Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
20:06:54 (276050): wrapper (7.7.26015): starting
20:06:54 (276050): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 20:06:54] Arguments: --nthreads 3
[2025-10-13 20:06:54] Threads: 3
[2025-10-13 20:06:54] Checking for CVMFS
[2025-10-13 20:06:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 20:06:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 20:06:54] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 20:06:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 20:06:54] 2.9.2.0 7080 679 70824 151668 2 57 32428959 36864000 0 130560 0 525482 99.991 22732 1029 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 20:06:54] CVMFS is ok
[2025-10-13 20:06:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 20:06:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 20:06:54] Further information can be found at the LHC@home message board.
[2025-10-13 20:06:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 20:06:54] Checking for apptainer binary...
[2025-10-13 20:06:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 20:06:54] Running /usr/bin/apptainer --version
[2025-10-13 20:06:55] apptainer version 1.4.1-1.1
[2025-10-13 20:06:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 20:06:55] legendA163
[2025-10-13 20:06:55] apptainer works
[2025-10-13 20:06:55] Set ATHENA_PROC_NUMBER=3
[2025-10-13 20:06:55] Set ATHENA_CORE_NUMBER=3
[2025-10-13 20:06:55] Starting ATLAS job with PandaID=6841953697
[2025-10-13 20:06:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 21:30:11]  *** The last 200 lines of the pilot log: ***
[2025-10-13 21:30:11]  replicas=None
[2025-10-13 21:30:11]  scope=mc23_13p6TeV
[2025-10-13 21:30:11]  status=None
[2025-10-13 21:30:11]  status_code=0
[2025-10-13 21:30:11]  storage_token=
[2025-10-13 21:30:11]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6841953697/log.46676269._095632.job.log.tgz.1
[2025-10-13 21:30:11]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a3/0d/log.46676269._095632.job.log.tgz.1
[2025-10-13 21:30:11]  workdir=None
[2025-10-13 21:30:11] ]
[2025-10-13 21:30:11] 2025-10-13 19:29:02,929 | INFO     | transferring file log.46676269._095632.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6841953697/log.46676269._095632.job.log.tgz.1 to /local/data/boinc/
[2025-10-13 21:30:11] 2025-10-13 19:29:02,929 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6841953697/log.46676269._095632.job.log.tgz.1 /local/data/boinc/slots/0/log.46676269._0956
[2025-10-13 21:30:11] 2025-10-13 19:29:02,943 | INFO     | adding to output.list: log.46676269._095632.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a3/0d/log.46676269._095632.job.log.tg
[2025-10-13 21:30:11] 2025-10-13 19:29:02,943 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 21:30:11] 2025-10-13 19:29:02,943 | INFO     | summary of transferred files:
[2025-10-13 21:30:11] 2025-10-13 19:29:02,943 | INFO     |  -- lfn=log.46676269._095632.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 21:30:11] 2025-10-13 19:29:02,944 | INFO     | stage-out finished correctly
[2025-10-13 21:30:11] 2025-10-13 19:29:04,226 | INFO     | monitor loop #379: job 0:6841953697 is in state 'finished'
[2025-10-13 21:30:11] 2025-10-13 19:29:04,226 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 21:30:11] 2025-10-13 19:29:04,356 | INFO     | time since job start (4923s) is within the limit (172800.0s)
[2025-10-13 21:30:11] 2025-10-13 19:29:05,052 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 21:30:11] 2025-10-13 19:29:05,935 | INFO     | job 6841953697 has state=finished
[2025-10-13 21:30:11] 2025-10-13 19:29:05,936 | INFO     | preparing for final server update for job 6841953697 in state='finished'
[2025-10-13 21:30:11] 2025-10-13 19:29:05,936 | INFO     | this job has now completed (state=finished)
