Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:17:37 (22698): wrapper (7.7.26015): starting
05:17:37 (22698): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 05:17:37] Arguments: --nthreads 8
[2025-10-13 05:17:37] Threads: 8
[2025-10-13 05:17:37] Checking for CVMFS
[2025-10-13 05:17:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 05:17:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 05:17:37] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 05:17:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 05:17:37] 2.11.2.0 2934 113273 81840 151656 1 56 15808936 20275200 1 130560 1 51070798 99.986 3900241 21398 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 05:17:37] CVMFS is ok
[2025-10-13 05:17:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 05:17:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 05:17:37] Further information can be found at the LHC@home message board.
[2025-10-13 05:17:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 05:17:37] Checking for apptainer binary...
[2025-10-13 05:17:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 05:17:37] Running /usr/bin/apptainer --version
[2025-10-13 05:17:37] apptainer version 1.3.2-1.el7
[2025-10-13 05:17:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 05:17:39] c-204-33.aglt2.org
[2025-10-13 05:17:39] apptainer works
[2025-10-13 05:17:39] Set ATHENA_PROC_NUMBER=8
[2025-10-13 05:17:39] Set ATHENA_CORE_NUMBER=8
[2025-10-13 05:17:39] Starting ATLAS job with PandaID=6842605079
[2025-10-13 05:17:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 07:29:14]  *** The last 200 lines of the pilot log: ***
[2025-10-13 07:29:14] 2025-10-13 11:28:13,797 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 07:29:14] 2025-10-13 11:28:13,797 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 07:29:14] 2025-10-13 11:28:13,800 | INFO     | fitting pss+swap vs Time
[2025-10-13 07:29:14] 2025-10-13 11:28:13,800 | INFO     | sum of square deviations: 650252192.0
[2025-10-13 07:29:14] 2025-10-13 11:28:13,801 | INFO     | sum of deviations: -12540480802.5
[2025-10-13 07:29:14] 2025-10-13 11:28:13,801 | INFO     | mean x: 1760350980.5
[2025-10-13 07:29:14] 2025-10-13 11:28:13,801 | INFO     | mean y: 2534371.0546875
[2025-10-13 07:29:14] 2025-10-13 11:28:13,801 | INFO     | -- intersect: 33951897323.17881
[2025-10-13 07:29:14] 2025-10-13 11:28:13,801 | INFO     | intersect: 33951897323.17881
[2025-10-13 07:29:14] 2025-10-13 11:28:13,801 | INFO     | chi2: 2.508079134099585
[2025-10-13 07:29:14] 2025-10-13 11:28:13,802 | INFO     | sum of square deviations: 576985702.0
[2025-10-13 07:29:14] 2025-10-13 11:28:13,802 | INFO     | sum of deviations: -2683133982.9999943
[2025-10-13 07:29:14] 2025-10-13 11:28:13,802 | INFO     | mean x: 1760350828.0
[2025-10-13 07:29:14] 2025-10-13 11:28:13,803 | INFO     | mean y: 2554307.886178862
[2025-10-13 07:29:14] 2025-10-13 11:28:13,803 | INFO     | -- intersect: 8188644729.601651
[2025-10-13 07:29:14] 2025-10-13 11:28:13,803 | INFO     | intersect: 8188644729.601651
[2025-10-13 07:29:14] 2025-10-13 11:28:13,803 | INFO     | chi2: 1.6674678319969372
[2025-10-13 07:29:14] 2025-10-13 11:28:13,803 | INFO     | current chi2=1.6674678319969372 (change=33.51613952980125 %)
[2025-10-13 07:29:14] 2025-10-13 11:28:13,803 | INFO     | sum of square deviations: 509440249.5
