Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
18:48:21 (2621): wrapper (7.7.26015): starting
18:48:21 (2621): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 18:48:21] Arguments: --nthreads 12
[2025-10-13 18:48:21] Threads: 12
[2025-10-13 18:48:21] Checking for CVMFS
[2025-10-13 18:48:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 18:48:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 18:48:21] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 18:48:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 18:48:21] 2.13.0.0 14849 29 49796 151667 2 188 4088453 4096000 0 130560 0 55634 99.998 1296 651 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://128.142.248.156:3125 1
[2025-10-13 18:48:21] CVMFS is ok
[2025-10-13 18:48:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 18:48:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 18:48:21] Further information can be found at the LHC@home message board.
[2025-10-13 18:48:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 18:48:21] Checking for apptainer binary...
[2025-10-13 18:48:21] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin)
[2025-10-13 18:48:21] apptainer is not installed, using version from CVMFS
[2025-10-13 18:48:21] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 18:48:21] dagobert
[2025-10-13 18:48:21] apptainer works
[2025-10-13 18:48:21] Set ATHENA_PROC_NUMBER=12
[2025-10-13 18:48:21] Set ATHENA_CORE_NUMBER=12
[2025-10-13 18:48:21] Starting ATLAS job with PandaID=6841954488
[2025-10-13 18:48:21] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 19:17:52]  *** The last 200 lines of the pilot log: ***
[2025-10-13 19:17:52]  status=None
[2025-10-13 19:17:52]  status_code=0
[2025-10-13 19:17:52]  storage_token=
[2025-10-13 19:17:52]  surl=/var/lib/boinc/slots/12/PanDA_Pilot-6841954488/log.46676269._095653.job.log.tgz.1
[2025-10-13 19:17:52]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/21/c0/log.46676269._095653.job.log.tgz.1
[2025-10-13 19:17:52]  workdir=None
[2025-10-13 19:17:52] ]
[2025-10-13 19:17:52] 2025-10-13 17:17:11,314 | INFO     | transferring file log.46676269._095653.job.log.tgz.1 from /var/lib/boinc/slots/12/PanDA_Pilot-6841954488/log.46676269._095653.job.log.tgz.1 to /var/lib/boinc/slots
[2025-10-13 19:17:52] 2025-10-13 17:17:11,314 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/12/PanDA_Pilot-6841954488/log.46676269._095653.job.log.tgz.1 /var/lib/boinc/slots/12/log.46676269._095653.j
[2025-10-13 19:17:52] 2025-10-13 17:17:11,322 | INFO     | adding to output.list: log.46676269._095653.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/21/c0/log.46676269._095653.job.log.tg
[2025-10-13 19:17:52] 2025-10-13 17:17:11,322 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 19:17:52] 2025-10-13 17:17:11,322 | INFO     | summary of transferred files:
[2025-10-13 19:17:52] 2025-10-13 17:17:11,322 | INFO     |  -- lfn=log.46676269._095653.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 19:17:52] 2025-10-13 17:17:11,322 | INFO     | stage-out finished correctly
[2025-10-13 19:17:52] 2025-10-13 17:17:11,495 | INFO     | time since job start (1726s) is within the limit (172800.0s)
[2025-10-13 19:17:52] 2025-10-13 17:17:12,552 | WARNING  | process 13068 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 19:17:52] 2025-10-13 17:17:12,552 | INFO     | using path: /var/lib/boinc/slots/12/PanDA_Pilot-6841954488/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 19:17:52] 2025-10-13 17:17:12,573 | INFO     | number of running child processes to parent process 13068: 1
[2025-10-13 19:17:52] 2025-10-13 17:17:12,573 | INFO     | maximum number of monitored processes: 6