[2025-10-13 21:30:11] 2025-10-13 19:29:05,936 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 21:30:11] 2025-10-13 19:29:05,936 | INFO     | log transfer has been attempted: DONE
[2025-10-13 21:30:11] 2025-10-13 19:29:05,936 | INFO     | job 6841953697 has finished - writing final server update
[2025-10-13 21:30:11] 2025-10-13 19:29:05,936 | INFO     | total number of processed events: 400 (read)
[2025-10-13 21:30:11] 2025-10-13 19:29:05,937 | INFO     | executing command: lscpu
[2025-10-13 21:30:11] 2025-10-13 19:29:05,953 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 21:30:11] 2025-10-13 19:29:06,362 | INFO     | time since job start (4925s) is within the limit (172800.0s)
[2025-10-13 21:30:11] 2025-10-13 19:29:06,729 | INFO     | monitor loop #380: job 0:6841953697 is in state 'finished'
[2025-10-13 21:30:11] 2025-10-13 19:29:06,729 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 21:30:11] 2025-10-13 19:29:08,367 | INFO     | time since job start (4927s) is within the limit (172800.0s)
[2025-10-13 21:30:11] 2025-10-13 19:29:09,232 | INFO     | monitor loop #381: job 0:6841953697 is in state 'finished'
[2025-10-13 21:30:11] 2025-10-13 19:29:09,232 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 21:30:11] 2025-10-13 19:29:10,373 | INFO     | time since job start (4929s) is within the limit (172800.0s)
[2025-10-13 21:30:11] 2025-10-13 19:29:11,088 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 21:30:11] 2025-10-13 19:29:11,089 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3687.2885
[2025-10-13 21:30:11] 2025-10-13 19:29:11,090 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6841953697/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 21:30:11] 2025-10-13 19:29:11,091 | INFO     | extracted standard info from prmon json
[2025-10-13 21:30:11] 2025-10-13 19:29:11,091 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 21:30:11] 2025-10-13 19:29:11,091 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 21:30:11] 2025-10-13 19:29:11,091 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 21:30:11] 2025-10-13 19:29:11,091 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 21:30:11] 2025-10-13 19:29:11,092 | INFO     | fitting pss+swap vs Time
[2025-10-13 21:30:11] 2025-10-13 19:29:11,092 | INFO     | sum of square deviations: 125630262.5
[2025-10-13 21:30:11] 2025-10-13 19:29:11,092 | INFO     | sum of deviations: 9497791.499999933
[2025-10-13 21:30:11] 2025-10-13 19:29:11,092 | INFO     | mean x: 1760381372.5
[2025-10-13 21:30:11] 2025-10-13 19:29:11,092 | INFO     | mean y: 2367180.608108108
[2025-10-13 21:30:11] 2025-10-13 19:29:11,092 | INFO     | -- intersect: -130719664.10407831
[2025-10-13 21:30:11] 2025-10-13 19:29:11,092 | INFO     | intersect: -130719664.10407831
[2025-10-13 21:30:11] 2025-10-13 19:29:11,092 | INFO     | chi2: 0.014891324136048932
[2025-10-13 21:30:11] 2025-10-13 19:29:11,092 | INFO     | -- intersect: -130719664.10407831
[2025-10-13 21:30:11] 2025-10-13 19:29:11,092 | INFO     | current memory leak: 0.08 B/s (using 74 data points, chi2=0.01)
[2025-10-13 21:30:11] 2025-10-13 19:29:11,092 | INFO     | could have reported an average CPU frequency of 3855 MHz (6 samples)
[2025-10-13 21:30:11] 2025-10-13 19:29:11,092 | INFO     | ..............................
[2025-10-13 21:30:11] 2025-10-13 19:29:11,092 | INFO     | . Timing measurements:
[2025-10-13 21:30:11] 2025-10-13 19:29:11,092 | INFO     | . get job = 0 s
[2025-10-13 21:30:11] 2025-10-13 19:29:11,092 | INFO     | . initial setup = 1 s
[2025-10-13 21:30:11] 2025-10-13 19:29:11,092 | INFO     | . payload setup = 3 s
[2025-10-13 21:30:11] 2025-10-13 19:29:11,092 | INFO     | . stage-in = 0 s
[2025-10-13 21:30:11] 2025-10-13 19:29:11,092 | INFO     | . payload execution = 4901 s
[2025-10-13 21:30:11] 2025-10-13 19:29:11,092 | INFO     | . stage-out = 0 s
[2025-10-13 21:30:11] 2025-10-13 19:29:11,092 | INFO     | . log creation = 0 s
[2025-10-13 21:30:11] 2025-10-13 19:29:11,092 | INFO     | ..............................