[2025-10-13 07:29:14] 2025-10-13 11:28:13,804 | INFO     | sum of deviations: -1835850052.4999983
[2025-10-13 07:29:14] 2025-10-13 11:28:13,804 | INFO     | mean x: 1760350675.5
[2025-10-13 07:29:14] 2025-10-13 11:28:13,804 | INFO     | mean y: 2556221.9576271186
[2025-10-13 07:29:14] 2025-10-13 11:28:13,804 | INFO     | -- intersect: 6346263620.827144
[2025-10-13 07:29:14] 2025-10-13 11:28:13,805 | INFO     | intersect: 6346263620.827144
[2025-10-13 07:29:14] 2025-10-13 11:28:13,805 | INFO     | chi2: 1.6695075675316582
[2025-10-13 07:29:14] 2025-10-13 11:28:13,805 | INFO     | current chi2=1.6695075675316582 (change=-0.1223253303950261 %)
[2025-10-13 07:29:14] 2025-10-13 11:28:13,805 | INFO     | right removable region: 117
[2025-10-13 07:29:14] 2025-10-13 11:28:13,805 | INFO     | sum of square deviations: 576985702.0
[2025-10-13 07:29:14] 2025-10-13 11:28:13,806 | INFO     | sum of deviations: -31676344740.0
[2025-10-13 07:29:14] 2025-10-13 11:28:13,806 | INFO     | mean x: 1760351133.0
[2025-10-13 07:29:14] 2025-10-13 11:28:13,806 | INFO     | mean y: 2573484.8211382115
[2025-10-13 07:29:14] 2025-10-13 11:28:13,806 | INFO     | -- intersect: 96645331111.34824
[2025-10-13 07:29:14] 2025-10-13 11:28:13,806 | INFO     | intersect: 96645331111.34824
[2025-10-13 07:29:14] 2025-10-13 11:28:13,807 | INFO     | chi2: 1.0538268362672465
[2025-10-13 07:29:14] 2025-10-13 11:28:13,807 | INFO     | current chi2=1.0538268362672465 (change=57.982711871426794 %)
[2025-10-13 07:29:14] 2025-10-13 11:28:13,807 | INFO     | sum of square deviations: 509440249.5
[2025-10-13 07:29:14] 2025-10-13 11:28:13,808 | INFO     | sum of deviations: -33524959957.5
[2025-10-13 07:29:14] 2025-10-13 11:28:13,808 | INFO     | mean x: 1760351285.5
[2025-10-13 07:29:14] 2025-10-13 11:28:13,808 | INFO     | mean y: 2577584.7881355933
[2025-10-13 07:29:14] 2025-10-13 11:28:13,808 | INFO     | -- intersect: 115846793693.43535
[2025-10-13 07:29:14] 2025-10-13 11:28:13,808 | INFO     | intersect: 115846793693.43535
[2025-10-13 07:29:14] 2025-10-13 11:28:13,808 | INFO     | chi2: 0.9963841623858498
[2025-10-13 07:29:14] 2025-10-13 11:28:13,809 | INFO     | current chi2=0.9963841623858498 (change=5.450864592219346 %)
[2025-10-13 07:29:14] 2025-10-13 11:28:13,809 | INFO     | left removable region: 20
[2025-10-13 07:29:14] 2025-10-13 11:28:13,809 | INFO     | sum of square deviations: 282974608.0
[2025-10-13 07:29:14] 2025-10-13 11:28:13,809 | INFO     | sum of deviations: -17057590552.0
[2025-10-13 07:29:14] 2025-10-13 11:28:13,809 | INFO     | mean x: 1760351255.0
[2025-10-13 07:29:14] 2025-10-13 11:28:13,810 | INFO     | mean y: 2591488.288659794
[2025-10-13 07:29:14] 2025-10-13 11:28:13,810 | INFO     | -- intersect: 106115825985.60208
[2025-10-13 07:29:14] 2025-10-13 11:28:13,810 | INFO     | intersect: 106115825985.60208
[2025-10-13 07:29:14] 2025-10-13 11:28:13,810 | INFO     | chi2: 0.09938419678944094
[2025-10-13 07:29:14] 2025-10-13 11:28:13,810 | INFO     | -- intersect: 106115825985.60208
[2025-10-13 07:29:14] 2025-10-13 11:28:13,810 | INFO     | current memory leak: -60.28 B/s (using 97 data points, chi2=0.10)
[2025-10-13 07:29:14] 2025-10-13 11:28:13,811 | INFO     | could have reported an average CPU frequency of 1993 MHz (8 samples)
[2025-10-13 07:29:14] 2025-10-13 11:28:13,811 | INFO     | ..............................
