Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:14:53 (10398): wrapper (7.7.26015): starting
05:14:53 (10398): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 05:14:53] Arguments: --nthreads 8
[2025-10-13 05:14:53] Threads: 8
[2025-10-13 05:14:53] Checking for CVMFS
[2025-10-13 05:14:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 05:14:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 05:14:53] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 05:14:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 05:14:53] 2.11.2.0 2936 196980 79724 151654 2 59 13376318 20275200 1 130560 1 68539327 99.976 8550391 26909 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 05:14:53] CVMFS is ok
[2025-10-13 05:14:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 05:14:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 05:14:53] Further information can be found at the LHC@home message board.
[2025-10-13 05:14:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 05:14:53] Checking for apptainer binary...
[2025-10-13 05:14:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 05:14:53] Running /usr/bin/apptainer --version
[2025-10-13 05:14:53] apptainer version 1.3.2-1.el7
[2025-10-13 05:14:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 05:14:55] c-204-13.aglt2.org
[2025-10-13 05:14:55] apptainer works
[2025-10-13 05:14:55] Set ATHENA_PROC_NUMBER=8
[2025-10-13 05:14:55] Set ATHENA_CORE_NUMBER=8
[2025-10-13 05:14:55] Starting ATLAS job with PandaID=6841259075
[2025-10-13 05:14:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 07:27:32]  *** The last 200 lines of the pilot log: ***
[2025-10-13 07:27:32] 2025-10-13 11:26:35,947 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 07:27:32] 2025-10-13 11:26:35,948 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 07:27:32] 2025-10-13 11:26:35,948 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 07:27:32] 2025-10-13 11:26:35,950 | INFO     | fitting pss+swap vs Time
[2025-10-13 07:27:32] 2025-10-13 11:26:35,950 | INFO     | sum of square deviations: 665612480.0
[2025-10-13 07:27:32] 2025-10-13 11:26:35,951 | INFO     | sum of deviations: 10312160288.00001
[2025-10-13 07:27:32] 2025-10-13 11:26:35,951 | INFO     | mean x: 1760350850.0
[2025-10-13 07:27:32] 2025-10-13 11:26:35,951 | INFO     | mean y: 2453742.92248062
[2025-10-13 07:27:32] 2025-10-13 11:26:35,951 | INFO     | -- intersect: -27270202154.871174
[2025-10-13 07:27:32] 2025-10-13 11:26:35,952 | INFO     | intersect: -27270202154.871174
[2025-10-13 07:27:32] 2025-10-13 11:26:35,952 | INFO     | chi2: 2.4023773525394985
[2025-10-13 07:27:32] 2025-10-13 11:26:35,952 | INFO     | sum of square deviations: 591173875.0
[2025-10-13 07:27:32] 2025-10-13 11:26:35,953 | INFO     | sum of deviations: 18757656647.999992
[2025-10-13 07:27:32] 2025-10-13 11:26:35,953 | INFO     | mean x: 1760350697.5
[2025-10-13 07:27:32] 2025-10-13 11:26:35,953 | INFO     | mean y: 2470464.0322580645
[2025-10-13 07:27:32] 2025-10-13 11:26:35,953 | INFO     | -- intersect: -55852592420.423355
[2025-10-13 07:27:32] 2025-10-13 11:26:35,953 | INFO     | intersect: -55852592420.423355
[2025-10-13 07:27:32] 2025-10-13 11:26:35,954 | INFO     | chi2: 1.5310934711488626
[2025-10-13 07:27:32] 2025-10-13 11:26:35,954 | INFO     | current chi2=1.5310934711488626 (change=36.26756972503181 %)
