Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:23:16 (20376): wrapper (7.7.26015): starting
05:23:16 (20376): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 05:23:16] Arguments: --nthreads 12
[2025-10-13 05:23:16] Threads: 12
[2025-10-13 05:23:16] Checking for CVMFS
[2025-10-13 05:23:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 05:23:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 05:23:17] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 05:23:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 05:23:17] 2.11.2.0 2924 224090 104468 151656 3 56 16531427 20275201 1 130560 4 111317015 99.984 13838682 12986 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 05:23:17] CVMFS is ok
[2025-10-13 05:23:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 05:23:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 05:23:17] Further information can be found at the LHC@home message board.
[2025-10-13 05:23:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 05:23:17] Checking for apptainer binary...
[2025-10-13 05:23:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 05:23:17] Running /usr/bin/apptainer --version
[2025-10-13 05:23:17] apptainer version 1.3.2-1.el7
[2025-10-13 05:23:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 05:23:18] c-205-28.aglt2.org
[2025-10-13 05:23:18] apptainer works
[2025-10-13 05:23:18] Set ATHENA_PROC_NUMBER=12
[2025-10-13 05:23:18] Set ATHENA_CORE_NUMBER=12
[2025-10-13 05:23:18] Starting ATLAS job with PandaID=6840969773
[2025-10-13 05:23:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 06:36:01]  *** The last 200 lines of the pilot log: ***
[2025-10-13 06:36:01]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-13 06:36:01]  replicas=None
[2025-10-13 06:36:01]  scope=mc23_13p6TeV
[2025-10-13 06:36:01]  status=None
[2025-10-13 06:36:01]  status_code=0
[2025-10-13 06:36:01]  storage_token=
[2025-10-13 06:36:01]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6840969773/log.46676269._092457.job.log.tgz.1
[2025-10-13 06:36:01]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/41/c2/log.46676269._092457.job.log.tgz.1
[2025-10-13 06:36:01]  workdir=None
[2025-10-13 06:36:01] ]
[2025-10-13 06:36:01] 2025-10-13 10:35:20,223 | INFO     | transferring file log.46676269._092457.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6840969773/log.46676269._092457.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-13 06:36:01] 2025-10-13 10:35:20,223 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6840969773/log.46676269._092457.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._092457.job
[2025-10-13 06:36:01] 2025-10-13 10:35:20,245 | INFO     | adding to output.list: log.46676269._092457.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/41/c2/log.46676269._092457.job.log.tg
[2025-10-13 06:36:01] 2025-10-13 10:35:20,246 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 06:36:01] 2025-10-13 10:35:20,246 | INFO     | summary of transferred files:
[2025-10-13 06:36:01] 2025-10-13 10:35:20,247 | INFO     |  -- lfn=log.46676269._092457.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 06:36:01] 2025-10-13 10:35:20,247 | INFO     | stage-out finished correctly
[2025-10-13 06:36:01] 2025-10-13 10:35:20,703 | INFO     | monitor loop #321: job 0:6840969773 is in state 'finished'
[2025-10-13 06:36:01] 2025-10-13 10:35:20,704 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 06:36:01] 2025-10-13 10:35:21,790 | INFO     | time since job start (4308s) is within the limit (172800.0s)
[2025-10-13 06:36:01] 2025-10-13 10:35:22,614 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 06:36:01] 2025-10-13 10:35:23,207 | INFO     | monitor loop #322: job 0:6840969773 is in state 'finished'
[2025-10-13 06:36:01] 2025-10-13 10:35:23,207 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 06:36:01] 2025-10-13 10:35:23,397 | INFO     | job 6840969773 has state=finished