[2025-10-13 07:29:14] 2025-10-13 11:28:13,811 | INFO     | . Timing measurements:
[2025-10-13 07:29:14] 2025-10-13 11:28:13,811 | INFO     | . get job = 0 s
[2025-10-13 07:29:14] 2025-10-13 11:28:13,811 | INFO     | . initial setup = 2 s
[2025-10-13 07:29:14] 2025-10-13 11:28:13,811 | INFO     | . payload setup = 8 s
[2025-10-13 07:29:14] 2025-10-13 11:28:13,811 | INFO     | . stage-in = 0 s
[2025-10-13 07:29:14] 2025-10-13 11:28:13,812 | INFO     | . payload execution = 7776 s
[2025-10-13 07:29:14] 2025-10-13 11:28:13,812 | INFO     | . stage-out = 0 s
[2025-10-13 07:29:14] 2025-10-13 11:28:13,812 | INFO     | . log creation = 0 s
[2025-10-13 07:29:14] 2025-10-13 11:28:13,812 | INFO     | ..............................
[2025-10-13 07:29:14] 2025-10-13 11:28:13,904 | INFO     | 
[2025-10-13 07:29:14] 2025-10-13 11:28:13,904 | INFO     | job summary report
[2025-10-13 07:29:14] 2025-10-13 11:28:13,904 | INFO     | --------------------------------------------------
[2025-10-13 07:29:14] 2025-10-13 11:28:13,905 | INFO     | PanDA job id: 6842605079
[2025-10-13 07:29:14] 2025-10-13 11:28:13,905 | INFO     | task id: 46676269
[2025-10-13 07:29:14] 2025-10-13 11:28:13,905 | INFO     | errors: (none)
[2025-10-13 07:29:14] 2025-10-13 11:28:13,905 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 07:29:14] 2025-10-13 11:28:13,905 | INFO     | pilot state: finished 
[2025-10-13 07:29:14] 2025-10-13 11:28:13,905 | INFO     | transexitcode: 0
[2025-10-13 07:29:14] 2025-10-13 11:28:13,905 | INFO     | exeerrorcode: 0
[2025-10-13 07:29:14] 2025-10-13 11:28:13,905 | INFO     | exeerrordiag: 
[2025-10-13 07:29:14] 2025-10-13 11:28:13,905 | INFO     | exitcode: 0
[2025-10-13 07:29:14] 2025-10-13 11:28:13,906 | INFO     | exitmsg: OK
[2025-10-13 07:29:14] 2025-10-13 11:28:13,906 | INFO     | cpuconsumptiontime: 56244 s
[2025-10-13 07:29:14] 2025-10-13 11:28:13,906 | INFO     | nevents: 400
[2025-10-13 07:29:14] 2025-10-13 11:28:13,906 | INFO     | neventsw: 0
[2025-10-13 07:29:14] 2025-10-13 11:28:13,906 | INFO     | pid: 537
[2025-10-13 07:29:14] 2025-10-13 11:28:13,906 | INFO     | pgrp: 537
[2025-10-13 07:29:14] 2025-10-13 11:28:13,906 | INFO     | corecount: 8
[2025-10-13 07:29:14] 2025-10-13 11:28:13,906 | INFO     | event service: False
[2025-10-13 07:29:14] 2025-10-13 11:28:13,907 | INFO     | sizes: {0: 2348756, 6: 2349018, 11: 2349046, 7789: 2376674, 7790: 2385672, 7793: 2385728, 7801: 2386050}
[2025-10-13 07:29:14] 2025-10-13 11:28:13,907 | INFO     | --------------------------------------------------
[2025-10-13 07:29:14] 2025-10-13 11:28:13,907 | INFO     | 
[2025-10-13 07:29:14] 2025-10-13 11:28:13,907 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 07:29:14] 2025-10-13 11:28:13,935 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 07:29:14] 2025-10-13 11:28:13,935 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 07:29:14] 2025-10-13 11:28:13,935 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 07:29:14] 2025-10-13 11:28:13,936 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 07:29:14] 2025-10-13 11:28:13,936 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 07:29:14] 2025-10-13 11:28:13,936 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 07:29:14] 2025-10-13 11:28:13,936 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 