[2025-10-13 07:27:32] 2025-10-13 11:26:35,954 | INFO     | sum of square deviations: 522502820.0
[2025-10-13 07:27:32] 2025-10-13 11:26:35,954 | INFO     | sum of deviations: 18057001498.0
[2025-10-13 07:27:32] 2025-10-13 11:26:35,955 | INFO     | mean x: 1760350545.0
[2025-10-13 07:27:32] 2025-10-13 11:26:35,955 | INFO     | mean y: 2468908.4201680673
[2025-10-13 07:27:32] 2025-10-13 11:26:35,955 | INFO     | -- intersect: -60832901182.15679
[2025-10-13 07:27:32] 2025-10-13 11:26:35,955 | INFO     | intersect: -60832901182.15679
[2025-10-13 07:27:32] 2025-10-13 11:26:35,955 | INFO     | chi2: 1.5323641600404352
[2025-10-13 07:27:32] 2025-10-13 11:26:35,955 | INFO     | current chi2=1.5323641600404352 (change=-0.08299224805779434 %)
[2025-10-13 07:27:32] 2025-10-13 11:26:35,955 | INFO     | right removable region: 118
[2025-10-13 07:27:32] 2025-10-13 11:26:35,956 | INFO     | sum of square deviations: 591173875.0
[2025-10-13 07:27:32] 2025-10-13 11:26:35,956 | INFO     | sum of deviations: -10496497713.0
[2025-10-13 07:27:32] 2025-10-13 11:26:35,956 | INFO     | mean x: 1760351002.5
[2025-10-13 07:27:32] 2025-10-13 11:26:35,957 | INFO     | mean y: 2495765.209677419
[2025-10-13 07:27:32] 2025-10-13 11:26:35,957 | INFO     | -- intersect: 31258139922.046795
[2025-10-13 07:27:32] 2025-10-13 11:26:35,957 | INFO     | intersect: 31258139922.046795
[2025-10-13 07:27:32] 2025-10-13 11:26:35,957 | INFO     | chi2: 0.9571458321478928
[2025-10-13 07:27:32] 2025-10-13 11:26:35,957 | INFO     | current chi2=0.9571458321478928 (change=60.158389308152785 %)
[2025-10-13 07:27:32] 2025-10-13 11:26:35,958 | INFO     | sum of square deviations: 522502820.0
[2025-10-13 07:27:32] 2025-10-13 11:26:35,958 | INFO     | sum of deviations: -13334387476.0
[2025-10-13 07:27:32] 2025-10-13 11:26:35,958 | INFO     | mean x: 1760351155.0
[2025-10-13 07:27:32] 2025-10-13 11:26:35,958 | INFO     | mean y: 2501949.1092436975
[2025-10-13 07:27:32] 2025-10-13 11:26:35,959 | INFO     | -- intersect: 44927052585.20751
[2025-10-13 07:27:32] 2025-10-13 11:26:35,959 | INFO     | intersect: 44927052585.20751
[2025-10-13 07:27:32] 2025-10-13 11:26:35,959 | INFO     | chi2: 0.9160841205362704
[2025-10-13 07:27:32] 2025-10-13 11:26:35,959 | INFO     | current chi2=0.9160841205362704 (change=4.29001623707408 %)
[2025-10-13 07:27:32] 2025-10-13 11:26:35,959 | INFO     | left removable region: 20
[2025-10-13 07:27:32] 2025-10-13 11:26:35,959 | INFO     | sum of square deviations: 291817564.5
[2025-10-13 07:27:32] 2025-10-13 11:26:35,960 | INFO     | sum of deviations: -3785177215.5
[2025-10-13 07:27:32] 2025-10-13 11:26:35,960 | INFO     | mean x: 1760351124.5
[2025-10-13 07:27:32] 2025-10-13 11:26:35,960 | INFO     | mean y: 2521306.9897959186
[2025-10-13 07:27:32] 2025-10-13 11:26:35,960 | INFO     | -- intersect: 22836105636.137344
[2025-10-13 07:27:32] 2025-10-13 11:26:35,960 | INFO     | intersect: 22836105636.137344
[2025-10-13 07:27:32] 2025-10-13 11:26:35,961 | INFO     | chi2: 0.007709970345607405
[2025-10-13 07:27:32] 2025-10-13 11:26:35,961 | INFO     | -- intersect: 22836105636.137344
[2025-10-13 07:27:32] 2025-10-13 11:26:35,961 | INFO     | current memory leak: -12.97 B/s (using 98 data points, chi2=0.01)
[2025-10-13 07:27:32] 2025-10-13 11:26:35,961 | INFO     | could have reported an average CPU frequency of 1985 MHz (8 samples)
[2025-10-13 07:27:32] 2025-10-13 11:26:35,961 | INFO     | ..............................
