10-13 13:28:10,804 | INFO     | mean x: 1760356203.6041667
[2025-10-13 09:28:50] 2025-10-13 13:28:10,804 | INFO     | mean y: 2482404.1614583335
[2025-10-13 09:28:50] 2025-10-13 13:28:10,804 | INFO     | -- intersect: -3179673402.240857
[2025-10-13 09:28:50] 2025-10-13 13:28:10,804 | INFO     | intersect: -3179673402.240857
[2025-10-13 09:28:50] 2025-10-13 13:28:10,804 | INFO     | chi2: 0.730578448961601
[2025-10-13 09:28:50] 2025-10-13 13:28:10,804 | INFO     | current chi2=0.730578448961601 (change=63.94843657409902 %)
[2025-10-13 09:28:50] 2025-10-13 13:28:10,804 | INFO     | sum of square deviations: 2027564621.860957
[2025-10-13 09:28:50] 2025-10-13 13:28:10,806 | INFO     | sum of deviations: 967582644.8235245
[2025-10-13 09:28:50] 2025-10-13 13:28:10,806 | INFO     | mean x: 1760356356.106952
[2025-10-13 09:28:50] 2025-10-13 13:28:10,806 | INFO     | mean y: 2485116.0588235296
[2025-10-13 09:28:50] 2025-10-13 13:28:10,806 | INFO     | -- intersect: -837581947.9001727
[2025-10-13 09:28:50] 2025-10-13 13:28:10,806 | INFO     | intersect: -837581947.9001727
[2025-10-13 09:28:50] 2025-10-13 13:28:10,806 | INFO     | chi2: 0.718063597301161
[2025-10-13 09:28:50] 2025-10-13 13:28:10,806 | INFO     | current chi2=0.718063597301161 (change=1.7130058624406197 %)
[2025-10-13 09:28:50] 2025-10-13 13:28:10,806 | INFO     | left removable region: 20
[2025-10-13 09:28:50] 2025-10-13 13:28:10,806 | INFO     | sum of square deviations: 1418287441.0903573
[2025-10-13 09:28:50] 2025-10-13 13:28:10,807 | INFO     | sum of deviations: 7241669447.024099
[2025-10-13 09:28:50] 2025-10-13 13:28:10,807 | INFO     | mean x: 1760356325.620482
[2025-10-13 09:28:50] 2025-10-13 13:28:10,807 | INFO     | mean y: 2500344.698795181
[2025-10-13 09:28:50] 2025-10-13 13:28:10,807 | INFO     | -- intersect: -8985747206.390743
[2025-10-13 09:28:50] 2025-10-13 13:28:10,807 | INFO     | intersect: -8985747206.390743
[2025-10-13 09:28:50] 2025-10-13 13:28:10,808 | INFO     | chi2: 0.004143799622529328
[2025-10-13 09:28:50] 2025-10-13 13:28:10,808 | INFO     | -- intersect: -8985747206.390743
[2025-10-13 09:28:50] 2025-10-13 13:28:10,808 | INFO     | current memory leak: 5.11 B/s (using 166 data points, chi2=0.00)
[2025-10-13 09:28:50] 2025-10-13 13:28:10,808 | INFO     | could have reported an average CPU frequency of 2933 MHz (10 samples)
[2025-10-13 09:28:50] 2025-10-13 13:28:10,808 | INFO     | ..............................
[2025-10-13 09:28:50] 2025-10-13 13:28:10,808 | INFO     | . Timing measurements:
[2025-10-13 09:28:50] 2025-10-13 13:28:10,808 | INFO     | . get job = 0 s
[2025-10-13 09:28:50] 2025-10-13 13:28:10,809 | INFO     | . initial setup = 2 s
[2025-10-13 09:28:50] 2025-10-13 13:28:10,809 | INFO     | . payload setup = 7 s
[2025-10-13 09:28:50] 2025-10-13 13:28:10,809 | INFO     | . stage-in = 0 s
[2025-10-13 09:28:50] 2025-10-13 13:28:10,809 | INFO     | . payload execution = 12009 s
[2025-10-13 09:28:50] 2025-10-13 13:28:10,809 | INFO     | . stage-out = 2 s
[2025-10-13 09:28:50] 2025-10-13 13:28:10,809 | INFO     | . log creation = 0 s
[2025-10-13 09:28:50] 2025-10-13 13:28:10,809 | INFO     | ..............................