07:29:14] 2025-10-13 11:28:13,936 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 07:29:14] 2025-10-13 11:28:13,936 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 07:29:14] 2025-10-13 11:28:13,937 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 07:29:14] 2025-10-13 11:28:13,937 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 07:29:14] 2025-10-13 11:28:13,937 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 07:29:14] 2025-10-13 11:28:13,937 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 07:29:14] 2025-10-13 11:28:13,937 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 07:29:14] 2025-10-13 11:28:13,938 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 07:29:14] 2025-10-13 11:28:13,938 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 07:29:14] 2025-10-13 11:28:13,938 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 07:29:14] 2025-10-13 11:28:13,938 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 07:29:14] 2025-10-13 11:28:13,938 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 07:29:14] 2025-10-13 11:28:13,938 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 07:29:14] 2025-10-13 11:28:13,939 | INFO     | job 6842605079 has completed (purged errors)
[2025-10-13 07:29:14] 2025-10-13 11:28:13,939 | INFO     | overall cleanup function is called
[2025-10-13 07:29:14] 2025-10-13 11:28:14,947 | INFO     | --- collectZombieJob: --- 10, [537]
[2025-10-13 07:29:14] 2025-10-13 11:28:14,947 | INFO     | zombie collector waiting for pid 537
[2025-10-13 07:29:14] 2025-10-13 11:28:14,948 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 07:29:14] 2025-10-13 11:28:14,948 | INFO     | collected zombie processes
[2025-10-13 07:29:14] 2025-10-13 11:28:14,948 | INFO     | will attempt to kill all subprocesses of pid=537
[2025-10-13 07:29:14] 2025-10-13 11:28:15,037 | INFO     | process IDs to be killed: [537] (in reverse order)
[2025-10-13 07:29:14] 2025-10-13 11:28:15,122 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 07:29:14] 2025-10-13 11:28:15,123 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 07:29:14] 2025-10-13 11:28:15,127 | INFO     | did not find any defunct processes belonging to 537
[2025-10-13 07:29:14] 2025-10-13 11:28:15,130 | INFO     | did not find any defunct processes belonging to 537
[2025-10-13 07:29:14] 2025-10-13 11:28:15,130 | INFO     | ready for new job
[2025-10-13 07:29:14] 2025-10-13 11:28:15,130 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 07:29:14] 2025-10-13 11:28:15,132 | INFO     | ***************************************
[2025-10-13 07:29:14] 2025-10-13 11:28:15,132 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 07:29:14] 2025-10-13 11:28:15,133 | INFO     | ***************************************
[2025-10-13 07:29:14] 2025-10-13 11:28:15,133 | INFO     | 
[2025-10-13 07:29:14] 2025-10-13 11:28:15,133 | INFO     | architecture information:
[2025-10-13 07:29:14] 2025-10-13 11:28:15,134 | INFO     | executing command: cat /etc/os-release
[2025-10-13 07:29:14] 2025-10-13 11:28:15,151 | INFO     | cat /etc/os-release:
[2025-10-13 07:29:14] NAME="CentOS Linux"
[2025-10-13 07:29:14] VERSION="7 (Core)"
[2025-10-13 07:29:14] ID="centos"
[2025-10-13 07:29:14] ID_LIKE="rhel fedora"
[2025-10-13 07:29:14] VERSION_ID="7"
