Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:40:01 (2601247): wrapper (7.7.26015): starting
05:40:01 (2601247): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 05:40:01] Arguments: --nthreads 8
[2025-10-13 05:40:01] Threads: 8
[2025-10-13 05:40:01] Checking for CVMFS
[2025-10-13 05:40:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 05:40:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 05:40:02] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 05:40:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 05:40:02] 2.13.2.0 1630706 125083 172980 151656 0 687 23173177 40960000 22957 16776704 1 355390188 99.726 254132606 33860 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 05:40:02] CVMFS is ok
[2025-10-13 05:40:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 05:40:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 05:40:02] Further information can be found at the LHC@home message board.
[2025-10-13 05:40:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 05:40:02] Checking for apptainer binary...
[2025-10-13 05:40:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 05:40:02] Running /usr/bin/apptainer --version
[2025-10-13 05:40:02] apptainer version 1.4.3-1.el9
[2025-10-13 05:40:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 05:40:03] c-212-16.aglt2.org
[2025-10-13 05:40:03] apptainer works
[2025-10-13 05:40:03] Set ATHENA_PROC_NUMBER=8
[2025-10-13 05:40:03] Set ATHENA_CORE_NUMBER=8
[2025-10-13 05:40:03] Starting ATLAS job with PandaID=6830778272
[2025-10-13 05:40:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 07:32:46]  *** The last 200 lines of the pilot log: ***
[2025-10-13 07:32:46] 2025-10-13 11:31:52,671 | INFO     | sum of square deviations: 401533110.0
[2025-10-13 07:32:46] 2025-10-13 11:31:52,676 | INFO     | sum of deviations: 15363298532.999998
[2025-10-13 07:32:46] 2025-10-13 11:31:52,676 | INFO     | mean x: 1760351761.0
[2025-10-13 07:32:46] 2025-10-13 11:31:52,676 | INFO     | mean y: 2460462.788990826
[2025-10-13 07:32:46] 2025-10-13 11:31:52,677 | INFO     | -- intersect: -67351411369.4374
[2025-10-13 07:32:46] 2025-10-13 11:31:52,677 | INFO     | intersect: -67351411369.4374
[2025-10-13 07:32:46] 2025-10-13 11:31:52,677 | INFO     | chi2: 1.724427691732403
[2025-10-13 07:32:46] 2025-10-13 11:31:52,677 | INFO     | sum of square deviations: 348769330.0
[2025-10-13 07:32:46] 2025-10-13 11:31:52,678 | INFO     | sum of deviations: 14743192876.5
[2025-10-13 07:32:46] 2025-10-13 11:31:52,678 | INFO     | mean x: 1760351608.5
[2025-10-13 07:32:46] 2025-10-13 11:31:52,678 | INFO     | mean y: 2458668.721153846
[2025-10-13 07:32:46] 2025-10-13 11:31:52,678 | INFO     | -- intersect: -74411204065.24835
[2025-10-13 07:32:46] 2025-10-13 11:31:52,678 | INFO     | intersect: -74411204065.24835
[2025-10-13 07:32:46] 2025-10-13 11:31:52,678 | INFO     | chi2: 1.727864322615074
[2025-10-13 07:32:46] 2025-10-13 11:31:52,678 | INFO     | current chi2=1.727864322615074 (change=-0.19929109809286713 %)
[2025-10-13 07:32:46] 2025-10-13 11:31:52,678 | INFO     | right removable region: 103
[2025-10-13 07:32:46] 2025-10-13 11:31:52,678 | INFO     | sum of square deviations: 348769330.0
