Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:14:01 (10062): wrapper (7.7.26015): starting
05:14:01 (10062): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 05:14:01] Arguments: --nthreads 12
[2025-10-13 05:14:01] Threads: 12
[2025-10-13 05:14:01] Checking for CVMFS
[2025-10-13 05:14:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 05:14:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 05:14:02] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 05:14:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 05:14:02] 2.11.2.0 3165 9748 85848 151654 3 59 12790147 20275200 1 130560 0 9606693 99.993 321475 42371 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 05:14:02] CVMFS is ok
[2025-10-13 05:14:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 05:14:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 05:14:02] Further information can be found at the LHC@home message board.
[2025-10-13 05:14:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 05:14:02] Checking for apptainer binary...
[2025-10-13 05:14:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 05:14:02] Running /usr/bin/apptainer --version
[2025-10-13 05:14:02] apptainer version 1.3.2-1.el7
[2025-10-13 05:14:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 05:14:03] c-115-40.aglt2.org
[2025-10-13 05:14:03] apptainer works
[2025-10-13 05:14:03] Set ATHENA_PROC_NUMBER=12
[2025-10-13 05:14:03] Set ATHENA_CORE_NUMBER=12
[2025-10-13 05:14:03] Starting ATLAS job with PandaID=6841069063
[2025-10-13 05:14:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 06:21:29]  *** The last 200 lines of the pilot log: ***
[2025-10-13 06:21:29]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-13 06:21:29]  replicas=None
[2025-10-13 06:21:29]  scope=mc23_13p6TeV
[2025-10-13 06:21:29]  status=None
[2025-10-13 06:21:29]  status_code=0
[2025-10-13 06:21:29]  storage_token=
[2025-10-13 06:21:29]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6841069063/log.46676269._093272.job.log.tgz.1
[2025-10-13 06:21:29]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/aa/95/log.46676269._093272.job.log.tgz.1
[2025-10-13 06:21:29]  workdir=None
[2025-10-13 06:21:29] ]
[2025-10-13 06:21:29] 2025-10-13 10:20:45,336 | INFO     | transferring file log.46676269._093272.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6841069063/log.46676269._093272.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-13 06:21:29] 2025-10-13 10:20:45,336 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6841069063/log.46676269._093272.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._093272.job
[2025-10-13 06:21:29] 2025-10-13 10:20:45,349 | INFO     | number of running child processes to parent process 20178: 1
[2025-10-13 06:21:29] 2025-10-13 10:20:45,350 | INFO     | maximum number of monitored processes: 6
[2025-10-13 06:21:29] 2025-10-13 10:20:45,357 | INFO     | adding to output.list: log.46676269._093272.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/aa/95/log.46676269._093272.job.log.tg
[2025-10-13 06:21:29] 2025-10-13 10:20:45,358 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 06:21:29] 2025-10-13 10:20:45,358 | INFO     | summary of transferred files:
[2025-10-13 06:21:29] 2025-10-13 10:20:45,358 | INFO     |  -- lfn=log.46676269._093272.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 06:21:29] 2025-10-13 10:20:45,358 | INFO     | stage-out finished correctly
[2025-10-13 06:21:29] 2025-10-13 10:20:45,906 | INFO     | time since job start (3988s) is within the limit (172800.0s)
[2025-10-13 06:21:29] 2025-10-13 10:20:46,545 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 06:21:29] 2025-10-13 10:20:46,853 | INFO     | job 6841069063 has state=finished
[2025-10-13 06:21:29] 2025-10-13 10:20:46,853 | INFO     | preparing for final server update for job 6841069063 in state='finished'
[2025-10-13 06:21:29] 2025-10-13 10:20:46,854 | INFO     | this job has now completed (state=finished)
[2025-10-13 06:21:29] 2025-10-13 10:20:46,854 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 06:21:29] 2025-10-13 10:20:46,854 | INFO     | log transfer has been attempted: DONE
[2025-10-13 06:21:29] 2025-10-13 10:20:46,855 | INFO     | job 6841069063 has finished - writing final server update
[2025-10-13 06:21:29] 2025-10-13 10:20:46,855 | INFO     | total number of processed events: 400 (read)
[2025-10-13 06:21:29] 2025-10-13 10:20:46,856 | INFO     | executing command: lscpu
[2025-10-13 06:21:29] 2025-10-13 10:20:46,882 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 06:21:29] 2025-10-13 10:20:47,852 | INFO     | monitor loop #299: job 0:6841069063 is in state 'finished'
[2025-10-13 06:21:29] 2025-10-13 10:20:47,852 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 06:21:29] 2025-10-13 10:20:47,911 | INFO     | time since job start (3990s) is within the limit (172800.0s)
[2025-10-13 06:21:29] 2025-10-13 10:20:49,025 | INFO     | PID=13755 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 06:21:29] 2025-10-13 10:20:50,025 | INFO     | time since job start (3993s) is within the limit (172800.0s)
[2025-10-13 06:21:29] 2025-10-13 10:20:50,355 | INFO     | monitor loop #300: job 0:6841069063 is in state 'finished'
[2025-10-13 06:21:29] 2025-10-13 10:20:50,355 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 06:21:29] 2025-10-13 10:20:51,665 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-13 06:21:29] 2025-10-13 10:20:51,669 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1706.9166666666667
[2025-10-13 06:21:29] 2025-10-13 10:20:51,672 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6841069063/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 06:21:29] 2025-10-13 10:20:51,673 | INFO     | extracted standard info from prmon json
[2025-10-13 06:21:29] 2025-10-13 10:20:51,673 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 06:21:29] 2025-10-13 10:20:51,673 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 06:21:29] 2025-10-13 10:20:51,673 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 06:21:29] 2025-10-13 10:20:51,673 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 06:21:29] 2025-10-13 10:20:51,675 | INFO     | fitting pss+swap vs Time
[2025-10-13 06:21:29] 2025-10-13 10:20:51,675 | INFO     | sum of square deviations: 60482994.5
[2025-10-13 06:21:29] 2025-10-13 10:20:51,675 | INFO     | sum of deviations: -530964679.0
[2025-10-13 06:21:29] 2025-10-13 10:20:51,675 | INFO     | mean x: 1760348929.5
[2025-10-13 06:21:29] 2025-10-13 10:20:51,675 | INFO     | mean y: 2753554.5517241377
[2025-10-13 06:21:29] 2025-10-13 10:20:51,675 | INFO     | -- intersect: 15456404816.477274
[2025-10-13 06:21:29] 2025-10-13 10:20:51,676 | INFO     | intersect: 15456404816.477274
[2025-10-13 06:21:29] 2025-10-13 10:20:51,676 | INFO     | chi2: 0.007530583779168839
[2025-10-13 06:21:29] 2025-10-13 10:20:51,676 | INFO     | -- intersect: 15456404816.477274
[2025-10-13 06:21:29] 2025-10-13 10:20:51,676 | INFO     | current memory leak: -8.78 B/s (using 58 data points, chi2=0.01)
[2025-10-13 06:21:29] 2025-10-13 10:20:51,676 | INFO     | could have reported an average CPU frequency of 2143 MHz (6 samples)
[2025-10-13 06:21:29] 2025-10-13 10:20:51,676 | INFO     | ..............................
[2025-10-13 06:21:29] 2025-10-13 10:20:51,677 | INFO     | . Timing measurements:
[2025-10-13 06:21:29] 2025-10-13 10:20:51,677 | INFO     | . get job = 0 s
[2025-10-13 06:21:29] 2025-10-13 10:20:51,677 | INFO     | . initial setup = 2 s
[2025-10-13 06:21:29] 2025-10-13 10:20:51,677 | INFO     | . payload setup = 6 s
[2025-10-13 06:21:29] 2025-10-13 10:20:51,677 | INFO     | . stage-in = 0 s
[2025-10-13 06:21:29] 2025-10-13 10:20:51,677 | INFO     | . payload execution = 3959 s
[2025-10-13 06:21:29] 2025-10-13 10:20:51,677 | INFO     | . stage-out = 0 s
[2025-10-13 06:21:29] 2025-10-13 10:20:51,677 | INFO     | . log creation = 0 s
[2025-10-13 06:21:29] 2025-10-13 10:20:51,677 | INFO     | ..............................