[2025-10-13 21:30:11] 2025-10-13 19:29:11,403 | INFO     | 
[2025-10-13 21:30:11] 2025-10-13 19:29:11,403 | INFO     | job summary report
[2025-10-13 21:30:11] 2025-10-13 19:29:11,403 | INFO     | --------------------------------------------------
[2025-10-13 21:30:11] 2025-10-13 19:29:11,403 | INFO     | PanDA job id: 6841953697
[2025-10-13 21:30:11] 2025-10-13 19:29:11,403 | INFO     | task id: 46676269
[2025-10-13 21:30:11] 2025-10-13 19:29:11,403 | INFO     | errors: (none)
[2025-10-13 21:30:11] 2025-10-13 19:29:11,403 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 21:30:11] 2025-10-13 19:29:11,403 | INFO     | pilot state: finished 
[2025-10-13 21:30:11] 2025-10-13 19:29:11,403 | INFO     | transexitcode: 0
[2025-10-13 21:30:11] 2025-10-13 19:29:11,403 | INFO     | exeerrorcode: 0
[2025-10-13 21:30:11] 2025-10-13 19:29:11,403 | INFO     | exeerrordiag: 
[2025-10-13 21:30:11] 2025-10-13 19:29:11,403 | INFO     | exitcode: 0
[2025-10-13 21:30:11] 2025-10-13 19:29:11,403 | INFO     | exitmsg: OK
[2025-10-13 21:30:11] 2025-10-13 19:29:11,404 | INFO     | cpuconsumptiontime: 14109 s
[2025-10-13 21:30:11] 2025-10-13 19:29:11,404 | INFO     | nevents: 400
[2025-10-13 21:30:11] 2025-10-13 19:29:11,404 | INFO     | neventsw: 0
[2025-10-13 21:30:11] 2025-10-13 19:29:11,404 | INFO     | pid: 286230
[2025-10-13 21:30:11] 2025-10-13 19:29:11,404 | INFO     | pgrp: 286230
[2025-10-13 21:30:11] 2025-10-13 19:29:11,404 | INFO     | corecount: 3
[2025-10-13 21:30:11] 2025-10-13 19:29:11,404 | INFO     | event service: False
[2025-10-13 21:30:11] 2025-10-13 19:29:11,404 | INFO     | sizes: {0: 2348810, 3: 2349072, 11: 2349100, 4908: 2384511, 4911: 2384511, 4917: 2384705}
[2025-10-13 21:30:11] 2025-10-13 19:29:11,404 | INFO     | --------------------------------------------------
[2025-10-13 21:30:11] 2025-10-13 19:29:11,404 | INFO     | 
[2025-10-13 21:30:11] 2025-10-13 19:29:11,404 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-13 21:30:11] 2025-10-13 19:29:11,419 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 21:30:11] 2025-10-13 19:29:11,419 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 21:30:11] 2025-10-13 19:29:11,419 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 21:30:11] 2025-10-13 19:29:11,419 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 21:30:11] 2025-10-13 19:29:11,419 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 21:30:11] 2025-10-13 19:29:11,419 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 21:30:11] 2025-10-13 19:29:11,419 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 21:30:11] 2025-10-13 19:29:11,420 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 21:30:11] 2025-10-13 19:29:11,420 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 21:30:11] 2025-10-13 19:29:11,420 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 21:30:11] 2025-10-13 19:29:11,420 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 21:30:11] 2025-10-13 19:29:11,420 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 21:30:11] 2025-10-13 19:29:11,420 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 21:30:11] 2025-10-13 19:29:11,420 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 21:30:11] 2025-10-13 19:29:11,420 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 21:30:11] 2025-10-13 19:29:11,420 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 21:30:11] 2025-10-13 19:29:11,420 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 21:30:11] 2025-10-13 19:29:11,420 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 21:30:11] 2025-10-13 19:29:11,420 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 21:30:11] 2025-10-13 19:29:11,420 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 21:30:11] 2025-10-13 19:29:11,420 | INFO     | job 6841953697 has completed (purged errors)
[2025-10-13 21:30:11] 2025-10-13 19:29:11,420 | INFO     | overall cleanup function is called
