Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:10:28 (18498): wrapper (7.7.26015): starting
05:10:28 (18498): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 05:10:28] Arguments: --nthreads 12
[2025-10-13 05:10:28] Threads: 12
[2025-10-13 05:10:28] Checking for CVMFS
[2025-10-13 05:10:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 05:10:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 05:10:28] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 05:10:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 05:10:29] 2.11.2.0 28623 216748 103512 151654 0 59 16009604 20275200 1 130560 4 108779801 99.984 12150632 11870 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 05:10:29] CVMFS is ok
[2025-10-13 05:10:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 05:10:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 05:10:29] Further information can be found at the LHC@home message board.
[2025-10-13 05:10:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 05:10:29] Checking for apptainer binary...
[2025-10-13 05:10:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 05:10:29] Running /usr/bin/apptainer --version
[2025-10-13 05:10:29] apptainer version 1.3.2-1.el7
[2025-10-13 05:10:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 05:10:30] c-205-20.aglt2.org
[2025-10-13 05:10:30] apptainer works
[2025-10-13 05:10:30] Set ATHENA_PROC_NUMBER=12
[2025-10-13 05:10:30] Set ATHENA_CORE_NUMBER=12
[2025-10-13 05:10:30] Starting ATLAS job with PandaID=6841125938
[2025-10-13 05:10:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 06:24:57]  *** The last 200 lines of the pilot log: ***
[2025-10-13 06:24:57]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-13 06:24:57]  replicas=None
[2025-10-13 06:24:57]  scope=mc23_13p6TeV
[2025-10-13 06:24:57]  status=None
[2025-10-13 06:24:57]  status_code=0
[2025-10-13 06:24:57]  storage_token=
[2025-10-13 06:24:57]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6841125938/log.46676269._094711.job.log.tgz.1
[2025-10-13 06:24:57]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/aa/af/log.46676269._094711.job.log.tgz.1
[2025-10-13 06:24:57]  workdir=None
[2025-10-13 06:24:57] ]
[2025-10-13 06:24:57] 2025-10-13 10:23:53,527 | INFO     | transferring file log.46676269._094711.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6841125938/log.46676269._094711.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-13 06:24:57] 2025-10-13 10:23:53,527 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6841125938/log.46676269._094711.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._094711.job
[2025-10-13 06:24:57] 2025-10-13 10:23:53,549 | INFO     | adding to output.list: log.46676269._094711.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/aa/af/log.46676269._094711.job.log.tg
[2025-10-13 06:24:57] 2025-10-13 10:23:53,550 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 06:24:57] 2025-10-13 10:23:53,551 | INFO     | summary of transferred files:
[2025-10-13 06:24:57] 2025-10-13 10:23:53,551 | INFO     |  -- lfn=log.46676269._094711.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 06:24:57] 2025-10-13 10:23:53,551 | INFO     | stage-out finished correctly
[2025-10-13 06:24:57] 2025-10-13 10:23:54,927 | INFO     | time since job start (4389s) is within the limit (172800.0s)
[2025-10-13 06:24:57] 2025-10-13 10:23:55,149 | INFO     | monitor loop #328: job 0:6841125938 is in state 'finished'
[2025-10-13 06:24:57] 2025-10-13 10:23:55,149 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 06:24:57] 2025-10-13 10:23:55,481 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 06:24:57] 2025-10-13 10:23:55,563 | INFO     | job 6841125938 has state=finished
[2025-10-13 06:24:57] 2025-10-13 10:23:55,563 | INFO     | preparing for final server update for job 6841125938 in state='finished'
[2025-10-13 06:24:57] 2025-10-13 10:23:55,564 | INFO     | this job has now completed (state=finished)