[2025-10-13 07:27:32] 2025-10-13 11:26:35,961 | INFO     | . Timing measurements:
[2025-10-13 07:27:32] 2025-10-13 11:26:35,962 | INFO     | . get job = 0 s
[2025-10-13 07:27:32] 2025-10-13 11:26:35,962 | INFO     | . initial setup = 2 s
[2025-10-13 07:27:32] 2025-10-13 11:26:35,962 | INFO     | . payload setup = 8 s
[2025-10-13 07:27:32] 2025-10-13 11:26:35,962 | INFO     | . stage-in = 0 s
[2025-10-13 07:27:32] 2025-10-13 11:26:35,962 | INFO     | . payload execution = 7841 s
[2025-10-13 07:27:32] 2025-10-13 11:26:35,962 | INFO     | . stage-out = 0 s
[2025-10-13 07:27:32] 2025-10-13 11:26:35,962 | INFO     | . log creation = 0 s
[2025-10-13 07:27:32] 2025-10-13 11:26:35,962 | INFO     | ..............................
[2025-10-13 07:27:32] 2025-10-13 11:26:36,054 | INFO     | 
[2025-10-13 07:27:32] 2025-10-13 11:26:36,054 | INFO     | job summary report
[2025-10-13 07:27:32] 2025-10-13 11:26:36,054 | INFO     | --------------------------------------------------
[2025-10-13 07:27:32] 2025-10-13 11:26:36,054 | INFO     | PanDA job id: 6841259075
[2025-10-13 07:27:32] 2025-10-13 11:26:36,055 | INFO     | task id: 46676269
[2025-10-13 07:27:32] 2025-10-13 11:26:36,055 | INFO     | errors: (none)
[2025-10-13 07:27:32] 2025-10-13 11:26:36,055 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 07:27:32] 2025-10-13 11:26:36,055 | INFO     | pilot state: finished 
[2025-10-13 07:27:32] 2025-10-13 11:26:36,055 | INFO     | transexitcode: 0
[2025-10-13 07:27:32] 2025-10-13 11:26:36,055 | INFO     | exeerrorcode: 0
[2025-10-13 07:27:32] 2025-10-13 11:26:36,056 | INFO     | exeerrordiag: 
[2025-10-13 07:27:32] 2025-10-13 11:26:36,056 | INFO     | exitcode: 0
[2025-10-13 07:27:32] 2025-10-13 11:26:36,056 | INFO     | exitmsg: OK
[2025-10-13 07:27:32] 2025-10-13 11:26:36,056 | INFO     | cpuconsumptiontime: 57442 s
[2025-10-13 07:27:32] 2025-10-13 11:26:36,056 | INFO     | nevents: 400
[2025-10-13 07:27:32] 2025-10-13 11:26:36,056 | INFO     | neventsw: 0
[2025-10-13 07:27:32] 2025-10-13 11:26:36,056 | INFO     | pid: 20725
[2025-10-13 07:27:32] 2025-10-13 11:26:36,056 | INFO     | pgrp: 20725
[2025-10-13 07:27:32] 2025-10-13 11:26:36,057 | INFO     | corecount: 8
[2025-10-13 07:27:32] 2025-10-13 11:26:36,057 | INFO     | event service: False
[2025-10-13 07:27:32] 2025-10-13 11:26:36,057 | INFO     | sizes: {0: 2348636, 1: 2348835, 7: 2349097, 12: 2349125, 7853: 2376755, 7855: 2385937, 7864: 2386075}
[2025-10-13 07:27:32] 2025-10-13 11:26:36,057 | INFO     | --------------------------------------------------
[2025-10-13 07:27:32] 2025-10-13 11:26:36,057 | INFO     | 
[2025-10-13 07:27:32] 2025-10-13 11:26:36,057 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 07:27:32] 2025-10-13 11:26:36,085 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 07:27:32] 2025-10-13 11:26:36,086 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 07:27:32] 2025-10-13 11:26:36,086 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 07:27:32] 2025-10-13 11:26:36,086 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 07:27:32] 2025-10-13 11:26:36,086 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 07:27:32] 2025-10-13 11:26:36,086 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 07:27:32] 2025-10-13 11:26:36,087 