[2025-10-13 19:17:52] 2025-10-13 17:17:13,269 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 19:17:52] 2025-10-13 17:17:13,501 | INFO     | time since job start (1728s) is within the limit (172800.0s)
[2025-10-13 19:17:52] 2025-10-13 17:17:15,075 | INFO     | monitor loop #134: job 0:6841954488 is in state 'finished'
[2025-10-13 19:17:52] 2025-10-13 17:17:15,076 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 19:17:52] 2025-10-13 17:17:15,319 | INFO     | job 6841954488 has state=finished
[2025-10-13 19:17:52] 2025-10-13 17:17:15,319 | INFO     | preparing for final server update for job 6841954488 in state='finished'
[2025-10-13 19:17:52] 2025-10-13 17:17:15,319 | INFO     | this job has now completed (state=finished)
[2025-10-13 19:17:52] 2025-10-13 17:17:15,319 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 19:17:52] 2025-10-13 17:17:15,319 | INFO     | log transfer has been attempted: DONE
[2025-10-13 19:17:52] 2025-10-13 17:17:15,319 | INFO     | job 6841954488 has finished - writing final server update
[2025-10-13 19:17:52] 2025-10-13 17:17:15,319 | INFO     | total number of processed events: 400 (read)
[2025-10-13 19:17:52] 2025-10-13 17:17:15,320 | INFO     | executing command: lscpu
[2025-10-13 19:17:52] 2025-10-13 17:17:15,332 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 19:17:52] 2025-10-13 17:17:15,507 | INFO     | time since job start (1730s) is within the limit (172800.0s)
[2025-10-13 19:17:52] 2025-10-13 17:17:17,512 | INFO     | time since job start (1732s) is within the limit (172800.0s)
[2025-10-13 19:17:52] 2025-10-13 17:17:17,576 | INFO     | monitor loop #135: job 0:6841954488 is in state 'finished'
[2025-10-13 19:17:52] 2025-10-13 17:17:17,576 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 19:17:52] 2025-10-13 17:17:19,516 | INFO     | time since job start (1734s) is within the limit (172800.0s)
[2025-10-13 19:17:52] 2025-10-13 17:17:20,024 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-13 19:17:52] 2025-10-13 17:17:20,025 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3190.3196666666668
[2025-10-13 19:17:52] 2025-10-13 17:17:20,027 | INFO     | using path: /var/lib/boinc/slots/12/PanDA_Pilot-6841954488/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 19:17:52] 2025-10-13 17:17:20,027 | INFO     | extracted standard info from prmon json
[2025-10-13 19:17:52] 2025-10-13 17:17:20,027 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 19:17:52] 2025-10-13 17:17:20,027 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 19:17:52] 2025-10-13 17:17:20,027 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 19:17:52] 2025-10-13 17:17:20,027 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 19:17:52] 2025-10-13 17:17:20,028 | INFO     | fitting pss+swap vs Time
[2025-10-13 19:17:52] 2025-10-13 17:17:20,028 | INFO     | sum of square deviations: 2865170.0
[2025-10-13 19:17:52] 2025-10-13 17:17:20,028 | INFO     | sum of deviations: 131501848.0
[2025-10-13 19:17:52] 2025-10-13 17:17:20,028 | INFO     | mean x: 1760375036.0
[2025-10-13 19:17:52] 2025-10-13 17:17:20,028 | INFO     | mean y: 3179114.8571428573
[2025-10-13 19:17:52] 2025-10-13 17:17:20,028 | INFO     | -- intersect: -80792225837.40277
[2025-10-13 19:17:52] 2025-10-13 17:17:20,028 | INFO     | intersect: -80792225837.40277
[2025-10-13 19:17:52] 2025-10-13 17:17:20,028 | INFO     | chi2: 7.786468823438037e-05
[2025-10-13 19:17:52] 2025-10-13 17:17:20,028 | INFO     | -- intersect: -80792225837.40277
[2025-10-13 19:17:52] 2025-10-13 17:17:20,028 | INFO     | current memory leak: 45.90 B/s (using 21 data points, chi2=0.00)
[2025-10-13 19:17:52] 2025-10-13 17:17:20,028 | INFO     | could have reported an average CPU frequency of 3461 MHz (4 samples)
[2025-10-13 19:17:52] 2025-10-13 17:17:20,028 | INFO     | ..............................
[2025-10-13 19:17:52] 2025-10-13 17:17:20,028 | INFO     | . Timing measurements:
[2025-10-13 19:17:52] 2025-10-13 17:17:20,028 | INFO     | . get job = 0 s
[2025-10-13 19:17:52] 2025-10-13 17:17:20,029 | INFO     | . initial setup = 1 s
[2025-10-13 19:17:52] 2025-10-13 17:17:20,029 | INFO     | . payload setup = 1 s
[2025-10-13 19:17:52] 2025-10-13 17:17:20,029 | INFO     | . stage-in = 0 s
[2025-10-13 19:17:52] 2025-10-13 17:17:20,029 | INFO     | . payload execution = 1707 s
[2025-10-13 19:17:52] 2025-10-13 17:17:20,029 | INFO     | . stage-out = 0 s
[2025-10-13 19:17:52] 2025-10-13 17:17:20,029 | INFO     | . log creation = 0 s
[2025-10-13 19:17:52] 2025-10-13 17:17:20,029 | INFO     | ..............................
[2025-10-13 19:17:52] 2025-10-13 17:17:20,053 | INFO     | 
[2025-10-13 19:17:52] 2025-10-13 17:17:20,053 | INFO     | job summary report
[2025-10-13 19:17:52] 2025-10-13 17:17:20,053 | INFO     | --------------------------------------------------
[2025-10-13 19:17:52] 2025-10-13 17:17:20,053 | INFO     | PanDA job id: 6841954488
[2025-10-13 19:17:52] 2025-10-13 17:17:20,053 | INFO     | task id: 46676269
[2025-10-13 19:17:52] 2025-10-13 17:17:20,053 | INFO     | errors: (none)
[2025-10-13 19:17:52] 2025-10-13 17:17:20,053 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 19:17:52] 2025-10-13 17:17:20,053 | INFO     | pilot state: finished 
[2025-10-13 19:17:52] 2025-10-13 17:17:20,053 | INFO     | transexitcode: 0
[2025-10-13 19:17:52] 2025-10-13 17:17:20,053 | INFO     | exeerrorcode: 0
[2025-10-13 19:17:52] 2025-10-13 17:17:20,053 | INFO     | exeerrordiag: 
[2025-10-13 19:17:52] 2025-10-13 17:17:20,053 | INFO     | exitcode: 0
[2025-10-13 19:17:52] 2025-10-13 17:17:20,053 | INFO     | exitmsg: OK
[2025-10-13 19:17:52] 2025-10-13 17:17:20,053 | INFO     | cpuconsumptiontime: 18593 s
[2025-10-13 19:17:52] 2025-10-13 17:17:20,053 | INFO     | nevents: 400
[2025-10-13 19:17:52] 2025-10-13 17:17:20,053 | INFO     | neventsw: 0
[2025-10-13 19:17:52] 2025-10-13 17:17:20,053 | INFO     | pid: 13068
[2025-10-13 19:17:52] 2025-10-13 17:17:20,053 | INFO     | pgrp: 13068
[2025-10-13 19:17:52] 2025-10-13 17:17:20,053 | INFO     | corecount: 12
[2025-10-13 19:17:52] 2025-10-13 17:17:20,053 | INFO     | event service: False
[2025-10-13 19:17:52] 2025-10-13 17:17:20,053 | INFO     | sizes: {0: 2348808, 1: 2349070, 10: 2349098, 1712: 2373951, 1713: 2382951, 1715: 2383007, 1722: 2383329}
[2025-10-13 19:17:52] 2025-10-13 17:17:20,053 | INFO     | --------------------------------------------------
[2025-10-13 19:17:52] 2025-10-13 17:17:20,053 | INFO     | 
[2025-10-13 19:17:52] 2025-10-13 17:17:20,053 | INFO     | executing command: ls -lF /var/lib/boinc/slots/12
[2025-10-13 19:17:52] 2025-10-13 17:17:20,063 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 19:17:52] 2025-10-13 17:17:20,063 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 19:17:52] 2025-10-13 17:17:20,063 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 19:17:52] 2025-10-13 17:17:20,063 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 19:17:52] 2025-10-13 17:17:20,063 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 19:17:52] 2025-10-13 17:17:20,063 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 