[2025-10-13 06:24:57] 2025-10-13 10:23:55,564 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 06:24:57] 2025-10-13 10:23:55,564 | INFO     | log transfer has been attempted: DONE
[2025-10-13 06:24:57] 2025-10-13 10:23:55,564 | INFO     | job 6841125938 has finished - writing final server update
[2025-10-13 06:24:57] 2025-10-13 10:23:55,565 | INFO     | total number of processed events: 400 (read)
[2025-10-13 06:24:57] 2025-10-13 10:23:55,566 | INFO     | executing command: lscpu
[2025-10-13 06:24:57] 2025-10-13 10:23:55,592 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 06:24:57] 2025-10-13 10:23:56,929 | INFO     | time since job start (4391s) is within the limit (172800.0s)
[2025-10-13 06:24:57] 2025-10-13 10:23:57,662 | INFO     | monitor loop #329: job 0:6841125938 is in state 'finished'
[2025-10-13 06:24:57] 2025-10-13 10:23:57,662 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 06:24:57] 2025-10-13 10:23:58,051 | INFO     | PID=23064 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 06:24:57] 2025-10-13 10:23:59,052 | INFO     | time since job start (4394s) is within the limit (172800.0s)
[2025-10-13 06:24:57] 2025-10-13 10:24:00,165 | INFO     | monitor loop #330: job 0:6841125938 is in state 'finished'
[2025-10-13 06:24:57] 2025-10-13 10:24:00,172 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 06:24:57] 2025-10-13 10:24:00,342 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-13 06:24:57] 2025-10-13 10:24:00,346 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1706.9166666666667
[2025-10-13 06:24:57] 2025-10-13 10:24:00,349 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6841125938/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 06:24:57] 2025-10-13 10:24:00,349 | INFO     | extracted standard info from prmon json
[2025-10-13 06:24:57] 2025-10-13 10:24:00,349 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 06:24:57] 2025-10-13 10:24:00,350 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 06:24:57] 2025-10-13 10:24:00,350 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 06:24:57] 2025-10-13 10:24:00,350 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 06:24:57] 2025-10-13 10:24:00,351 | INFO     | fitting pss+swap vs Time
[2025-10-13 06:24:57] 2025-10-13 10:24:00,352 | INFO     | sum of square deviations: 85136480.0
[2025-10-13 06:24:57] 2025-10-13 10:24:00,352 | INFO     | sum of deviations: 1289387256.0000005
[2025-10-13 06:24:57] 2025-10-13 10:24:00,352 | INFO     | mean x: 1760348931.0
[2025-10-13 06:24:57] 2025-10-13 10:24:00,352 | INFO     | mean y: 2698763.6461538463
[2025-10-13 06:24:57] 2025-10-13 10:24:00,352 | INFO     | -- intersect: -26657687920.706127
[2025-10-13 06:24:57] 2025-10-13 10:24:00,352 | INFO     | intersect: -26657687920.706127
[2025-10-13 06:24:57] 2025-10-13 10:24:00,353 | INFO     | chi2: 0.051865584931060395
[2025-10-13 06:24:57] 2025-10-13 10:24:00,353 | INFO     | -- intersect: -26657687920.706127
[2025-10-13 06:24:57] 2025-10-13 10:24:00,353 | INFO     | current memory leak: 15.14 B/s (using 65 data points, chi2=0.05)
[2025-10-13 06:24:57] 2025-10-13 10:24:00,353 | INFO     | could have reported an average CPU frequency of 2036 MHz (6 samples)
[2025-10-13 06:24:57] 2025-10-13 10:24:00,353 | INFO     | ..............................
[2025-10-13 06:24:57] 2025-10-13 10:24:00,353 | INFO     | . Timing measurements:
[2025-10-13 06:24:57] 2025-10-13 10:24:00,354 | INFO     | . get job = 0 s
[2025-10-13 06:24:57] 2025-10-13 10:24:00,354 | INFO     | . initial setup = 2 s
[2025-10-13 06:24:57] 2025-10-13 10:24:00,354 | INFO     | . payload setup = 7 s
[2025-10-13 06:24:57] 2025-10-13 10:24:00,354 | INFO     | . stage-in = 0 s
[2025-10-13 06:24:57] 2025-10-13 10:24:00,354 | INFO     | . payload execution = 4359 s
[2025-10-13 06:24:57] 2025-10-13 10:24:00,354 | INFO     | . stage-out = 0 s
[2025-10-13 06:24:57] 2025-10-13 10:24:00,354 | INFO     | . log creation = 0 s
[2025-10-13 06:24:57] 2025-10-13 10:24:00,354 | INFO     | ..............................