[2025-10-13 09:28:50] 2025-10-13 13:28:11,140 | INFO     | 
[2025-10-13 09:28:50] 2025-10-13 13:28:11,140 | INFO     | job summary report
[2025-10-13 09:28:50] 2025-10-13 13:28:11,140 | INFO     | --------------------------------------------------
[2025-10-13 09:28:50] 2025-10-13 13:28:11,140 | INFO     | PanDA job id: 6842605078
[2025-10-13 09:28:50] 2025-10-13 13:28:11,141 | INFO     | task id: 46676269
[2025-10-13 09:28:50] 2025-10-13 13:28:11,141 | INFO     | errors: (none)
[2025-10-13 09:28:50] 2025-10-13 13:28:11,141 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 09:28:50] 2025-10-13 13:28:11,141 | INFO     | pilot state: finished 
[2025-10-13 09:28:50] 2025-10-13 13:28:11,141 | INFO     | transexitcode: 0
[2025-10-13 09:28:50] 2025-10-13 13:28:11,141 | INFO     | exeerrorcode: 0
[2025-10-13 09:28:50] 2025-10-13 13:28:11,141 | INFO     | exeerrordiag: 
[2025-10-13 09:28:50] 2025-10-13 13:28:11,141 | INFO     | exitcode: 0
[2025-10-13 09:28:50] 2025-10-13 13:28:11,141 | INFO     | exitmsg: OK
[2025-10-13 09:28:50] 2025-10-13 13:28:11,141 | INFO     | cpuconsumptiontime: 39368 s
[2025-10-13 09:28:50] 2025-10-13 13:28:11,141 | INFO     | nevents: 400
[2025-10-13 09:28:50] 2025-10-13 13:28:11,141 | INFO     | neventsw: 0
[2025-10-13 09:28:50] 2025-10-13 13:28:11,141 | INFO     | pid: 3345970
[2025-10-13 09:28:50] 2025-10-13 13:28:11,141 | INFO     | pgrp: 3345970
[2025-10-13 09:28:50] 2025-10-13 13:28:11,141 | INFO     | corecount: 8
[2025-10-13 09:28:50] 2025-10-13 13:28:11,141 | INFO     | event service: False
[2025-10-13 09:28:50] 2025-10-13 13:28:11,142 | INFO     | sizes: {0: 2348756, 6: 2349018, 11: 2349046, 12021: 2378560, 12023: 2387558, 12024: 2387614, 12032: 2387936}
[2025-10-13 09:28:50] 2025-10-13 13:28:11,142 | INFO     | --------------------------------------------------
[2025-10-13 09:28:50] 2025-10-13 13:28:11,142 | INFO     | 
[2025-10-13 09:28:50] 2025-10-13 13:28:11,142 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 09:28:50] 2025-10-13 13:28:11,164 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 09:28:50] 2025-10-13 13:28:11,164 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 09:28:50] 2025-10-13 13:28:11,164 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 09:28:50] 2025-10-13 13:28:11,164 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 09:28:50] 2025-10-13 13:28:11,164 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 09:28:50] 2025-10-13 13:28:11,164 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 09:28:50] 2025-10-13 13:28:11,164 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 09:28:50] 2025-10-13 13:28:11,165 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 09:28:50] 2025-10-13 13:28:11,165 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 09:28:50] 2025-10-13 13:28:11,165 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 09:28:50] 2025-10-13 13:28:11,165 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 09:28:50] 2025-10-13 13:28:11,165 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 09:28:50] 2025-10-13 13:28:11,165 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 09:28:50] 2025-10-13 13:28:11,165 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 09:28:50] 2025-10-13 13:28:11,165 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 09:28:50] 2025-10-13 13:28:11,165 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 09:28:50] 2025-10-13 13:28:11,165 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 09:28:50] 2025-10-13 13:28:11,165 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 09:28:50] 2025-10-13 13:28:11,165 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 09:28:50] 2025-10-13 13:28:11,165 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 09:28:50] 2025-10-13 13:28:11,165 | INFO     | job 6842605078 has completed (purged errors)
[2025-10-13 09:28:50] 2025-10-13 13:28:11,166 | INFO     | overall cleanup function is called
