Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:21:16 (2971668): wrapper (7.7.26015): starting
05:21:16 (2971668): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 05:21:16] Arguments: --nthreads 12
[2025-10-13 05:21:16] Threads: 12
[2025-10-13 05:21:16] Checking for CVMFS
[2025-10-13 05:21:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 05:21:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 05:21:16] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 05:21:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 05:21:17] 2.13.2.0 3683012 14040 145056 151656 0 188 38490568 40960000 5536 16776704 0 163443173 99.875 55116014 32597 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 05:21:17] CVMFS is ok
[2025-10-13 05:21:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 05:21:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 05:21:17] Further information can be found at the LHC@home message board.
[2025-10-13 05:21:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 05:21:17] Checking for apptainer binary...
[2025-10-13 05:21:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 05:21:17] Running /usr/bin/apptainer --version
[2025-10-13 05:21:17] apptainer version 1.4.3-1.el9
[2025-10-13 05:21:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 05:21:17] c8-7-4.aglt2.org
[2025-10-13 05:21:17] apptainer works
[2025-10-13 05:21:17] Set ATHENA_PROC_NUMBER=12
[2025-10-13 05:21:17] Set ATHENA_CORE_NUMBER=12
[2025-10-13 05:21:17] Starting ATLAS job with PandaID=6841124400
[2025-10-13 05:21:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 05:46:37]  *** The last 200 lines of the pilot log: ***
[2025-10-13 05:46:37] 2025-10-13 09:45:56,692 | INFO     | summary of transferred files:
[2025-10-13 05:46:37] 2025-10-13 09:45:56,693 | INFO     |  -- lfn=log.46676269._094308.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 05:46:37] 2025-10-13 09:45:56,693 | INFO     | stage-out finished correctly
[2025-10-13 05:46:37] 2025-10-13 09:45:56,825 | INFO     | time since job start (1473s) is within the limit (172800.0s)
[2025-10-13 05:46:37] 2025-10-13 09:45:56,825 | INFO     | 1475s have passed since pilot start - server update state is 'RUNNING'
[2025-10-13 05:46:37] 2025-10-13 09:45:58,175 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 05:46:37] 2025-10-13 09:45:58,831 | INFO     | time since job start (1475s) is within the limit (172800.0s)
[2025-10-13 05:46:37] 2025-10-13 09:45:59,892 | INFO     | job 6841124400 has state=finished
[2025-10-13 05:46:37] 2025-10-13 09:45:59,892 | INFO     | preparing for final server update for job 6841124400 in state='finished'
[2025-10-13 05:46:37] 2025-10-13 09:45:59,892 | INFO     | this job has now completed (state=finished)
[2025-10-13 05:46:37] 2025-10-13 09:45:59,892 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 05:46:37] 2025-10-13 09:45:59,893 | INFO     | log transfer has been attempted: DONE
[2025-10-13 05:46:37] 2025-10-13 09:45:59,893 | INFO     | job 6841124400 has finished - writing final server update
[2025-10-13 05:46:37] 2025-10-13 09:45:59,893 | INFO     | total number of processed events: 400 (read)
[2025-10-13 05:46:37] 2025-10-13 09:45:59,894 | INFO     | executing command: lscpu
[2025-10-13 05:46:37] 2025-10-13 09:45:59,948 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 05:46:37] 2025-10-13 09:46:00,014 | WARNING  | process 2981824 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 05:46:37] 2025-10-13 09:46:00,014 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6841124400/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 05:46:37] 2025-10-13 09:46:00,015 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6841124400/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 05:46:37] 2025-10-13 09:46:00,015 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2025-10-13 05:46:37] 2025-10-13 09:46:00,015 | WARNING  | maxPSS not found in memory monitor output
[2025-10-13 05:46:37] 2025-10-13 09:46:00,016 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 4643549 B
[2025-10-13 05:46:37] 2025-10-13 09:46:00,016 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16506 B
[2025-10-13 05:46:37] 2025-10-13 09:46:00,016 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-10-13 05:46:37] 2025-10-13 09:46:00,837 | INFO     | time since job start (1477s) is within the limit (172800.0s)
[2025-10-13 05:46:37] 2025-10-13 09:46:02,841 | INFO     | time since job start (1479s) is within the limit (172800.0s)
[2025-10-13 05:46:37] 2025-10-13 09:46:02,910 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-13 05:46:37] 2025-10-13 09:46:02,922 | INFO     | sufficient remaining disk space (167857094656 B)
[2025-10-13 05:46:37] 2025-10-13 09:46:02,923 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-10-13 05:46:37] 2025-10-13 09:46:02,924 | INFO     | size of work directory /tmp/boinchome/slots/5/PanDA_Pilot-6841124400: 4921773 B (within 2537553920 B limit)
[2025-10-13 05:46:37] 2025-10-13 09:46:02,924 | INFO     | pfn file=/tmp/boinchome/slots/5/PanDA_Pilot-6841124400/HITS.46676269._094308.pool.root.1 does not exist (skip from workdir size calculation)
[2025-10-13 05:46:37] 2025-10-13 09:46:02,924 | INFO     | total size of present files: 0 B (workdir size: 4921773 B)
[2025-10-13 05:46:37] 2025-10-13 09:46:02,924 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/5/PanDA_Pilot-6841124400/HITS.46676269._094308.pool.root.1 since it does not exist
[2025-10-13 05:46:37] 2025-10-13 09:46:02,927 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3477.887445312491
[2025-10-13 05:46:37] 2025-10-13 09:46:02,941 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6841124400/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 05:46:37] 2025-10-13 09:46:02,941 | INFO     | extracted standard info from prmon json
[2025-10-13 05:46:37] 2025-10-13 09:46:02,941 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 05:46:37] 2025-10-13 09:46:02,942 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 05:46:37] 2025-10-13 09:46:02,942 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 05:46:37] 2025-10-13 09:46:02,942 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 05:46:37] 2025-10-13 09:46:02,943 | INFO     | fitting pss+swap vs Time
[2025-10-13 05:46:37] 2025-10-13 09:46:02,943 | INFO     | sum of square deviations: 1518168.0
[2025-10-13 05:46:37] 2025-10-13 09:46:02,943 | INFO     | sum of deviations: 1170284.999999999
[2025-10-13 05:46:37] 2025-10-13 09:46:02,943 | INFO     | mean x: 1760348097.0
[2025-10-13 05:46:37] 2025-10-13 09:46:02,943 | INFO     | mean y: 2435569.7647058824
[2025-10-13 05:46:37] 2025-10-13 09:46:02,943 | INFO     | -- intersect: -1354534787.0717204
[2025-10-13 05:46:37] 2025-10-13 09:46:02,943 | INFO     | intersect: -1354534787.0717204
[2025-10-13 05:46:37] 2025-10-13 09:46:02,943 | INFO     | chi2: 0.0004497237480491645
[2025-10-13 05:46:37] 2025-10-13 09:46:02,943 | INFO     | -- intersect: -1354534787.0717204
[2025-10-13 05:46:37] 2025-10-13 09:46:02,943 | INFO     | current memory leak: 0.77 B/s (using 17 data points, chi2=0.00)
[2025-10-13 05:46:37] 2025-10-13 09:46:02,944 | INFO     | could have reported an average CPU frequency of 3473 MHz (4 samples)
[2025-10-13 05:46:37] 2025-10-13 09:46:02,944 | INFO     | ..............................
[2025-10-13 05:46:37] 2025-10-13 09:46:02,944 | INFO     | . Timing measurements:
[2025-10-13 05:46:37] 2025-10-13 09:46:02,944 | INFO     | . get job = 0 s
[2025-10-13 05:46:37] 2025-10-13 09:46:02,944 | INFO     | . initial setup = 2 s
[2025-10-13 05:46:37] 2025-10-13 09:46:02,944 | INFO     | . payload setup = 3 s
[2025-10-13 05:46:37] 2025-10-13 09:46:02,944 | INFO     | . stage-in = 0 s
[2025-10-13 05:46:37] 2025-10-13 09:46:02,944 | INFO     | . payload execution = 1451 s
[2025-10-13 05:46:37] 2025-10-13 09:46:02,944 | INFO     | . stage-out = 0 s
[2025-10-13 05:46:37] 2025-10-13 09:46:02,944 | INFO     | . log creation = 0 s
[2025-10-13 05:46:37] 2025-10-13 09:46:02,944 | INFO     | ..............................
[2025-10-13 05:46:37] 2025-10-13 09:46:02,977 | INFO     | 
[2025-10-13 05:46:37] 2025-10-13 09:46:02,978 | INFO     | job summary report
[2025-10-13 05:46:37] 2025-10-13 09:46:02,978 | INFO     | --------------------------------------------------
[2025-10-13 05:46:37] 2025-10-13 09:46:02,978 | INFO     | PanDA job id: 6841124400
[2025-10-13 05:46:37] 2025-10-13 09:46:02,978 | INFO     | task id: 46676269
[2025-10-13 05:46:37] 2025-10-13 09:46:02,978 | INFO     | errors: (none)
[2025-10-13 05:46:37] 2025-10-13 09:46:02,978 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 05:46:37] 2025-10-13 09:46:02,978 | INFO     | pilot state: finished 
[2025-10-13 05:46:37] 2025-10-13 09:46:02,978 | INFO     | transexitcode: 0
[2025-10-13 05:46:37] 2025-10-13 09:46:02,978 | INFO     | exeerrorcode: 0
[2025-10-13 05:46:37] 2025-10-13 09:46:02,979 | INFO     | exeerrordiag: 
[2025-10-13 05:46:37] 2025-10-13 09:46:02,979 | INFO     | exitcode: 0
[2025-10-13 05:46:37] 2025-10-13 09:46:02,979 | INFO     | exitmsg: OK
[2025-10-13 05:46:37] 2025-10-13 09:46:02,979 | INFO     | cpuconsumptiontime: 15473 s
[2025-10-13 05:46:37] 2025-10-13 09:46:02,979 | INFO     | nevents: 400
[2025-10-13 05:46:37] 2025-10-13 09:46:02,979 | INFO     | neventsw: 0
[2025-10-13 05:46:37] 2025-10-13 09:46:02,979 | INFO     | pid: 2981824
[2025-10-13 05:46:37] 2025-10-13 09:46:02,979 | INFO     | pgrp: 2981824
[2025-10-13 05:46:37] 2025-10-13 09:46:02,979 | INFO     | corecount: 12
[2025-10-13 05:46:37] 2025-10-13 09:46:02,979 | INFO     | event service: False
[2025-10-13 05:46:37] 2025-10-13 09:46:02,979 | INFO     | sizes: {0: 2348856, 3: 2349118, 11: 2349146, 1458: 2373880, 1460: 2382878, 1461: 2382934, 1466: 2383284}
[2025-10-13 05:46:37] 2025-10-13 09:46:02,979 | INFO     | --------------------------------------------------
[2025-10-13 05:46:37] 2025-10-13 09:46:02,979 | INFO     | 
[2025-10-13 05:46:37] 2025-10-13 09:46:02,979 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-10-13 05:46:37] 2025-10-13 09:46:02,996 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 05:46:37] 2025-10-13 09:46:02,996 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 05:46:37] 2025-10-13 09:46:02,996 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 05:46:37] 2025-10-13 09:46:02,996 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 05:46:37] 2025-10-13 09:46:02,996 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 05:46:37] 2025-10-13 09:46:02,996 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 05:46:37] 2025-10-13 09:46:02,996 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 05:46:37] 2025-10-13 09:46:02,996 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 05:46:37] 2025-10-13 09:46:02,996 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 05:46:37] 2025-10-13 09:46:02,996 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 05:46:37] 2025-10-13 09:46:02,996 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 05:46:37] 2025-10-13 09:46:02,996 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 05:46:37] 2025-10-13 09:46:02,997 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 05:46:37] 2025-10-13 09:46:02,997 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 05:46:37] 2025-10-13 09:46:02,997 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 05:46:37] 2025-10-13 09:46:02,997 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 05:46:37] 2025-10-13 09:46:02,997 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 05:46:37] 2025-10-13 09:46:02,997 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 05:46:37] 2025-10-13 09:46:02,997 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 05:46:37] 2025-10-13 09:46:02,997 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 05:46:37] 2025-10-13 09:46:02,997 | INFO     | job 6841124400 has completed (purged errors)
[2025-10-13 05:46:37] 2025-10-13 09:46:02,997 | INFO     | overall cleanup function is called
[2025-10-13 05:46:37] 2025-10-13 09:46:03,299 | INFO     | number of running child processes to parent process 2981824: 1