[2025-10-13 06:24:57] 2025-10-13 10:24:00,436 | INFO     | 
[2025-10-13 06:24:57] 2025-10-13 10:24:00,437 | INFO     | job summary report
[2025-10-13 06:24:57] 2025-10-13 10:24:00,437 | INFO     | --------------------------------------------------
[2025-10-13 06:24:57] 2025-10-13 10:24:00,437 | INFO     | PanDA job id: 6841125938
[2025-10-13 06:24:57] 2025-10-13 10:24:00,437 | INFO     | task id: 46676269
[2025-10-13 06:24:57] 2025-10-13 10:24:00,437 | INFO     | errors: (none)
[2025-10-13 06:24:57] 2025-10-13 10:24:00,437 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 06:24:57] 2025-10-13 10:24:00,438 | INFO     | pilot state: finished 
[2025-10-13 06:24:57] 2025-10-13 10:24:00,438 | INFO     | transexitcode: 0
[2025-10-13 06:24:57] 2025-10-13 10:24:00,438 | INFO     | exeerrorcode: 0
[2025-10-13 06:24:57] 2025-10-13 10:24:00,438 | INFO     | exeerrordiag: 
[2025-10-13 06:24:57] 2025-10-13 10:24:00,438 | INFO     | exitcode: 0
[2025-10-13 06:24:57] 2025-10-13 10:24:00,438 | INFO     | exitmsg: OK
[2025-10-13 06:24:57] 2025-10-13 10:24:00,438 | INFO     | cpuconsumptiontime: 46126 s
[2025-10-13 06:24:57] 2025-10-13 10:24:00,439 | INFO     | nevents: 400
[2025-10-13 06:24:57] 2025-10-13 10:24:00,439 | INFO     | neventsw: 0
[2025-10-13 06:24:57] 2025-10-13 10:24:00,439 | INFO     | pid: 29471
[2025-10-13 06:24:57] 2025-10-13 10:24:00,439 | INFO     | pgrp: 29471
[2025-10-13 06:24:57] 2025-10-13 10:24:00,439 | INFO     | corecount: 12
[2025-10-13 06:24:57] 2025-10-13 10:24:00,439 | INFO     | event service: False
[2025-10-13 06:24:57] 2025-10-13 10:24:00,439 | INFO     | sizes: {0: 2348851, 5: 2349113, 11: 2349169, 4369: 2375216, 4370: 2375215, 4372: 2384269, 4374: 2384453, 4379: 2384647}
[2025-10-13 06:24:57] 2025-10-13 10:24:00,440 | INFO     | --------------------------------------------------
[2025-10-13 06:24:57] 2025-10-13 10:24:00,440 | INFO     | 
[2025-10-13 06:24:57] 2025-10-13 10:24:00,440 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 06:24:57] 2025-10-13 10:24:00,464 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 06:24:57] 2025-10-13 10:24:00,464 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 06:24:57] 2025-10-13 10:24:00,464 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 06:24:57] 2025-10-13 10:24:00,464 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 06:24:57] 2025-10-13 10:24:00,465 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 06:24:57] 2025-10-13 10:24:00,465 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 06:24:57] 2025-10-13 10:24:00,465 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 06:24:57] 2025-10-13 10:24:00,465 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 06:24:57] 2025-10-13 10:24:00,465 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 06:24:57] 2025-10-13 10:24:00,465 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 06:24:57] 2025-10-13 10:24:00,466 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 06:24:57] 2025-10-13 10:24:00,466 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 06:24:57] 2025-10-13 10:24:00,466 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 06:24:57] 2025-10-13 10:24:00,466 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 06:24:57] 2025-10-13 10:24:00,466 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 06:24:57] 2025-10-13 10:24:00,466 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 06:24:57] 2025-10-13 10:24:00,467 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 06:24:57] 2025-10-13 10:24:00,467 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 06:24:57] 2025-10-13 10:24:00,467 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 06:24:57] 2025-10-13 10:24:00,467 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 06:24:57] 2025-10-13 10:24:00,467 | INFO     | job 6841125938 has completed (purged errors)
[2025-10-13 06:24:57] 2025-10-13 10:24:00,468 | INFO     | overall cleanup function is called
[2025-10-13 06:24:57] 2025-10-13 10:24:01,475 | INFO     | --- collectZombieJob: --- 10, [29471]
[2025-10-13 06:24:57] 2025-10-13 10:24:01,476 | INFO     | zombie collector waiting for pid 29471
[2025-10-13 06:24:57] 2025-10-13 10:24:01,476 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 06:24:57] 2025-10-13 10:24:01,476 | INFO     | collected zombie processes
[2025-10-13 06:24:57] 2025-10-13 10:24:01,476 | INFO     | will attempt to kill all subprocesses of pid=29471
[2025-10-13 06:24:57] 2025-10-13 10:24:01,567 | INFO     | process IDs to be killed: [29471] (in reverse order)
[2025-10-13 06:24:57] 2025-10-13 10:24:01,618 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 06:24:57] 2025-10-13 10:24:01,618 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 06:24:57] 2025-10-13 10:24:01,621 | INFO     | did not find any defunct processes belonging to 29471
[2025-10-13 06:24:57] 2025-10-13 10:24:01,624 | INFO     | did not find any defunct processes belonging to 29471
[2025-10-13 06:24:57] 2025-10-13 10:24:01,624 | INFO     | ready for new job
[2025-10-13 06:24:57] 2025-10-13 10:24:01,625 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 06:24:57] 2025-10-13 10:24:01,626 | INFO     | ***************************************
[2025-10-13 06:24:57] 2025-10-13 10:24:01,626 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 06:24:57] 2025-10-13 10:24:01,626 | INFO     | ***************************************
[2025-10-13 06:24:57] 2025-10-13 10:24:01,627 | INFO     | 
[2025-10-13 06:24:57] 2025-10-13 10:24:01,627 | INFO     | architecture information:
[2025-10-13 06:24:57] 2025-10-13 10:24:01,628 | INFO     | executing command: cat /etc/os-release
[2025-10-13 06:24:57] 2025-10-13 10:24:01,644 | INFO     | cat /etc/os-release:
[2025-10-13 06:24:57] NAME="CentOS Linux"
[2025-10-13 06:24:57] VERSION="7 (Core)"
[2025-10-13 06:24:57] ID="centos"
[2025-10-13 06:24:57] ID_LIKE="rhel fedora"
[2025-10-13 06:24:57] VERSION_ID="7"
[2025-10-13 06:24:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 06:24:57] ANSI_COLOR="0;31"
[2025-10-13 06:24:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 06:24:57] HOME_URL="https://www.centos.org/"
[2025-10-13 06:24:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 06:24:57] 
[2025-10-13 06:24:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 06:24:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 06:24:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 06:24:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 06:24:57] 
[2025-10-13 06:24:57] 2025-10-13 10:24:01,644 | INFO     | ***************************************
[2025-10-13 06:24:57] 2025-10-13 10:24:02,147 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 06:24:57] 2025-10-13 10:24:02,164 | INFO     | sufficient remaining disk space (29363273728 B)
[2025-10-13 06:24:57] 2025-10-13 10:24:02,164 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 06:24:57] 2025-10-13 10:24:02,165 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 06:24:57] 2025-10-13 10:24:02,165 | INFO     | update_server=False
[2025-10-13 06:24:57] 2025-10-13 10:24:02,165 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 06:24:57] 2025-10-13 10:24:02,165 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:24:57] 2025-10-13 10:24:02,166 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 06:24:57] 2025-10-13 10:24:02,166 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:24:57] 2025-10-13 10:24:02,166 | INFO     | aborting loop
[2025-10-13 06:24:57] 2025-10-13 10:24:02,167 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 06:24:57] 2025-10-13 10:24:02,650 | INFO     | all data control threads have been joined
[2025-10-13 06:24:57] 2025-10-13 10:24:03,169 | INFO     | [job] retrieve thread has finished
[2025-10-13 06:24:57] 2025-10-13 10:24:03,171 | INFO     | [job] queue monitor thread has finished
[2025-10-13 06:24:57] 2025-10-13 10:24:03,172 | INFO     | [job] job monitor thread has finished
[2025-10-13 06:24:57] 2025-10-13 10:24:03,221 | INFO     | all payload control threads have been joined
[2025-10-13 06:24:57] 2025-10-13 10:24:03,236 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 06:24:57] 2025-10-13 10:24:03,324 | INFO     | [payload] failed_post thread has finished
[2025-10-13 06:24:57] 2025-10-13 10:24:03,351 | INFO     | [data] copytool_in thread has finished
[2025-10-13 06:24:57] 2025-10-13 10:24:03,358 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 06:24:57] 2025-10-13 10:24:03,656 | INFO     | [data] control thread has finished
[2025-10-13 06:24:57] 2025-10-13 10:24:03,668 | INFO     | all job control threads have been joined
[2025-10-13 06:24:57] 2025-10-13 10:24:03,941 | INFO     | [payload] validate_post thread has finished
[2025-10-13 06:24:57] 2025-10-13 10:24:04,114 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 06:24:57] 2025-10-13 10:24:04,170 | INFO     | [data] copytool_out thread has finished
[2025-10-13 06:24:57] 2025-10-13 10:24:04,196 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 06:24:57] 2025-10-13 10:24:04,213 | INFO     | [job] validate thread has finished
[2025-10-13 06:24:57] 2025-10-13 10:24:04,226 | INFO     | [payload] control thread has finished
[2025-10-13 06:24:57] 2025-10-13 10:24:04,673 | INFO     | [job] control thread has finished
[2025-10-13 06:24:57] 2025-10-13 10:24:06,173 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 06:24:57] 2025-10-13 10:24:32,255 | INFO     | PID=23064 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 06:24:57] 2025-10-13 10:24:32,255 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 06:24:57] 2025-10-13 10:24:32,255 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 06:24:57] 2025-10-13 10:24:32,255 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 06:24:57] 2025-10-13 10:24:51,834 | INFO     | [monitor] cgroup control has ended
[2025-10-13 06:24:57] 2025-10-13 10:24:52,284 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140716440033088)>', '<ExcThread(monitor, started 140715870906112)>']
[2025-10-13 06:24:57] 2025-10-13 10:24:52,348 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 06:24:57] 2025-10-13 10:24:52,349 | INFO     | [monitor] control thread has ended
[2025-10-13 06:24:57] 2025-10-13 10:24:57,292 | INFO     | all workflow threads have been joined
[2025-10-13 06:24:57] 2025-10-13 10:24:57,292 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 06:24:57] 2025-10-13 10:24:57,297 | INFO     | traces error code: 0
[2025-10-13 06:24:57] 2025-10-13 10:24:57,298 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 06:24:57] 2025-10-13 10:24:57,396 [wrapper] ==== pilot stdout END ====
[2025-10-13 06:24:57] 2025-10-13 10:24:57,400 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 06:24:57] 2025-10-13 10:24:57,404 [wrapper] pilotpid: 23064
[2025-10-13 06:24:57] 2025-10-13 10:24:57,407 [wrapper] Pilot exit status: 0
[2025-10-13 06:24:57] 2025-10-13 10:24:57,422 [wrapper] pandaids: 6841125938
[2025-10-13 06:24:57] 2025-10-13 10:24:57,467 [wrapper] cleanup supervisor_pilot 10966 23065
[2025-10-13 06:24:57] 2025-10-13 10:24:57,470 [wrapper] Test setup, not cleaning
[2025-10-13 06:24:57] 2025-10-13 10:24:57,474 [wrapper] apfmon messages muted
[2025-10-13 06:24:57] 2025-10-13 10:24:57,478 [wrapper] ==== wrapper stdout END ====
[2025-10-13 06:24:57] 2025-10-13 10:24:57,482 [wrapper] ==== wrapper stderr END ====
[2025-10-13 06:24:57]  *** Error codes and diagnostics ***
[2025-10-13 06:24:57]     "exeErrorCode": 0,
[2025-10-13 06:24:57]     "exeErrorDiag": "",
[2025-10-13 06:24:57]     "pilotErrorCode": 0,
[2025-10-13 06:24:57]     "pilotErrorDiag": "",
[2025-10-13 06:24:57]  *** Listing of results directory ***
[2025-10-13 06:24:57] total 412980