[2025-10-13 09:28:50] 2025-10-13 13:28:12,174 | INFO     | --- collectZombieJob: --- 10, [3345970]
[2025-10-13 09:28:50] 2025-10-13 13:28:12,174 | INFO     | zombie collector waiting for pid 3345970
[2025-10-13 09:28:50] 2025-10-13 13:28:12,174 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 09:28:50] 2025-10-13 13:28:12,175 | INFO     | collected zombie processes
[2025-10-13 09:28:50] 2025-10-13 13:28:12,175 | INFO     | will attempt to kill all subprocesses of pid=3345970
[2025-10-13 09:28:50] 2025-10-13 13:28:12,655 | INFO     | process IDs to be killed: [3345970] (in reverse order)
[2025-10-13 09:28:50] 2025-10-13 13:28:12,789 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 09:28:50] 2025-10-13 13:28:12,789 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 09:28:50] 2025-10-13 13:28:12,806 | INFO     | did not find any defunct processes belonging to 3345970
[2025-10-13 09:28:50] 2025-10-13 13:28:12,824 | INFO     | did not find any defunct processes belonging to 3345970
[2025-10-13 09:28:50] 2025-10-13 13:28:12,824 | INFO     | ready for new job
[2025-10-13 09:28:50] 2025-10-13 13:28:12,825 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 09:28:50] 2025-10-13 13:28:12,827 | INFO     | ***************************************
[2025-10-13 09:28:50] 2025-10-13 13:28:12,827 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 09:28:50] 2025-10-13 13:28:12,827 | INFO     | ***************************************
[2025-10-13 09:28:50] 2025-10-13 13:28:12,827 | INFO     | 
[2025-10-13 09:28:50] 2025-10-13 13:28:12,832 | INFO     | architecture information:
[2025-10-13 09:28:50] 2025-10-13 13:28:12,832 | INFO     | executing command: cat /etc/os-release
[2025-10-13 09:28:50] 2025-10-13 13:28:12,848 | INFO     | cat /etc/os-release:
[2025-10-13 09:28:50] NAME="CentOS Linux"
[2025-10-13 09:28:50] VERSION="7 (Core)"
[2025-10-13 09:28:50] ID="centos"
[2025-10-13 09:28:50] ID_LIKE="rhel fedora"
[2025-10-13 09:28:50] VERSION_ID="7"
[2025-10-13 09:28:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 09:28:50] ANSI_COLOR="0;31"
[2025-10-13 09:28:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 09:28:50] HOME_URL="https://www.centos.org/"
[2025-10-13 09:28:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 09:28:50] 
[2025-10-13 09:28:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 09:28:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 09:28:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 09:28:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 09:28:50] 
[2025-10-13 09:28:50] 2025-10-13 13:28:12,848 | INFO     | ***************************************
[2025-10-13 09:28:50] 2025-10-13 13:28:13,350 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 09:28:50] 2025-10-13 13:28:13,371 | INFO     | sufficient remaining disk space (128112918528 B)
[2025-10-13 09:28:50] 2025-10-13 13:28:13,371 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 09:28:50] 2025-10-13 13:28:13,371 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 09:28:50] 2025-10-13 13:28:13,371 | INFO     | update_server=False
[2025-10-13 09:28:50] 2025-10-13 13:28:13,372 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 09:28:50] 2025-10-13 13:28:13,372 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 09:28:50] 2025-10-13 13:28:13,743 | INFO     | all data control threads have been joined
[2025-10-13 09:28:50] 2025-10-13 13:28:13,782 | INFO     | all payload control threads have been joined
[2025-10-13 09:28:50] 2025-10-13 13:28:13,876 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 09:28:50] 2025-10-13 13:28:13,883 | INFO     | all job control threads have been joined
[2025-10-13 09:28:50] 2025-10-13 13:28:14,222 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 09:28:50] 2025-10-13 13:28:14,225 | INFO     | aborting loop
[2025-10-13 09:28:50] 2025-10-13 13:28:14,372 | INFO     | [job] retrieve thread has finished
[2025-10-13 09:28:50] 2025-10-13 13:28:14,748 | INFO     | [data] control thread has finished