[2025-10-13 07:32:46] 2025-10-13 11:31:52,679 | INFO     | sum of deviations: -3093431572.999999
[2025-10-13 07:32:46] 2025-10-13 11:31:52,679 | INFO     | mean x: 1760351913.5
[2025-10-13 07:32:46] 2025-10-13 11:31:52,679 | INFO     | mean y: 2512853.826923077
[2025-10-13 07:32:46] 2025-10-13 11:31:52,679 | INFO     | -- intersect: 15616065194.601448
[2025-10-13 07:32:46] 2025-10-13 11:31:52,679 | INFO     | intersect: 15616065194.601448
[2025-10-13 07:32:46] 2025-10-13 11:31:52,679 | INFO     | chi2: 0.044385787550941
[2025-10-13 07:32:46] 2025-10-13 11:31:52,679 | INFO     | current chi2=0.044385787550941 (change=97.42605690202353 %)
[2025-10-13 07:32:46] 2025-10-13 11:31:52,680 | INFO     | sum of square deviations: 300842850.0
[2025-10-13 07:32:46] 2025-10-13 11:31:52,690 | INFO     | sum of deviations: -4328107624.0
[2025-10-13 07:32:46] 2025-10-13 11:31:52,696 | INFO     | mean x: 1760352066.0
[2025-10-13 07:32:46] 2025-10-13 11:31:52,696 | INFO     | mean y: 2516609.212121212
[2025-10-13 07:32:46] 2025-10-13 11:31:52,696 | INFO     | -- intersect: 25328008631.97002
[2025-10-13 07:32:46] 2025-10-13 11:31:52,696 | INFO     | intersect: 25328008631.97002
[2025-10-13 07:32:46] 2025-10-13 11:31:52,696 | INFO     | chi2: 0.018581885078833214
[2025-10-13 07:32:46] 2025-10-13 11:31:52,696 | INFO     | current chi2=0.018581885078833214 (change=58.13550664724148 %)
[2025-10-13 07:32:46] 2025-10-13 11:31:52,697 | INFO     | sum of square deviations: 257521107.5
[2025-10-13 07:32:46] 2025-10-13 11:31:52,697 | INFO     | sum of deviations: -3158276860.5
[2025-10-13 07:32:46] 2025-10-13 11:31:52,697 | INFO     | mean x: 1760352218.5
[2025-10-13 07:32:46] 2025-10-13 11:31:52,697 | INFO     | mean y: 2512476.1170212766
[2025-10-13 07:32:46] 2025-10-13 11:31:52,697 | INFO     | -- intersect: 21591731829.790348
[2025-10-13 07:32:46] 2025-10-13 11:31:52,697 | INFO     | intersect: 21591731829.790348
[2025-10-13 07:32:46] 2025-10-13 11:31:52,697 | INFO     | chi2: 0.017311097375859934
[2025-10-13 07:32:46] 2025-10-13 11:31:52,698 | INFO     | current chi2=0.017311097375859934 (change=6.83885245001781 %)
[2025-10-13 07:32:46] 2025-10-13 11:31:52,698 | INFO     | left removable region: 30
[2025-10-13 07:32:46] 2025-10-13 11:31:52,698 | INFO     | sum of square deviations: 120605052.0
[2025-10-13 07:32:46] 2025-10-13 11:31:52,698 | INFO     | sum of deviations: 402053439.99999994
[2025-10-13 07:32:46] 2025-10-13 11:31:52,698 | INFO     | mean x: 1760352493.0
[2025-10-13 07:32:46] 2025-10-13 11:31:52,698 | INFO     | mean y: 2497046.7534246575
[2025-10-13 07:32:46] 2025-10-13 11:31:52,698 | INFO     | -- intersect: -5865878810.530114
[2025-10-13 07:32:46] 2025-10-13 11:31:52,698 | INFO     | intersect: -5865878810.530114
[2025-10-13 07:32:46] 2025-10-13 11:31:52,698 | INFO     | chi2: 0.0005137921717537276
[2025-10-13 07:32:46] 2025-10-13 11:31:52,699 | INFO     | -- intersect: -5865878810.530114
[2025-10-13 07:32:46] 2025-10-13 11:31:52,699 | INFO     | current memory leak: 3.33 B/s (using 73 data points, chi2=0.00)
[2025-10-13 07:32:46] 2025-10-13 11:31:52,699 | INFO     | could have reported an average CPU frequency of 3173 MHz (7 samples)
[2025-10-13 07:32:46] 2025-10-13 11:31:52,699 | INFO     | ..............................
