Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:46:28 (4048356): wrapper (7.7.26015): starting
07:46:28 (4048356): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 07:46:28] Arguments: --nthreads 8
[2025-10-13 07:46:28] Threads: 8
[2025-10-13 07:46:28] Checking for CVMFS
[2025-10-13 07:46:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 07:46:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 07:46:29] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 07:46:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 07:46:29] 2.13.2.0 5096 7078 97024 151660 3 555 20779308 40960001 20176 16776704 0 19164103 99.869 4779650 33287 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 07:46:29] CVMFS is ok
[2025-10-13 07:46:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 07:46:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 07:46:29] Further information can be found at the LHC@home message board.
[2025-10-13 07:46:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 07:46:29] Checking for apptainer binary...
[2025-10-13 07:46:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 07:46:29] Running /usr/bin/apptainer --version
[2025-10-13 07:46:29] apptainer version 1.4.3-1.el9
[2025-10-13 07:46:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 07:46:30] c-212-5.aglt2.org
[2025-10-13 07:46:30] apptainer works
[2025-10-13 07:46:30] Set ATHENA_PROC_NUMBER=8
[2025-10-13 07:46:30] Set ATHENA_CORE_NUMBER=8
[2025-10-13 07:46:30] Starting ATLAS job with PandaID=6842248309
[2025-10-13 07:46:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 10:50:27]  *** The last 200 lines of the pilot log: ***
[2025-10-13 10:50:27] 2025-10-13 14:49:25,628 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 10:50:27] 2025-10-13 14:49:25,628 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 10:50:27] 2025-10-13 14:49:25,632 | INFO     | fitting pss+swap vs Time
[2025-10-13 10:50:27] 2025-10-13 14:49:25,632 | INFO     | sum of square deviations: 1748743946.449437
[2025-10-13 10:50:27] 2025-10-13 14:49:25,633 | INFO     | sum of deviations: 55139071218.618
[2025-10-13 10:50:27] 2025-10-13 14:49:25,634 | INFO     | mean x: 1760361491.516854
[2025-10-13 10:50:27] 2025-10-13 14:49:25,634 | INFO     | mean y: 2462913.9606741574
[2025-10-13 10:50:27] 2025-10-13 14:49:25,634 | INFO     | -- intersect: -55502917303.8441
[2025-10-13 10:50:27] 2025-10-13 14:49:25,634 | INFO     | intersect: -55502917303.8441
[2025-10-13 10:50:27] 2025-10-13 14:49:25,634 | INFO     | chi2: 2.4612349984671527
[2025-10-13 10:50:27] 2025-10-13 14:49:25,634 | INFO     | sum of square deviations: 1605477058.9479809
[2025-10-13 10:50:27] 2025-10-13 14:49:25,635 | INFO     | sum of deviations: 53525890287.872795
[2025-10-13 10:50:27] 2025-10-13 14:49:25,635 | INFO     | mean x: 1760361339.0173411
[2025-10-13 10:50:27] 2025-10-13 14:49:25,635 | INFO     | mean y: 2461196.3757225433
[2025-10-13 10:50:27] 2025-10-13 14:49:25,635 | INFO     | -- intersect: -58687202024.97089
[2025-10-13 10:50:27] 2025-10-13 14:49:25,636 | INFO     | intersect: -58687202024.97089
[2025-10-13 10:50:27] 2025-10-13 14:49:25,636 | INFO     | chi2: 2.461108469268379
[2025-10-13 10:50:27] 2025-10-13 14:49:25,636 | INFO     | current chi2=2.461108469268379 (change=0.005140882477794335 %)
[2025-10-13 10:50:27] 2025-10-13 14:49:25,636 | INFO     | right removable region: 172