[2025-10-13 07:29:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 07:29:14] ANSI_COLOR="0;31"
[2025-10-13 07:29:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 07:29:14] HOME_URL="https://www.centos.org/"
[2025-10-13 07:29:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 07:29:14] 
[2025-10-13 07:29:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 07:29:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 07:29:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 07:29:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 07:29:14] 
[2025-10-13 07:29:14] 2025-10-13 11:28:15,152 | INFO     | ***************************************
[2025-10-13 07:29:14] 2025-10-13 11:28:15,653 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 07:29:14] 2025-10-13 11:28:15,673 | INFO     | sufficient remaining disk space (18583912448 B)
[2025-10-13 07:29:14] 2025-10-13 11:28:15,673 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 07:29:14] 2025-10-13 11:28:15,673 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 07:29:14] 2025-10-13 11:28:15,674 | INFO     | update_server=False
[2025-10-13 07:29:14] 2025-10-13 11:28:15,674 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 07:29:14] 2025-10-13 11:28:15,674 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:29:14] 2025-10-13 11:28:15,751 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 07:29:14] 2025-10-13 11:28:15,981 | INFO     | all data control threads have been joined
[2025-10-13 07:29:14] 2025-10-13 11:28:16,077 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 07:29:14] 2025-10-13 11:28:16,077 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 07:29:14] 2025-10-13 11:28:16,077 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:29:14] 2025-10-13 11:28:16,077 | INFO     | will abort loop
[2025-10-13 07:29:14] 2025-10-13 11:28:16,219 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 07:29:14] 2025-10-13 11:28:16,265 | INFO     | all payload control threads have been joined
[2025-10-13 07:29:14] 2025-10-13 11:28:16,269 | INFO     | all job control threads have been joined
[2025-10-13 07:29:14] 2025-10-13 11:28:16,679 | INFO     | [job] retrieve thread has finished
[2025-10-13 07:29:14] 2025-10-13 11:28:16,680 | INFO     | [job] queue monitor thread has finished
[2025-10-13 07:29:14] 2025-10-13 11:28:16,957 | INFO     | [data] copytool_in thread has finished
[2025-10-13 07:29:14] 2025-10-13 11:28:16,958 | INFO     | [job] validate thread has finished
[2025-10-13 07:29:14] 2025-10-13 11:28:16,987 | INFO     | [data] control thread has finished
[2025-10-13 07:29:14] 2025-10-13 11:28:17,083 | INFO     | [job] job monitor thread has finished
[2025-10-13 07:29:14] 2025-10-13 11:28:17,149 | INFO     | [payload] validate_post thread has finished
[2025-10-13 07:29:14] 2025-10-13 11:28:17,270 | INFO     | [payload] control thread has finished
[2025-10-13 07:29:14] 2025-10-13 11:28:17,275 | INFO     | [job] control thread has finished
[2025-10-13 07:29:14] 2025-10-13 11:28:17,339 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 07:29:14] 2025-10-13 11:28:17,393 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 07:29:14] 2025-10-13 11:28:17,431 | INFO     | [payload] failed_post thread has finished
[2025-10-13 07:29:14] 2025-10-13 11:28:17,663 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 07:29:14] 2025-10-13 11:28:17,757 | INFO     | [data] copytool_out thread has finished
[2025-10-13 07:29:14] 2025-10-13 11:28:17,888 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 07:29:14] 2025-10-13 11:28:20,223 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 07:29:14] 2025-10-13 11:28:46,750 | INFO     | PID=26362 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 07:29:14] 2025-10-13 11:28:46,751 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 07:29:14] 2025-10-13 11:28:46,751 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 07:29:14] 2025-10-13 11:28:46,751 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 07:29:14] 2025-10-13 11:29:08,554 | INFO     | [monitor] cgroup control has ended
[2025-10-13 07:29:14] 2025-10-13 11:29:09,281 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140279481079616)>', '<ExcThread(monitor, started 140278555977472)>']
[2025-10-13 07:29:14] 2025-10-13 11:29:09,852 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 07:29:14] 2025-10-13 11:29:09,853 | INFO     | [monitor] control thread has ended
[2025-10-13 07:29:14] 2025-10-13 11:29:14,295 | INFO     | all workflow threads have been joined
[2025-10-13 07:29:14] 2025-10-13 11:29:14,295 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 07:29:14] 2025-10-13 11:29:14,296 | INFO     | traces error code: 0
[2025-10-13 07:29:14] 2025-10-13 11:29:14,296 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 07:29:14] 2025-10-13 11:29:14,412 [wrapper] ==== pilot stdout END ====
[2025-10-13 07:29:14] 2025-10-13 11:29:14,417 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 07:29:14] 2025-10-13 11:29:14,421 [wrapper] pilotpid: 26362
[2025-10-13 07:29:14] 2025-10-13 11:29:14,426 [wrapper] Pilot exit status: 0
[2025-10-13 07:29:14] 2025-10-13 11:29:14,444 [wrapper] pandaids: 6842605079
[2025-10-13 07:29:14] 2025-10-13 11:29:14,492 [wrapper] cleanup supervisor_pilot 27349 26363
[2025-10-13 07:29:14] 2025-10-13 11:29:14,496 [wrapper] Test setup, not cleaning
[2025-10-13 07:29:14] 2025-10-13 11:29:14,501 [wrapper] apfmon messages muted
[2025-10-13 07:29:14] 2025-10-13 11:29:14,505 [wrapper] ==== wrapper stdout END ====
[2025-10-13 07:29:14] 2025-10-13 11:29:14,509 [wrapper] ==== wrapper stderr END ====
[2025-10-13 07:29:14]  *** Error codes and diagnostics ***
[2025-10-13 07:29:14]     "exeErrorCode": 0,
[2025-10-13 07:29:14]     "exeErrorDiag": "",
[2025-10-13 07:29:14]     "pilotErrorCode": 0,
[2025-10-13 07:29:14]     "pilotErrorDiag": "",
[2025-10-13 07:29:14]  *** Listing of results directory ***
[2025-10-13 07:29:14] total 412532
[2025-10-13 07:29:14] -rw-r--r-- 1 boincer umatlas    557409 Oct 13 01:28 pilot3.tar.gz
[2025-10-13 07:29:14] -rw-r--r-- 1 boincer umatlas      5112 Oct 13 01:33 queuedata.json
[2025-10-13 07:29:14] -rwx------ 1 boincer umatlas     36292 Oct 13 01:34 runpilot2-wrapper.sh
[2025-10-13 07:29:14] -rw-r--r-- 1 boincer umatlas       100 Oct 13 05:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 07:29:14] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 05:17 run_atlas
[2025-10-13 07:29:14] -rw-r--r-- 1 boincer umatlas       105 Oct 13 05:17 job.xml
[2025-10-13 07:29:14] -rw-r--r-- 2 boincer umatlas 224559553 Oct 13 05:17 EVNT.46676267._004839.pool.root.1