[2025-10-13 21:30:11] 2025-10-13 19:29:12,427 | INFO     | --- collectZombieJob: --- 10, [286230]
[2025-10-13 21:30:11] 2025-10-13 19:29:12,427 | INFO     | zombie collector waiting for pid 286230
[2025-10-13 21:30:11] 2025-10-13 19:29:12,427 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 21:30:11] 2025-10-13 19:29:12,427 | INFO     | collected zombie processes
[2025-10-13 21:30:11] 2025-10-13 19:29:12,427 | INFO     | will attempt to kill all subprocesses of pid=286230
[2025-10-13 21:30:11] 2025-10-13 19:29:12,483 | INFO     | process IDs to be killed: [286230] (in reverse order)
[2025-10-13 21:30:11] 2025-10-13 19:29:12,511 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 21:30:11] 2025-10-13 19:29:12,511 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 21:30:11] 2025-10-13 19:29:12,513 | INFO     | did not find any defunct processes belonging to 286230
[2025-10-13 21:30:11] 2025-10-13 19:29:12,514 | INFO     | did not find any defunct processes belonging to 286230
[2025-10-13 21:30:11] 2025-10-13 19:29:12,514 | INFO     | ready for new job
[2025-10-13 21:30:11] 2025-10-13 19:29:12,515 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 21:30:11] 2025-10-13 19:29:12,515 | INFO     | ***************************************
[2025-10-13 21:30:11] 2025-10-13 19:29:12,515 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 21:30:11] 2025-10-13 19:29:12,515 | INFO     | ***************************************
[2025-10-13 21:30:11] 2025-10-13 19:29:12,515 | INFO     | 
[2025-10-13 21:30:11] 2025-10-13 19:29:12,516 | INFO     | architecture information:
[2025-10-13 21:30:11] 2025-10-13 19:29:12,516 | INFO     | executing command: cat /etc/os-release
[2025-10-13 21:30:11] 2025-10-13 19:29:12,525 | INFO     | cat /etc/os-release:
[2025-10-13 21:30:11] NAME="CentOS Linux"
[2025-10-13 21:30:11] VERSION="7 (Core)"
[2025-10-13 21:30:11] ID="centos"
[2025-10-13 21:30:11] ID_LIKE="rhel fedora"
[2025-10-13 21:30:11] VERSION_ID="7"
[2025-10-13 21:30:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 21:30:11] ANSI_COLOR="0;31"
[2025-10-13 21:30:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 21:30:11] HOME_URL="https://www.centos.org/"
[2025-10-13 21:30:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 21:30:11] 
[2025-10-13 21:30:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 21:30:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 21:30:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 21:30:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 21:30:11] 
[2025-10-13 21:30:11] 2025-10-13 19:29:12,525 | INFO     | ***************************************
[2025-10-13 21:30:11] 2025-10-13 19:29:13,029 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 21:30:11] 2025-10-13 19:29:13,042 | INFO     | sufficient remaining disk space (373718777856 B)
[2025-10-13 21:30:11] 2025-10-13 19:29:13,042 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 21:30:11] 2025-10-13 19:29:13,042 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 21:30:11] 2025-10-13 19:29:13,042 | INFO     | update_server=False
[2025-10-13 21:30:11] 2025-10-13 19:29:13,042 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 21:30:11] 2025-10-13 19:29:13,043 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 21:30:11] 2025-10-13 19:29:13,043 | INFO     | aborting loop
[2025-10-13 21:30:11] 2025-10-13 19:29:13,043 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 21:30:11] 2025-10-13 19:29:13,385 | INFO     | all data control threads have been joined
[2025-10-13 21:30:11] 2025-10-13 19:29:13,490 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 21:30:11] 2025-10-13 19:29:13,823 | INFO     | all job control threads have been joined
[2025-10-13 21:30:11] 2025-10-13 19:29:13,957 | INFO     | all payload control threads have been joined
[2025-10-13 21:30:11] 2025-10-13 19:29:14,048 | INFO     | [job] job monitor thread has finished
[2025-10-13 21:30:11] 2025-10-13 19:29:14,049 | INFO     | [job] retrieve thread has finished
[2025-10-13 21:30:11] 2025-10-13 19:29:14,049 | INFO     | [job] queue monitor thread has finished
[2025-10-13 21:30:11] 2025-10-13 19:29:14,066 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 21:30:11] 2025-10-13 19:29:14,091 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 21:30:11] 2025-10-13 19:29:14,391 | INFO     | [data] control thread has finished
[2025-10-13 21:30:11] 2025-10-13 19:29:14,391 | INFO     | [payload] validate_post thread has finished
[2025-10-13 21:30:11] 2025-10-13 19:29:14,662 | INFO     | [payload] failed_post thread has finished
[2025-10-13 21:30:11] 2025-10-13 19:29:14,829 | INFO     | [job] control thread has finished
[2025-10-13 21:30:11] 2025-10-13 19:29:14,963 | INFO     | [payload] control thread has finished
[2025-10-13 21:30:11] 2025-10-13 19:29:15,161 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 21:30:11] 2025-10-13 19:29:15,282 | INFO     | [data] copytool_in thread has finished
[2025-10-13 21:30:11] 2025-10-13 19:29:15,434 | INFO     | [job] validate thread has finished
[2025-10-13 21:30:11] 2025-10-13 19:29:15,496 | INFO     | [data] copytool_out thread has finished
[2025-10-13 21:30:11] 2025-10-13 19:29:15,593 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 21:30:11] 2025-10-13 19:29:19,599 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 21:30:11] 2025-10-13 19:29:23,736 | INFO     | job.realtimelogging is not enabled
[2025-10-13 21:30:11] 2025-10-13 19:29:24,741 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 21:30:11] 2025-10-13 19:29:43,521 | INFO     | PID=279778 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 21:30:11] 2025-10-13 19:29:43,521 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 21:30:11] 2025-10-13 19:29:43,521 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 21:30:11] 2025-10-13 19:29:43,521 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 21:30:11] 2025-10-13 19:30:06,136 | INFO     | [monitor] cgroup control has ended
[2025-10-13 21:30:11] 2025-10-13 19:30:06,199 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140228850034496)>', '<ExcThread(monitor, started 140227947501312)>']
[2025-10-13 21:30:11] 2025-10-13 19:30:06,637 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 21:30:11] 2025-10-13 19:30:06,637 | INFO     | [monitor] control thread has ended
[2025-10-13 21:30:11] 2025-10-13 19:30:11,214 | INFO     | all workflow threads have been joined
[2025-10-13 21:30:11] 2025-10-13 19:30:11,215 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 21:30:11] 2025-10-13 19:30:11,215 | INFO     | traces error code: 0
[2025-10-13 21:30:11] 2025-10-13 19:30:11,215 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 21:30:11] 2025-10-13 19:30:11,266 [wrapper] ==== pilot stdout END ====
[2025-10-13 21:30:11] 2025-10-13 19:30:11,269 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 21:30:11] 2025-10-13 19:30:11,272 [wrapper] pilotpid: 279778
[2025-10-13 21:30:11] 2025-10-13 19:30:11,274 [wrapper] Pilot exit status: 0
[2025-10-13 21:30:11] 2025-10-13 19:30:11,282 [wrapper] pandaids: 6841953697
[2025-10-13 21:30:11] 2025-10-13 19:30:11,302 [wrapper] cleanup supervisor_pilot  301190 279779
[2025-10-13 21:30:11] 2025-10-13 19:30:11,305 [wrapper] Test setup, not cleaning
[2025-10-13 21:30:11] 2025-10-13 19:30:11,307 [wrapper] apfmon messages muted
[2025-10-13 21:30:11] 2025-10-13 19:30:11,310 [wrapper] ==== wrapper stdout END ====
[2025-10-13 21:30:11] 2025-10-13 19:30:11,312 [wrapper] ==== wrapper stderr END ====
[2025-10-13 21:30:11]  *** Error codes and diagnostics ***
[2025-10-13 21:30:11]     "exeErrorCode": 0,
[2025-10-13 21:30:11]     "exeErrorDiag": "",
[2025-10-13 21:30:11]     "pilotErrorCode": 0,
[2025-10-13 21:30:11]     "pilotErrorDiag": "",
[2025-10-13 21:30:11]  *** Listing of results directory ***