[2025-10-13 10:50:27] 2025-10-13 14:49:25,636 | INFO     | sum of square deviations: 1605475228.9479809
[2025-10-13 10:50:27] 2025-10-13 14:49:25,637 | INFO     | sum of deviations: 14081883305.624285
[2025-10-13 10:50:27] 2025-10-13 14:49:25,637 | INFO     | mean x: 1760361644.0173411
[2025-10-13 10:50:27] 2025-10-13 14:49:25,637 | INFO     | mean y: 2506321.7919075144
[2025-10-13 10:50:27] 2025-10-13 14:49:25,637 | INFO     | -- intersect: -15437910820.60943
[2025-10-13 10:50:27] 2025-10-13 14:49:25,637 | INFO     | intersect: -15437910820.60943
[2025-10-13 10:50:27] 2025-10-13 14:49:25,638 | INFO     | chi2: 0.13328463982774383
[2025-10-13 10:50:27] 2025-10-13 14:49:25,638 | INFO     | current chi2=0.13328463982774383 (change=94.58464389175543 %)
[2025-10-13 10:50:27] 2025-10-13 14:49:25,638 | INFO     | sum of square deviations: 1470253173.9464278
[2025-10-13 10:50:27] 2025-10-13 14:49:25,639 | INFO     | sum of deviations: 5006704056.892852
[2025-10-13 10:50:27] 2025-10-13 14:49:25,639 | INFO     | mean x: 1760361796.517857
[2025-10-13 10:50:27] 2025-10-13 14:49:25,639 | INFO     | mean y: 2516515.035714286
[2025-10-13 10:50:27] 2025-10-13 14:49:25,639 | INFO     | -- intersect: -5992104482.494802
[2025-10-13 10:50:27] 2025-10-13 14:49:25,639 | INFO     | intersect: -5992104482.494802
[2025-10-13 10:50:27] 2025-10-13 14:49:25,639 | INFO     | chi2: 0.04301131163701853
[2025-10-13 10:50:27] 2025-10-13 14:49:25,639 | INFO     | current chi2=0.04301131163701853 (change=67.72973112835354 %)
[2025-10-13 10:50:27] 2025-10-13 14:49:25,639 | INFO     | sum of square deviations: 1342845218.9447916
[2025-10-13 10:50:27] 2025-10-13 14:49:25,640 | INFO     | sum of deviations: 3073136295.435583
[2025-10-13 10:50:27] 2025-10-13 14:49:25,641 | INFO     | mean x: 1760361949.018405
[2025-10-13 10:50:27] 2025-10-13 14:49:25,641 | INFO     | mean y: 2518795.5214723926
[2025-10-13 10:50:27] 2025-10-13 14:49:25,641 | INFO     | -- intersect: -4026115422.5630455
[2025-10-13 10:50:27] 2025-10-13 14:49:25,641 | INFO     | intersect: -4026115422.5630455
[2025-10-13 10:50:27] 2025-10-13 14:49:25,641 | INFO     | chi2: 0.035332733337694607
[2025-10-13 10:50:27] 2025-10-13 14:49:25,641 | INFO     | current chi2=0.035332733337694607 (change=17.852462543167842 %)
[2025-10-13 10:50:27] 2025-10-13 14:49:25,641 | INFO     | left removable region: 30
[2025-10-13 10:50:27] 2025-10-13 14:49:25,642 | INFO     | sum of square deviations: 887815505.4366174
[2025-10-13 10:50:27] 2025-10-13 14:49:25,642 | INFO     | sum of deviations: 3338131999.2535214
[2025-10-13 10:50:27] 2025-10-13 14:49:25,642 | INFO     | mean x: 1760362223.5211267
[2025-10-13 10:50:27] 2025-10-13 14:49:25,642 | INFO     | mean y: 2517954.415492958
[2025-10-13 10:50:27] 2025-10-13 14:49:25,642 | INFO     | -- intersect: -6616336337.527794
[2025-10-13 10:50:27] 2025-10-13 14:49:25,643 | INFO     | intersect: -6616336337.527794
[2025-10-13 10:50:27] 2025-10-13 14:49:25,643 | INFO     | chi2: 0.016397812118853272
[2025-10-13 10:50:27] 2025-10-13 14:49:25,643 | INFO     | -- intersect: -6616336337.527794
[2025-10-13 10:50:27] 2025-10-13 14:49:25,643 | INFO     | current memory leak: 3.76 B/s (using 142 data points, chi2=0.02)
[2025-10-13 10:50:27] 2025-10-13 14:49:25,644 | INFO     | could have reported an average CPU frequency of 2953 MHz (10 samples)
[2025-10-13 10:50:27] 2025-10-13 14:49:25,644 | INFO     | ..............................