[2025-10-13 06:24:57] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 22:00 pilot3.tar.gz
[2025-10-13 06:24:57] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 22:09 queuedata.json
[2025-10-13 06:24:57] -rwx------ 1 boincer umatlas     36292 Oct 12 22:10 runpilot2-wrapper.sh
[2025-10-13 06:24:57] -rw-r--r-- 1 boincer umatlas       100 Oct 13 05:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 06:24:57] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 05:10 run_atlas
[2025-10-13 06:24:57] -rw-r--r-- 1 boincer umatlas       105 Oct 13 05:10 job.xml
[2025-10-13 06:24:57] -rw-r--r-- 2 boincer umatlas 219645271 Oct 13 05:10 EVNT.46676267._004358.pool.root.1
[2025-10-13 06:24:57] drwxrwx--x 2 boincer umatlas      4096 Oct 13 05:10 shared
[2025-10-13 06:24:57] -rw-r--r-- 2 boincer umatlas    569679 Oct 13 05:10 input.tar.gz
[2025-10-13 06:24:57] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 05:10 start_atlas.sh
[2025-10-13 06:24:57] -rw-r--r-- 1 boincer umatlas         0 Oct 13 05:10 boinc_lockfile
[2025-10-13 06:24:57] -rw-r--r-- 1 boincer umatlas      2547 Oct 13 05:10 pandaJob.out
[2025-10-13 06:24:57] -rw------- 1 boincer umatlas    972857 Oct 13 05:10 agis_schedconf.cvmfs.json
[2025-10-13 06:24:57] -rw------- 1 boincer umatlas   1560580 Oct 13 05:10 agis_ddmendpoints.agis.ALL.json
[2025-10-13 06:24:57] drwx------ 5 boincer umatlas      4096 Oct 13 05:10 pilot3
[2025-10-13 06:24:57] -rw-r--r-- 1 boincer umatlas      5952 Oct 13 06:20 init_data.xml
[2025-10-13 06:24:57] -rw------- 1 boincer umatlas 197334452 Oct 13 06:23 HITS.46676269._094711.pool.root.1
[2025-10-13 06:24:57] -rw-r--r-- 1 boincer umatlas       530 Oct 13 06:23 boinc_task_state.xml
[2025-10-13 06:24:57] -rw------- 1 boincer umatlas        95 Oct 13 06:23 pilot_heartbeat.json
[2025-10-13 06:24:57] -rw------- 1 boincer umatlas      1050 Oct 13 06:23 memory_monitor_summary.json
[2025-10-13 06:24:57] -rw------- 1 boincer umatlas    368686 Oct 13 06:23 log.46676269._094711.job.log.tgz.1
[2025-10-13 06:24:57] -rw------- 1 boincer umatlas      7851 Oct 13 06:24 heartbeat.json
[2025-10-13 06:24:57] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 06:24 boinc_mmap_file
[2025-10-13 06:24:57] -rw-r--r-- 1 boincer umatlas        27 Oct 13 06:24 wrapper_checkpoint.txt
[2025-10-13 06:24:57] -rw------- 1 boincer umatlas      4746 Oct 13 06:24 pilotlog.txt
[2025-10-13 06:24:57] -rw------- 1 boincer umatlas    639272 Oct 13 06:24 log.46676269._094711.job.log.1
[2025-10-13 06:24:57] -rw------- 1 boincer umatlas       357 Oct 13 06:24 output.list
[2025-10-13 06:24:57] -rw-r--r-- 1 boincer umatlas       620 Oct 13 06:24 runtime_log
[2025-10-13 06:24:57] -rw------- 1 boincer umatlas   1024000 Oct 13 06:24 result.tar.gz
[2025-10-13 06:24:57] -rw-r--r-- 1 boincer umatlas      8705 Oct 13 06:24 runtime_log.err
[2025-10-13 06:24:57] -rw------- 1 boincer umatlas       659 Oct 13 06:24 KwXKDm4BNS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm8SmNDm4ul2Uo.diag
[2025-10-13 06:24:57] -rw-r--r-- 1 boincer umatlas     22002 Oct 13 06:24 stderr.txt
[2025-10-13 06:24:57] HITS file was successfully produced:
[2025-10-13 06:24:57] -rw------- 1 boincer umatlas 197334452 Oct 13 06:23 shared/HITS.pool.root.1
[2025-10-13 06:24:57]  *** Contents of shared directory: ***
[2025-10-13 06:24:57] total 408788
[2025-10-13 06:24:57] -rw-r--r-- 2 boincer umatlas 219645271 Oct 13 05:10 ATLAS.root_0
[2025-10-13 06:24:57] -rw-r--r-- 2 boincer umatlas    569679 Oct 13 05:10 input.tar.gz
[2025-10-13 06:24:57] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 05:10 start_atlas.sh
[2025-10-13 06:24:57] -rw------- 1 boincer umatlas 197334452 Oct 13 06:23 HITS.pool.root.1
[2025-10-13 06:24:57] -rw------- 1 boincer umatlas   1024000 Oct 13 06:24 result.tar.gz
06:24:59 (18498): run_atlas exited; CPU time 46106.924069
06:24:59 (18498): called boinc_finish(0)

</stderr_txt>
]]>

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