19:17:52] 2025-10-13 17:17:20,063 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 19:17:52] 2025-10-13 17:17:20,063 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 19:17:52] 2025-10-13 17:17:20,063 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 19:17:52] 2025-10-13 17:17:20,063 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 19:17:52] 2025-10-13 17:17:20,063 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 19:17:52] 2025-10-13 17:17:20,063 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 19:17:52] 2025-10-13 17:17:20,063 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 19:17:52] 2025-10-13 17:17:20,063 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 19:17:52] 2025-10-13 17:17:20,063 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 19:17:52] 2025-10-13 17:17:20,063 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 19:17:52] 2025-10-13 17:17:20,063 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 19:17:52] 2025-10-13 17:17:20,063 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 19:17:52] 2025-10-13 17:17:20,063 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 19:17:52] 2025-10-13 17:17:20,063 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 19:17:52] 2025-10-13 17:17:20,063 | INFO     | job 6841954488 has completed (purged errors)
[2025-10-13 19:17:52] 2025-10-13 17:17:20,063 | INFO     | overall cleanup function is called
[2025-10-13 19:17:52] 2025-10-13 17:17:21,067 | INFO     | --- collectZombieJob: --- 10, [13068]
[2025-10-13 19:17:52] 2025-10-13 17:17:21,067 | INFO     | zombie collector waiting for pid 13068
[2025-10-13 19:17:52] 2025-10-13 17:17:21,067 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 19:17:52] 2025-10-13 17:17:21,067 | INFO     | collected zombie processes
[2025-10-13 19:17:52] 2025-10-13 17:17:21,067 | INFO     | will attempt to kill all subprocesses of pid=13068
[2025-10-13 19:17:52] 2025-10-13 17:17:21,094 | INFO     | process IDs to be killed: [13068] (in reverse order)
[2025-10-13 19:17:52] 2025-10-13 17:17:21,111 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 19:17:52] 2025-10-13 17:17:21,112 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 19:17:52] 2025-10-13 17:17:21,113 | INFO     | did not find any defunct processes belonging to 13068
[2025-10-13 19:17:52] 2025-10-13 17:17:21,114 | INFO     | did not find any defunct processes belonging to 13068
[2025-10-13 19:17:52] 2025-10-13 17:17:21,114 | INFO     | ready for new job
[2025-10-13 19:17:52] 2025-10-13 17:17:21,114 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 19:17:52] 2025-10-13 17:17:21,115 | INFO     | ***************************************
[2025-10-13 19:17:52] 2025-10-13 17:17:21,115 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 19:17:52] 2025-10-13 17:17:21,115 | INFO     | ***************************************
[2025-10-13 19:17:52] 2025-10-13 17:17:21,115 | INFO     | 
[2025-10-13 19:17:52] 2025-10-13 17:17:21,116 | INFO     | architecture information:
[2025-10-13 19:17:52] 2025-10-13 17:17:21,116 | INFO     | executing command: cat /etc/os-release
[2025-10-13 19:17:52] 2025-10-13 17:17:21,122 | INFO     | cat /etc/os-release:
[2025-10-13 19:17:52] NAME="CentOS Linux"
[2025-10-13 19:17:52] VERSION="7 (Core)"
[2025-10-13 19:17:52] ID="centos"
[2025-10-13 19:17:52] ID_LIKE="rhel fedora"
[2025-10-13 19:17:52] VERSION_ID="7"
[2025-10-13 19:17:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 19:17:52] ANSI_COLOR="0;31"
[2025-10-13 19:17:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 19:17:52] HOME_URL="https://www.centos.org/"
[2025-10-13 19:17:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 19:17:52] 
[2025-10-13 19:17:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 19:17:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 19:17:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 19:17:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 19:17:52] 
[2025-10-13 19:17:52] 2025-10-13 17:17:21,122 | INFO     | ***************************************
[2025-10-13 19:17:52] 2025-10-13 17:17:21,625 | INFO     | executing command: df -mP /var/lib/boinc/slots/12
[2025-10-13 19:17:52] 2025-10-13 17:17:21,635 | INFO     | sufficient remaining disk space (124126232576 B)
[2025-10-13 19:17:52] 2025-10-13 17:17:21,635 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 19:17:52] 2025-10-13 17:17:21,635 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 19:17:52] 2025-10-13 17:17:21,635 | INFO     | update_server=False
[2025-10-13 19:17:52] 2025-10-13 17:17:21,635 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 19:17:52] 2025-10-13 17:17:21,635 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 19:17:52] 2025-10-13 17:17:21,635 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 19:17:52] 2025-10-13 17:17:21,635 | INFO     | aborting loop
[2025-10-13 19:17:52] 2025-10-13 17:17:21,761 | INFO     | all data control threads have been joined
[2025-10-13 19:17:52] 2025-10-13 17:17:21,857 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 19:17:52] 2025-10-13 17:17:22,064 | INFO     | all job control threads have been joined
[2025-10-13 19:17:52] 2025-10-13 17:17:22,187 | INFO     | all payload control threads have been joined
[2025-10-13 19:17:52] 2025-10-13 17:17:22,639 | INFO     | [job] queue monitor thread has finished
[2025-10-13 19:17:52] 2025-10-13 17:17:22,641 | INFO     | [job] retrieve thread has finished
[2025-10-13 19:17:52] 2025-10-13 17:17:22,641 | INFO     | [job] job monitor thread has finished
[2025-10-13 19:17:52] 2025-10-13 17:17:22,746 | INFO     | [payload] validate_post thread has finished
[2025-10-13 19:17:52] 2025-10-13 17:17:22,762 | INFO     | [data] control thread has finished
[2025-10-13 19:17:52] 2025-10-13 17:17:22,908 | INFO     | [payload] failed_post thread has finished
[2025-10-13 19:17:52] 2025-10-13 17:17:23,070 | INFO     | [job] control thread has finished
[2025-10-13 19:17:52] 2025-10-13 17:17:23,193 | INFO     | [payload] control thread has finished
[2025-10-13 19:17:52] 2025-10-13 17:17:23,516 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 19:17:52] 2025-10-13 17:17:23,576 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 19:17:52] 2025-10-13 17:17:23,804 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 19:17:52] 2025-10-13 17:17:23,863 | INFO     | [data] copytool_out thread has finished
[2025-10-13 19:17:52] 2025-10-13 17:17:23,918 | INFO     | [job] validate thread has finished
[2025-10-13 19:17:52] 2025-10-13 17:17:23,969 | INFO     | [data] copytool_in thread has finished
[2025-10-13 19:17:52] 2025-10-13 17:17:23,990 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 19:17:52] 2025-10-13 17:17:24,018 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 19:17:52] 2025-10-13 17:17:27,810 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 19:17:52] 2025-10-13 17:17:28,360 | INFO     | [monitor] cgroup control has ended
[2025-10-13 19:17:52] 2025-10-13 17:17:28,962 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140584303593280)>', '<ExcThread(monitor, started 140583909701376)>']
[2025-10-13 19:17:52] 2025-10-13 17:17:33,988 | INFO     | all workflow threads have been joined
[2025-10-13 19:17:52] 2025-10-13 17:17:33,988 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 19:17:52] 2025-10-13 17:17:33,988 | INFO     | traces error code: 0
[2025-10-13 19:17:52] 2025-10-13 17:17:33,988 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 19:17:52] 2025-10-13 17:17:52,590 | INFO     | PID=6500 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-13 19:17:52] 2025-10-13 17:17:52,590 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 19:17:52] 2025-10-13 17:17:52,590 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 19:17:52] 2025-10-13 17:17:52,590 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 19:17:52] 2025-10-13 17:17:52,590 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 19:17:52] 2025-10-13 17:17:52,590 | INFO     | [monitor] control thread has ended
[2025-10-13 19:17:52] 2025-10-13 17:17:52,624 [wrapper] ==== pilot stdout END ====
[2025-10-13 19:17:52] 2025-10-13 17:17:52,625 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 19:17:52] 2025-10-13 17:17:52,626 [wrapper] pilotpid: 6500
[2025-10-13 19:17:52] 2025-10-13 17:17:52,627 [wrapper] Pilot exit status: 0
[2025-10-13 19:17:52] 2025-10-13 17:17:52,631 [wrapper] pandaids: 6841954488
[2025-10-13 19:17:52] 2025-10-13 17:17:52,644 [wrapper] cleanup supervisor_pilot 19706 6501
[2025-10-13 19:17:52] 2025-10-13 17:17:52,645 [wrapper] Test setup, not cleaning
[2025-10-13 19:17:52] 2025-10-13 17:17:52,646 [wrapper] apfmon messages muted
[2025-10-13 19:17:52] 2025-10-13 17:17:52,647 [wrapper] ==== wrapper stdout END ====
[2025-10-13 19:17:52] 2025-10-13 17:17:52,648 [wrapper] ==== wrapper stderr END ====
[2025-10-13 19:17:52]  *** Error codes and diagnostics ***
[2025-10-13 19:17:52]     "exeErrorCode": 0,
[2025-10-13 19:17:52]     "exeErrorDiag": "",
[2025-10-13 19:17:52]     "pilotErrorCode": 0,
[2025-10-13 19:17:52]     "pilotErrorDiag": "",
[2025-10-13 19:17:52]  *** Listing of results directory ***
[2025-10-13 19:17:52] total 416544
[2025-10-13 19:17:52] -rw-r--r-- 1 boinc boinc      5112 Oct 13 05:15 queuedata.json
[2025-10-13 19:17:52] -rw-r--r-- 1 boinc boinc    557409 Oct 13 05:15 pilot3.tar.gz
[2025-10-13 19:17:52] -rwx------ 1 boinc boinc     36292 Oct 13 05:16 runpilot2-wrapper.sh
[2025-10-13 19:17:52] -rw-r--r-- 1 boinc boinc       100 Oct 13 18:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 19:17:52] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 18:48 run_atlas
[2025-10-13 19:17:52] -rw-r--r-- 1 boinc boinc       105 Oct 13 18:48 job.xml
[2025-10-13 19:17:52] -rw-r--r-- 2 boinc boinc     15120 Oct 13 18:48 start_atlas.sh
[2025-10-13 19:17:52] drwxrwx--x 2 boinc boinc      4096 Oct 13 18:48 shared
[2025-10-13 19:17:52] -rw-r--r-- 2 boinc boinc    569685 Oct 13 18:48 input.tar.gz
[2025-10-13 19:17:52] -rw-r--r-- 1 boinc boinc      7149 Oct 13 18:48 init_data.xml
[2025-10-13 19:17:52] -rw-r--r-- 2 boinc boinc 220697693 Oct 13 18:48 EVNT.46676267._002736.pool.root.1
[2025-10-13 19:17:52] -rw-r--r-- 1 boinc boinc         0 Oct 13 18:48 boinc_lockfile
[2025-10-13 19:17:52] -rw-r--r-- 1 boinc boinc      2550 Oct 13 18:48 pandaJob.out
[2025-10-13 19:17:52] -rw------- 1 boinc boinc    972783 Oct 13 18:48 agis_schedconf.cvmfs.json
[2025-10-13 19:17:52] -rw------- 1 boinc boinc   1560580 Oct 13 18:48 agis_ddmendpoints.agis.ALL.json
[2025-10-13 19:17:52] drwx------ 5 boinc boinc      4096 Oct 13 18:48 pilot3
[2025-10-13 19:17:52] -rw-r--r-- 1 boinc boinc       529 Oct 13 19:16 boinc_task_state.xml
[2025-10-13 19:17:52] -rw------- 1 boinc boinc 200695241 Oct 13 19:16 HITS.46676269._095653.pool.root.1
[2025-10-13 19:17:52] -rw------- 1 boinc boinc      1011 Oct 13 19:17 memory_monitor_summary.json
[2025-10-13 19:17:52] -rw------- 1 boinc boinc    339023 Oct 13 19:17 log.46676269._095653.job.log.tgz.1
[2025-10-13 19:17:52] -rw------- 1 boinc boinc      7734 Oct 13 19:17 heartbeat.json
[2025-10-13 19:17:52] -rw-r--r-- 1 boinc boinc      8192 Oct 13 19:17 boinc_mmap_file
[2025-10-13 19:17:52] -rw-r--r-- 1 boinc boinc        27 Oct 13 19:17 wrapper_checkpoint.txt
[2025-10-13 19:17:52] -rw------- 1 boinc boinc       744 Oct 13 19:17 pilotlog.txt
[2025-10-13 19:17:52] -rw------- 1 boinc boinc        95 Oct 13 19:17 pilot_heartbeat.json
[2025-10-13 19:17:52] -rw------- 1 boinc boinc    284186 Oct 13 19:17 log.46676269._095653.job.log.1
[2025-10-13 19:17:52] -rw------- 1 boinc boinc       357 Oct 13 19:17 output.list
[2025-10-13 19:17:52] -rw-r--r-- 1 boinc boinc      8666 Oct 13 19:17 runtime_log.err
[2025-10-13 19:17:52] -rw-r--r-- 1 boinc boinc       620 Oct 13 19:17 runtime_log
[2025-10-13 19:17:52] -rw------- 1 boinc boinc    645120 Oct 13 19:17 result.tar.gz
[2025-10-13 19:17:52] -rw------- 1 boinc boinc       640 Oct 13 19:17 gFMLDm5DOS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmCcVMDmh3j8bm.diag
[2025-10-13 19:17:52] -rw-r--r-- 1 boinc boinc     22120 Oct 13 19:17 stderr.txt
[2025-10-13 19:17:52] HITS file was successfully produced:
[2025-10-13 19:17:52] -rw------- 1 boinc boinc 200695241 Oct 13 19:16 shared/HITS.pool.root.1
[2025-10-13 19:17:52]  *** Contents of shared directory: ***
[2025-10-13 19:17:52] total 412736
[2025-10-13 19:17:52] -rw-r--r-- 2 boinc boinc     15120 Oct 13 18:48 start_atlas.sh
[2025-10-13 19:17:52] -rw-r--r-- 2 boinc boinc    569685 Oct 13 18:48 input.tar.gz
[2025-10-13 19:17:52] -rw-r--r-- 2 boinc boinc 220697693 Oct 13 18:48 ATLAS.root_0
[2025-10-13 19:17:52] -rw------- 1 boinc boinc 200695241 Oct 13 19:16 HITS.pool.root.1
[2025-10-13 19:17:52] -rw------- 1 boinc boinc    645120 Oct 13 19:17 result.tar.gz
19:17:54 (2621): run_atlas exited; CPU time 18602.609948
19:17:54 (2621): called boinc_finish(0)

</stderr_txt>
]]>

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