[2025-10-13 07:32:46] 2025-10-13 11:31:52,699 | INFO     | . Timing measurements:
[2025-10-13 07:32:46] 2025-10-13 11:31:52,699 | INFO     | . get job = 0 s
[2025-10-13 07:32:46] 2025-10-13 11:31:52,699 | INFO     | . initial setup = 2 s
[2025-10-13 07:32:46] 2025-10-13 11:31:52,699 | INFO     | . payload setup = 11 s
[2025-10-13 07:32:46] 2025-10-13 11:31:52,699 | INFO     | . stage-in = 0 s
[2025-10-13 07:32:46] 2025-10-13 11:31:52,700 | INFO     | . payload execution = 6638 s
[2025-10-13 07:32:46] 2025-10-13 11:31:52,700 | INFO     | . stage-out = 1 s
[2025-10-13 07:32:46] 2025-10-13 11:31:52,700 | INFO     | . log creation = 0 s
[2025-10-13 07:32:46] 2025-10-13 11:31:52,720 | INFO     | ..............................
[2025-10-13 07:32:46] 2025-10-13 11:31:52,785 | INFO     | time since job start (6683s) is within the limit (172800.0s)
[2025-10-13 07:32:46] 2025-10-13 11:31:52,842 | INFO     | 
[2025-10-13 07:32:46] 2025-10-13 11:31:52,862 | INFO     | job summary report
[2025-10-13 07:32:46] 2025-10-13 11:31:52,862 | INFO     | --------------------------------------------------
[2025-10-13 07:32:46] 2025-10-13 11:31:52,862 | INFO     | PanDA job id: 6830778272
[2025-10-13 07:32:46] 2025-10-13 11:31:52,862 | INFO     | task id: 46376905
[2025-10-13 07:32:46] 2025-10-13 11:31:52,862 | INFO     | errors: (none)
[2025-10-13 07:32:46] 2025-10-13 11:31:52,862 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 07:32:46] 2025-10-13 11:31:52,863 | INFO     | pilot state: finished 
[2025-10-13 07:32:46] 2025-10-13 11:31:52,863 | INFO     | transexitcode: 0
[2025-10-13 07:32:46] 2025-10-13 11:31:52,863 | INFO     | exeerrorcode: 0
[2025-10-13 07:32:46] 2025-10-13 11:31:52,863 | INFO     | exeerrordiag: 
[2025-10-13 07:32:46] 2025-10-13 11:31:52,863 | INFO     | exitcode: 0
[2025-10-13 07:32:46] 2025-10-13 11:31:52,863 | INFO     | exitmsg: OK
[2025-10-13 07:32:46] 2025-10-13 11:31:52,863 | INFO     | cpuconsumptiontime: 28555 s
[2025-10-13 07:32:46] 2025-10-13 11:31:52,863 | INFO     | nevents: 400
[2025-10-13 07:32:46] 2025-10-13 11:31:52,863 | INFO     | neventsw: 0
[2025-10-13 07:32:46] 2025-10-13 11:31:52,863 | INFO     | pid: 2619946
[2025-10-13 07:32:46] 2025-10-13 11:31:52,863 | INFO     | pgrp: 2619946
[2025-10-13 07:32:46] 2025-10-13 11:31:52,863 | INFO     | corecount: 8
[2025-10-13 07:32:46] 2025-10-13 11:31:52,863 | INFO     | event service: False
[2025-10-13 07:32:46] 2025-10-13 11:31:52,863 | INFO     | sizes: {0: 2348594, 1: 2348793, 9: 2349055, 11: 2349083, 6653: 2376082, 6654: 2385264, 6665: 2385402}
[2025-10-13 07:32:46] 2025-10-13 11:31:52,863 | INFO     | --------------------------------------------------
[2025-10-13 07:32:46] 2025-10-13 11:31:52,864 | INFO     | 
[2025-10-13 07:32:46] 2025-10-13 11:31:52,864 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-10-13 07:32:46] 2025-10-13 11:31:52,919 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 07:32:46] 2025-10-13 11:31:52,920 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 07:32:46] 2025-10-13 11:31:52,920 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 07:32:46] 2025-10-13 11:31:52,920 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 07:32:46] 2025-10-13 11:31:52,920 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 07:32:46] 2025-10-13 11:31:52,920 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 07:32:46] 