[2025-10-13 09:28:50] 2025-10-13 13:28:14,792 | INFO     | [payload] control thread has finished
[2025-10-13 09:28:50] 2025-10-13 13:28:14,889 | INFO     | [job] control thread has finished
[2025-10-13 09:28:50] 2025-10-13 13:28:14,914 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 09:28:50] 2025-10-13 13:28:15,230 | INFO     | [job] job monitor thread has finished
[2025-10-13 09:28:50] 2025-10-13 13:28:15,232 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 09:28:50] 2025-10-13 13:28:15,305 | INFO     | [data] copytool_in thread has finished
[2025-10-13 09:28:50] 2025-10-13 13:28:15,309 | INFO     | [payload] validate_post thread has finished
[2025-10-13 09:28:50] 2025-10-13 13:28:15,379 | INFO     | [data] copytool_out thread has finished
[2025-10-13 09:28:50] 2025-10-13 13:28:15,716 | INFO     | [job] validate thread has finished
[2025-10-13 09:28:50] 2025-10-13 13:28:15,794 | INFO     | [payload] failed_post thread has finished
[2025-10-13 09:28:50] 2025-10-13 13:28:15,880 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 09:28:50] 2025-10-13 13:28:15,905 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 09:28:50] 2025-10-13 13:28:16,911 | INFO     | [job] queue monitor thread has finished
[2025-10-13 09:28:50] 2025-10-13 13:28:17,885 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 09:28:50] 2025-10-13 13:28:24,180 | INFO     | job.realtimelogging is not enabled
[2025-10-13 09:28:50] 2025-10-13 13:28:25,186 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 09:28:50] 2025-10-13 13:28:43,549 | INFO     | [monitor] cgroup control has ended
[2025-10-13 09:28:50] 2025-10-13 13:28:43,723 | INFO     | PID=3339342 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 09:28:50] 2025-10-13 13:28:43,725 | INFO     | .. there are 21 such processes running
[2025-10-13 09:28:50] 2025-10-13 13:28:43,726 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 09:28:50] 2025-10-13 13:28:43,726 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 09:28:50] 2025-10-13 13:28:43,726 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 09:28:50] 2025-10-13 13:28:44,783 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139975969302336)>', '<ExcThread(monitor, started 139975240697600)>']
[2025-10-13 09:28:50] 2025-10-13 13:28:45,737 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 09:28:50] 2025-10-13 13:28:45,737 | INFO     | [monitor] control thread has ended
[2025-10-13 09:28:50] 2025-10-13 13:28:49,808 | INFO     | all workflow threads have been joined
[2025-10-13 09:28:50] 2025-10-13 13:28:49,808 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 09:28:50] 2025-10-13 13:28:49,809 | INFO     | traces error code: 0
[2025-10-13 09:28:50] 2025-10-13 13:28:49,809 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 09:28:50] 2025-10-13 13:28:49,913 [wrapper] ==== pilot stdout END ====
[2025-10-13 09:28:50] 2025-10-13 13:28:49,917 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 09:28:50] 2025-10-13 13:28:49,919 [wrapper] pilotpid: 3339342
[2025-10-13 09:28:50] 2025-10-13 13:28:49,921 [wrapper] Pilot exit status: 0
[2025-10-13 09:28:50] 2025-10-13 13:28:49,933 [wrapper] pandaids: 6842605078
[2025-10-13 09:28:50] 2025-10-13 13:28:50,021 [wrapper] cleanup supervisor_pilot 3877219 3339343
[2025-10-13 09:28:50] 2025-10-13 13:28:50,025 [wrapper] Test setup, not cleaning
[2025-10-13 09:28:50] 2025-10-13 13:28:50,027 [wrapper] apfmon messages muted
[2025-10-13 09:28:50] 2025-10-13 13:28:50,030 [wrapper] ==== wrapper stdout END ====
[2025-10-13 09:28:50] 2025-10-13 13:28:50,031 [wrapper] ==== wrapper stderr END ====
[2025-10-13 09:28:50]  *** Error codes and diagnostics ***
[2025-10-13 09:28:50]     "exeErrorCode": 0,
[2025-10-13 09:28:50]     "exeErrorDiag": "",
[2025-10-13 09:28:50]     "pilotErrorCode": 0,
[2025-10-13 09:28:50]     "pilotErrorDiag": "",
[2025-10-13 09:28:50]  *** Listing of results directory ***
[2025-10-13 09:28:50] total 420880
[2025-10-13 09:28:50] -rw-r--r--. 1 boincer umatlas    557409 Oct 13 01:28 pilot3.tar.gz
[2025-10-13 09:28:50] -rw-r--r--. 1 boincer umatlas      5112 Oct 13 01:33 queuedata.json
[2025-10-13 09:28:50] -rwx------. 1 boincer umatlas     36292 Oct 13 01:34 runpilot2-wrapper.sh
[2025-10-13 09:28:50] -rw-r--r--. 1 boincer umatlas       100 Oct 13 06:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 09:28:50] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 06:07 run_atlas
[2025-10-13 09:28:50] -rw-r--r--. 1 boincer umatlas       105 Oct 13 06:07 job.xml
[2025-10-13 09:28:50] -rw-r--r--. 2 boincer umatlas 224357340 Oct 13 06:07 EVNT.46676267._004602.pool.root.1
[2025-10-13 09:28:50] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 06:07 start_atlas.sh
[2025-10-13 09:28:50] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 06:07 shared
[2025-10-13 09:28:50] -rw-r--r--. 2 boincer umatlas    569684 Oct 13 06:07 input.tar.gz
[2025-10-13 09:28:50] -rw-r--r--. 1 boincer umatlas         0 Oct 13 06:07 boinc_lockfile
[2025-10-13 09:28:50] -rw-r--r--. 1 boincer umatlas      2549 Oct 13 06:07 pandaJob.out
[2025-10-13 09:28:50] -rw-------. 1 boincer umatlas    972849 Oct 13 06:07 agis_schedconf.cvmfs.json
[2025-10-13 09:28:50] drwx------. 5 boincer umatlas      4096 Oct 13 06:07 pilot3
[2025-10-13 09:28:50] -rw-r--r--. 1 boincer umatlas      6947 Oct 13 09:20 init_data.xml
[2025-10-13 09:28:50] -rw-------. 1 boincer umatlas 198639656 Oct 13 09:26 HITS.46676269._096355.pool.root.1
[2025-10-13 09:28:50] -rw-r--r--. 1 boincer umatlas       531 Oct 13 09:26 boinc_task_state.xml
[2025-10-13 09:28:50] -rw-------. 1 boincer umatlas      1047 Oct 13 09:27 memory_monitor_summary.json
[2025-10-13 09:28:50] -rw-------. 1 boincer umatlas   1560580 Oct 13 09:28 agis_ddmendpoints.agis.ALL.json
[2025-10-13 09:28:50] -rw-------. 1 boincer umatlas    435076 Oct 13 09:28 log.46676269._096355.job.log.tgz.1
[2025-10-13 09:28:50] -rw-------. 1 boincer umatlas      7802 Oct 13 09:28 heartbeat.json
[2025-10-13 09:28:50] -rw-------. 1 boincer umatlas        95 Oct 13 09:28 pilot_heartbeat.json
[2025-10-13 09:28:50] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 09:28 boinc_mmap_file
[2025-10-13 09:28:50] -rw-r--r--. 1 boincer umatlas        28 Oct 13 09:28 wrapper_checkpoint.txt
[2025-10-13 09:28:50] -rw-------. 1 boincer umatlas      4897 Oct 13 09:28 pilotlog.txt
[2025-10-13 09:28:50] -rw-------. 1 boincer umatlas   1602848 Oct 13 09:28 log.46676269._096355.job.log.1
[2025-10-13 09:28:50] -rw-------. 1 boincer umatlas       357 Oct 13 09:28 output.list
[2025-10-13 09:28:50] -rw-r--r--. 1 boincer umatlas       620 Oct 13 09:28 runtime_log
[2025-10-13 09:28:50] -rw-------. 1 boincer umatlas   2058240 Oct 13 09:28 result.tar.gz
[2025-10-13 09:28:50] -rw-r--r--. 1 boincer umatlas      8704 Oct 13 09:28 runtime_log.err
[2025-10-13 09:28:50] -rw-------. 1 boincer umatlas       660 Oct 13 09:28 BIiMDmpNQS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmfhVMDmoHLGBn.diag
[2025-10-13 09:28:50] -rw-r--r--. 1 boincer umatlas     20960 Oct 13 09:28 stderr.txt
[2025-10-13 09:28:50] HITS file was successfully produced:
[2025-10-13 09:28:50] -rw-------. 1 boincer umatlas 198639656 Oct 13 09:26 shared/HITS.pool.root.1
[2025-10-13 09:28:50]  *** Contents of shared directory: ***
[2025-10-13 09:28:50] total 415684
[2025-10-13 09:28:50] -rw-r--r--. 2 boincer umatlas 224357340 Oct 13 06:07 ATLAS.root_0
[2025-10-13 09:28:50] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 06:07 start_atlas.sh
[2025-10-13 09:28:50] -rw-r--r--. 2 boincer umatlas    569684 Oct 13 06:07 input.tar.gz
[2025-10-13 09:28:50] -rw-------. 1 boincer umatlas 198639656 Oct 13 09:26 HITS.pool.root.1
[2025-10-13 09:28:50] -rw-------. 1 boincer umatlas   2058240 Oct 13 09:28 result.tar.gz
09:29:11 (3335537): run_atlas exited; CPU time 39707.018299
09:29:11 (3335537): called boinc_finish(0)

</stderr_txt>
]]>

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