[2025-10-13 07:29:14] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 05:17 start_atlas.sh
[2025-10-13 07:29:14] drwxrwx--x 2 boincer umatlas      4096 Oct 13 05:17 shared
[2025-10-13 07:29:14] -rw-r--r-- 2 boincer umatlas    569685 Oct 13 05:17 input.tar.gz
[2025-10-13 07:29:14] -rw-r--r-- 1 boincer umatlas         0 Oct 13 05:17 boinc_lockfile
[2025-10-13 07:29:14] -rw-r--r-- 1 boincer umatlas      2549 Oct 13 05:17 pandaJob.out
[2025-10-13 07:29:14] -rw------- 1 boincer umatlas    972849 Oct 13 05:17 agis_schedconf.cvmfs.json
[2025-10-13 07:29:14] -rw------- 1 boincer umatlas   1560580 Oct 13 05:17 agis_ddmendpoints.agis.ALL.json
[2025-10-13 07:29:14] drwx------ 5 boincer umatlas      4096 Oct 13 05:17 pilot3
[2025-10-13 07:29:14] -rw------- 1 boincer umatlas 191062959 Oct 13 07:27 HITS.46676269._096356.pool.root.1
[2025-10-13 07:29:14] -rw-r--r-- 1 boincer umatlas      5910 Oct 13 07:27 init_data.xml
[2025-10-13 07:29:14] -rw-r--r-- 1 boincer umatlas       529 Oct 13 07:27 boinc_task_state.xml
[2025-10-13 07:29:14] -rw------- 1 boincer umatlas      1051 Oct 13 07:27 memory_monitor_summary.json
[2025-10-13 07:29:14] -rw------- 1 boincer umatlas    362215 Oct 13 07:28 log.46676269._096356.job.log.tgz.1
[2025-10-13 07:29:14] -rw------- 1 boincer umatlas      7850 Oct 13 07:28 heartbeat.json
[2025-10-13 07:29:14] -rw------- 1 boincer umatlas        95 Oct 13 07:28 pilot_heartbeat.json
[2025-10-13 07:29:14] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 07:29 boinc_mmap_file
[2025-10-13 07:29:14] -rw-r--r-- 1 boincer umatlas        27 Oct 13 07:29 wrapper_checkpoint.txt
[2025-10-13 07:29:14] -rw------- 1 boincer umatlas      4932 Oct 13 07:29 pilotlog.txt
[2025-10-13 07:29:14] -rw------- 1 boincer umatlas   1097384 Oct 13 07:29 log.46676269._096356.job.log.1
[2025-10-13 07:29:14] -rw------- 1 boincer umatlas       357 Oct 13 07:29 output.list
[2025-10-13 07:29:14] -rw-r--r-- 1 boincer umatlas       620 Oct 13 07:29 runtime_log
[2025-10-13 07:29:14] -rw------- 1 boincer umatlas   1474560 Oct 13 07:29 result.tar.gz
[2025-10-13 07:29:14] -rw-r--r-- 1 boincer umatlas      8703 Oct 13 07:29 runtime_log.err
[2025-10-13 07:29:14] -rw------- 1 boincer umatlas       659 Oct 13 07:29 gGkMDmpNQS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmghVMDm6XZ2Dm.diag
[2025-10-13 07:29:14] -rw-r--r-- 1 boincer umatlas     20855 Oct 13 07:29 stderr.txt
[2025-10-13 07:29:14] HITS file was successfully produced:
[2025-10-13 07:29:14] -rw------- 1 boincer umatlas 191062959 Oct 13 07:27 shared/HITS.pool.root.1
[2025-10-13 07:29:14]  *** Contents of shared directory: ***
[2025-10-13 07:29:14] total 407904
[2025-10-13 07:29:14] -rw-r--r-- 2 boincer umatlas 224559553 Oct 13 05:17 ATLAS.root_0
[2025-10-13 07:29:14] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 05:17 start_atlas.sh
[2025-10-13 07:29:14] -rw-r--r-- 2 boincer umatlas    569685 Oct 13 05:17 input.tar.gz
[2025-10-13 07:29:14] -rw------- 1 boincer umatlas 191062959 Oct 13 07:27 HITS.pool.root.1
[2025-10-13 07:29:14] -rw------- 1 boincer umatlas   1474560 Oct 13 07:29 result.tar.gz
07:29:16 (22698): run_atlas exited; CPU time 56185.272495
07:29:16 (22698): called boinc_finish(0)

</stderr_txt>
]]>

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