[2025-10-13 06:36:01] 2025-10-13 10:35:23,398 | INFO     | preparing for final server update for job 6840969773 in state='finished'
[2025-10-13 06:36:01] 2025-10-13 10:35:23,398 | INFO     | this job has now completed (state=finished)
[2025-10-13 06:36:01] 2025-10-13 10:35:23,398 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 06:36:01] 2025-10-13 10:35:23,399 | INFO     | log transfer has been attempted: DONE
[2025-10-13 06:36:01] 2025-10-13 10:35:23,399 | INFO     | job 6840969773 has finished - writing final server update
[2025-10-13 06:36:01] 2025-10-13 10:35:23,399 | INFO     | total number of processed events: 400 (read)
[2025-10-13 06:36:01] 2025-10-13 10:35:23,400 | INFO     | executing command: lscpu
[2025-10-13 06:36:01] 2025-10-13 10:35:23,427 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 06:36:01] 2025-10-13 10:35:23,796 | INFO     | time since job start (4310s) is within the limit (172800.0s)
[2025-10-13 06:36:01] 2025-10-13 10:35:25,710 | INFO     | monitor loop #323: job 0:6840969773 is in state 'finished'
[2025-10-13 06:36:01] 2025-10-13 10:35:25,710 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 06:36:01] 2025-10-13 10:35:25,802 | INFO     | time since job start (4312s) is within the limit (172800.0s)
[2025-10-13 06:36:01] 2025-10-13 10:35:27,805 | INFO     | time since job start (4314s) is within the limit (172800.0s)
[2025-10-13 06:36:01] 2025-10-13 10:35:28,057 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-13 06:36:01] 2025-10-13 10:35:28,061 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-10-13 06:36:01] 2025-10-13 10:35:28,064 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840969773/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 06:36:01] 2025-10-13 10:35:28,065 | INFO     | extracted standard info from prmon json
[2025-10-13 06:36:01] 2025-10-13 10:35:28,065 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 06:36:01] 2025-10-13 10:35:28,065 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 06:36:01] 2025-10-13 10:35:28,065 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 06:36:01] 2025-10-13 10:35:28,065 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 06:36:01] 2025-10-13 10:35:28,067 | INFO     | fitting pss+swap vs Time
[2025-10-13 06:36:01] 2025-10-13 10:35:28,067 | INFO     | sum of square deviations: 81266640.0
[2025-10-13 06:36:01] 2025-10-13 10:35:28,067 | INFO     | sum of deviations: -6550397892.0
[2025-10-13 06:36:01] 2025-10-13 10:35:28,067 | INFO     | mean x: 1760349668.5
[2025-10-13 06:36:01] 2025-10-13 10:35:28,067 | INFO     | mean y: 2828562.875
[2025-10-13 06:36:01] 2025-10-13 10:35:28,068 | INFO     | -- intersect: 141893655570.4306
[2025-10-13 06:36:01] 2025-10-13 10:35:28,068 | INFO     | intersect: 141893655570.4306
[2025-10-13 06:36:01] 2025-10-13 10:35:28,068 | INFO     | chi2: 0.09472668695696715
[2025-10-13 06:36:01] 2025-10-13 10:35:28,068 | INFO     | -- intersect: 141893655570.4306
[2025-10-13 06:36:01] 2025-10-13 10:35:28,068 | INFO     | current memory leak: -80.60 B/s (using 64 data points, chi2=0.09)
[2025-10-13 06:36:01] 2025-10-13 10:35:28,068 | INFO     | could have reported an average CPU frequency of 2037 MHz (6 samples)
[2025-10-13 06:36:01] 2025-10-13 10:35:28,069 | INFO     | ..............................
[2025-10-13 06:36:01] 2025-10-13 10:35:28,069 | INFO     | . Timing measurements:
[2025-10-13 06:36:01] 2025-10-13 10:35:28,069 | INFO     | . get job = 0 s
[2025-10-13 06:36:01] 2025-10-13 10:35:28,069 | INFO     | . initial setup = 2 s
[2025-10-13 06:36:01] 2025-10-13 10:35:28,069 | INFO     | . payload setup = 7 s
[2025-10-13 06:36:01] 2025-10-13 10:35:28,069 | INFO     | . stage-in = 0 s
[2025-10-13 06:36:01] 2025-10-13 10:35:28,069 | INFO     | . payload execution = 4278 s
[2025-10-13 06:36:01] 2025-10-13 10:35:28,069 | INFO     | . stage-out = 0 s
[2025-10-13 06:36:01] 2025-10-13 10:35:28,069 | INFO     | . log creation = 0 s
[2025-10-13 06:36:01] 2025-10-13 10:35:28,070 | INFO     | ..............................
[2025-10-13 06:36:01] 2025-10-13 10:35:28,151 | INFO     | 
[2025-10-13 06:36:01] 2025-10-13 10:35:28,152 | INFO     | job summary report
[2025-10-13 06:36:01] 2025-10-13 10:35:28,152 | INFO     | --------------------------------------------------
[2025-10-13 06:36:01] 2025-10-13 10:35:28,152 | INFO     | PanDA job id: 6840969773
[2025-10-13 06:36:01] 2025-10-13 10:35:28,152 | INFO     | task id: 46676269
[2025-10-13 06:36:01] 2025-10-13 10:35:28,152 | INFO     | errors: (none)
[2025-10-13 06:36:01] 2025-10-13 10:35:28,153 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 06:36:01] 2025-10-13 10:35:28,153 | INFO     | pilot state: finished 
[2025-10-13 06:36:01] 2025-10-13 10:35:28,153 | INFO     | transexitcode: 0
[2025-10-13 06:36:01] 2025-10-13 10:35:28,153 | INFO     | exeerrorcode: 0
[2025-10-13 06:36:01] 2025-10-13 10:35:28,153 | INFO     | exeerrordiag: 
[2025-10-13 06:36:01] 2025-10-13 10:35:28,153 | INFO     | exitcode: 0
[2025-10-13 06:36:01] 2025-10-13 10:35:28,153 | INFO     | exitmsg: OK
[2025-10-13 06:36:01] 2025-10-13 10:35:28,153 | INFO     | cpuconsumptiontime: 44738 s
[2025-10-13 06:36:01] 2025-10-13 10:35:28,153 | INFO     | nevents: 400
[2025-10-13 06:36:01] 2025-10-13 10:35:28,153 | INFO     | neventsw: 0
[2025-10-13 06:36:01] 2025-10-13 10:35:28,154 | INFO     | pid: 30431
[2025-10-13 06:36:01] 2025-10-13 10:35:28,154 | INFO     | pgrp: 30431
[2025-10-13 06:36:01] 2025-10-13 10:35:28,154 | INFO     | corecount: 12
[2025-10-13 06:36:01] 2025-10-13 10:35:28,154 | INFO     | event service: False
[2025-10-13 06:36:01] 2025-10-13 10:35:28,154 | INFO     | sizes: {0: 2348857, 1: 2348857, 5: 2349147, 11: 2349203, 4289: 2375225, 4290: 2384406, 4293: 2384406, 4298: 2384600}
[2025-10-13 06:36:01] 2025-10-13 10:35:28,154 | INFO     | --------------------------------------------------
[2025-10-13 06:36:01] 2025-10-13 10:35:28,154 | INFO     | 
[2025-10-13 06:36:01] 2025-10-13 10:35:28,154 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 06:36:01] 2025-10-13 10:35:28,177 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 06:36:01] 2025-10-13 10:35:28,178 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 06:36:01] 2025-10-13 10:35:28,178 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 06:36:01] 2025-10-13 10:35:28,178 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 06:36:01] 2025-10-13 10:35:28,178 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 06:36:01] 2025-10-13 10:35:28,178 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 06:36:01] 2025-10-13 10:35:28,179 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 06:36:01] 2025-10-13 10:35:28,179 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 06:36:01] 2025-10-13 10:35:28,179 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 06:36:01] 2025-10-13 10:35:28,179 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 06:36:01] 2025-10-13 10:35:28,179 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 06:36:01] 2025-10-13 10:35:28,179 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 06:36:01] 2025-10-13 10:35:28,180 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 06:36:01] 2025-10-13 10:35:28,180 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 06:36:01] 2025-10-13 10:35:28,180 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 06:36:01] 2025-10-13 10:35:28,180 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 06:36:01] 2025-10-13 10:35:28,180 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 06:36:01] 2025-10-13 10:35:28,180 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 06:36:01] 2025-10-13 10:35:28,181 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 06:36:01] 2025-10-13 10:35:28,181 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 06:36:01] 2025-10-13 10:35:28,181 | INFO     | job 6840969773 has completed (purged errors)
[2025-10-13 06:36:01] 2025-10-13 10:35:28,181 | INFO     | overall cleanup function is called
[2025-10-13 06:36:01] 2025-10-13 10:35:29,188 | INFO     | --- collectZombieJob: --- 10, [30431]
[2025-10-13 06:36:01] 2025-10-13 10:35:29,189 | INFO     | zombie collector waiting for pid 30431
[2025-10-13 06:36:01] 2025-10-13 10:35:29,189 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 06:36:01] 2025-10-13 10:35:29,189 | INFO     | collected zombie processes
[2025-10-13 06:36:01] 2025-10-13 10:35:29,189 | INFO     | will attempt to kill all subprocesses of pid=30431
[2025-10-13 06:36:01] 2025-10-13 10:35:29,281 | INFO     | process IDs to be killed: [30431] (in reverse order)
[2025-10-13 06:36:01] 2025-10-13 10:35:29,331 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 06:36:01] 2025-10-13 10:35:29,331 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 06:36:01] 2025-10-13 10:35:29,335 | INFO     | did not find any defunct processes belonging to 30431
[2025-10-13 06:36:01] 2025-10-13 10:35:29,338 | INFO     | did not find any defunct processes belonging to 30431
[2025-10-13 06:36:01] 2025-10-13 10:35:29,338 | INFO     | ready for new job
[2025-10-13 06:36:01] 2025-10-13 10:35:29,338 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 06:36:01] 2025-10-13 10:35:29,339 | INFO     | ***************************************
[2025-10-13 06:36:01] 2025-10-13 10:35:29,339 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 06:36:01] 2025-10-13 10:35:29,340 | INFO     | ***************************************
[2025-10-13 06:36:01] 2025-10-13 10:35:29,340 | INFO     | 
[2025-10-13 06:36:01] 2025-10-13 10:35:29,340 | INFO     | architecture information:
[2025-10-13 06:36:01] 2025-10-13 10:35:29,341 | INFO     | executing command: cat /etc/os-release
[2025-10-13 06:36:01] 2025-10-13 10:35:29,356 | INFO     | cat /etc/os-release:
[2025-10-13 06:36:01] NAME="CentOS Linux"
[2025-10-13 06:36:01] VERSION="7 (Core)"
[2025-10-13 06:36:01] ID="centos"
[2025-10-13 06:36:01] ID_LIKE="rhel fedora"
[2025-10-13 06:36:01] VERSION_ID="7"
[2025-10-13 06:36:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 06:36:01] ANSI_COLOR="0;31"
[2025-10-13 06:36:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 06:36:01] HOME_URL="https://www.centos.org/"
[2025-10-13 06:36:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 06:36:01] 
[2025-10-13 06:36:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 06:36:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 06:36:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 06:36:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 06:36:01] 
[2025-10-13 06:36:01] 2025-10-13 10:35:29,356 | INFO     | ***************************************
[2025-10-13 06:36:01] 2025-10-13 10:35:29,859 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 06:36:01] 2025-10-13 10:35:29,874 | INFO     | sufficient remaining disk space (29380050944 B)
[2025-10-13 06:36:01] 2025-10-13 10:35:29,875 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 06:36:01] 2025-10-13 10:35:29,875 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 06:36:01] 2025-10-13 10:35:29,875 | INFO     | update_server=False
[2025-10-13 06:36:01] 2025-10-13 10:35:29,875 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 06:36:01] 2025-10-13 10:35:29,876 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:36:01] 2025-10-13 10:35:29,876 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:36:01] 2025-10-13 10:35:29,876 | INFO     | aborting loop
[2025-10-13 06:36:01] 2025-10-13 10:35:30,771 | INFO     | all data control threads have been joined
[2025-10-13 06:36:01] 2025-10-13 10:35:30,846 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 06:36:01] 2025-10-13 10:35:30,878 | INFO     | [job] job monitor thread has finished
[2025-10-13 06:36:01] 2025-10-13 10:35:30,881 | INFO     | [job] retrieve thread has finished
[2025-10-13 06:36:01] 2025-10-13 10:35:30,881 | INFO     | [job] queue monitor thread has finished
[2025-10-13 06:36:01] 2025-10-13 10:35:31,028 | INFO     | all job control threads have been joined
[2025-10-13 06:36:01] 2025-10-13 10:35:31,064 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 06:36:01] 2025-10-13 10:35:31,198 | INFO     | [job] validate thread has finished
[2025-10-13 06:36:01] 2025-10-13 10:35:31,321 | INFO     | all payload control threads have been joined
[2025-10-13 06:36:01] 2025-10-13 10:35:31,494 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 06:36:01] 2025-10-13 10:35:31,504 | INFO     | [payload] failed_post thread has finished
[2025-10-13 06:36:01] 2025-10-13 10:35:31,718 | INFO     | [payload] validate_post thread has finished
[2025-10-13 06:36:01] 2025-10-13 10:35:31,776 | INFO     | [data] control thread has finished
[2025-10-13 06:36:01] 2025-10-13 10:35:31,921 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 06:36:01] 2025-10-13 10:35:31,936 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 06:36:01] 2025-10-13 10:35:32,033 | INFO     | [job] control thread has finished
[2025-10-13 06:36:01] 2025-10-13 10:35:32,110 | INFO     | [data] copytool_in thread has finished
[2025-10-13 06:36:01] 2025-10-13 10:35:32,326 | INFO     | [payload] control thread has finished
[2025-10-13 06:36:01] 2025-10-13 10:35:32,852 | INFO     | [data] copytool_out thread has finished
[2025-10-13 06:36:01] 2025-10-13 10:35:33,205 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 06:36:01] 2025-10-13 10:35:37,211 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 06:36:01] 2025-10-13 10:35:39,856 | INFO     | [monitor] cgroup control has ended
[2025-10-13 06:36:01] 2025-10-13 10:35:40,162 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140266108524352)>', '<ExcThread(monitor, started 140265293600512)>']
[2025-10-13 06:36:01] 2025-10-13 10:35:45,187 | INFO     | all workflow threads have been joined
[2025-10-13 06:36:01] 2025-10-13 10:35:45,188 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 06:36:01] 2025-10-13 10:35:45,194 | INFO     | traces error code: 0
[2025-10-13 06:36:01] 2025-10-13 10:35:45,194 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 06:36:01] 2025-10-13 10:36:01,007 | INFO     | PID=24058 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 06:36:01] 2025-10-13 10:36:01,008 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 06:36:01] 2025-10-13 10:36:01,008 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 06:36:01] 2025-10-13 10:36:01,008 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 06:36:01] 2025-10-13 10:36:01,008 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 06:36:01] 2025-10-13 10:36:01,008 | INFO     | [monitor] control thread has ended
[2025-10-13 06:36:01] 2025-10-13 10:36:01,098 [wrapper] ==== pilot stdout END ====
[2025-10-13 06:36:01] 2025-10-13 10:36:01,102 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 06:36:01] 2025-10-13 10:36:01,106 [wrapper] pilotpid: 24058
[2025-10-13 06:36:01] 2025-10-13 10:36:01,110 [wrapper] Pilot exit status: 0
[2025-10-13 06:36:01] 2025-10-13 10:36:01,125 [wrapper] pandaids: 6840969773
[2025-10-13 06:36:01] 2025-10-13 10:36:01,165 [wrapper] cleanup supervisor_pilot 10080 24059
[2025-10-13 06:36:01] 2025-10-13 10:36:01,169 [wrapper] Test setup, not cleaning
[2025-10-13 06:36:01] 2025-10-13 10:36:01,173 [wrapper] apfmon messages muted
[2025-10-13 06:36:01] 2025-10-13 10:36:01,178 [wrapper] ==== wrapper stdout END ====
[2025-10-13 06:36:01] 2025-10-13 10:36:01,181 [wrapper] ==== wrapper stderr END ====
[2025-10-13 06:36:01]  *** Error codes and diagnostics ***
[2025-10-13 06:36:01]     "exeErrorCode": 0,
[2025-10-13 06:36:01]     "exeErrorDiag": "",
[2025-10-13 06:36:01]     "pilotErrorCode": 0,
[2025-10-13 06:36:01]     "pilotErrorDiag": "",
[2025-10-13 06:36:01]  *** Listing of results directory ***
[2025-10-13 06:36:01] total 400012