2025-10-13 11:31:52,920 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 07:32:46] 2025-10-13 11:31:52,920 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 07:32:46] 2025-10-13 11:31:52,920 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 07:32:46] 2025-10-13 11:31:52,921 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 07:32:46] 2025-10-13 11:31:52,921 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 07:32:46] 2025-10-13 11:31:52,934 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 07:32:46] 2025-10-13 11:31:52,934 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 07:32:46] 2025-10-13 11:31:52,934 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 07:32:46] 2025-10-13 11:31:52,934 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 07:32:46] 2025-10-13 11:31:52,934 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 07:32:46] 2025-10-13 11:31:52,934 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 07:32:46] 2025-10-13 11:31:52,935 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 07:32:46] 2025-10-13 11:31:52,935 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 07:32:46] 2025-10-13 11:31:52,935 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 07:32:46] 2025-10-13 11:31:52,935 | INFO     | job 6830778272 has completed (purged errors)
[2025-10-13 07:32:46] 2025-10-13 11:31:52,935 | INFO     | overall cleanup function is called
[2025-10-13 07:32:46] 2025-10-13 11:31:53,967 | INFO     | --- collectZombieJob: --- 10, [2619946]
[2025-10-13 07:32:46] 2025-10-13 11:31:53,967 | INFO     | zombie collector waiting for pid 2619946
[2025-10-13 07:32:46] 2025-10-13 11:31:53,967 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 07:32:46] 2025-10-13 11:31:53,967 | INFO     | collected zombie processes
[2025-10-13 07:32:46] 2025-10-13 11:31:53,967 | INFO     | will attempt to kill all subprocesses of pid=2619946
[2025-10-13 07:32:46] 2025-10-13 11:31:54,332 | INFO     | process IDs to be killed: [2619946] (in reverse order)
[2025-10-13 07:32:46] 2025-10-13 11:31:54,475 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 07:32:46] 2025-10-13 11:31:54,476 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 07:32:46] 2025-10-13 11:31:54,491 | INFO     | did not find any defunct processes belonging to 2619946
[2025-10-13 07:32:46] 2025-10-13 11:31:54,506 | INFO     | did not find any defunct processes belonging to 2619946
[2025-10-13 07:32:46] 2025-10-13 11:31:54,506 | INFO     | ready for new job
[2025-10-13 07:32:46] 2025-10-13 11:31:54,507 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 07:32:46] 2025-10-13 11:31:54,508 | INFO     | ***************************************
[2025-10-13 07:32:46] 2025-10-13 11:31:54,508 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-13 07:32:46] 2025-10-13 11:31:54,508 | INFO     | ***************************************
[2025-10-13 07:32:46] 2025-10-13 11:31:54,508 | INFO     | 
[2025-10-13 07:32:46] 2025-10-13 11:31:54,513 | INFO     | architecture information:
[2025-10-13 07:32:46] 2025-10-13 11:31:54,514 | INFO     | executing command: cat /etc/os-release
[2025-10-13 07:32:46] 2025-10-13 11:31:54,542 | INFO     | cat /etc/os-release:
[2025-10-13 07:32:46] NAME="CentOS Linux"
[2025-10-13 07:32:46] VERSION="7 (Core)"
[2025-10-13 07:32:46] ID="centos"
[2025-10-13 07:32:46] ID_LIKE="rhel fedora"
[2025-10-13 07:32:46] VERSION_ID="7"
[2025-10-13 07:32:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 07:32:46] ANSI_COLOR="0;31"
[2025-10-13 07:32:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 07:32:46] HOME_URL="https://www.centos.org/"
[2025-10-13 07:32:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 07:32:46] 
[2025-10-13 07:32:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 07:32:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 07:32:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 07:32:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 07:32:46] 
[2025-10-13 07:32:46] 2025-10-13 11:31:54,542 | INFO     | ***************************************
[2025-10-13 07:32:46] 2025-10-13 11:31:55,045 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-10-13 07:32:46] 2025-10-13 11:31:55,086 | INFO     | sufficient remaining disk space (127167102976 B)
[2025-10-13 07:32:46] 2025-10-13 11:31:55,087 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 07:32:46] 2025-10-13 11:31:55,087 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 07:32:46] 2025-10-13 11:31:55,087 | INFO     | update_server=False
[2025-10-13 07:32:46] 2025-10-13 11:31:55,087 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 07:32:46] 2025-10-13 11:31:55,137 | INFO     | all payload control threads have been joined
[2025-10-13 07:32:46] 2025-10-13 11:31:55,384 | INFO     | all job control threads have been joined
[2025-10-13 07:32:46] 2025-10-13 11:31:55,407 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 07:32:46] 2025-10-13 11:31:55,407 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 07:32:46] 2025-10-13 11:31:55,407 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:32:46] 2025-10-13 11:31:55,407 | INFO     | will abort loop
[2025-10-13 07:32:46] 2025-10-13 11:31:55,481 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 07:32:46] 2025-10-13 11:31:56,074 | INFO     | all data control threads have been joined
[2025-10-13 07:32:46] 2025-10-13 11:31:56,093 | INFO     | [job] retrieve thread has finished
[2025-10-13 07:32:46] 2025-10-13 11:31:56,143 | INFO     | [payload] control thread has finished
[2025-10-13 07:32:46] 2025-10-13 11:31:56,200 | INFO     | [payload] failed_post thread has finished
[2025-10-13 07:32:46] 2025-10-13 11:31:56,321 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 07:32:46] 2025-10-13 11:31:56,389 | INFO     | [job] control thread has finished
[2025-10-13 07:32:46] 2025-10-13 11:31:56,412 | INFO     | [job] job monitor thread has finished
[2025-10-13 07:32:46] 2025-10-13 11:31:56,626 | INFO     | [job] validate thread has finished
[2025-10-13 07:32:46] 2025-10-13 11:31:56,665 | INFO     | [payload] validate_post thread has finished
[2025-10-13 07:32:46] 2025-10-13 11:31:56,748 | INFO     | [data] copytool_in thread has finished
[2025-10-13 07:32:46] 2025-10-13 11:31:56,806 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 07:32:46] 2025-10-13 11:31:57,081 | INFO     | [data] control thread has finished
[2025-10-13 07:32:46] 2025-10-13 11:31:57,184 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 07:32:46] 2025-10-13 11:31:57,488 | INFO     | [data] copytool_out thread has finished
[2025-10-13 07:32:46] 2025-10-13 11:31:57,558 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 07:32:46] 2025-10-13 11:31:57,855 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:32:46] 2025-10-13 11:31:58,860 | INFO     | [job] queue monitor thread has finished
[2025-10-13 07:32:46] 2025-10-13 11:32:01,566 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 07:32:46] 2025-10-13 11:32:05,501 | INFO     | job.realtimelogging is not enabled
[2025-10-13 07:32:46] 2025-10-13 11:32:06,507 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 07:32:46] 2025-10-13 11:32:26,303 | INFO     | PID=2607195 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 07:32:46] 2025-10-13 11:32:26,303 | INFO     | .. there are 20 such processes running
[2025-10-13 07:32:46] 2025-10-13 11:32:26,304 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 07:32:46] 2025-10-13 11:32:26,304 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 07:32:46] 2025-10-13 11:32:26,304 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 07:32:46] 2025-10-13 11:32:39,820 | INFO     | [monitor] cgroup control has ended
[2025-10-13 07:32:46] 2025-10-13 11:32:40,801 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140177170581312)>', '<ExcThread(monitor, started 140176240137984)>']
[2025-10-13 07:32:46] 2025-10-13 11:32:41,392 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 07:32:46] 2025-10-13 11:32:41,392 | INFO     | [monitor] control thread has ended
[2025-10-13 07:32:46] 2025-10-13 11:32:45,827 | INFO     | all workflow threads have been joined
[2025-10-13 07:32:46] 2025-10-13 11:32:45,827 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 07:32:46] 2025-10-13 11:32:45,828 | INFO     | traces error code: 0
[2025-10-13 07:32:46] 2025-10-13 11:32:45,828 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 07:32:46] 2025-10-13 11:32:46,101 [wrapper] ==== pilot stdout END ====
[2025-10-13 07:32:46] 2025-10-13 11:32:46,121 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 07:32:46] 2025-10-13 11:32:46,152 [wrapper] pilotpid: 2607195
[2025-10-13 07:32:46] 2025-10-13 11:32:46,170 [wrapper] Pilot exit status: 0
[2025-10-13 07:32:46] 2025-10-13 11:32:46,231 [wrapper] pandaids: 6830778272
[2025-10-13 07:32:46] 2025-10-13 11:32:46,306 [wrapper] cleanup supervisor_pilot 2836937 2607196
[2025-10-13 07:32:46] 2025-10-13 11:32:46,308 [wrapper] Test setup, not cleaning
[2025-10-13 07:32:46] 2025-10-13 11:32:46,310 [wrapper] apfmon messages muted
[2025-10-13 07:32:46] 2025-10-13 11:32:46,312 [wrapper] ==== wrapper stdout END ====
[2025-10-13 07:32:46] 2025-10-13 11:32:46,314 [wrapper] ==== wrapper stderr END ====
[2025-10-13 07:32:46]  *** Error codes and diagnostics ***
[2025-10-13 07:32:46]     "exeErrorCode": 0,
[2025-10-13 07:32:46]     "exeErrorDiag": "",
[2025-10-13 07:32:46]     "pilotErrorCode": 0,
[2025-10-13 07:32:46]     "pilotErrorDiag": "",
[2025-10-13 07:32:46]  *** Listing of results directory ***
[2025-10-13 07:32:46] total 386004
[2025-10-13 07:32:46] -rw-r--r--. 1 boincer umatlas    552446 Oct  4 23:07 pilot3.tar.gz
[2025-10-13 07:32:46] -rw-r--r--. 1 boincer umatlas      5112 Oct  4 23:12 queuedata.json
[2025-10-13 07:32:46] -rwx------. 1 boincer umatlas     36292 Oct  4 23:14 runpilot2-wrapper.sh
[2025-10-13 07:32:46] -rw-r--r--. 1 boincer umatlas       100 Oct 13 05:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 07:32:46] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 05:40 run_atlas
[2025-10-13 07:32:46] -rw-r--r--. 1 boincer umatlas       105 Oct 13 05:40 job.xml
[2025-10-13 07:32:46] -rw-r--r--. 2 boincer umatlas 213127859 Oct 13 05:40 EVNT.46376901._002722.pool.root.1
[2025-10-13 07:32:46] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 05:40 start_atlas.sh
[2025-10-13 07:32:46] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 05:40 shared
[2025-10-13 07:32:46] -rw-r--r--. 2 boincer umatlas    565600 Oct 13 05:40 input.tar.gz
[2025-10-13 07:32:46] -rw-r--r--. 1 boincer umatlas         0 Oct 13 05:40 boinc_lockfile
[2025-10-13 07:32:46] -rw-r--r--. 1 boincer umatlas      2518 Oct 13 05:40 pandaJob.out
[2025-10-13 07:32:46] -rw-------. 1 boincer umatlas    972849 Oct 13 05:40 agis_schedconf.cvmfs.json
[2025-10-13 07:32:46] -rw-------. 1 boincer umatlas   1560580 Oct 13 05:40 agis_ddmendpoints.agis.ALL.json
[2025-10-13 07:32:46] drwx------. 4 boincer umatlas      4096 Oct 13 05:40 pilot3
[2025-10-13 07:32:46] -rw-r--r--. 1 boincer umatlas      6945 Oct 13 07:28 init_data.xml
[2025-10-13 07:32:46] -rw-------. 1 boincer umatlas 175630516 Oct 13 07:31 HITS.46376905._074629.pool.root.1
[2025-10-13 07:32:46] -rw-r--r--. 1 boincer umatlas       529 Oct 13 07:31 boinc_task_state.xml
[2025-10-13 07:32:46] -rw-------. 1 boincer umatlas      1029 Oct 13 07:31 memory_monitor_summary.json
[2025-10-13 07:32:46] -rw-------. 1 boincer umatlas    367460 Oct 13 07:31 log.46376905._074629.job.log.tgz.1
[2025-10-13 07:32:46] -rw-------. 1 boincer umatlas      7772 Oct 13 07:31 heartbeat.json
[2025-10-13 07:32:46] -rw-------. 1 boincer umatlas        95 Oct 13 07:32 pilot_heartbeat.json
[2025-10-13 07:32:46] -rw-------. 1 boincer umatlas      5083 Oct 13 07:32 pilotlog.txt
[2025-10-13 07:32:46] -rw-r--r--. 1 boincer umatlas        27 Oct 13 07:32 wrapper_checkpoint.txt
[2025-10-13 07:32:46] -rw-------. 1 boincer umatlas    941850 Oct 13 07:32 log.46376905._074629.job.log.1
[2025-10-13 07:32:46] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 07:32 boinc_mmap_file
[2025-10-13 07:32:46] -rw-------. 1 boincer umatlas       357 Oct 13 07:32 output.list
[2025-10-13 07:32:46] -rw-r--r--. 1 boincer umatlas       620 Oct 13 07:32 runtime_log
[2025-10-13 07:32:46] -rw-------. 1 boincer umatlas   1331200 Oct 13 07:32 result.tar.gz
[2025-10-13 07:32:46] -rw-r--r--. 1 boincer umatlas      8703 Oct 13 07:32 runtime_log.err
[2025-10-13 07:32:46] -rw-------. 1 boincer umatlas       655 Oct 13 07:32 3fxKDm9NUP8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmSlNNDmBGknXn.diag
[2025-10-13 07:32:46] -rw-r--r--. 1 boincer umatlas     20943 Oct 13 07:32 stderr.txt
[2025-10-13 07:32:46] HITS file was successfully produced:
[2025-10-13 07:32:46] -rw-------. 1 boincer umatlas 175630516 Oct 13 07:31 shared/HITS.pool.root.1
[2025-10-13 07:32:46]  *** Contents of shared directory: ***
[2025-10-13 07:32:46] total 381532
[2025-10-13 07:32:46] -rw-r--r--. 2 boincer umatlas 213127859 Oct 13 05:40 ATLAS.root_0
[2025-10-13 07:32:46] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 05:40 start_atlas.sh
[2025-10-13 07:32:46] -rw-r--r--. 2 boincer umatlas    565600 Oct 13 05:40 input.tar.gz
[2025-10-13 07:32:46] -rw-------. 1 boincer umatlas 175630516 Oct 13 07:31 HITS.pool.root.1
[2025-10-13 07:32:46] -rw-------. 1 boincer umatlas   1331200 Oct 13 07:32 result.tar.gz
07:32:48 (2601247): run_atlas exited; CPU time 28725.457606
07:32:48 (2601247): called boinc_finish(0)

</stderr_txt>
]]>

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