[2025-10-13 21:30:11] total 408688
[2025-10-13 21:30:11] -rw-r--r-- 1 boinc boinc      5112 Oct 13 05:15 queuedata.json
[2025-10-13 21:30:11] -rw-r--r-- 1 boinc boinc    557409 Oct 13 05:15 pilot3.tar.gz
[2025-10-13 21:30:11] -rwx------ 1 boinc boinc     36292 Oct 13 05:15 runpilot2-wrapper.sh
[2025-10-13 21:30:11] -rw-r--r-- 1 boinc boinc       100 Oct 13 20:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 21:30:11] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 20:06 run_atlas
[2025-10-13 21:30:11] -rw-r--r-- 1 boinc boinc       105 Oct 13 20:06 job.xml
[2025-10-13 21:30:11] -rw-r--r-- 2 boinc boinc 220231488 Oct 13 20:06 EVNT.46676267._002304.pool.root.1
[2025-10-13 21:30:11] -rw-r--r-- 2 boinc boinc    569683 Oct 13 20:06 input.tar.gz
[2025-10-13 21:30:11] -rw-r--r-- 2 boinc boinc     15120 Oct 13 20:06 start_atlas.sh
[2025-10-13 21:30:11] drwxrwx--x 2 boinc boinc      4096 Oct 13 20:06 shared
[2025-10-13 21:30:11] -rw-r--r-- 1 boinc boinc         0 Oct 13 20:06 boinc_setup_complete
[2025-10-13 21:30:11] -rw-r--r-- 1 boinc boinc      6448 Oct 13 20:06 init_data.xml
[2025-10-13 21:30:11] -rw-r--r-- 1 boinc boinc         0 Oct 13 20:06 boinc_lockfile
[2025-10-13 21:30:11] -rw-r--r-- 1 boinc boinc      2550 Oct 13 20:06 pandaJob.out
[2025-10-13 21:30:11] -rw------- 1 boinc boinc    972791 Oct 13 20:07 agis_schedconf.cvmfs.json
[2025-10-13 21:30:11] -rw------- 1 boinc boinc   1560580 Oct 13 20:07 agis_ddmendpoints.agis.ALL.json
[2025-10-13 21:30:11] drwx------ 5 boinc boinc      4096 Oct 13 20:07 pilot3
[2025-10-13 21:30:11] -rw------- 1 boinc boinc 192378427 Oct 13 21:28 HITS.46676269._095632.pool.root.1
[2025-10-13 21:30:11] -rw-r--r-- 1 boinc boinc       529 Oct 13 21:28 boinc_task_state.xml
[2025-10-13 21:30:11] -rw------- 1 boinc boinc      1015 Oct 13 21:28 memory_monitor_summary.json
[2025-10-13 21:30:11] -rw------- 1 boinc boinc    267770 Oct 13 21:29 log.46676269._095632.job.log.tgz.1
[2025-10-13 21:30:11] -rw------- 1 boinc boinc      7748 Oct 13 21:29 heartbeat.json
[2025-10-13 21:30:11] -rw------- 1 boinc boinc        95 Oct 13 21:29 pilot_heartbeat.json
[2025-10-13 21:30:11] -rw-r--r-- 1 boinc boinc        27 Oct 13 21:30 wrapper_checkpoint.txt
[2025-10-13 21:30:11] -rw-r--r-- 1 boinc boinc      8192 Oct 13 21:30 boinc_mmap_file
[2025-10-13 21:30:11] -rw------- 1 boinc boinc      4823 Oct 13 21:30 pilotlog.txt
[2025-10-13 21:30:11] -rw------- 1 boinc boinc    722515 Oct 13 21:30 log.46676269._095632.job.log.1
[2025-10-13 21:30:11] -rw------- 1 boinc boinc       357 Oct 13 21:30 output.list
[2025-10-13 21:30:11] -rw-r--r-- 1 boinc boinc       620 Oct 13 21:30 runtime_log
[2025-10-13 21:30:11] -rw------- 1 boinc boinc   1013760 Oct 13 21:30 result.tar.gz
[2025-10-13 21:30:11] -rw-r--r-- 1 boinc boinc      8797 Oct 13 21:30 runtime_log.err
[2025-10-13 21:30:11] -rw------- 1 boinc boinc       662 Oct 13 21:30 CWZKDm7COS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmsbVMDmbVi74m.diag
[2025-10-13 21:30:11] -rw-r--r-- 1 boinc boinc     21794 Oct 13 21:30 stderr.txt
[2025-10-13 21:30:11] HITS file was successfully produced:
[2025-10-13 21:30:11] -rw------- 1 boinc boinc 192378427 Oct 13 21:28 shared/HITS.pool.root.1
[2025-10-13 21:30:11]  *** Contents of shared directory: ***
[2025-10-13 21:30:11] total 404516
[2025-10-13 21:30:11] -rw-r--r-- 2 boinc boinc 220231488 Oct 13 20:06 ATLAS.root_0
[2025-10-13 21:30:11] -rw-r--r-- 2 boinc boinc    569683 Oct 13 20:06 input.tar.gz
[2025-10-13 21:30:11] -rw-r--r-- 2 boinc boinc     15120 Oct 13 20:06 start_atlas.sh
[2025-10-13 21:30:11] -rw------- 1 boinc boinc 192378427 Oct 13 21:28 HITS.pool.root.1
[2025-10-13 21:30:11] -rw------- 1 boinc boinc   1013760 Oct 13 21:30 result.tar.gz
21:30:12 (276050): run_atlas exited; CPU time 14134.412365
21:30:12 (276050): called boinc_finish(0)

</stderr_txt>
]]>

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