[2025-10-13 06:36:01] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 19:11 pilot3.tar.gz
[2025-10-13 06:36:01] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 19:45 queuedata.json
[2025-10-13 06:36:01] -rwx------ 1 boincer umatlas     36292 Oct 12 19:45 runpilot2-wrapper.sh
[2025-10-13 06:36:01] -rw-r--r-- 1 boincer umatlas       100 Oct 13 05:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 06:36:01] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 05:23 run_atlas
[2025-10-13 06:36:01] -rw-r--r-- 1 boincer umatlas       105 Oct 13 05:23 job.xml
[2025-10-13 06:36:01] -rw-r--r-- 2 boincer umatlas 217743070 Oct 13 05:23 EVNT.46676267._004667.pool.root.1
[2025-10-13 06:36:01] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 05:23 start_atlas.sh
[2025-10-13 06:36:01] drwxrwx--x 2 boincer umatlas      4096 Oct 13 05:23 shared
[2025-10-13 06:36:01] -rw-r--r-- 2 boincer umatlas    569684 Oct 13 05:23 input.tar.gz
[2025-10-13 06:36:01] -rw-r--r-- 1 boincer umatlas         0 Oct 13 05:23 boinc_lockfile
[2025-10-13 06:36:01] -rw-r--r-- 1 boincer umatlas      2550 Oct 13 05:23 pandaJob.out
[2025-10-13 06:36:01] -rw------- 1 boincer umatlas    972849 Oct 13 05:23 agis_schedconf.cvmfs.json
[2025-10-13 06:36:01] -rw------- 1 boincer umatlas   1560580 Oct 13 05:23 agis_ddmendpoints.agis.ALL.json
[2025-10-13 06:36:01] drwx------ 5 boincer umatlas      4096 Oct 13 05:23 pilot3
[2025-10-13 06:36:01] -rw-r--r-- 1 boincer umatlas      5953 Oct 13 06:30 init_data.xml
[2025-10-13 06:36:01] -rw------- 1 boincer umatlas 185951800 Oct 13 06:34 HITS.46676269._092457.pool.root.1
[2025-10-13 06:36:01] -rw-r--r-- 1 boincer umatlas       529 Oct 13 06:35 boinc_task_state.xml
[2025-10-13 06:36:01] -rw------- 1 boincer umatlas      1064 Oct 13 06:35 memory_monitor_summary.json
[2025-10-13 06:36:01] -rw------- 1 boincer umatlas    382831 Oct 13 06:35 log.46676269._092457.job.log.tgz.1
[2025-10-13 06:36:01] -rw------- 1 boincer umatlas      7856 Oct 13 06:35 heartbeat.json
[2025-10-13 06:36:01] -rw------- 1 boincer umatlas        95 Oct 13 06:35 pilot_heartbeat.json
[2025-10-13 06:36:01] -rw-r--r-- 1 boincer umatlas        27 Oct 13 06:35 wrapper_checkpoint.txt
[2025-10-13 06:36:01] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 06:35 boinc_mmap_file
[2025-10-13 06:36:01] -rw------- 1 boincer umatlas       745 Oct 13 06:36 pilotlog.txt
[2025-10-13 06:36:01] -rw------- 1 boincer umatlas    628283 Oct 13 06:36 log.46676269._092457.job.log.1
[2025-10-13 06:36:01] -rw------- 1 boincer umatlas       357 Oct 13 06:36 output.list
[2025-10-13 06:36:01] -rw-r--r-- 1 boincer umatlas       620 Oct 13 06:36 runtime_log
[2025-10-13 06:36:01] -rw------- 1 boincer umatlas   1034240 Oct 13 06:36 result.tar.gz
[2025-10-13 06:36:01] -rw-r--r-- 1 boincer umatlas      8705 Oct 13 06:36 runtime_log.err
[2025-10-13 06:36:01] -rw------- 1 boincer umatlas       659 Oct 13 06:36 FaMKDm6vKS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmM5lNDm5VZ3Mm.diag
[2025-10-13 06:36:01] -rw-r--r-- 1 boincer umatlas     21866 Oct 13 06:36 stderr.txt
[2025-10-13 06:36:01] HITS file was successfully produced:
[2025-10-13 06:36:01] -rw------- 1 boincer umatlas 185951800 Oct 13 06:34 shared/HITS.pool.root.1
[2025-10-13 06:36:01]  *** Contents of shared directory: ***
[2025-10-13 06:36:01] total 395824
[2025-10-13 06:36:01] -rw-r--r-- 2 boincer umatlas 217743070 Oct 13 05:23 ATLAS.root_0
[2025-10-13 06:36:01] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 05:23 start_atlas.sh
[2025-10-13 06:36:01] -rw-r--r-- 2 boincer umatlas    569684 Oct 13 05:23 input.tar.gz
[2025-10-13 06:36:01] -rw------- 1 boincer umatlas 185951800 Oct 13 06:34 HITS.pool.root.1
[2025-10-13 06:36:01] -rw------- 1 boincer umatlas   1034240 Oct 13 06:36 result.tar.gz
06:36:03 (20376): run_atlas exited; CPU time 44703.834238
06:36:03 (20376): called boinc_finish(0)

</stderr_txt>
]]>

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