[2025-10-13 05:46:37] 2025-10-13 09:46:03,300 | INFO     | maximum number of monitored processes: 6
[2025-10-13 05:46:37] 2025-10-13 09:46:03,300 | INFO     | aborting job monitoring since job object (job id=6841124400) has expired
[2025-10-13 05:46:37] 2025-10-13 09:46:04,006 | INFO     | --- collectZombieJob: --- 10, [2981824]
[2025-10-13 05:46:37] 2025-10-13 09:46:04,006 | INFO     | zombie collector waiting for pid 2981824
[2025-10-13 05:46:37] 2025-10-13 09:46:04,006 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 05:46:37] 2025-10-13 09:46:04,006 | INFO     | collected zombie processes
[2025-10-13 05:46:37] 2025-10-13 09:46:04,006 | INFO     | will attempt to kill all subprocesses of pid=2981824
[2025-10-13 05:46:37] 2025-10-13 09:46:04,247 | INFO     | process IDs to be killed: [2981824] (in reverse order)
[2025-10-13 05:46:37] 2025-10-13 09:46:04,359 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 05:46:37] 2025-10-13 09:46:04,359 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 05:46:37] 2025-10-13 09:46:04,372 | INFO     | did not find any defunct processes belonging to 2981824
[2025-10-13 05:46:37] 2025-10-13 09:46:04,380 | INFO     | did not find any defunct processes belonging to 2981824
[2025-10-13 05:46:37] 2025-10-13 09:46:04,380 | INFO     | ready for new job
[2025-10-13 05:46:37] 2025-10-13 09:46:04,380 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 05:46:37] 2025-10-13 09:46:04,381 | INFO     | ***************************************
[2025-10-13 05:46:37] 2025-10-13 09:46:04,381 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 05:46:37] 2025-10-13 09:46:04,381 | INFO     | ***************************************
[2025-10-13 05:46:37] 2025-10-13 09:46:04,381 | INFO     | 
[2025-10-13 05:46:37] 2025-10-13 09:46:04,397 | INFO     | architecture information:
[2025-10-13 05:46:37] 2025-10-13 09:46:04,398 | INFO     | executing command: cat /etc/os-release
[2025-10-13 05:46:37] 2025-10-13 09:46:04,406 | INFO     | cat /etc/os-release:
[2025-10-13 05:46:37] NAME="CentOS Linux"
[2025-10-13 05:46:37] VERSION="7 (Core)"
[2025-10-13 05:46:37] ID="centos"
[2025-10-13 05:46:37] ID_LIKE="rhel fedora"
[2025-10-13 05:46:37] VERSION_ID="7"
[2025-10-13 05:46:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 05:46:37] ANSI_COLOR="0;31"
[2025-10-13 05:46:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 05:46:37] HOME_URL="https://www.centos.org/"
[2025-10-13 05:46:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 05:46:37] 
[2025-10-13 05:46:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 05:46:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 05:46:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 05:46:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 05:46:37] 
[2025-10-13 05:46:37] 2025-10-13 09:46:04,406 | INFO     | ***************************************
[2025-10-13 05:46:37] 2025-10-13 09:46:04,907 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-10-13 05:46:37] 2025-10-13 09:46:04,917 | INFO     | sufficient remaining disk space (167858143232 B)
[2025-10-13 05:46:37] 2025-10-13 09:46:04,917 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 05:46:37] 2025-10-13 09:46:04,917 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 05:46:37] 2025-10-13 09:46:04,917 | INFO     | update_server=False
[2025-10-13 05:46:37] 2025-10-13 09:46:04,917 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 05:46:37] 2025-10-13 09:46:04,917 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 05:46:37] 2025-10-13 09:46:04,918 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 05:46:37] 2025-10-13 09:46:04,918 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:46:37] 2025-10-13 09:46:04,918 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:46:37] 2025-10-13 09:46:04,919 | INFO     | aborting loop
[2025-10-13 05:46:37] 2025-10-13 09:46:05,380 | INFO     | all data control threads have been joined
[2025-10-13 05:46:37] 2025-10-13 09:46:05,922 | INFO     | [job] queue monitor thread has finished
[2025-10-13 05:46:37] 2025-10-13 09:46:05,922 | INFO     | [job] retrieve thread has finished
[2025-10-13 05:46:37] 2025-10-13 09:46:05,924 | INFO     | [job] job monitor thread has finished
[2025-10-13 05:46:37] 2025-10-13 09:46:06,052 | INFO     | [payload] validate_post thread has finished
[2025-10-13 05:46:37] 2025-10-13 09:46:06,381 | INFO     | [data] control thread has finished
[2025-10-13 05:46:37] 2025-10-13 09:46:06,381 | INFO     | all payload control threads have been joined
[2025-10-13 05:46:37] 2025-10-13 09:46:06,446 | INFO     | [job] validate thread has finished
[2025-10-13 05:46:37] 2025-10-13 09:46:06,543 | INFO     | [data] copytool_in thread has finished
[2025-10-13 05:46:37] 2025-10-13 09:46:06,575 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 05:46:37] 2025-10-13 09:46:06,604 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 05:46:37] 2025-10-13 09:46:06,610 | INFO     | all job control threads have been joined
[2025-10-13 05:46:37] 2025-10-13 09:46:06,874 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 05:46:37] 2025-10-13 09:46:06,924 | INFO     | [data] copytool_out thread has finished
[2025-10-13 05:46:37] 2025-10-13 09:46:07,099 | INFO     | [payload] failed_post thread has finished
[2025-10-13 05:46:37] 2025-10-13 09:46:07,387 | INFO     | [payload] control thread has finished
[2025-10-13 05:46:37] 2025-10-13 09:46:07,616 | INFO     | [job] control thread has finished
[2025-10-13 05:46:37] 2025-10-13 09:46:08,924 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 05:46:37] 2025-10-13 09:46:15,069 | INFO     | job.realtimelogging is not enabled
[2025-10-13 05:46:37] 2025-10-13 09:46:16,075 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 05:46:37] 2025-10-13 09:46:25,230 | INFO     | [monitor] cgroup control has ended
[2025-10-13 05:46:37] 2025-10-13 09:46:25,824 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140339605931840)>', '<ExcThread(monitor, started 140338979133184)>']
[2025-10-13 05:46:37] 2025-10-13 09:46:30,850 | INFO     | all workflow threads have been joined
[2025-10-13 05:46:37] 2025-10-13 09:46:30,850 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 05:46:37] 2025-10-13 09:46:30,850 | INFO     | traces error code: 0
[2025-10-13 05:46:37] 2025-10-13 09:46:30,850 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 05:46:37] 2025-10-13 09:46:36,235 | INFO     | PID=2975383 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 05:46:37] 2025-10-13 09:46:36,236 | INFO     | .. there are 8 such processes running
[2025-10-13 05:46:37] 2025-10-13 09:46:36,236 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 05:46:37] 2025-10-13 09:46:36,236 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 05:46:37] 2025-10-13 09:46:36,236 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 05:46:37] 2025-10-13 09:46:36,236 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 05:46:37] 2025-10-13 09:46:36,236 | INFO     | [monitor] control thread has ended
[2025-10-13 05:46:37] 2025-10-13 09:46:36,321 [wrapper] ==== pilot stdout END ====
[2025-10-13 05:46:37] 2025-10-13 09:46:36,323 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 05:46:37] 2025-10-13 09:46:36,325 [wrapper] pilotpid: 2975383
[2025-10-13 05:46:37] 2025-10-13 09:46:36,327 [wrapper] Pilot exit status: 0
[2025-10-13 05:46:37] 2025-10-13 09:46:36,334 [wrapper] pandaids: 6841124400
[2025-10-13 05:46:37] 2025-10-13 09:46:36,397 [wrapper] cleanup supervisor_pilot 3042846 2975384
[2025-10-13 05:46:37] 2025-10-13 09:46:36,399 [wrapper] Test setup, not cleaning
[2025-10-13 05:46:37] 2025-10-13 09:46:36,400 [wrapper] apfmon messages muted
[2025-10-13 05:46:37] 2025-10-13 09:46:36,402 [wrapper] ==== wrapper stdout END ====
[2025-10-13 05:46:37] 2025-10-13 09:46:36,404 [wrapper] ==== wrapper stderr END ====
[2025-10-13 05:46:37]  *** Error codes and diagnostics ***
[2025-10-13 05:46:37]     "exeErrorCode": 0,
[2025-10-13 05:46:37]     "exeErrorDiag": "",
[2025-10-13 05:46:37]     "pilotErrorCode": 0,
[2025-10-13 05:46:37]     "pilotErrorDiag": "",
[2025-10-13 05:46:37]  *** Listing of results directory ***
[2025-10-13 05:46:37] total 409040
[2025-10-13 05:46:37] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 21:18 pilot3.tar.gz
[2025-10-13 05:46:37] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 21:42 queuedata.json
[2025-10-13 05:46:37] -rwx------. 1 boincer umatlas     36292 Oct 12 21:43 runpilot2-wrapper.sh
[2025-10-13 05:46:37] -rw-r--r--. 1 boincer umatlas       100 Oct 13 05:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 05:46:37] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 05:21 run_atlas
[2025-10-13 05:46:37] -rw-r--r--. 1 boincer umatlas       105 Oct 13 05:21 job.xml
[2025-10-13 05:46:37] -rw-r--r--. 2 boincer umatlas 220272322 Oct 13 05:21 EVNT.46676267._004364.pool.root.1
[2025-10-13 05:46:37] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 05:21 start_atlas.sh
[2025-10-13 05:46:37] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 05:21 shared
[2025-10-13 05:46:37] -rw-r--r--. 2 boincer umatlas    569681 Oct 13 05:21 input.tar.gz
[2025-10-13 05:46:37] -rw-r--r--. 1 boincer umatlas         0 Oct 13 05:21 boinc_lockfile
[2025-10-13 05:46:37] -rw-r--r--. 1 boincer umatlas      2549 Oct 13 05:21 pandaJob.out
[2025-10-13 05:46:37] -rw-------. 1 boincer umatlas    972849 Oct 13 05:21 agis_schedconf.cvmfs.json
[2025-10-13 05:46:37] -rw-------. 1 boincer umatlas   1560580 Oct 13 05:21 agis_ddmendpoints.agis.ALL.json
[2025-10-13 05:46:37] drwx------. 5 boincer umatlas      4096 Oct 13 05:21 pilot3
[2025-10-13 05:46:37] -rw-r--r--. 1 boincer umatlas      7162 Oct 13 05:36 init_data.xml
[2025-10-13 05:46:37] -rw-------. 1 boincer umatlas 193476292 Oct 13 05:45 HITS.46676269._094308.pool.root.1
[2025-10-13 05:46:37] -rw-r--r--. 1 boincer umatlas       529 Oct 13 05:45 boinc_task_state.xml
[2025-10-13 05:46:37] -rw-------. 1 boincer umatlas      1029 Oct 13 05:45 memory_monitor_summary.json
[2025-10-13 05:46:37] -rw-------. 1 boincer umatlas        95 Oct 13 05:45 pilot_heartbeat.json
[2025-10-13 05:46:37] -rw-------. 1 boincer umatlas    353453 Oct 13 05:45 log.46676269._094308.job.log.tgz.1
[2025-10-13 05:46:37] -rw-------. 1 boincer umatlas      7769 Oct 13 05:46 heartbeat.json
[2025-10-13 05:46:37] -rw-r--r--. 1 boincer umatlas        27 Oct 13 05:46 wrapper_checkpoint.txt
[2025-10-13 05:46:37] -rw-------. 1 boincer umatlas       822 Oct 13 05:46 pilotlog.txt
[2025-10-13 05:46:37] -rw-------. 1 boincer umatlas    253878 Oct 13 05:46 log.46676269._094308.job.log.1
[2025-10-13 05:46:37] -rw-------. 1 boincer umatlas       357 Oct 13 05:46 output.list
[2025-10-13 05:46:37] -rw-r--r--. 1 boincer umatlas       620 Oct 13 05:46 runtime_log
[2025-10-13 05:46:37] -rw-------. 1 boincer umatlas    624640 Oct 13 05:46 result.tar.gz
[2025-10-13 05:46:37] -rw-------. 1 boincer umatlas       646 Oct 13 05:46 TnVKDmrlMS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm7OmNDmdsYYAn.diag
[2025-10-13 05:46:37] -rw-r--r--. 1 boincer umatlas      8695 Oct 13 05:46 runtime_log.err
[2025-10-13 05:46:37] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 05:46 boinc_mmap_file
[2025-10-13 05:46:37] -rw-r--r--. 1 boincer umatlas     22367 Oct 13 05:46 stderr.txt
[2025-10-13 05:46:37] HITS file was successfully produced:
[2025-10-13 05:46:37] -rw-------. 1 boincer umatlas 193476292 Oct 13 05:45 shared/HITS.pool.root.1
[2025-10-13 05:46:37]  *** Contents of shared directory: ***
[2025-10-13 05:46:37] total 405248
[2025-10-13 05:46:37] -rw-r--r--. 2 boincer umatlas 220272322 Oct 13 05:21 ATLAS.root_0
[2025-10-13 05:46:37] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 05:21 start_atlas.sh
[2025-10-13 05:46:37] -rw-r--r--. 2 boincer umatlas    569681 Oct 13 05:21 input.tar.gz
[2025-10-13 05:46:37] -rw-------. 1 boincer umatlas 193476292 Oct 13 05:45 HITS.pool.root.1
[2025-10-13 05:46:37] -rw-------. 1 boincer umatlas    624640 Oct 13 05:46 result.tar.gz
05:46:38 (2971668): run_atlas exited; CPU time 15499.439740
05:46:38 (2971668): called boinc_finish(0)

</stderr_txt>
]]>

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