[2025-10-13 10:50:27] 2025-10-13 14:49:25,644 | INFO     | . Timing measurements:
[2025-10-13 10:50:27] 2025-10-13 14:49:25,644 | INFO     | . get job = 0 s
[2025-10-13 10:50:27] 2025-10-13 14:49:25,644 | INFO     | . initial setup = 2 s
[2025-10-13 10:50:27] 2025-10-13 14:49:25,644 | INFO     | . payload setup = 21 s
[2025-10-13 10:50:27] 2025-10-13 14:49:25,645 | INFO     | . stage-in = 0 s
[2025-10-13 10:50:27] 2025-10-13 14:49:25,645 | INFO     | . payload execution = 10868 s
[2025-10-13 10:50:27] 2025-10-13 14:49:25,645 | INFO     | . stage-out = 2 s
[2025-10-13 10:50:27] 2025-10-13 14:49:25,645 | INFO     | . log creation = 0 s
[2025-10-13 10:50:27] 2025-10-13 14:49:25,645 | INFO     | ..............................
[2025-10-13 10:50:27] 2025-10-13 14:49:25,734 | INFO     | 
[2025-10-13 10:50:27] 2025-10-13 14:49:25,735 | INFO     | job summary report
[2025-10-13 10:50:27] 2025-10-13 14:49:25,735 | INFO     | --------------------------------------------------
[2025-10-13 10:50:27] 2025-10-13 14:49:25,735 | INFO     | PanDA job id: 6842248309
[2025-10-13 10:50:27] 2025-10-13 14:49:25,735 | INFO     | task id: 46676269
[2025-10-13 10:50:27] 2025-10-13 14:49:25,735 | INFO     | errors: (none)
[2025-10-13 10:50:27] 2025-10-13 14:49:25,735 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 10:50:27] 2025-10-13 14:49:25,736 | INFO     | pilot state: finished 
[2025-10-13 10:50:27] 2025-10-13 14:49:25,736 | INFO     | transexitcode: 0
[2025-10-13 10:50:27] 2025-10-13 14:49:25,736 | INFO     | exeerrorcode: 0
[2025-10-13 10:50:27] 2025-10-13 14:49:25,736 | INFO     | exeerrordiag: 
[2025-10-13 10:50:27] 2025-10-13 14:49:25,736 | INFO     | exitcode: 0
[2025-10-13 10:50:27] 2025-10-13 14:49:25,736 | INFO     | exitmsg: OK
[2025-10-13 10:50:27] 2025-10-13 14:49:25,736 | INFO     | cpuconsumptiontime: 41695 s
[2025-10-13 10:50:27] 2025-10-13 14:49:25,736 | INFO     | nevents: 400
[2025-10-13 10:50:27] 2025-10-13 14:49:25,736 | INFO     | neventsw: 0
[2025-10-13 10:50:27] 2025-10-13 14:49:25,736 | INFO     | pid: 4067178
[2025-10-13 10:50:27] 2025-10-13 14:49:25,736 | INFO     | pgrp: 4067178
[2025-10-13 10:50:27] 2025-10-13 14:49:25,736 | INFO     | corecount: 8
[2025-10-13 10:50:27] 2025-10-13 14:49:25,736 | INFO     | event service: False
[2025-10-13 10:50:27] 2025-10-13 14:49:25,737 | INFO     | sizes: {0: 2348635, 1: 2348834, 12: 2348834, 17: 2349124, 22: 2349152, 10892: 2378330, 10893: 2378457, 10896: 2387511, 10897: 2387567, 10908: 2387761}
[2025-10-13 10:50:27] 2025-10-13 14:49:25,737 | INFO     | --------------------------------------------------
[2025-10-13 10:50:27] 2025-10-13 14:49:25,737 | INFO     | 
[2025-10-13 10:50:27] 2025-10-13 14:49:25,737 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 10:50:27] 2025-10-13 14:49:25,769 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 10:50:27] 2025-10-13 14:49:25,770 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 10:50:27] 2025-10-13 14:49:25,770 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 10:50:27] 2025-10-13 14:49:25,770 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 10:50:27] 2025-10-13 14:49:25,770 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 10:50:27] 2025-10-13 14:49:25,770 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 10:50:27] 2025-10-13 14:49:25,770 