[2025-10-13 06:21:29] 2025-10-13 10:20:51,752 | INFO     | 
[2025-10-13 06:21:29] 2025-10-13 10:20:51,752 | INFO     | job summary report
[2025-10-13 06:21:29] 2025-10-13 10:20:51,752 | INFO     | --------------------------------------------------
[2025-10-13 06:21:29] 2025-10-13 10:20:51,752 | INFO     | PanDA job id: 6841069063
[2025-10-13 06:21:29] 2025-10-13 10:20:51,752 | INFO     | task id: 46676269
[2025-10-13 06:21:29] 2025-10-13 10:20:51,752 | INFO     | errors: (none)
[2025-10-13 06:21:29] 2025-10-13 10:20:51,753 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 06:21:29] 2025-10-13 10:20:51,753 | INFO     | pilot state: finished 
[2025-10-13 06:21:29] 2025-10-13 10:20:51,753 | INFO     | transexitcode: 0
[2025-10-13 06:21:29] 2025-10-13 10:20:51,753 | INFO     | exeerrorcode: 0
[2025-10-13 06:21:29] 2025-10-13 10:20:51,753 | INFO     | exeerrordiag: 
[2025-10-13 06:21:29] 2025-10-13 10:20:51,753 | INFO     | exitcode: 0
[2025-10-13 06:21:29] 2025-10-13 10:20:51,753 | INFO     | exitmsg: OK
[2025-10-13 06:21:29] 2025-10-13 10:20:51,754 | INFO     | cpuconsumptiontime: 42244 s
[2025-10-13 06:21:29] 2025-10-13 10:20:51,754 | INFO     | nevents: 400
[2025-10-13 06:21:29] 2025-10-13 10:20:51,754 | INFO     | neventsw: 0
[2025-10-13 06:21:29] 2025-10-13 10:20:51,754 | INFO     | pid: 20178
[2025-10-13 06:21:29] 2025-10-13 10:20:51,754 | INFO     | pgrp: 20178
[2025-10-13 06:21:29] 2025-10-13 10:20:51,754 | INFO     | corecount: 12
[2025-10-13 06:21:29] 2025-10-13 10:20:51,754 | INFO     | event service: False
[2025-10-13 06:21:29] 2025-10-13 10:20:51,755 | INFO     | sizes: {0: 2348686, 1: 2348885, 6: 2349147, 12: 2349175, 3969: 2374988, 3972: 2383986, 3973: 2384170, 3978: 2384364}
[2025-10-13 06:21:29] 2025-10-13 10:20:51,755 | INFO     | --------------------------------------------------
[2025-10-13 06:21:29] 2025-10-13 10:20:51,755 | INFO     | 
[2025-10-13 06:21:29] 2025-10-13 10:20:51,755 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 06:21:29] 2025-10-13 10:20:51,780 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 06:21:29] 2025-10-13 10:20:51,780 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 06:21:29] 2025-10-13 10:20:51,780 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 06:21:29] 2025-10-13 10:20:51,780 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 06:21:29] 2025-10-13 10:20:51,780 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 06:21:29] 2025-10-13 10:20:51,781 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 06:21:29] 2025-10-13 10:20:51,781 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 06:21:29] 2025-10-13 10:20:51,781 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 06:21:29] 2025-10-13 10:20:51,781 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 06:21:29] 2025-10-13 10:20:51,781 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 06:21:29] 2025-10-13 10:20:51,781 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 06:21:29] 2025-10-13 10:20:51,782 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 06:21:29] 2025-10-13 10:20:51,782 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 06:21:29] 2025-10-13 10:20:51,782 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 06:21:29] 2025-10-13 10:20:51,782 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 06:21:29] 2025-10-13 10:20:51,782 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 06:21:29] 2025-10-13 10:20:51,782 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 06:21:29] 2025-10-13 10:20:51,783 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 06:21:29] 2025-10-13 10:20:51,783 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 06:21:29] 2025-10-13 10:20:51,783 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 06:21:29] 2025-10-13 10:20:51,783 | INFO     | job 6841069063 has completed (purged errors)
[2025-10-13 06:21:29] 2025-10-13 10:20:51,783 | INFO     | overall cleanup function is called
[2025-10-13 06:21:29] 2025-10-13 10:20:52,789 | INFO     | --- collectZombieJob: --- 10, [20178]
[2025-10-13 06:21:29] 2025-10-13 10:20:52,789 | INFO     | zombie collector waiting for pid 20178
[2025-10-13 06:21:29] 2025-10-13 10:20:52,789 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 06:21:29] 2025-10-13 10:20:52,790 | INFO     | collected zombie processes
[2025-10-13 06:21:29] 2025-10-13 10:20:52,790 | INFO     | will attempt to kill all subprocesses of pid=20178
[2025-10-13 06:21:29] 2025-10-13 10:20:52,876 | INFO     | process IDs to be killed: [20178] (in reverse order)
[2025-10-13 06:21:29] 2025-10-13 10:20:52,925 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 06:21:29] 2025-10-13 10:20:52,926 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 06:21:29] 2025-10-13 10:20:52,930 | INFO     | did not find any defunct processes belonging to 20178
[2025-10-13 06:21:29] 2025-10-13 10:20:52,933 | INFO     | did not find any defunct processes belonging to 20178
[2025-10-13 06:21:29] 2025-10-13 10:20:52,933 | INFO     | ready for new job
[2025-10-13 06:21:29] 2025-10-13 10:20:52,933 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 06:21:29] 2025-10-13 10:20:52,934 | INFO     | ***************************************
[2025-10-13 06:21:29] 2025-10-13 10:20:52,934 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 06:21:29] 2025-10-13 10:20:52,934 | INFO     | ***************************************
[2025-10-13 06:21:29] 2025-10-13 10:20:52,935 | INFO     | 
[2025-10-13 06:21:29] 2025-10-13 10:20:52,935 | INFO     | architecture information:
[2025-10-13 06:21:29] 2025-10-13 10:20:52,936 | INFO     | executing command: cat /etc/os-release
[2025-10-13 06:21:29] 2025-10-13 10:20:53,094 | INFO     | cat /etc/os-release:
[2025-10-13 06:21:29] NAME="CentOS Linux"
[2025-10-13 06:21:29] VERSION="7 (Core)"
[2025-10-13 06:21:29] ID="centos"
[2025-10-13 06:21:29] ID_LIKE="rhel fedora"
[2025-10-13 06:21:29] VERSION_ID="7"
[2025-10-13 06:21:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 06:21:29] ANSI_COLOR="0;31"
[2025-10-13 06:21:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 06:21:29] HOME_URL="https://www.centos.org/"
[2025-10-13 06:21:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 06:21:29] 
[2025-10-13 06:21:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 06:21:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 06:21:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 06:21:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 06:21:29] 
[2025-10-13 06:21:29] 2025-10-13 10:20:53,095 | INFO     | ***************************************
[2025-10-13 06:21:29] 2025-10-13 10:20:53,598 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 06:21:29] 2025-10-13 10:20:53,615 | INFO     | sufficient remaining disk space (18702401536 B)
[2025-10-13 06:21:29] 2025-10-13 10:20:53,616 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 06:21:29] 2025-10-13 10:20:53,616 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 06:21:29] 2025-10-13 10:20:53,616 | INFO     | update_server=False
[2025-10-13 06:21:29] 2025-10-13 10:20:53,616 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 06:21:29] 2025-10-13 10:20:53,617 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:21:29] 2025-10-13 10:20:53,617 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 06:21:29] 2025-10-13 10:20:53,617 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 06:21:29] 2025-10-13 10:20:53,864 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:21:29] 2025-10-13 10:20:53,864 | INFO     | aborting loop
[2025-10-13 06:21:29] 2025-10-13 10:20:54,175 | INFO     | all job control threads have been joined
[2025-10-13 06:21:29] 2025-10-13 10:20:54,366 | INFO     | all payload control threads have been joined
[2025-10-13 06:21:29] 2025-10-13 10:20:54,598 | INFO     | all data control threads have been joined
[2025-10-13 06:21:29] 2025-10-13 10:20:54,622 | INFO     | [job] retrieve thread has finished
[2025-10-13 06:21:29] 2025-10-13 10:20:54,622 | INFO     | [job] queue monitor thread has finished
[2025-10-13 06:21:29] 2025-10-13 10:20:54,869 | INFO     | [job] job monitor thread has finished
[2025-10-13 06:21:29] 2025-10-13 10:20:54,940 | INFO     | [job] validate thread has finished
[2025-10-13 06:21:29] 2025-10-13 10:20:55,028 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 06:21:29] 2025-10-13 10:20:55,179 | INFO     | [job] control thread has finished
[2025-10-13 06:21:29] 2025-10-13 10:20:55,336 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 06:21:29] 2025-10-13 10:20:55,367 | INFO     | [payload] validate_post thread has finished
[2025-10-13 06:21:29] 2025-10-13 10:20:55,371 | INFO     | [payload] control thread has finished
[2025-10-13 06:21:29] 2025-10-13 10:20:55,441 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 06:21:29] 2025-10-13 10:20:55,604 | INFO     | [data] control thread has finished
[2025-10-13 06:21:29] 2025-10-13 10:20:55,623 | INFO     | [data] copytool_out thread has finished
[2025-10-13 06:21:29] 2025-10-13 10:20:55,641 | INFO     | [payload] failed_post thread has finished
[2025-10-13 06:21:29] 2025-10-13 10:20:55,660 | INFO     | [data] copytool_in thread has finished
[2025-10-13 06:21:29] 2025-10-13 10:20:56,057 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 06:21:29] 2025-10-13 10:20:57,623 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 06:21:29] 2025-10-13 10:21:23,223 | INFO     | PID=13755 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 06:21:29] 2025-10-13 10:21:23,224 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 06:21:29] 2025-10-13 10:21:23,224 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 06:21:29] 2025-10-13 10:21:23,224 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 06:21:29] 2025-10-13 10:21:23,792 | INFO     | [monitor] cgroup control has ended
[2025-10-13 06:21:29] 2025-10-13 10:21:24,371 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139676632991552)>', '<ExcThread(monitor, started 139675599619840)>']
[2025-10-13 06:21:29] 2025-10-13 10:21:25,235 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 06:21:29] 2025-10-13 10:21:25,235 | INFO     | [monitor] control thread has ended
[2025-10-13 06:21:29] 2025-10-13 10:21:29,396 | INFO     | all workflow threads have been joined
[2025-10-13 06:21:29] 2025-10-13 10:21:29,396 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 06:21:29] 2025-10-13 10:21:29,397 | INFO     | traces error code: 0
[2025-10-13 06:21:29] 2025-10-13 10:21:29,397 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 06:21:29] 2025-10-13 10:21:29,472 [wrapper] ==== pilot stdout END ====
[2025-10-13 06:21:29] 2025-10-13 10:21:29,476 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 06:21:29] 2025-10-13 10:21:29,479 [wrapper] pilotpid: 13755
[2025-10-13 06:21:29] 2025-10-13 10:21:29,483 [wrapper] Pilot exit status: 0
[2025-10-13 06:21:29] 2025-10-13 10:21:29,497 [wrapper] pandaids: 6841069063
[2025-10-13 06:21:29] 2025-10-13 10:21:29,537 [wrapper] cleanup supervisor_pilot 18136 13756
[2025-10-13 06:21:29] 2025-10-13 10:21:29,541 [wrapper] Test setup, not cleaning
[2025-10-13 06:21:29] 2025-10-13 10:21:29,545 [wrapper] apfmon messages muted
[2025-10-13 06:21:29] 2025-10-13 10:21:29,549 [wrapper] ==== wrapper stdout END ====
[2025-10-13 06:21:29] 2025-10-13 10:21:29,553 [wrapper] ==== wrapper stderr END ====
[2025-10-13 06:21:29]  *** Error codes and diagnostics ***
[2025-10-13 06:21:29]     "exeErrorCode": 0,
[2025-10-13 06:21:29]     "exeErrorDiag": "",
[2025-10-13 06:21:29]     "pilotErrorCode": 0,
[2025-10-13 06:21:29]     "pilotErrorDiag": "",
[2025-10-13 06:21:29]  *** Listing of results directory ***
[2025-10-13 06:21:29] total 414780
[2025-10-13 06:21:29] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 20:11 pilot3.tar.gz
[2025-10-13 06:21:29] -rwx------ 1 boincer umatlas     36292 Oct 12 20:37 runpilot2-wrapper.sh
[2025-10-13 06:21:29] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 20:37 queuedata.json
[2025-10-13 06:21:29] -rw-r--r-- 1 boincer umatlas       100 Oct 13 05:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 06:21:29] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 05:14 run_atlas
[2025-10-13 06:21:29] -rw-r--r-- 1 boincer umatlas       105 Oct 13 05:14 job.xml
[2025-10-13 06:21:29] -rw-r--r-- 2 boincer umatlas 219991849 Oct 13 05:14 EVNT.46676267._004697.pool.root.1
[2025-10-13 06:21:29] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 05:14 start_atlas.sh
[2025-10-13 06:21:29] drwxrwx--x 2 boincer umatlas      4096 Oct 13 05:14 shared
[2025-10-13 06:21:29] -rw-r--r-- 2 boincer umatlas    569676 Oct 13 05:14 input.tar.gz
[2025-10-13 06:21:29] -rw-r--r-- 1 boincer umatlas         0 Oct 13 05:14 boinc_lockfile
[2025-10-13 06:21:29] -rw-r--r-- 1 boincer umatlas      2550 Oct 13 05:14 pandaJob.out
[2025-10-13 06:21:29] -rw------- 1 boincer umatlas    972857 Oct 13 05:14 agis_schedconf.cvmfs.json
[2025-10-13 06:21:29] -rw------- 1 boincer umatlas   1560580 Oct 13 05:14 agis_ddmendpoints.agis.ALL.json
[2025-10-13 06:21:29] drwx------ 5 boincer umatlas      4096 Oct 13 05:14 pilot3
[2025-10-13 06:21:29] -rw-r--r-- 1 boincer umatlas      5952 Oct 13 06:18 init_data.xml
[2025-10-13 06:21:29] -rw------- 1 boincer umatlas 198895863 Oct 13 06:20 HITS.46676269._093272.pool.root.1
[2025-10-13 06:21:29] -rw-r--r-- 1 boincer umatlas       530 Oct 13 06:20 boinc_task_state.xml
[2025-10-13 06:21:29] -rw------- 1 boincer umatlas      1050 Oct 13 06:20 memory_monitor_summary.json
[2025-10-13 06:21:29] -rw------- 1 boincer umatlas    387883 Oct 13 06:20 log.46676269._093272.job.log.tgz.1
[2025-10-13 06:21:29] -rw------- 1 boincer umatlas      7851 Oct 13 06:20 heartbeat.json
[2025-10-13 06:21:29] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 06:21 boinc_mmap_file
[2025-10-13 06:21:29] -rw-r--r-- 1 boincer umatlas        27 Oct 13 06:21 wrapper_checkpoint.txt
[2025-10-13 06:21:29] -rw------- 1 boincer umatlas        95 Oct 13 06:21 pilot_heartbeat.json
[2025-10-13 06:21:29] -rw------- 1 boincer umatlas      4746 Oct 13 06:21 pilotlog.txt
[2025-10-13 06:21:29] -rw------- 1 boincer umatlas    587218 Oct 13 06:21 log.46676269._093272.job.log.1
[2025-10-13 06:21:29] -rw------- 1 boincer umatlas       357 Oct 13 06:21 output.list
[2025-10-13 06:21:29] -rw-r--r-- 1 boincer umatlas       620 Oct 13 06:21 runtime_log
[2025-10-13 06:21:29] -rw------- 1 boincer umatlas    993280 Oct 13 06:21 result.tar.gz
[2025-10-13 06:21:29] -rw------- 1 boincer umatlas       659 Oct 13 06:21 xd6LDmekLS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmCDmNDmglv4Oo.diag
[2025-10-13 06:21:29] -rw-r--r-- 1 boincer umatlas      8705 Oct 13 06:21 runtime_log.err
[2025-10-13 06:21:29] -rw-r--r-- 1 boincer umatlas     21945 Oct 13 06:21 stderr.txt
[2025-10-13 06:21:29] HITS file was successfully produced:
[2025-10-13 06:21:29] -rw------- 1 boincer umatlas 198895863 Oct 13 06:20 shared/HITS.pool.root.1
[2025-10-13 06:21:29]  *** Contents of shared directory: ***
[2025-10-13 06:21:29] total 410624
[2025-10-13 06:21:29] -rw-r--r-- 2 boincer umatlas 219991849 Oct 13 05:14 ATLAS.root_0
[2025-10-13 06:21:29] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 05:14 start_atlas.sh
[2025-10-13 06:21:29] -rw-r--r-- 2 boincer umatlas    569676 Oct 13 05:14 input.tar.gz
[2025-10-13 06:21:29] -rw------- 1 boincer umatlas 198895863 Oct 13 06:20 HITS.pool.root.1
[2025-10-13 06:21:29] -rw------- 1 boincer umatlas    993280 Oct 13 06:21 result.tar.gz
06:21:31 (10062): run_atlas exited; CPU time 42241.932729
06:21:31 (10062): called boinc_finish(0)

</stderr_txt>
]]>

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