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 07:27:32] 2025-10-13 11:26:36,087 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 07:27:32] 2025-10-13 11:26:36,087 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 07:27:32] 2025-10-13 11:26:36,088 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 07:27:32] 2025-10-13 11:26:36,088 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 07:27:32] 2025-10-13 11:26:36,088 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 07:27:32] 2025-10-13 11:26:36,088 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 07:27:32] 2025-10-13 11:26:36,088 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 07:27:32] 2025-10-13 11:26:36,089 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 07:27:32] 2025-10-13 11:26:36,089 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 07:27:32] 2025-10-13 11:26:36,089 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 07:27:32] 2025-10-13 11:26:36,090 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 07:27:32] 2025-10-13 11:26:36,090 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 07:27:32] 2025-10-13 11:26:36,090 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 07:27:32] 2025-10-13 11:26:36,091 | INFO     | job 6841259075 has completed (purged errors)
[2025-10-13 07:27:32] 2025-10-13 11:26:36,091 | INFO     | overall cleanup function is called
[2025-10-13 07:27:32] 2025-10-13 11:26:37,100 | INFO     | --- collectZombieJob: --- 10, [20725]
[2025-10-13 07:27:32] 2025-10-13 11:26:37,100 | INFO     | zombie collector waiting for pid 20725
[2025-10-13 07:27:32] 2025-10-13 11:26:37,100 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 07:27:32] 2025-10-13 11:26:37,100 | INFO     | collected zombie processes
[2025-10-13 07:27:32] 2025-10-13 11:26:37,100 | INFO     | will attempt to kill all subprocesses of pid=20725
[2025-10-13 07:27:32] 2025-10-13 11:26:37,197 | INFO     | process IDs to be killed: [20725] (in reverse order)
[2025-10-13 07:27:32] 2025-10-13 11:26:37,261 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 07:27:32] 2025-10-13 11:26:37,261 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 07:27:32] 2025-10-13 11:26:37,266 | INFO     | did not find any defunct processes belonging to 20725
[2025-10-13 07:27:32] 2025-10-13 11:26:37,269 | INFO     | did not find any defunct processes belonging to 20725
[2025-10-13 07:27:32] 2025-10-13 11:26:37,269 | INFO     | ready for new job
[2025-10-13 07:27:32] 2025-10-13 11:26:37,269 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 07:27:32] 2025-10-13 11:26:37,271 | INFO     | ***************************************
[2025-10-13 07:27:32] 2025-10-13 11:26:37,271 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 07:27:32] 2025-10-13 11:26:37,271 | INFO     | ***************************************
[2025-10-13 07:27:32] 2025-10-13 11:26:37,271 | INFO     | 
[2025-10-13 07:27:32] 2025-10-13 11:26:37,272 | INFO     | architecture information:
[2025-10-13 07:27:32] 2025-10-13 11:26:37,273 | INFO     | executing command: cat /etc/os-release
[2025-10-13 07:27:32] 2025-10-13 11:26:37,293 | INFO     | cat /etc/os-release:
[2025-10-13 07:27:32] NAME="CentOS Linux"
[2025-10-13 07:27:32] VERSION="7 (Core)"
[2025-10-13 07:27:32] ID="centos"
[2025-10-13 07:27:32] ID_LIKE="rhel fedora"
[2025-10-13 07:27:32] VERSION_ID="7"
[2025-10-13 07:27:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 07:27:32] ANSI_COLOR="0;31"
[2025-10-13 07:27:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 07:27:32] HOME_URL="https://www.centos.org/"
[2025-10-13 07:27:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 07:27:32] 
[2025-10-13 07:27:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 07:27:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 07:27:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 07:27:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 07:27:32] 
[2025-10-13 07:27:32] 2025-10-13 11:26:37,294 | INFO     | ***************************************
[2025-10-13 07:27:32] 2025-10-13 11:26:37,797 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 07:27:32] 2025-10-13 11:26:37,820 | INFO     | sufficient remaining disk space (18581815296 B)
[2025-10-13 07:27:32] 2025-10-13 11:26:37,820 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 07:27:32] 2025-10-13 11:26:37,821 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 07:27:32] 2025-10-13 11:26:37,821 | INFO     | update_server=False
[2025-10-13 07:27:32] 2025-10-13 11:26:37,821 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 07:27:32] 2025-10-13 11:26:37,822 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:27:32] 2025-10-13 11:26:37,822 | INFO     | aborting loop
[2025-10-13 07:27:32] 2025-10-13 11:26:37,822 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 07:27:32] 2025-10-13 11:26:37,822 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:27:32] 2025-10-13 11:26:37,860 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 07:27:32] 2025-10-13 11:26:37,888 | INFO     | all data control threads have been joined
[2025-10-13 07:27:32] 2025-10-13 11:26:38,405 | INFO     | all payload control threads have been joined
[2025-10-13 07:27:32] 2025-10-13 11:26:38,614 | INFO     | all job control threads have been joined
[2025-10-13 07:27:32] 2025-10-13 11:26:38,827 | INFO     | [job] retrieve thread has finished
[2025-10-13 07:27:32] 2025-10-13 11:26:38,828 | INFO     | [job] job monitor thread has finished
[2025-10-13 07:27:32] 2025-10-13 11:26:38,828 | INFO     | [job] queue monitor thread has finished
[2025-10-13 07:27:32] 2025-10-13 11:26:38,896 | INFO     | [data] control thread has finished
[2025-10-13 07:27:32] 2025-10-13 11:26:39,248 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 07:27:32] 2025-10-13 11:26:39,325 | INFO     | [job] validate thread has finished
[2025-10-13 07:27:32] 2025-10-13 11:26:39,410 | INFO     | [payload] control thread has finished
[2025-10-13 07:27:32] 2025-10-13 11:26:39,620 | INFO     | [job] control thread has finished
[2025-10-13 07:27:32] 2025-10-13 11:26:39,758 | INFO     | [data] copytool_in thread has finished
[2025-10-13 07:27:32] 2025-10-13 11:26:39,760 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 07:27:32] 2025-10-13 11:26:39,828 | INFO     | [data] copytool_out thread has finished
[2025-10-13 07:27:32] 2025-10-13 11:26:39,964 | INFO     | [payload] failed_post thread has finished
[2025-10-13 07:27:32] 2025-10-13 11:26:39,968 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 07:27:32] 2025-10-13 11:26:40,251 | INFO     | [payload] validate_post thread has finished
[2025-10-13 07:27:32] 2025-10-13 11:26:41,862 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 07:27:32] 2025-10-13 11:26:47,903 | INFO     | job.realtimelogging is not enabled
[2025-10-13 07:27:32] 2025-10-13 11:26:48,908 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 07:27:32] 2025-10-13 11:27:07,769 | INFO     | PID=14212 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 07:27:32] 2025-10-13 11:27:07,770 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 07:27:32] 2025-10-13 11:27:07,771 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 07:27:32] 2025-10-13 11:27:07,771 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 07:27:32] 2025-10-13 11:27:26,096 | INFO     | [monitor] cgroup control has ended
[2025-10-13 07:27:32] 2025-10-13 11:27:27,387 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140131472365376)>', '<ExcThread(monitor, started 140130287351552)>']
[2025-10-13 07:27:32] 2025-10-13 11:27:27,852 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 07:27:32] 2025-10-13 11:27:27,853 | INFO     | [monitor] control thread has ended
[2025-10-13 07:27:32] 2025-10-13 11:27:32,403 | INFO     | all workflow threads have been joined
[2025-10-13 07:27:32] 2025-10-13 11:27:32,404 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 07:27:32] 2025-10-13 11:27:32,404 | INFO     | traces error code: 0
[2025-10-13 07:27:32] 2025-10-13 11:27:32,405 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 07:27:32] 2025-10-13 11:27:32,531 [wrapper] ==== pilot stdout END ====
[2025-10-13 07:27:32] 2025-10-13 11:27:32,536 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 07:27:32] 2025-10-13 11:27:32,541 [wrapper] pilotpid: 14212
[2025-10-13 07:27:32] 2025-10-13 11:27:32,547 [wrapper] Pilot exit status: 0
[2025-10-13 07:27:32] 2025-10-13 11:27:32,567 [wrapper] pandaids: 6841259075
[2025-10-13 07:27:32] 2025-10-13 11:27:32,623 [wrapper] cleanup supervisor_pilot 13711 14213
[2025-10-13 07:27:32] 2025-10-13 11:27:32,629 [wrapper] Test setup, not cleaning
[2025-10-13 07:27:32] 2025-10-13 11:27:32,634 [wrapper] apfmon messages muted
[2025-10-13 07:27:32] 2025-10-13 11:27:32,639 [wrapper] ==== wrapper stdout END ====
[2025-10-13 07:27:32] 2025-10-13 11:27:32,644 [wrapper] ==== wrapper stderr END ====
[2025-10-13 07:27:32]  *** Error codes and diagnostics ***
[2025-10-13 07:27:32]     "exeErrorCode": 0,
[2025-10-13 07:27:32]     "exeErrorDiag": "",
[2025-10-13 07:27:32]     "pilotErrorCode": 0,
[2025-10-13 07:27:32]     "pilotErrorDiag": "",
[2025-10-13 07:27:32]  *** Listing of results directory ***
[2025-10-13 07:27:32] total 410660
[2025-10-13 07:27:32] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 22:00 pilot3.tar.gz
[2025-10-13 07:27:32] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 22:23 queuedata.json
[2025-10-13 07:27:32] -rwx------ 1 boincer umatlas     36292 Oct 12 22:23 runpilot2-wrapper.sh
[2025-10-13 07:27:32] -rw-r--r-- 1 boincer umatlas       100 Oct 13 05:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 07:27:32] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 05:14 run_atlas
[2025-10-13 07:27:32] -rw-r--r-- 1 boincer umatlas       105 Oct 13 05:14 job.xml
[2025-10-13 07:27:32] -rw-r--r-- 2 boincer umatlas 222315236 Oct 13 05:14 EVNT.46676267._002434.pool.root.1
[2025-10-13 07:27:32] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 05:14 start_atlas.sh
[2025-10-13 07:27:32] drwxrwx--x 2 boincer umatlas      4096 Oct 13 05:14 shared
[2025-10-13 07:27:32] -rw-r--r-- 2 boincer umatlas    569686 Oct 13 05:14 input.tar.gz
[2025-10-13 07:27:32] -rw-r--r-- 1 boincer umatlas         0 Oct 13 05:14 boinc_lockfile
[2025-10-13 07:27:32] -rw-r--r-- 1 boincer umatlas      2550 Oct 13 05:14 pandaJob.out
[2025-10-13 07:27:32] -rw------- 1 boincer umatlas    972857 Oct 13 05:15 agis_schedconf.cvmfs.json
[2025-10-13 07:27:32] -rw------- 1 boincer umatlas   1560580 Oct 13 05:15 agis_ddmendpoints.agis.ALL.json
[2025-10-13 07:27:32] drwx------ 5 boincer umatlas      4096 Oct 13 05:15 pilot3
[2025-10-13 07:27:32] -rw-r--r-- 1 boincer umatlas      5910 Oct 13 07:21 init_data.xml
[2025-10-13 07:27:32] -rw------- 1 boincer umatlas 191308111 Oct 13 07:25 HITS.46676269._094967.pool.root.1
[2025-10-13 07:27:32] -rw-r--r-- 1 boincer umatlas       529 Oct 13 07:25 boinc_task_state.xml
[2025-10-13 07:27:32] -rw------- 1 boincer umatlas      1050 Oct 13 07:26 memory_monitor_summary.json
[2025-10-13 07:27:32] -rw------- 1 boincer umatlas    388449 Oct 13 07:26 log.46676269._094967.job.log.tgz.1
[2025-10-13 07:27:32] -rw------- 1 boincer umatlas      7851 Oct 13 07:26 heartbeat.json
[2025-10-13 07:27:32] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 07:27 boinc_mmap_file
[2025-10-13 07:27:32] -rw-r--r-- 1 boincer umatlas        27 Oct 13 07:27 wrapper_checkpoint.txt
[2025-10-13 07:27:32] -rw------- 1 boincer umatlas        95 Oct 13 07:27 pilot_heartbeat.json
[2025-10-13 07:27:32] -rw------- 1 boincer umatlas      4818 Oct 13 07:27 pilotlog.txt
[2025-10-13 07:27:32] -rw------- 1 boincer umatlas   1105380 Oct 13 07:27 log.46676269._094967.job.log.1
[2025-10-13 07:27:32] -rw------- 1 boincer umatlas       357 Oct 13 07:27 output.list
[2025-10-13 07:27:32] -rw-r--r-- 1 boincer umatlas       620 Oct 13 07:27 runtime_log
[2025-10-13 07:27:32] -rw------- 1 boincer umatlas   1515520 Oct 13 07:27 result.tar.gz
[2025-10-13 07:27:32] -rw-r--r-- 1 boincer umatlas      8703 Oct 13 07:27 runtime_log.err
[2025-10-13 07:27:32] -rw------- 1 boincer umatlas       660 Oct 13 07:27 b7FLDmGPNS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmNXVMDmQFuaFm.diag
[2025-10-13 07:27:32] -rw-r--r-- 1 boincer umatlas     20840 Oct 13 07:27 stderr.txt
[2025-10-13 07:27:32] HITS file was successfully produced:
[2025-10-13 07:27:32] -rw------- 1 boincer umatlas 191308111 Oct 13 07:25 shared/HITS.pool.root.1
[2025-10-13 07:27:32]  *** Contents of shared directory: ***
[2025-10-13 07:27:32] total 406000
[2025-10-13 07:27:32] -rw-r--r-- 2 boincer umatlas 222315236 Oct 13 05:14 ATLAS.root_0
[2025-10-13 07:27:32] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 05:14 start_atlas.sh
[2025-10-13 07:27:32] -rw-r--r-- 2 boincer umatlas    569686 Oct 13 05:14 input.tar.gz
[2025-10-13 07:27:32] -rw------- 1 boincer umatlas 191308111 Oct 13 07:25 HITS.pool.root.1
[2025-10-13 07:27:32] -rw------- 1 boincer umatlas   1515520 Oct 13 07:27 result.tar.gz
07:27:34 (10398): run_atlas exited; CPU time 57371.377464
07:27:34 (10398): called boinc_finish(0)

</stderr_txt>
]]>

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