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 10:50:27] 2025-10-13 14:49:25,770 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 10:50:27] 2025-10-13 14:49:25,770 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 10:50:27] 2025-10-13 14:49:25,771 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 10:50:27] 2025-10-13 14:49:25,771 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 10:50:27] 2025-10-13 14:49:25,771 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 10:50:27] 2025-10-13 14:49:25,771 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 10:50:27] 2025-10-13 14:49:25,771 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 10:50:27] 2025-10-13 14:49:25,771 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 10:50:27] 2025-10-13 14:49:25,771 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 10:50:27] 2025-10-13 14:49:25,771 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 10:50:27] 2025-10-13 14:49:25,771 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 10:50:27] 2025-10-13 14:49:25,771 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 10:50:27] 2025-10-13 14:49:25,771 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 10:50:27] 2025-10-13 14:49:25,772 | INFO     | job 6842248309 has completed (purged errors)
[2025-10-13 10:50:27] 2025-10-13 14:49:25,772 | INFO     | overall cleanup function is called
[2025-10-13 10:50:27] 2025-10-13 14:49:26,783 | INFO     | --- collectZombieJob: --- 10, [4067178]
[2025-10-13 10:50:27] 2025-10-13 14:49:26,783 | INFO     | zombie collector waiting for pid 4067178
[2025-10-13 10:50:27] 2025-10-13 14:49:26,784 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 10:50:27] 2025-10-13 14:49:26,784 | INFO     | collected zombie processes
[2025-10-13 10:50:27] 2025-10-13 14:49:26,784 | INFO     | will attempt to kill all subprocesses of pid=4067178
[2025-10-13 10:50:27] 2025-10-13 14:49:27,221 | INFO     | process IDs to be killed: [4067178] (in reverse order)
[2025-10-13 10:50:27] 2025-10-13 14:49:27,359 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 10:50:27] 2025-10-13 14:49:27,359 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 10:50:27] 2025-10-13 14:49:27,377 | INFO     | did not find any defunct processes belonging to 4067178
[2025-10-13 10:50:27] 2025-10-13 14:49:27,392 | INFO     | did not find any defunct processes belonging to 4067178
[2025-10-13 10:50:27] 2025-10-13 14:49:27,392 | INFO     | ready for new job
[2025-10-13 10:50:27] 2025-10-13 14:49:27,393 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 10:50:27] 2025-10-13 14:49:27,394 | INFO     | ***************************************
[2025-10-13 10:50:27] 2025-10-13 14:49:27,395 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 10:50:27] 2025-10-13 14:49:27,395 | INFO     | ***************************************
[2025-10-13 10:50:27] 2025-10-13 14:49:27,395 | INFO     | 
[2025-10-13 10:50:27] 2025-10-13 14:49:27,400 | INFO     | architecture information:
[2025-10-13 10:50:27] 2025-10-13 14:49:27,400 | INFO     | executing command: cat /etc/os-release
[2025-10-13 10:50:27] 2025-10-13 14:49:27,421 | INFO     | cat /etc/os-release:
[2025-10-13 10:50:27] NAME="CentOS Linux"
[2025-10-13 10:50:27] VERSION="7 (Core)"
[2025-10-13 10:50:27] ID="centos"
[2025-10-13 10:50:27] ID_LIKE="rhel fedora"
[2025-10-13 10:50:27] VERSION_ID="7"
[2025-10-13 10:50:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 10:50:27] ANSI_COLOR="0;31"
[2025-10-13 10:50:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 10:50:27] HOME_URL="https://www.centos.org/"
[2025-10-13 10:50:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 10:50:27] 
[2025-10-13 10:50:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 10:50:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 10:50:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 10:50:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 10:50:27] 
[2025-10-13 10:50:27] 2025-10-13 14:49:27,422 | INFO     | ***************************************
[2025-10-13 10:50:27] 2025-10-13 14:49:27,925 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 10:50:27] 2025-10-13 14:49:27,995 | INFO     | sufficient remaining disk space (127922077696 B)
[2025-10-13 10:50:27] 2025-10-13 14:49:27,996 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 10:50:27] 2025-10-13 14:49:27,996 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 10:50:27] 2025-10-13 14:49:27,996 | INFO     | update_server=False
[2025-10-13 10:50:27] 2025-10-13 14:49:27,996 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 10:50:27] 2025-10-13 14:49:27,998 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 10:50:27] 2025-10-13 14:49:27,998 | INFO     | aborting loop
[2025-10-13 10:50:27] 2025-10-13 14:49:28,461 | INFO     | all payload control threads have been joined
[2025-10-13 10:50:27] 2025-10-13 14:49:28,522 | INFO     | all data control threads have been joined
[2025-10-13 10:50:27] 2025-10-13 14:49:29,003 | INFO     | [job] job monitor thread has finished
[2025-10-13 10:50:27] 2025-10-13 14:49:29,004 | INFO     | [job] retrieve thread has finished
[2025-10-13 10:50:27] 2025-10-13 14:49:29,288 | INFO     | all job control threads have been joined
[2025-10-13 10:50:27] 2025-10-13 14:49:29,297 | INFO     | [payload] validate_post thread has finished
[2025-10-13 10:50:27] 2025-10-13 14:49:29,320 | INFO     | [job] validate thread has finished
[2025-10-13 10:50:27] 2025-10-13 14:49:29,391 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 10:50:27] 2025-10-13 14:49:29,467 | INFO     | [payload] control thread has finished
[2025-10-13 10:50:27] 2025-10-13 14:49:29,528 | INFO     | [data] control thread has finished
[2025-10-13 10:50:27] 2025-10-13 14:49:29,562 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 10:50:27] 2025-10-13 14:49:29,768 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 10:50:27] 2025-10-13 14:49:30,074 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 10:50:27] 2025-10-13 14:49:30,264 | INFO     | [payload] failed_post thread has finished
[2025-10-13 10:50:27] 2025-10-13 14:49:30,294 | INFO     | [job] control thread has finished
[2025-10-13 10:50:27] 2025-10-13 14:49:30,376 | INFO     | [data] copytool_in thread has finished
[2025-10-13 10:50:27] 2025-10-13 14:49:30,465 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 10:50:27] 2025-10-13 14:49:30,749 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 10:50:27] 2025-10-13 14:49:31,401 | INFO     | [data] copytool_out thread has finished
[2025-10-13 10:50:27] 2025-10-13 14:49:31,755 | INFO     | [job] queue monitor thread has finished
[2025-10-13 10:50:27] 2025-10-13 14:49:33,778 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 10:50:27] 2025-10-13 14:49:38,166 | INFO     | job.realtimelogging is not enabled
[2025-10-13 10:50:27] 2025-10-13 14:49:39,172 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 10:50:27] 2025-10-13 14:49:59,215 | INFO     | PID=4053763 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 10:50:27] 2025-10-13 14:49:59,215 | INFO     | .. there are 16 such processes running
[2025-10-13 10:50:27] 2025-10-13 14:49:59,216 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 10:50:27] 2025-10-13 14:49:59,216 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 10:50:27] 2025-10-13 14:49:59,216 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 10:50:27] 2025-10-13 14:50:20,574 | INFO     | [monitor] cgroup control has ended
[2025-10-13 10:50:27] 2025-10-13 14:50:22,355 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139905755182912)>', '<ExcThread(monitor, started 139904466024192)>']
[2025-10-13 10:50:27] 2025-10-13 14:50:23,358 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 10:50:27] 2025-10-13 14:50:23,359 | INFO     | [monitor] control thread has ended
[2025-10-13 10:50:27] 2025-10-13 14:50:27,381 | INFO     | all workflow threads have been joined
[2025-10-13 10:50:27] 2025-10-13 14:50:27,381 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 10:50:27] 2025-10-13 14:50:27,381 | INFO     | traces error code: 0
[2025-10-13 10:50:27] 2025-10-13 14:50:27,381 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 10:50:27] 2025-10-13 14:50:27,609 [wrapper] ==== pilot stdout END ====
[2025-10-13 10:50:27] 2025-10-13 14:50:27,613 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 10:50:27] 2025-10-13 14:50:27,617 [wrapper] pilotpid: 4053763
[2025-10-13 10:50:27] 2025-10-13 14:50:27,638 [wrapper] Pilot exit status: 0
[2025-10-13 10:50:27] 2025-10-13 14:50:27,674 [wrapper] pandaids: 6842248309
[2025-10-13 10:50:27] 2025-10-13 14:50:27,760 [wrapper] cleanup supervisor_pilot  212458 4053765
[2025-10-13 10:50:27] 2025-10-13 14:50:27,765 [wrapper] Test setup, not cleaning
[2025-10-13 10:50:27] 2025-10-13 14:50:27,769 [wrapper] apfmon messages muted
[2025-10-13 10:50:27] 2025-10-13 14:50:27,784 [wrapper] ==== wrapper stdout END ====
[2025-10-13 10:50:27] 2025-10-13 14:50:27,788 [wrapper] ==== wrapper stderr END ====
[2025-10-13 10:50:27]  *** Error codes and diagnostics ***
[2025-10-13 10:50:27]     "exeErrorCode": 0,
[2025-10-13 10:50:27]     "exeErrorDiag": "",
[2025-10-13 10:50:27]     "pilotErrorCode": 0,
[2025-10-13 10:50:27]     "pilotErrorDiag": "",
[2025-10-13 10:50:27]  *** Listing of results directory ***
[2025-10-13 10:50:27] total 413620
[2025-10-13 10:50:27] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 23:15 pilot3.tar.gz
[2025-10-13 10:50:27] -rwx------. 1 boincer umatlas     36292 Oct 12 23:35 runpilot2-wrapper.sh
[2025-10-13 10:50:27] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 23:35 queuedata.json
[2025-10-13 10:50:27] -rw-r--r--. 1 boincer umatlas       100 Oct 13 07:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 10:50:27] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 07:46 run_atlas
[2025-10-13 10:50:27] -rw-r--r--. 1 boincer umatlas       105 Oct 13 07:46 job.xml
[2025-10-13 10:50:27] -rw-r--r--. 2 boincer umatlas 219544968 Oct 13 07:46 EVNT.46676267._003650.pool.root.1
[2025-10-13 10:50:27] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 07:46 start_atlas.sh
[2025-10-13 10:50:27] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 07:46 shared
[2025-10-13 10:50:27] -rw-r--r--. 2 boincer umatlas    569680 Oct 13 07:46 input.tar.gz
[2025-10-13 10:50:27] -rw-r--r--. 1 boincer umatlas         0 Oct 13 07:46 boinc_lockfile
[2025-10-13 10:50:27] -rw-r--r--. 1 boincer umatlas      2549 Oct 13 07:46 pandaJob.out
[2025-10-13 10:50:27] -rw-------. 1 boincer umatlas    972497 Oct 13 07:46 agis_schedconf.cvmfs.json
[2025-10-13 10:50:27] drwx------. 5 boincer umatlas      4096 Oct 13 07:47 pilot3
[2025-10-13 10:50:27] -rw-r--r--. 1 boincer umatlas      6946 Oct 13 10:45 init_data.xml
[2025-10-13 10:50:27] -rw-------. 1 boincer umatlas 196212394 Oct 13 10:48 HITS.46676269._095979.pool.root.1
[2025-10-13 10:50:27] -rw-r--r--. 1 boincer umatlas       531 Oct 13 10:48 boinc_task_state.xml
[2025-10-13 10:50:27] -rw-------. 1 boincer umatlas      1044 Oct 13 10:49 memory_monitor_summary.json
[2025-10-13 10:50:27] -rw-------. 1 boincer umatlas   1560580 Oct 13 10:49 agis_ddmendpoints.agis.ALL.json
[2025-10-13 10:50:27] -rw-------. 1 boincer umatlas    426898 Oct 13 10:49 log.46676269._095979.job.log.tgz.1
[2025-10-13 10:50:27] -rw-------. 1 boincer umatlas      7799 Oct 13 10:49 heartbeat.json
[2025-10-13 10:50:27] -rw-------. 1 boincer umatlas        95 Oct 13 10:49 pilot_heartbeat.json
[2025-10-13 10:50:27] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 10:50 boinc_mmap_file
[2025-10-13 10:50:27] -rw-r--r--. 1 boincer umatlas        28 Oct 13 10:50 wrapper_checkpoint.txt
[2025-10-13 10:50:27] -rw-------. 1 boincer umatlas      4897 Oct 13 10:50 pilotlog.txt
[2025-10-13 10:50:27] -rw-------. 1 boincer umatlas   1519570 Oct 13 10:50 log.46676269._095979.job.log.1
[2025-10-13 10:50:27] -rw-------. 1 boincer umatlas       357 Oct 13 10:50 output.list
[2025-10-13 10:50:27] -rw-r--r--. 1 boincer umatlas       620 Oct 13 10:50 runtime_log
[2025-10-13 10:50:27] -rw-------. 1 boincer umatlas   1966080 Oct 13 10:50 result.tar.gz
[2025-10-13 10:50:27] -rw-r--r--. 1 boincer umatlas      8699 Oct 13 10:50 runtime_log.err
[2025-10-13 10:50:27] -rw-------. 1 boincer umatlas       659 Oct 13 10:50 07vMDmAWOS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmgemNDmv3jVMn.diag
[2025-10-13 10:50:27] -rw-r--r--. 1 boincer umatlas     21014 Oct 13 10:50 stderr.txt
[2025-10-13 10:50:28] HITS file was successfully produced:
[2025-10-13 10:50:28] -rw-------. 1 boincer umatlas 196212394 Oct 13 10:48 shared/HITS.pool.root.1
[2025-10-13 10:50:28]  *** Contents of shared directory: ***
[2025-10-13 10:50:28] total 408516
[2025-10-13 10:50:28] -rw-r--r--. 2 boincer umatlas 219544968 Oct 13 07:46 ATLAS.root_0
[2025-10-13 10:50:28] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 07:46 start_atlas.sh
[2025-10-13 10:50:28] -rw-r--r--. 2 boincer umatlas    569680 Oct 13 07:46 input.tar.gz
[2025-10-13 10:50:28] -rw-------. 1 boincer umatlas 196212394 Oct 13 10:48 HITS.pool.root.1
[2025-10-13 10:50:28] -rw-------. 1 boincer umatlas   1966080 Oct 13 10:50 result.tar.gz
10:50:29 (4048356): run_atlas exited; CPU time 41947.536208
10:50:29 (4048356): called boinc_finish(0)

</stderr_txt>
]]>

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