Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:18:30 (3073292): wrapper (7.7.26015): starting
01:18:30 (3073292): wrapper: running run_atlas (--nthreads 6)
[2025-10-14 01:18:30] Arguments: --nthreads 6
[2025-10-14 01:18:30] Threads: 6
[2025-10-14 01:18:30] Checking for CVMFS
[2025-10-14 01:18:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-14 01:18:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-14 01:18:30] Running cvmfs_config stat atlas.cern.ch
[2025-10-14 01:18:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-14 01:18:31] 2.11.5.0 3385007 6080 99280 151667 3 57 13714020 20971520 929 130560 0 12051705 99.996 207090 14 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.35.143:3126 1
[2025-10-14 01:18:31] CVMFS is ok
[2025-10-14 01:18:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-14 01:18:31] Checking for apptainer binary...
[2025-10-14 01:18:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-14 01:18:31] Running /usr/bin/apptainer --version
[2025-10-14 01:18:31] apptainer version 1.3.6-1.el9
[2025-10-14 01:18:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-14 01:18:31] testio006
[2025-10-14 01:18:31] apptainer works
[2025-10-14 01:18:31] Set ATHENA_PROC_NUMBER=6
[2025-10-14 01:18:31] Set ATHENA_CORE_NUMBER=6
[2025-10-14 01:18:31] Starting ATLAS job with PandaID=6841242680
[2025-10-14 01:18:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-14 02:36:54]  *** The last 200 lines of the pilot log: ***
[2025-10-14 02:36:54] 2025-10-13 17:36:07,917 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/1/PanDA_Pilot-6841242680/log.46676269._094948.job.log.tgz.1 /var/lib/boinc/slots/1/log.46676269._094948.job
[2025-10-14 02:36:54] 2025-10-13 17:36:07,929 | INFO     | adding to output.list: log.46676269._094948.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/03/3a/log.46676269._094948.job.log.tg
[2025-10-14 02:36:54] 2025-10-13 17:36:07,930 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-14 02:36:54] 2025-10-13 17:36:07,930 | INFO     | summary of transferred files:
[2025-10-14 02:36:54] 2025-10-13 17:36:07,930 | INFO     |  -- lfn=log.46676269._094948.job.log.tgz.1, status_code=0, status=transferred
[2025-10-14 02:36:54] 2025-10-13 17:36:07,930 | INFO     | stage-out finished correctly
[2025-10-14 02:36:54] 2025-10-13 17:36:09,223 | INFO     | time since job start (4648s) is within the limit (172800.0s)
[2025-10-14 02:36:54] 2025-10-13 17:36:10,767 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-14 02:36:54] 2025-10-13 17:36:10,816 | INFO     | job 6841242680 has state=finished
[2025-10-14 02:36:54] 2025-10-13 17:36:10,816 | INFO     | preparing for final server update for job 6841242680 in state='finished'
[2025-10-14 02:36:54] 2025-10-13 17:36:10,817 | INFO     | this job has now completed (state=finished)
[2025-10-14 02:36:54] 2025-10-13 17:36:10,817 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-14 02:36:54] 2025-10-13 17:36:10,817 | INFO     | log transfer has been attempted: DONE
[2025-10-14 02:36:54] 2025-10-13 17:36:10,817 | INFO     | job 6841242680 has finished - writing final server update
[2025-10-14 02:36:54] 2025-10-13 17:36:10,817 | INFO     | total number of processed events: 400 (read)
[2025-10-14 02:36:54] 2025-10-13 17:36:10,818 | INFO     | executing command: lscpu
[2025-10-14 02:36:54] 2025-10-13 17:36:10,838 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-14 02:36:54] 2025-10-13 17:36:11,229 | INFO     | time since job start (4650s) is within the limit (172800.0s)
[2025-10-14 02:36:54] 2025-10-13 17:36:13,234 | INFO     | time since job start (4652s) is within the limit (172800.0s)
[2025-10-14 02:36:54] 2025-10-13 17:36:13,247 | WARNING  | process 3083861 can no longer be monitored (due to stat problems) - aborting
[2025-10-14 02:36:54] 2025-10-13 17:36:13,247 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6841242680/memory_monitor_summary.json (trf name=prmon)
[2025-10-14 02:36:54] 2025-10-13 17:36:13,248 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6841242680/memory_monitor_summary.json (trf name=prmon)
[2025-10-14 02:36:54] 2025-10-13 17:36:13,248 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2025-10-14 02:36:54] 2025-10-13 17:36:13,248 | WARNING  | maxPSS not found in memory monitor output
[2025-10-14 02:36:54] 2025-10-13 17:36:13,249 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3049571 B
[2025-10-14 02:36:54] 2025-10-13 17:36:13,249 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15783 B
[2025-10-14 02:36:54] 2025-10-13 17:36:13,249 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-10-14 02:36:54] 2025-10-13 17:36:13,615 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-14 02:36:54] 2025-10-13 17:36:13,620 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3971.3792500000004
[2025-10-14 02:36:54] 2025-10-13 17:36:13,622 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6841242680/memory_monitor_summary.json (trf name=prmon)
[2025-10-14 02:36:54] 2025-10-13 17:36:13,623 | INFO     | extracted standard info from prmon json
[2025-10-14 02:36:54] 2025-10-13 17:36:13,623 | INFO     | extracted standard memory fields from prmon json
[2025-10-14 02:36:54] 2025-10-13 17:36:13,623 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-14 02:36:54] 2025-10-13 17:36:13,623 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-14 02:36:54] 2025-10-13 17:36:13,623 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-14 02:36:54] 2025-10-13 17:36:13,624 | INFO     | fitting pss+swap vs Time
[2025-10-14 02:36:54] 2025-10-13 17:36:13,624 | INFO     | sum of square deviations: 101843770.0
[2025-10-14 02:36:54] 2025-10-13 17:36:13,624 | INFO     | sum of deviations: -6584311208.000002
[2025-10-14 02:36:54] 2025-10-13 17:36:13,624 | INFO     | mean x: 1760374740.0
[2025-10-14 02:36:54] 2025-10-13 17:36:13,625 | INFO     | mean y: 2614590.0144927534
[2025-10-14 02:36:54] 2025-10-13 17:36:13,625 | INFO     | -- intersect: 113812768425.26715
[2025-10-14 02:36:54] 2025-10-13 17:36:13,625 | INFO     | intersect: 113812768425.26715
[2025-10-14 02:36:54] 2025-10-13 17:36:13,625 | INFO     | chi2: 0.050253670976690284
[2025-10-14 02:36:54] 2025-10-13 17:36:13,625 | INFO     | sufficient remaining disk space (85723185152 B)
[2025-10-14 02:36:54] 2025-10-13 17:36:13,625 | INFO     | -- intersect: 113812768425.26715
[2025-10-14 02:36:54] 2025-10-13 17:36:13,625 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-10-14 02:36:54] 2025-10-13 17:36:13,625 | INFO     | current memory leak: -64.65 B/s (using 69 data points, chi2=0.05)
[2025-10-14 02:36:54] 2025-10-13 17:36:13,626 | INFO     | could have reported an average CPU frequency of 3974 MHz (6 samples)
[2025-10-14 02:36:54] 2025-10-13 17:36:13,626 | INFO     | ..............................
[2025-10-14 02:36:54] 2025-10-13 17:36:13,626 | INFO     | . Timing measurements:
[2025-10-14 02:36:54] 2025-10-13 17:36:13,626 | INFO     | . get job = 0 s
[2025-10-14 02:36:54] 2025-10-13 17:36:13,626 | INFO     | . initial setup = 5 s
[2025-10-14 02:36:54] 2025-10-13 17:36:13,626 | INFO     | . payload setup = 21 s
[2025-10-14 02:36:54] 2025-10-13 17:36:13,626 | INFO     | . stage-in = 0 s
[2025-10-14 02:36:54] 2025-10-13 17:36:13,626 | INFO     | . payload execution = 4606 s
[2025-10-14 02:36:54] 2025-10-13 17:36:13,626 | INFO     | . stage-out = 0 s
[2025-10-14 02:36:54] 2025-10-13 17:36:13,626 | INFO     | . log creation = 0 s
[2025-10-14 02:36:54] 2025-10-13 17:36:13,627 | INFO     | ..............................
[2025-10-14 02:36:54] 2025-10-13 17:36:13,679 | INFO     | 
[2025-10-14 02:36:54] 2025-10-13 17:36:13,679 | INFO     | job summary report
[2025-10-14 02:36:54] 2025-10-13 17:36:13,679 | INFO     | --------------------------------------------------
[2025-10-14 02:36:54] 2025-10-13 17:36:13,679 | INFO     | PanDA job id: 6841242680
[2025-10-14 02:36:54] 2025-10-13 17:36:13,679 | INFO     | task id: 46676269
[2025-10-14 02:36:54] 2025-10-13 17:36:13,679 | INFO     | errors: (none)
[2025-10-14 02:36:54] 2025-10-13 17:36:13,679 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-14 02:36:54] 2025-10-13 17:36:13,679 | INFO     | pilot state: finished 
[2025-10-14 02:36:54] 2025-10-13 17:36:13,680 | INFO     | transexitcode: 0
[2025-10-14 02:36:54] 2025-10-13 17:36:13,680 | INFO     | exeerrorcode: 0
[2025-10-14 02:36:54] 2025-10-13 17:36:13,680 | INFO     | exeerrordiag: 
[2025-10-14 02:36:54] 2025-10-13 17:36:13,680 | INFO     | exitcode: 0
[2025-10-14 02:36:54] 2025-10-13 17:36:13,680 | INFO     | exitmsg: OK
[2025-10-14 02:36:54] 2025-10-13 17:36:13,680 | INFO     | cpuconsumptiontime: 25200 s
[2025-10-14 02:36:54] 2025-10-13 17:36:13,680 | INFO     | nevents: 400
[2025-10-14 02:36:54] 2025-10-13 17:36:13,680 | INFO     | neventsw: 0
[2025-10-14 02:36:54] 2025-10-13 17:36:13,680 | INFO     | pid: 3083861
[2025-10-14 02:36:54] 2025-10-13 17:36:13,680 | INFO     | pgrp: 3083861
[2025-10-14 02:36:54] 2025-10-13 17:36:13,680 | INFO     | corecount: 6
[2025-10-14 02:36:54] 2025-10-13 17:36:13,680 | INFO     | size of work directory /var/lib/boinc/slots/1/PanDA_Pilot-6841242680: 3345459 B (within 2537553920 B limit)
[2025-10-14 02:36:54] 2025-10-13 17:36:13,680 | INFO     | event service: False
[2025-10-14 02:36:54] 2025-10-13 17:36:13,680 | INFO     | sizes: {0: 2348807, 3: 2349069, 11: 2349097, 4632: 2375294, 4633: 2384292, 4636: 2384348, 4639: 2384670}
[2025-10-14 02:36:54] 2025-10-13 17:36:13,680 | INFO     | --------------------------------------------------
[2025-10-14 02:36:54] 2025-10-13 17:36:13,681 | INFO     | pfn file=/var/lib/boinc/slots/1/PanDA_Pilot-6841242680/HITS.46676269._094948.pool.root.1 does not exist (skip from workdir size calculation)
[2025-10-14 02:36:54] 2025-10-13 17:36:13,681 | INFO     | 
[2025-10-14 02:36:54] 2025-10-13 17:36:13,681 | INFO     | total size of present files: 0 B (workdir size: 3345459 B)
[2025-10-14 02:36:54] 2025-10-13 17:36:13,681 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-10-14 02:36:54] 2025-10-13 17:36:13,681 | INFO     | output file size check: skipping output file /var/lib/boinc/slots/1/PanDA_Pilot-6841242680/HITS.46676269._094948.pool.root.1 since it does not exist
[2025-10-14 02:36:54] 2025-10-13 17:36:13,693 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-14 02:36:54] 2025-10-13 17:36:13,693 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-14 02:36:54] 2025-10-13 17:36:13,693 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-14 02:36:54] 2025-10-13 17:36:13,693 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-14 02:36:54] 2025-10-13 17:36:13,693 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-14 02:36:54] 2025-10-13 17:36:13,693 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-14 02:36:54] 2025-10-13 17:36:13,693 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-14 02:36:54] 2025-10-13 17:36:13,693 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-14 02:36:54] 2025-10-13 17:36:13,693 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-14 02:36:54] 2025-10-13 17:36:13,693 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-14 02:36:54] 2025-10-13 17:36:13,693 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-14 02:36:54] 2025-10-13 17:36:13,693 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-14 02:36:54] 2025-10-13 17:36:13,694 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-14 02:36:54] 2025-10-13 17:36:13,694 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-14 02:36:54] 2025-10-13 17:36:13,694 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-14 02:36:54] 2025-10-13 17:36:13,694 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-14 02:36:54] 2025-10-13 17:36:13,694 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-14 02:36:54] 2025-10-13 17:36:13,694 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-14 02:36:54] 2025-10-13 17:36:13,694 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-14 02:36:54] 2025-10-13 17:36:13,694 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-14 02:36:54] 2025-10-13 17:36:13,694 | INFO     | job 6841242680 has completed (purged errors)
[2025-10-14 02:36:54] 2025-10-13 17:36:13,694 | INFO     | overall cleanup function is called
[2025-10-14 02:36:54] 2025-10-13 17:36:13,765 | INFO     | number of running child processes to parent process 3083861: 1
[2025-10-14 02:36:54] 2025-10-13 17:36:13,766 | INFO     | maximum number of monitored processes: 6
[2025-10-14 02:36:54] 2025-10-13 17:36:13,766 | INFO     | aborting job monitoring since job object (job id=6841242680) has expired
[2025-10-14 02:36:54] 2025-10-13 17:36:14,701 | INFO     | --- collectZombieJob: --- 10, [3083861]
[2025-10-14 02:36:54] 2025-10-13 17:36:14,701 | INFO     | zombie collector waiting for pid 3083861
[2025-10-14 02:36:54] 2025-10-13 17:36:14,701 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-14 02:36:54] 2025-10-13 17:36:14,702 | INFO     | collected zombie processes
[2025-10-14 02:36:54] 2025-10-13 17:36:14,702 | INFO     | will attempt to kill all subprocesses of pid=3083861
[2025-10-14 02:36:54] 2025-10-13 17:36:14,766 | INFO     | process IDs to be killed: [3083861] (in reverse order)
[2025-10-14 02:36:54] 2025-10-13 17:36:14,803 | WARNING  | found no corresponding commands to process id(s)
[2025-10-14 02:36:54] 2025-10-13 17:36:14,803 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-14 02:36:54] 2025-10-13 17:36:14,806 | INFO     | did not find any defunct processes belonging to 3083861
[2025-10-14 02:36:54] 2025-10-13 17:36:14,808 | INFO     | did not find any defunct processes belonging to 3083861
[2025-10-14 02:36:54] 2025-10-13 17:36:14,808 | INFO     | ready for new job
[2025-10-14 02:36:54] 2025-10-13 17:36:14,808 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-14 02:36:54] 2025-10-13 17:36:14,809 | INFO     | ***************************************
[2025-10-14 02:36:54] 2025-10-13 17:36:14,809 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-14 02:36:54] 2025-10-13 17:36:14,809 | INFO     | ***************************************
[2025-10-14 02:36:54] 2025-10-13 17:36:14,809 | INFO     | 
[2025-10-14 02:36:54] 2025-10-13 17:36:14,810 | INFO     | architecture information:
[2025-10-14 02:36:54] 2025-10-13 17:36:14,810 | INFO     | executing command: cat /etc/os-release
[2025-10-14 02:36:54] 2025-10-13 17:36:14,821 | INFO     | cat /etc/os-release:
[2025-10-14 02:36:54] NAME="CentOS Linux"
[2025-10-14 02:36:54] VERSION="7 (Core)"
[2025-10-14 02:36:54] ID="centos"
[2025-10-14 02:36:54] ID_LIKE="rhel fedora"
[2025-10-14 02:36:54] VERSION_ID="7"
[2025-10-14 02:36:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-14 02:36:54] ANSI_COLOR="0;31"
[2025-10-14 02:36:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-14 02:36:54] HOME_URL="https://www.centos.org/"
[2025-10-14 02:36:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-14 02:36:54] 
[2025-10-14 02:36:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-14 02:36:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-14 02:36:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-14 02:36:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-14 02:36:54] 
[2025-10-14 02:36:54] 2025-10-13 17:36:14,821 | INFO     | ***************************************
[2025-10-14 02:36:54] 2025-10-13 17:36:15,324 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-10-14 02:36:54] 2025-10-13 17:36:15,334 | INFO     | sufficient remaining disk space (85728428032 B)
[2025-10-14 02:36:54] 2025-10-13 17:36:15,334 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-14 02:36:54] 2025-10-13 17:36:15,334 | INFO     | current server update state: UPDATING_FINAL
[2025-10-14 02:36:54] 2025-10-13 17:36:15,334 | INFO     | update_server=False
[2025-10-14 02:36:54] 2025-10-13 17:36:15,334 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-14 02:36:54] 2025-10-13 17:36:15,335 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-14 02:36:54] 2025-10-13 17:36:15,335 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-14 02:36:54] 2025-10-13 17:36:15,335 | INFO     | aborting loop
[2025-10-14 02:36:54] 2025-10-13 17:36:15,651 | INFO     | all data control threads have been joined
[2025-10-14 02:36:54] 2025-10-13 17:36:15,991 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-14 02:36:54] 2025-10-13 17:36:16,196 | INFO     | all payload control threads have been joined
[2025-10-14 02:36:54] 2025-10-13 17:36:16,336 | INFO     | [job] queue monitor thread has finished
[2025-10-14 02:36:54] 2025-10-13 17:36:16,340 | INFO     | [job] retrieve thread has finished
[2025-10-14 02:36:54] 2025-10-13 17:36:16,340 | INFO     | [job] job monitor thread has finished
[2025-10-14 02:36:54] 2025-10-13 17:36:16,435 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-14 02:36:54] 2025-10-13 17:36:16,656 | INFO     | [data] control thread has finished
[2025-10-14 02:36:54] 2025-10-13 17:36:16,699 | INFO     | all job control threads have been joined
[2025-10-14 02:36:54] 2025-10-13 17:36:16,821 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-14 02:36:54] 2025-10-13 17:36:17,040 | INFO     | [payload] execute_payloads thread has finished
[2025-10-14 02:36:54] 2025-10-13 17:36:17,201 | INFO     | [payload] control thread has finished
[2025-10-14 02:36:54] 2025-10-13 17:36:17,287 | INFO     | [payload] failed_post thread has finished
[2025-10-14 02:36:54] 2025-10-13 17:36:17,341 | INFO     | [job] validate thread has finished
[2025-10-14 02:36:54] 2025-10-13 17:36:17,576 | INFO     | [job] create_data_payload thread has finished
[2025-10-14 02:36:54] 2025-10-13 17:36:17,576 | INFO     | [data] copytool_in thread has finished
[2025-10-14 02:36:54] 2025-10-13 17:36:17,704 | INFO     | [job] control thread has finished
[2025-10-14 02:36:54] 2025-10-13 17:36:17,811 | INFO     | [payload] validate_pre thread has finished
[2025-10-14 02:36:54] 2025-10-13 17:36:17,829 | INFO     | [payload] validate_post thread has finished
[2025-10-14 02:36:54] 2025-10-13 17:36:17,996 | INFO     | [data] copytool_out thread has finished
[2025-10-14 02:36:54] 2025-10-13 17:36:20,826 | INFO     | [data] queue_monitor thread has finished
[2025-10-14 02:36:54] 2025-10-13 17:36:46,391 | INFO     | PID=3077103 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-14 02:36:54] 2025-10-13 17:36:46,391 | INFO     | .. there are 2 such processes running
[2025-10-14 02:36:54] 2025-10-13 17:36:46,391 | INFO     | found 0 job(s) in 20 queues
[2025-10-14 02:36:54] 2025-10-13 17:36:46,391 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-14 02:36:54] 2025-10-13 17:36:46,391 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-14 02:36:54] 2025-10-13 17:36:47,909 | INFO     | [monitor] cgroup control has ended
[2025-10-14 02:36:54] 2025-10-13 17:36:48,914 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140175499700032)>', '<ExcThread(monitor, started 140174713419520)>']
[2025-10-14 02:36:54] 2025-10-13 17:36:49,406 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-14 02:36:54] 2025-10-13 17:36:49,407 | INFO     | [monitor] control thread has ended
[2025-10-14 02:36:54] 2025-10-13 17:36:53,939 | INFO     | all workflow threads have been joined
[2025-10-14 02:36:54] 2025-10-13 17:36:53,939 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-14 02:36:54] 2025-10-13 17:36:53,939 | INFO     | traces error code: 0
[2025-10-14 02:36:54] 2025-10-13 17:36:53,939 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-14 02:36:54] 2025-10-13 17:36:54,008 [wrapper] ==== pilot stdout END ====
[2025-10-14 02:36:54] 2025-10-13 17:36:54,010 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-14 02:36:54] 2025-10-13 17:36:54,012 [wrapper] pilotpid: 3077103
[2025-10-14 02:36:54] 2025-10-13 17:36:54,013 [wrapper] Pilot exit status: 0
[2025-10-14 02:36:54] 2025-10-13 17:36:54,020 [wrapper] pandaids: 6841242680
[2025-10-14 02:36:54] 2025-10-13 17:36:54,046 [wrapper] cleanup supervisor_pilot 3120671 3077104
[2025-10-14 02:36:54] 2025-10-13 17:36:54,048 [wrapper] Test setup, not cleaning
[2025-10-14 02:36:54] 2025-10-13 17:36:54,049 [wrapper] apfmon messages muted
[2025-10-14 02:36:54] 2025-10-13 17:36:54,051 [wrapper] ==== wrapper stdout END ====
[2025-10-14 02:36:54] 2025-10-13 17:36:54,053 [wrapper] ==== wrapper stderr END ====
[2025-10-14 02:36:54]  *** Error codes and diagnostics ***
[2025-10-14 02:36:54]     "exeErrorCode": 0,
[2025-10-14 02:36:54]     "exeErrorDiag": "",
[2025-10-14 02:36:54]     "pilotErrorCode": 0,
[2025-10-14 02:36:54]     "pilotErrorDiag": "",
[2025-10-14 02:36:54]  *** Listing of results directory ***
[2025-10-14 02:36:54] total 417876
[2025-10-14 02:36:54] -rw-r--r--. 1 boinc boinc    557409 Oct 13 11:00 pilot3.tar.gz
[2025-10-14 02:36:54] -rw-r--r--. 1 boinc boinc      5112 Oct 13 11:21 queuedata.json
[2025-10-14 02:36:54] -rwx------. 1 boinc boinc     36292 Oct 13 11:22 runpilot2-wrapper.sh
[2025-10-14 02:36:54] -rw-r--r--. 1 boinc boinc       100 Oct 14 01:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-14 02:36:54] -rwxr-xr-x. 1 boinc boinc      7986 Oct 14 01:18 run_atlas
[2025-10-14 02:36:54] -rw-r--r--. 1 boinc boinc       105 Oct 14 01:18 job.xml
[2025-10-14 02:36:54] -rw-r--r--. 1 boinc boinc      9465 Oct 14 01:18 init_data.xml
[2025-10-14 02:36:54] -rw-r--r--. 2 boinc boinc 222954362 Oct 14 01:18 EVNT.46676267._002253.pool.root.1
[2025-10-14 02:36:54] -rw-r--r--. 2 boinc boinc     15120 Oct 14 01:18 start_atlas.sh
[2025-10-14 02:36:54] drwxrwx--x. 2 boinc boinc        68 Oct 14 01:18 shared
[2025-10-14 02:36:54] -rw-r--r--. 2 boinc boinc    569683 Oct 14 01:18 input.tar.gz
[2025-10-14 02:36:54] -rw-r--r--. 1 boinc boinc         0 Oct 14 01:18 boinc_lockfile
[2025-10-14 02:36:54] -rw-r--r--. 1 boinc boinc      2550 Oct 14 01:18 pandaJob.out
[2025-10-14 02:36:54] -rw-------. 1 boinc boinc    972783 Oct 14 01:18 agis_schedconf.cvmfs.json
[2025-10-14 02:36:54] -rw-------. 1 boinc boinc   1560580 Oct 14 01:18 agis_ddmendpoints.agis.ALL.json
[2025-10-14 02:36:54] drwx------. 5 boinc boinc      4096 Oct 14 01:18 pilot3
[2025-10-14 02:36:54] -rw-------. 1 boinc boinc 199086511 Oct 14 02:35 HITS.46676269._094948.pool.root.1
[2025-10-14 02:36:54] -rw-------. 1 boinc boinc      1016 Oct 14 02:36 memory_monitor_summary.json
[2025-10-14 02:36:54] -rw-r--r--. 1 boinc boinc       529 Oct 14 02:36 boinc_task_state.xml
[2025-10-14 02:36:54] -rw-------. 1 boinc boinc    300081 Oct 14 02:36 log.46676269._094948.job.log.tgz.1
[2025-10-14 02:36:54] -rw-------. 1 boinc boinc        95 Oct 14 02:36 pilot_heartbeat.json
[2025-10-14 02:36:54] -rw-------. 1 boinc boinc      7753 Oct 14 02:36 heartbeat.json
[2025-10-14 02:36:54] -rw-r--r--. 1 boinc boinc      8192 Oct 14 02:36 boinc_mmap_file
[2025-10-14 02:36:54] -rw-r--r--. 1 boinc boinc        27 Oct 14 02:36 wrapper_checkpoint.txt
[2025-10-14 02:36:54] -rw-------. 1 boinc boinc      4823 Oct 14 02:36 pilotlog.txt
[2025-10-14 02:36:54] -rw-------. 1 boinc boinc    686518 Oct 14 02:36 log.46676269._094948.job.log.1
[2025-10-14 02:36:54] -rw-------. 1 boinc boinc       357 Oct 14 02:36 output.list
[2025-10-14 02:36:54] -rw-r--r--. 1 boinc boinc       620 Oct 14 02:36 runtime_log
[2025-10-14 02:36:54] -rw-------. 1 boinc boinc   1003520 Oct 14 02:36 result.tar.gz
[2025-10-14 02:36:54] -rw-------. 1 boinc boinc       641 Oct 14 02:36 taBLDmfNNS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmeVmNDmdnwU0m.diag
[2025-10-14 02:36:54] -rw-r--r--. 1 boinc boinc      8661 Oct 14 02:36 runtime_log.err
[2025-10-14 02:36:54] -rw-r--r--. 1 boinc boinc     22321 Oct 14 02:36 stderr.txt
[2025-10-14 02:36:54] HITS file was successfully produced:
[2025-10-14 02:36:54] -rw-------. 1 boinc boinc 199086511 Oct 14 02:35 shared/HITS.pool.root.1
[2025-10-14 02:36:54]  *** Contents of shared directory: ***
[2025-10-14 02:36:54] total 413712
[2025-10-14 02:36:54] -rw-r--r--. 2 boinc boinc 222954362 Oct 14 01:18 ATLAS.root_0
[2025-10-14 02:36:54] -rw-r--r--. 2 boinc boinc     15120 Oct 14 01:18 start_atlas.sh
[2025-10-14 02:36:54] -rw-r--r--. 2 boinc boinc    569683 Oct 14 01:18 input.tar.gz
[2025-10-14 02:36:54] -rw-------. 1 boinc boinc 199086511 Oct 14 02:35 HITS.pool.root.1
[2025-10-14 02:36:54] -rw-------. 1 boinc boinc   1003520 Oct 14 02:36 result.tar.gz
02:36:55 (3073292): run_atlas exited; CPU time 25239.014423
02:36:55 (3073292): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN