Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:20:30 (2954967): wrapper (7.7.26015): starting
05:20:30 (2954967): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 05:20:30] Arguments: --nthreads 12
[2025-10-13 05:20:30] Threads: 12
[2025-10-13 05:20:30] Checking for CVMFS
[2025-10-13 05:20:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 05:20:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 05:20:31] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 05:20:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 05:20:31] 2.13.2.0 3683012 14039 144032 151656 1 187 38490568 40960000 4516 16776704 0 163396083 99.875 55116014 32597 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 05:20:31] CVMFS is ok
[2025-10-13 05:20:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 05:20:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 05:20:31] Further information can be found at the LHC@home message board.
[2025-10-13 05:20:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 05:20:31] Checking for apptainer binary...
[2025-10-13 05:20:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 05:20:31] Running /usr/bin/apptainer --version
[2025-10-13 05:20:31] apptainer version 1.4.3-1.el9
[2025-10-13 05:20:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 05:20:31] c8-7-4.aglt2.org
[2025-10-13 05:20:31] apptainer works
[2025-10-13 05:20:31] Set ATHENA_PROC_NUMBER=12
[2025-10-13 05:20:31] Set ATHENA_CORE_NUMBER=12
[2025-10-13 05:20:31] Starting ATLAS job with PandaID=6841316377
[2025-10-13 05:20:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 05:47:45]  *** The last 200 lines of the pilot log: ***
[2025-10-13 05:47:45]  mtime=0
[2025-10-13 05:47:45]  protocol_id=None
[2025-10-13 05:47:45]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-13 05:47:45]  replicas=None
[2025-10-13 05:47:45]  scope=mc23_13p6TeV
[2025-10-13 05:47:45]  status=None
[2025-10-13 05:47:45]  status_code=0
[2025-10-13 05:47:45]  storage_token=
[2025-10-13 05:47:45]  surl=/tmp/boinchome/slots/4/PanDA_Pilot-6841316377/log.46676269._095017.job.log.tgz.1
[2025-10-13 05:47:45]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9e/98/log.46676269._095017.job.log.tgz.1
[2025-10-13 05:47:45]  workdir=None
[2025-10-13 05:47:45] ]
[2025-10-13 05:47:45] 2025-10-13 09:46:46,971 | INFO     | transferring file log.46676269._095017.job.log.tgz.1 from /tmp/boinchome/slots/4/PanDA_Pilot-6841316377/log.46676269._095017.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-13 05:47:45] 2025-10-13 09:46:46,971 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/4/PanDA_Pilot-6841316377/log.46676269._095017.job.log.tgz.1 /tmp/boinchome/slots/4/log.46676269._095017.job
[2025-10-13 05:47:45] 2025-10-13 09:46:46,982 | INFO     | adding to output.list: log.46676269._095017.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9e/98/log.46676269._095017.job.log.tg
[2025-10-13 05:47:45] 2025-10-13 09:46:46,982 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 05:47:45] 2025-10-13 09:46:46,982 | INFO     | summary of transferred files:
[2025-10-13 05:47:45] 2025-10-13 09:46:46,982 | INFO     |  -- lfn=log.46676269._095017.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 05:47:45] 2025-10-13 09:46:46,982 | INFO     | stage-out finished correctly
[2025-10-13 05:47:45] 2025-10-13 09:46:47,412 | INFO     | time since job start (1569s) is within the limit (172800.0s)
[2025-10-13 05:47:45] 2025-10-13 09:46:47,974 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 05:47:45] 2025-10-13 09:46:48,027 | INFO     | job 6841316377 has state=finished
[2025-10-13 05:47:45] 2025-10-13 09:46:48,027 | INFO     | preparing for final server update for job 6841316377 in state='finished'
[2025-10-13 05:47:45] 2025-10-13 09:46:48,028 | INFO     | this job has now completed (state=finished)
[2025-10-13 05:47:45] 2025-10-13 09:46:48,028 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 05:47:45] 2025-10-13 09:46:48,028 | INFO     | log transfer has been attempted: DONE
[2025-10-13 05:47:45] 2025-10-13 09:46:48,028 | INFO     | job 6841316377 has finished - writing final server update
[2025-10-13 05:47:45] 2025-10-13 09:46:48,028 | INFO     | total number of processed events: 400 (read)
[2025-10-13 05:47:45] 2025-10-13 09:46:48,028 | INFO     | executing command: lscpu
[2025-10-13 05:47:45] 2025-10-13 09:46:48,081 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 05:47:45] 2025-10-13 09:46:49,417 | INFO     | time since job start (1571s) is within the limit (172800.0s)
[2025-10-13 05:47:45] 2025-10-13 09:46:50,891 | WARNING  | process 2965218 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 05:47:45] 2025-10-13 09:46:50,891 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6841316377/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 05:47:45] 2025-10-13 09:46:50,927 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-13 05:47:45] 2025-10-13 09:46:50,945 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3477.8767265624933
[2025-10-13 05:47:45] 2025-10-13 09:46:50,958 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6841316377/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 05:47:45] 2025-10-13 09:46:50,959 | INFO     | extracted standard info from prmon json
[2025-10-13 05:47:45] 2025-10-13 09:46:50,959 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 05:47:45] 2025-10-13 09:46:50,959 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 05:47:45] 2025-10-13 09:46:50,959 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 05:47:45] 2025-10-13 09:46:50,959 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 05:47:45] 2025-10-13 09:46:50,960 | INFO     | fitting pss+swap vs Time
[2025-10-13 05:47:45] 2025-10-13 09:46:50,961 | INFO     | sum of square deviations: 2120970.0
[2025-10-13 05:47:45] 2025-10-13 09:46:50,961 | INFO     | sum of deviations: -56655457.99999999
[2025-10-13 05:47:45] 2025-10-13 09:46:50,961 | INFO     | mean x: 1760348113.0
[2025-10-13 05:47:45] 2025-10-13 09:46:50,961 | INFO     | mean y: 2442301.3684210526
[2025-10-13 05:47:45] 2025-10-13 09:46:50,961 | INFO     | -- intersect: 47024950201.73983
[2025-10-13 05:47:45] 2025-10-13 09:46:50,961 | INFO     | intersect: 47024950201.73983
[2025-10-13 05:47:45] 2025-10-13 09:46:50,961 | INFO     | chi2: 0.0009138224481178747
[2025-10-13 05:47:45] 2025-10-13 09:46:50,961 | INFO     | -- intersect: 47024950201.73983
[2025-10-13 05:47:45] 2025-10-13 09:46:50,961 | INFO     | current memory leak: -26.71 B/s (using 19 data points, chi2=0.00)
[2025-10-13 05:47:45] 2025-10-13 09:46:50,961 | INFO     | could have reported an average CPU frequency of 3469 MHz (4 samples)
[2025-10-13 05:47:45] 2025-10-13 09:46:50,962 | INFO     | ..............................
[2025-10-13 05:47:45] 2025-10-13 09:46:50,962 | INFO     | . Timing measurements:
[2025-10-13 05:47:45] 2025-10-13 09:46:50,962 | INFO     | . get job = 0 s
[2025-10-13 05:47:45] 2025-10-13 09:46:50,962 | INFO     | . initial setup = 2 s
[2025-10-13 05:47:45] 2025-10-13 09:46:50,962 | INFO     | . payload setup = 3 s
[2025-10-13 05:47:45] 2025-10-13 09:46:50,962 | INFO     | . stage-in = 0 s
[2025-10-13 05:47:45] 2025-10-13 09:46:50,962 | INFO     | . payload execution = 1545 s
[2025-10-13 05:47:45] 2025-10-13 09:46:50,962 | INFO     | . stage-out = 0 s
[2025-10-13 05:47:45] 2025-10-13 09:46:50,962 | INFO     | . log creation = 0 s
[2025-10-13 05:47:45] 2025-10-13 09:46:50,962 | INFO     | ..............................
[2025-10-13 05:47:45] 2025-10-13 09:46:50,999 | INFO     | 
[2025-10-13 05:47:45] 2025-10-13 09:46:51,000 | INFO     | job summary report
[2025-10-13 05:47:45] 2025-10-13 09:46:51,000 | INFO     | --------------------------------------------------
[2025-10-13 05:47:45] 2025-10-13 09:46:51,000 | INFO     | PanDA job id: 6841316377
[2025-10-13 05:47:45] 2025-10-13 09:46:51,000 | INFO     | task id: 46676269
[2025-10-13 05:47:45] 2025-10-13 09:46:51,000 | INFO     | errors: (none)
[2025-10-13 05:47:45] 2025-10-13 09:46:51,000 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 05:47:45] 2025-10-13 09:46:51,000 | INFO     | pilot state: finished 
[2025-10-13 05:47:45] 2025-10-13 09:46:51,000 | INFO     | transexitcode: 0
[2025-10-13 05:47:45] 2025-10-13 09:46:51,000 | INFO     | exeerrorcode: 0
[2025-10-13 05:47:45] 2025-10-13 09:46:51,000 | INFO     | exeerrordiag: 
[2025-10-13 05:47:45] 2025-10-13 09:46:51,000 | INFO     | exitcode: 0
[2025-10-13 05:47:45] 2025-10-13 09:46:51,000 | INFO     | exitmsg: OK
[2025-10-13 05:47:45] 2025-10-13 09:46:51,000 | INFO     | cpuconsumptiontime: 15877 s
[2025-10-13 05:47:45] 2025-10-13 09:46:51,000 | INFO     | nevents: 400
[2025-10-13 05:47:45] 2025-10-13 09:46:51,000 | INFO     | neventsw: 0
[2025-10-13 05:47:45] 2025-10-13 09:46:51,000 | INFO     | pid: 2965218
[2025-10-13 05:47:45] 2025-10-13 09:46:51,000 | INFO     | pgrp: 2965218
[2025-10-13 05:47:45] 2025-10-13 09:46:51,000 | INFO     | corecount: 12
[2025-10-13 05:47:45] 2025-10-13 09:46:51,000 | INFO     | event service: False
[2025-10-13 05:47:45] 2025-10-13 09:46:51,000 | INFO     | sizes: {0: 2348807, 3: 2349069, 11: 2349097, 1552: 2373937, 1554: 2382935, 1555: 2382991, 1558: 2383313}
[2025-10-13 05:47:45] 2025-10-13 09:46:51,000 | INFO     | --------------------------------------------------
[2025-10-13 05:47:45] 2025-10-13 09:46:51,000 | INFO     | 
[2025-10-13 05:47:45] 2025-10-13 09:46:51,000 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-10-13 05:47:45] 2025-10-13 09:46:51,015 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 05:47:45] 2025-10-13 09:46:51,016 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 05:47:45] 2025-10-13 09:46:51,016 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 05:47:45] 2025-10-13 09:46:51,016 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 05:47:45] 2025-10-13 09:46:51,016 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 05:47:45] 2025-10-13 09:46:51,016 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 05:47:45] 2025-10-13 09:46:51,016 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 05:47:45] 2025-10-13 09:46:51,016 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 05:47:45] 2025-10-13 09:46:51,016 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 05:47:45] 2025-10-13 09:46:51,016 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 05:47:45] 2025-10-13 09:46:51,016 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 05:47:45] 2025-10-13 09:46:51,016 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 05:47:45] 2025-10-13 09:46:51,016 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 05:47:45] 2025-10-13 09:46:51,016 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 05:47:45] 2025-10-13 09:46:51,016 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 05:47:45] 2025-10-13 09:46:51,016 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 05:47:45] 2025-10-13 09:46:51,016 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 05:47:45] 2025-10-13 09:46:51,016 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 05:47:45] 2025-10-13 09:46:51,016 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 05:47:45] 2025-10-13 09:46:51,016 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 05:47:45] 2025-10-13 09:46:51,016 | INFO     | job 6841316377 has completed (purged errors)
[2025-10-13 05:47:45] 2025-10-13 09:46:51,017 | INFO     | overall cleanup function is called
[2025-10-13 05:47:45] 2025-10-13 09:46:51,253 | INFO     | number of running child processes to parent process 2965218: 1
[2025-10-13 05:47:45] 2025-10-13 09:46:51,253 | INFO     | maximum number of monitored processes: 6
[2025-10-13 05:47:45] 2025-10-13 09:46:51,253 | INFO     | aborting job monitoring since job object (job id=6841316377) has expired
[2025-10-13 05:47:45] 2025-10-13 09:46:52,024 | INFO     | --- collectZombieJob: --- 10, [2965218]
[2025-10-13 05:47:45] 2025-10-13 09:46:52,024 | INFO     | zombie collector waiting for pid 2965218
[2025-10-13 05:47:45] 2025-10-13 09:46:52,024 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 05:47:45] 2025-10-13 09:46:52,024 | INFO     | collected zombie processes
[2025-10-13 05:47:45] 2025-10-13 09:46:52,024 | INFO     | will attempt to kill all subprocesses of pid=2965218
[2025-10-13 05:47:45] 2025-10-13 09:46:52,231 | INFO     | process IDs to be killed: [2965218] (in reverse order)
[2025-10-13 05:47:45] 2025-10-13 09:46:52,317 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 05:47:45] 2025-10-13 09:46:52,317 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 05:47:45] 2025-10-13 09:46:52,334 | INFO     | did not find any defunct processes belonging to 2965218
[2025-10-13 05:47:45] 2025-10-13 09:46:52,350 | INFO     | did not find any defunct processes belonging to 2965218
[2025-10-13 05:47:45] 2025-10-13 09:46:52,350 | INFO     | ready for new job
[2025-10-13 05:47:45] 2025-10-13 09:46:52,350 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 05:47:45] 2025-10-13 09:46:52,351 | INFO     | ***************************************
[2025-10-13 05:47:45] 2025-10-13 09:46:52,351 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 05:47:45] 2025-10-13 09:46:52,351 | INFO     | ***************************************
[2025-10-13 05:47:45] 2025-10-13 09:46:52,351 | INFO     | 
[2025-10-13 05:47:45] 2025-10-13 09:46:52,368 | INFO     | architecture information:
[2025-10-13 05:47:45] 2025-10-13 09:46:52,368 | INFO     | executing command: cat /etc/os-release
[2025-10-13 05:47:45] 2025-10-13 09:46:52,379 | INFO     | cat /etc/os-release:
[2025-10-13 05:47:45] NAME="CentOS Linux"
[2025-10-13 05:47:45] VERSION="7 (Core)"
[2025-10-13 05:47:45] ID="centos"
[2025-10-13 05:47:45] ID_LIKE="rhel fedora"
[2025-10-13 05:47:45] VERSION_ID="7"
[2025-10-13 05:47:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 05:47:45] ANSI_COLOR="0;31"
[2025-10-13 05:47:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 05:47:45] HOME_URL="https://www.centos.org/"
[2025-10-13 05:47:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 05:47:45] 
[2025-10-13 05:47:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 05:47:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 05:47:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 05:47:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 05:47:45] 
[2025-10-13 05:47:45] 2025-10-13 09:46:52,379 | INFO     | ***************************************
[2025-10-13 05:47:45] 2025-10-13 09:46:52,881 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-10-13 05:47:45] 2025-10-13 09:46:52,895 | INFO     | sufficient remaining disk space (168285962240 B)
[2025-10-13 05:47:45] 2025-10-13 09:46:52,895 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 05:47:45] 2025-10-13 09:46:52,895 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 05:47:45] 2025-10-13 09:46:52,895 | INFO     | update_server=False
[2025-10-13 05:47:45] 2025-10-13 09:46:52,895 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 05:47:45] 2025-10-13 09:46:52,896 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:47:45] 2025-10-13 09:46:52,896 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:47:45] 2025-10-13 09:46:52,896 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 05:47:45] 2025-10-13 09:46:52,896 | INFO     | aborting loop
[2025-10-13 05:47:45] 2025-10-13 09:46:53,356 | INFO     | all data control threads have been joined
[2025-10-13 05:47:45] 2025-10-13 09:46:53,492 | INFO     | all payload control threads have been joined
[2025-10-13 05:47:45] 2025-10-13 09:46:53,901 | INFO     | [job] retrieve thread has finished
[2025-10-13 05:47:45] 2025-10-13 09:46:53,902 | INFO     | [job] queue monitor thread has finished
[2025-10-13 05:47:45] 2025-10-13 09:46:53,902 | INFO     | [job] job monitor thread has finished
[2025-10-13 05:47:45] 2025-10-13 09:46:53,942 | INFO     | all job control threads have been joined
[2025-10-13 05:47:45] 2025-10-13 09:46:54,032 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 05:47:45] 2025-10-13 09:46:54,347 | INFO     | [payload] validate_post thread has finished
[2025-10-13 05:47:45] 2025-10-13 09:46:54,361 | INFO     | [data] control thread has finished
[2025-10-13 05:47:45] 2025-10-13 09:46:54,495 | INFO     | [payload] control thread has finished
[2025-10-13 05:47:45] 2025-10-13 09:46:54,620 | INFO     | [data] copytool_in thread has finished
[2025-10-13 05:47:45] 2025-10-13 09:46:54,706 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 05:47:45] 2025-10-13 09:46:54,833 | INFO     | [job] validate thread has finished
[2025-10-13 05:47:45] 2025-10-13 09:46:54,886 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 05:47:45] 2025-10-13 09:46:54,902 | INFO     | [data] copytool_out thread has finished
[2025-10-13 05:47:45] 2025-10-13 09:46:54,944 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 05:47:45] 2025-10-13 09:46:54,948 | INFO     | [job] control thread has finished
[2025-10-13 05:47:45] 2025-10-13 09:46:54,997 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 05:47:45] 2025-10-13 09:46:55,301 | INFO     | [payload] failed_post thread has finished
[2025-10-13 05:47:45] 2025-10-13 09:46:58,038 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 05:47:45] 2025-10-13 09:47:22,763 | INFO     | PID=2958678 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 05:47:45] 2025-10-13 09:47:22,763 | INFO     | .. there are 7 such processes running
[2025-10-13 05:47:45] 2025-10-13 09:47:22,763 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 05:47:45] 2025-10-13 09:47:22,763 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 05:47:45] 2025-10-13 09:47:22,764 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 05:47:45] 2025-10-13 09:47:40,284 | INFO     | [monitor] cgroup control has ended
[2025-10-13 05:47:45] 2025-10-13 09:47:40,365 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140550101665600)>', '<ExcThread(monitor, started 140549608679168)>']
[2025-10-13 05:47:45] 2025-10-13 09:47:40,853 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 05:47:45] 2025-10-13 09:47:40,854 | INFO     | [monitor] control thread has ended
[2025-10-13 05:47:45] 2025-10-13 09:47:45,389 | INFO     | all workflow threads have been joined
[2025-10-13 05:47:45] 2025-10-13 09:47:45,389 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 05:47:45] 2025-10-13 09:47:45,390 | INFO     | traces error code: 0
[2025-10-13 05:47:45] 2025-10-13 09:47:45,390 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 05:47:45] 2025-10-13 09:47:45,456 [wrapper] ==== pilot stdout END ====
[2025-10-13 05:47:45] 2025-10-13 09:47:45,458 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 05:47:45] 2025-10-13 09:47:45,460 [wrapper] pilotpid: 2958678
[2025-10-13 05:47:45] 2025-10-13 09:47:45,462 [wrapper] Pilot exit status: 0
[2025-10-13 05:47:45] 2025-10-13 09:47:45,469 [wrapper] pandaids: 6841316377
[2025-10-13 05:47:45] 2025-10-13 09:47:45,554 [wrapper] cleanup supervisor_pilot 3040193 2958679
[2025-10-13 05:47:45] 2025-10-13 09:47:45,556 [wrapper] Test setup, not cleaning
[2025-10-13 05:47:45] 2025-10-13 09:47:45,558 [wrapper] apfmon messages muted
[2025-10-13 05:47:45] 2025-10-13 09:47:45,560 [wrapper] ==== wrapper stdout END ====
[2025-10-13 05:47:45] 2025-10-13 09:47:45,562 [wrapper] ==== wrapper stderr END ====
[2025-10-13 05:47:45]  *** Error codes and diagnostics ***
[2025-10-13 05:47:45]     "exeErrorCode": 0,
[2025-10-13 05:47:45]     "exeErrorDiag": "",
[2025-10-13 05:47:45]     "pilotErrorCode": 0,
[2025-10-13 05:47:45]     "pilotErrorDiag": "",
[2025-10-13 05:47:45]  *** Listing of results directory ***
[2025-10-13 05:47:45] total 408444
[2025-10-13 05:47:45] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 22:00 pilot3.tar.gz
[2025-10-13 05:47:45] -rwx------. 1 boincer umatlas     36292 Oct 12 22:30 runpilot2-wrapper.sh
[2025-10-13 05:47:45] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 22:30 queuedata.json
[2025-10-13 05:47:45] -rw-r--r--. 1 boincer umatlas       100 Oct 13 05:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 05:47:45] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 05:20 run_atlas
[2025-10-13 05:47:45] -rw-r--r--. 1 boincer umatlas       105 Oct 13 05:20 job.xml
[2025-10-13 05:47:45] -rw-r--r--. 2 boincer umatlas 220814848 Oct 13 05:20 EVNT.46676267._001847.pool.root.1
[2025-10-13 05:47:45] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 05:20 start_atlas.sh
[2025-10-13 05:47:45] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 05:20 shared
[2025-10-13 05:47:45] -rw-r--r--. 2 boincer umatlas    569681 Oct 13 05:20 input.tar.gz
[2025-10-13 05:47:45] -rw-r--r--. 1 boincer umatlas         0 Oct 13 05:20 boinc_lockfile
[2025-10-13 05:47:45] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 05:20 pandaJob.out
[2025-10-13 05:47:45] -rw-------. 1 boincer umatlas    972849 Oct 13 05:20 agis_schedconf.cvmfs.json
[2025-10-13 05:47:45] -rw-------. 1 boincer umatlas   1560580 Oct 13 05:20 agis_ddmendpoints.agis.ALL.json
[2025-10-13 05:47:45] drwx------. 5 boincer umatlas      4096 Oct 13 05:20 pilot3
[2025-10-13 05:47:45] -rw-r--r--. 1 boincer umatlas      7163 Oct 13 05:36 init_data.xml
[2025-10-13 05:47:45] -rw-------. 1 boincer umatlas 192305600 Oct 13 05:46 HITS.46676269._095017.pool.root.1
[2025-10-13 05:47:45] -rw-r--r--. 1 boincer umatlas       529 Oct 13 05:46 boinc_task_state.xml
[2025-10-13 05:47:45] -rw-------. 1 boincer umatlas      1029 Oct 13 05:46 memory_monitor_summary.json
[2025-10-13 05:47:45] -rw-------. 1 boincer umatlas    347026 Oct 13 05:46 log.46676269._095017.job.log.tgz.1
[2025-10-13 05:47:45] -rw-------. 1 boincer umatlas      7767 Oct 13 05:46 heartbeat.json
[2025-10-13 05:47:45] -rw-------. 1 boincer umatlas        95 Oct 13 05:47 pilot_heartbeat.json
[2025-10-13 05:47:45] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 05:47 boinc_mmap_file
[2025-10-13 05:47:45] -rw-------. 1 boincer umatlas      4824 Oct 13 05:47 pilotlog.txt
[2025-10-13 05:47:45] -rw-r--r--. 1 boincer umatlas        27 Oct 13 05:47 wrapper_checkpoint.txt
[2025-10-13 05:47:45] -rw-------. 1 boincer umatlas    265874 Oct 13 05:47 log.46676269._095017.job.log.1
[2025-10-13 05:47:45] -rw-------. 1 boincer umatlas       357 Oct 13 05:47 output.list
[2025-10-13 05:47:45] -rw-r--r--. 1 boincer umatlas       620 Oct 13 05:47 runtime_log
[2025-10-13 05:47:45] -rw-------. 1 boincer umatlas    634880 Oct 13 05:47 result.tar.gz
[2025-10-13 05:47:45] -rw-------. 1 boincer umatlas       645 Oct 13 05:47 VSPNDmnVNS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmvVmNDmQBQvbn.diag
[2025-10-13 05:47:45] -rw-r--r--. 1 boincer umatlas      8695 Oct 13 05:47 runtime_log.err
[2025-10-13 05:47:45] -rw-r--r--. 1 boincer umatlas     21723 Oct 13 05:47 stderr.txt
[2025-10-13 05:47:45] HITS file was successfully produced:
[2025-10-13 05:47:45] -rw-------. 1 boincer umatlas 192305600 Oct 13 05:46 shared/HITS.pool.root.1
[2025-10-13 05:47:45]  *** Contents of shared directory: ***
[2025-10-13 05:47:45] total 404644
[2025-10-13 05:47:45] -rw-r--r--. 2 boincer umatlas 220814848 Oct 13 05:20 ATLAS.root_0
[2025-10-13 05:47:45] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 05:20 start_atlas.sh
[2025-10-13 05:47:45] -rw-r--r--. 2 boincer umatlas    569681 Oct 13 05:20 input.tar.gz
[2025-10-13 05:47:45] -rw-------. 1 boincer umatlas 192305600 Oct 13 05:46 HITS.pool.root.1
[2025-10-13 05:47:45] -rw-------. 1 boincer umatlas    634880 Oct 13 05:47 result.tar.gz
05:47:47 (2954967): run_atlas exited; CPU time 15904.293266
05:47:47 (2954967): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN