Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:06:54 (3880804): wrapper (7.7.26015): starting
05:06:54 (3880804): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 05:06:54] Arguments: --nthreads 8
[2025-10-13 05:06:54] Threads: 8
[2025-10-13 05:06:54] Checking for CVMFS
[2025-10-13 05:06:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 05:06:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 05:06:54] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 05:06:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 05:06:54] 2.13.2.0 2191370 130499 512164 151654 1 492 30204450 32935937 41370 16776704 0 440032212 99.667 386825389 17149 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 05:06:54] CVMFS is ok
[2025-10-13 05:06:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 05:06:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 05:06:54] Further information can be found at the LHC@home message board.
[2025-10-13 05:06:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 05:06:54] Checking for apptainer binary...
[2025-10-13 05:06:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 05:06:54] Running /usr/bin/apptainer --version
[2025-10-13 05:06:54] apptainer version 1.4.3-1.el9
[2025-10-13 05:06:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 05:06:55] c7-2-14.aglt2.org
[2025-10-13 05:06:55] apptainer works
[2025-10-13 05:06:55] Set ATHENA_PROC_NUMBER=8
[2025-10-13 05:06:55] Set ATHENA_CORE_NUMBER=8
[2025-10-13 05:06:55] Starting ATLAS job with PandaID=6841124255
[2025-10-13 05:06:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 09:27:50]  *** The last 200 lines of the pilot log: ***
[2025-10-13 09:27:50] 2025-10-13 13:27:07,433 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 09:27:50] 2025-10-13 13:27:07,436 | INFO     | fitting pss+swap vs Time
[2025-10-13 09:27:50] 2025-10-13 13:27:07,437 | INFO     | sum of square deviations: 5141483948.807815
[2025-10-13 09:27:50] 2025-10-13 13:27:07,438 | INFO     | sum of deviations: 54660567651.4471
[2025-10-13 09:27:50] 2025-10-13 13:27:07,438 | INFO     | mean x: 1760354238.027451
[2025-10-13 09:27:50] 2025-10-13 13:27:07,438 | INFO     | mean y: 2197448.3647058825
[2025-10-13 09:27:50] 2025-10-13 13:27:07,439 | INFO     | -- intersect: -18712625524.198036
[2025-10-13 09:27:50] 2025-10-13 13:27:07,439 | INFO     | intersect: -18712625524.198036
[2025-10-13 09:27:50] 2025-10-13 13:27:07,439 | INFO     | chi2: 2.54182227314752
[2025-10-13 09:27:50] 2025-10-13 13:27:07,439 | INFO     | sum of square deviations: 4844931686.304023
[2025-10-13 09:27:50] 2025-10-13 13:27:07,441 | INFO     | sum of deviations: 69328345843.91199
[2025-10-13 09:27:50] 2025-10-13 13:27:07,441 | INFO     | mean x: 1760354085.528
[2025-10-13 09:27:50] 2025-10-13 13:27:07,441 | INFO     | mean y: 2204858.084
[2025-10-13 09:27:50] 2025-10-13 13:27:07,441 | INFO     | -- intersect: -25187507763.504936
[2025-10-13 09:27:50] 2025-10-13 13:27:07,441 | INFO     | intersect: -25187507763.504936
[2025-10-13 09:27:50] 2025-10-13 13:27:07,441 | INFO     | chi2: 1.6736101948404236
[2025-10-13 09:27:50] 2025-10-13 13:27:07,441 | INFO     | current chi2=1.6736101948404236 (change=34.15707256479406 %)
[2025-10-13 09:27:50] 2025-10-13 13:27:07,442 | INFO     | sum of square deviations: 4560007548.800004
[2025-10-13 09:27:50] 2025-10-13 13:27:07,443 | INFO     | sum of deviations: 67145041281.542885
[2025-10-13 09:27:50] 2025-10-13 13:27:07,443 | INFO     | mean x: 1760353933.0285714
[2025-10-13 09:27:50] 2025-10-13 13:27:07,443 | INFO     | mean y: 2203686.636734694
[2025-10-13 09:27:50] 2025-10-13 13:27:07,443 | INFO     | -- intersect: -25918594960.820477
[2025-10-13 09:27:50] 2025-10-13 13:27:07,443 | INFO     | intersect: -25918594960.820477
[2025-10-13 09:27:50] 2025-10-13 13:27:07,443 | INFO     | chi2: 1.673093604942436
[2025-10-13 09:27:50] 2025-10-13 13:27:07,444 | INFO     | current chi2=1.673093604942436 (change=0.03086679918538531 %)
[2025-10-13 09:27:50] 2025-10-13 13:27:07,444 | INFO     | right removable region: 244
[2025-10-13 09:27:50] 2025-10-13 13:27:07,444 | INFO     | sum of square deviations: 4844927416.304023
[2025-10-13 09:27:50] 2025-10-13 13:27:07,445 | INFO     | sum of deviations: 14239320074.247997
[2025-10-13 09:27:50] 2025-10-13 13:27:07,446 | INFO     | mean x: 1760354390.528
[2025-10-13 09:27:50] 2025-10-13 13:27:07,446 | INFO     | mean y: 2218096.036
[2025-10-13 09:27:50] 2025-10-13 13:27:07,446 | INFO     | -- intersect: -5171491942.732313
[2025-10-13 09:27:50] 2025-10-13 13:27:07,446 | INFO     | intersect: -5171491942.732313
[2025-10-13 09:27:50] 2025-10-13 13:27:07,446 | INFO     | chi2: 0.9841907636356109
[2025-10-13 09:27:50] 2025-10-13 13:27:07,446 | INFO     | current chi2=0.9841907636356109 (change=61.280110964764866 %)
[2025-10-13 09:27:50] 2025-10-13 13:27:07,446 | INFO     | sum of square deviations: 4559999008.800004
[2025-10-13 09:27:50] 2025-10-13 13:27:07,448 | INFO     | sum of deviations: 10131940667.51429
[2025-10-13 09:27:50] 2025-10-13 13:27:07,448 | INFO     | mean x: 1760354543.0285714
[2025-10-13 09:27:50] 2025-10-13 13:27:07,448 | INFO     | mean y: 2220275.7836734694
[2025-10-13 09:27:50] 2025-10-13 13:27:07,448 | INFO     | -- intersect: -3909141930.5095105
[2025-10-13 09:27:50] 2025-10-13 13:27:07,448 | INFO     | intersect: -3909141930.5095105
[2025-10-13 09:27:50] 2025-10-13 13:27:07,448 | INFO     | chi2: 0.9599996710596477
[2025-10-13 09:27:50] 2025-10-13 13:27:07,448 | INFO     | current chi2=0.9599996710596477 (change=2.4579678523501935 %)
[2025-10-13 09:27:50] 2025-10-13 13:27:07,448 | INFO     | left removable region: 20
[2025-10-13 09:27:50] 2025-10-13 13:27:07,449 | INFO     | sum of square deviations: 3485039745.78125
[2025-10-13 09:27:50] 2025-10-13 13:27:07,450 | INFO     | sum of deviations: 16887278318.843752
[2025-10-13 09:27:50] 2025-10-13 13:27:07,450 | INFO     | mean x: 1760354512.53125
[2025-10-13 09:27:50] 2025-10-13 13:27:07,450 | INFO     | mean y: 2231990.5223214286
[2025-10-13 09:27:50] 2025-10-13 13:27:07,450 | INFO     | -- intersect: -8527827567.315988
[2025-10-13 09:27:50] 2025-10-13 13:27:07,450 | INFO     | intersect: -8527827567.315988
[2025-10-13 09:27:50] 2025-10-13 13:27:07,450 | INFO     | chi2: 0.06359731152816889
[2025-10-13 09:27:50] 2025-10-13 13:27:07,451 | INFO     | -- intersect: -8527827567.315988
[2025-10-13 09:27:50] 2025-10-13 13:27:07,451 | INFO     | current memory leak: 4.85 B/s (using 224 data points, chi2=0.06)
[2025-10-13 09:27:50] 2025-10-13 13:27:07,451 | INFO     | could have reported an average CPU frequency of 3064 MHz (12 samples)
[2025-10-13 09:27:50] 2025-10-13 13:27:07,451 | INFO     | ..............................
[2025-10-13 09:27:50] 2025-10-13 13:27:07,451 | INFO     | . Timing measurements:
[2025-10-13 09:27:50] 2025-10-13 13:27:07,451 | INFO     | . get job = 0 s
[2025-10-13 09:27:50] 2025-10-13 13:27:07,451 | INFO     | . initial setup = 3 s
[2025-10-13 09:27:50] 2025-10-13 13:27:07,452 | INFO     | . payload setup = 13 s
[2025-10-13 09:27:50] 2025-10-13 13:27:07,452 | INFO     | . stage-in = 0 s
[2025-10-13 09:27:50] 2025-10-13 13:27:07,452 | INFO     | . payload execution = 15527 s
[2025-10-13 09:27:50] 2025-10-13 13:27:07,452 | INFO     | . stage-out = 2 s
[2025-10-13 09:27:50] 2025-10-13 13:27:07,452 | INFO     | . log creation = 0 s
[2025-10-13 09:27:50] 2025-10-13 13:27:07,452 | INFO     | ..............................
[2025-10-13 09:27:50] 2025-10-13 13:27:07,964 | INFO     | 
[2025-10-13 09:27:50] 2025-10-13 13:27:07,964 | INFO     | job summary report
[2025-10-13 09:27:50] 2025-10-13 13:27:07,964 | INFO     | --------------------------------------------------
[2025-10-13 09:27:50] 2025-10-13 13:27:07,964 | INFO     | PanDA job id: 6841124255
[2025-10-13 09:27:50] 2025-10-13 13:27:07,964 | INFO     | task id: 46676269
[2025-10-13 09:27:50] 2025-10-13 13:27:07,964 | INFO     | errors: (none)
[2025-10-13 09:27:50] 2025-10-13 13:27:07,964 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 09:27:50] 2025-10-13 13:27:07,964 | INFO     | pilot state: finished 
[2025-10-13 09:27:50] 2025-10-13 13:27:07,964 | INFO     | transexitcode: 0
[2025-10-13 09:27:50] 2025-10-13 13:27:07,964 | INFO     | exeerrorcode: 0
[2025-10-13 09:27:50] 2025-10-13 13:27:07,965 | INFO     | exeerrordiag: 
[2025-10-13 09:27:50] 2025-10-13 13:27:07,965 | INFO     | exitcode: 0
[2025-10-13 09:27:50] 2025-10-13 13:27:07,965 | INFO     | exitmsg: OK
[2025-10-13 09:27:50] 2025-10-13 13:27:07,965 | INFO     | cpuconsumptiontime: 37482 s
[2025-10-13 09:27:50] 2025-10-13 13:27:07,965 | INFO     | nevents: 400
[2025-10-13 09:27:50] 2025-10-13 13:27:07,965 | INFO     | neventsw: 0
[2025-10-13 09:27:50] 2025-10-13 13:27:07,965 | INFO     | pid: 3910118
[2025-10-13 09:27:50] 2025-10-13 13:27:07,965 | INFO     | pgrp: 3910118
[2025-10-13 09:27:50] 2025-10-13 13:27:07,965 | INFO     | corecount: 8
[2025-10-13 09:27:50] 2025-10-13 13:27:07,965 | INFO     | event service: False
[2025-10-13 09:27:50] 2025-10-13 13:27:07,965 | INFO     | sizes: {0: 2348805, 11: 2349067, 22: 2349095, 15544: 2380251, 15548: 2389249, 15549: 2389305, 15559: 2389627}
[2025-10-13 09:27:50] 2025-10-13 13:27:07,965 | INFO     | --------------------------------------------------
[2025-10-13 09:27:50] 2025-10-13 13:27:07,965 | INFO     | 
[2025-10-13 09:27:50] 2025-10-13 13:27:07,965 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-13 09:27:50] 2025-10-13 13:27:08,007 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 09:27:50] 2025-10-13 13:27:08,008 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 09:27:50] 2025-10-13 13:27:08,008 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 09:27:50] 2025-10-13 13:27:08,008 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 09:27:50] 2025-10-13 13:27:08,008 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 09:27:50] 2025-10-13 13:27:08,008 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 09:27:50] 2025-10-13 13:27:08,008 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 09:27:50] 2025-10-13 13:27:08,008 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 09:27:50] 2025-10-13 13:27:08,008 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 09:27:50] 2025-10-13 13:27:08,008 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 09:27:50] 2025-10-13 13:27:08,008 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 09:27:50] 2025-10-13 13:27:08,008 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 09:27:50] 2025-10-13 13:27:08,009 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 09:27:50] 2025-10-13 13:27:08,009 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 09:27:50] 2025-10-13 13:27:08,009 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 09:27:50] 2025-10-13 13:27:08,009 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 09:27:50] 2025-10-13 13:27:08,009 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 09:27:50] 2025-10-13 13:27:08,009 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 09:27:50] 2025-10-13 13:27:08,009 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 09:27:50] 2025-10-13 13:27:08,009 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 09:27:50] 2025-10-13 13:27:08,009 | INFO     | job 6841124255 has completed (purged errors)
[2025-10-13 09:27:50] 2025-10-13 13:27:08,009 | INFO     | overall cleanup function is called
[2025-10-13 09:27:50] 2025-10-13 13:27:09,017 | INFO     | --- collectZombieJob: --- 10, [3910118]
[2025-10-13 09:27:50] 2025-10-13 13:27:09,018 | INFO     | zombie collector waiting for pid 3910118
[2025-10-13 09:27:50] 2025-10-13 13:27:09,018 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 09:27:50] 2025-10-13 13:27:09,018 | INFO     | collected zombie processes
[2025-10-13 09:27:50] 2025-10-13 13:27:09,018 | INFO     | will attempt to kill all subprocesses of pid=3910118
[2025-10-13 09:27:50] 2025-10-13 13:27:09,482 | INFO     | process IDs to be killed: [3910118] (in reverse order)
[2025-10-13 09:27:50] 2025-10-13 13:27:09,647 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 09:27:50] 2025-10-13 13:27:09,647 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 09:27:50] 2025-10-13 13:27:09,685 | INFO     | did not find any defunct processes belonging to 3910118
[2025-10-13 09:27:50] 2025-10-13 13:27:09,705 | INFO     | did not find any defunct processes belonging to 3910118
[2025-10-13 09:27:50] 2025-10-13 13:27:09,705 | INFO     | ready for new job
[2025-10-13 09:27:50] 2025-10-13 13:27:09,705 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 09:27:50] 2025-10-13 13:27:09,707 | INFO     | ***************************************
[2025-10-13 09:27:50] 2025-10-13 13:27:09,707 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 09:27:50] 2025-10-13 13:27:09,707 | INFO     | ***************************************
[2025-10-13 09:27:50] 2025-10-13 13:27:09,707 | INFO     | 
[2025-10-13 09:27:50] 2025-10-13 13:27:09,726 | INFO     | architecture information:
[2025-10-13 09:27:50] 2025-10-13 13:27:09,726 | INFO     | executing command: cat /etc/os-release
[2025-10-13 09:27:50] 2025-10-13 13:27:09,744 | INFO     | cat /etc/os-release:
[2025-10-13 09:27:50] NAME="CentOS Linux"
[2025-10-13 09:27:50] VERSION="7 (Core)"
[2025-10-13 09:27:50] ID="centos"
[2025-10-13 09:27:50] ID_LIKE="rhel fedora"
[2025-10-13 09:27:50] VERSION_ID="7"
[2025-10-13 09:27:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 09:27:50] ANSI_COLOR="0;31"
[2025-10-13 09:27:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 09:27:50] HOME_URL="https://www.centos.org/"
[2025-10-13 09:27:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 09:27:50] 
[2025-10-13 09:27:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 09:27:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 09:27:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 09:27:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 09:27:50] 
[2025-10-13 09:27:50] 2025-10-13 13:27:09,744 | INFO     | ***************************************
[2025-10-13 09:27:50] 2025-10-13 13:27:10,248 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-13 09:27:50] 2025-10-13 13:27:10,336 | INFO     | sufficient remaining disk space (75974574080 B)
[2025-10-13 09:27:50] 2025-10-13 13:27:10,339 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 09:27:50] 2025-10-13 13:27:10,339 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 09:27:50] 2025-10-13 13:27:10,339 | INFO     | update_server=False
[2025-10-13 09:27:50] 2025-10-13 13:27:10,339 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 09:27:50] 2025-10-13 13:27:10,631 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 09:27:50] 2025-10-13 13:27:10,632 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 09:27:50] 2025-10-13 13:27:10,632 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 09:27:50] 2025-10-13 13:27:10,632 | INFO     | will abort loop
[2025-10-13 09:27:50] 2025-10-13 13:27:10,700 | INFO     | all data control threads have been joined
[2025-10-13 09:27:50] 2025-10-13 13:27:11,346 | INFO     | [job] retrieve thread has finished
[2025-10-13 09:27:50] 2025-10-13 13:27:11,602 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 09:27:50] 2025-10-13 13:27:11,639 | INFO     | [job] job monitor thread has finished
[2025-10-13 09:27:50] 2025-10-13 13:27:11,706 | INFO     | [data] control thread has finished
[2025-10-13 09:27:50] 2025-10-13 13:27:11,715 | INFO     | all payload control threads have been joined
[2025-10-13 09:27:50] 2025-10-13 13:27:11,754 | INFO     | all job control threads have been joined
[2025-10-13 09:27:50] 2025-10-13 13:27:11,797 | INFO     | [data] copytool_in thread has finished
[2025-10-13 09:27:50] 2025-10-13 13:27:11,923 | INFO     | [payload] failed_post thread has finished
[2025-10-13 09:27:50] 2025-10-13 13:27:12,276 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 09:27:50] 2025-10-13 13:27:12,319 | INFO     | [job] validate thread has finished
[2025-10-13 09:27:50] 2025-10-13 13:27:12,320 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 09:27:50] 2025-10-13 13:27:12,406 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 09:27:50] 2025-10-13 13:27:12,531 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 09:27:50] 2025-10-13 13:27:12,561 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 09:27:50] 2025-10-13 13:27:12,575 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 09:27:50] 2025-10-13 13:27:12,721 | INFO     | [payload] control thread has finished
[2025-10-13 09:27:50] 2025-10-13 13:27:12,746 | INFO     | [payload] validate_post thread has finished
[2025-10-13 09:27:50] 2025-10-13 13:27:12,767 | INFO     | [job] control thread has finished
[2025-10-13 09:27:50] 2025-10-13 13:27:13,583 | INFO     | [job] queue monitor thread has finished
[2025-10-13 09:27:50] 2025-10-13 13:27:13,609 | INFO     | [data] copytool_out thread has finished
[2025-10-13 09:27:50] 2025-10-13 13:27:16,342 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 09:27:50] 2025-10-13 13:27:40,630 | INFO     | PID=3890204 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 09:27:50] 2025-10-13 13:27:40,631 | INFO     | .. there are 32 such processes running
[2025-10-13 09:27:50] 2025-10-13 13:27:40,631 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 09:27:50] 2025-10-13 13:27:40,631 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 09:27:50] 2025-10-13 13:27:40,631 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 09:27:50] 2025-10-13 13:27:45,075 | INFO     | [monitor] cgroup control has ended
[2025-10-13 09:27:50] 2025-10-13 13:27:45,176 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140025615353664)>', '<ExcThread(monitor, started 140024985151232)>']
[2025-10-13 09:27:50] 2025-10-13 13:27:45,657 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 09:27:50] 2025-10-13 13:27:45,658 | INFO     | [monitor] control thread has ended
[2025-10-13 09:27:50] 2025-10-13 13:27:50,201 | INFO     | all workflow threads have been joined
[2025-10-13 09:27:50] 2025-10-13 13:27:50,202 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 09:27:50] 2025-10-13 13:27:50,202 | INFO     | traces error code: 0
[2025-10-13 09:27:50] 2025-10-13 13:27:50,202 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 09:27:50] 2025-10-13 13:27:50,361 [wrapper] ==== pilot stdout END ====
[2025-10-13 09:27:50] 2025-10-13 13:27:50,377 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 09:27:50] 2025-10-13 13:27:50,380 [wrapper] pilotpid: 3890204
[2025-10-13 09:27:50] 2025-10-13 13:27:50,387 [wrapper] Pilot exit status: 0
[2025-10-13 09:27:50] 2025-10-13 13:27:50,402 [wrapper] pandaids: 6841124255
[2025-10-13 09:27:50] 2025-10-13 13:27:50,553 [wrapper] cleanup supervisor_pilot  644299 3890205
[2025-10-13 09:27:50] 2025-10-13 13:27:50,563 [wrapper] Test setup, not cleaning
[2025-10-13 09:27:50] 2025-10-13 13:27:50,567 [wrapper] apfmon messages muted
[2025-10-13 09:27:50] 2025-10-13 13:27:50,570 [wrapper] ==== wrapper stdout END ====
[2025-10-13 09:27:50] 2025-10-13 13:27:50,574 [wrapper] ==== wrapper stderr END ====
[2025-10-13 09:27:50]  *** Error codes and diagnostics ***
[2025-10-13 09:27:50]     "exeErrorCode": 0,
[2025-10-13 09:27:50]     "exeErrorDiag": "",
[2025-10-13 09:27:50]     "pilotErrorCode": 0,
[2025-10-13 09:27:50]     "pilotErrorDiag": "",
[2025-10-13 09:27:50]  *** Listing of results directory ***
[2025-10-13 09:27:50] total 417856
[2025-10-13 09:27:50] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 21:18 pilot3.tar.gz
[2025-10-13 09:27:50] -rwx------. 1 boincer umatlas     36292 Oct 12 21:29 runpilot2-wrapper.sh
[2025-10-13 09:27:50] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 21:29 queuedata.json
[2025-10-13 09:27:50] -rw-r--r--. 1 boincer umatlas       100 Oct 13 05:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 09:27:50] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 05:06 run_atlas
[2025-10-13 09:27:50] -rw-r--r--. 1 boincer umatlas       105 Oct 13 05:06 job.xml
[2025-10-13 09:27:50] -rw-r--r--. 2 boincer umatlas 222682615 Oct 13 05:06 EVNT.46676267._002264.pool.root.1
[2025-10-13 09:27:50] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 05:06 start_atlas.sh
[2025-10-13 09:27:50] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 05:06 shared
[2025-10-13 09:27:50] -rw-r--r--. 2 boincer umatlas    569681 Oct 13 05:06 input.tar.gz
[2025-10-13 09:27:50] -rw-r--r--. 1 boincer umatlas         0 Oct 13 05:06 boinc_lockfile
[2025-10-13 09:27:50] -rw-r--r--. 1 boincer umatlas      2549 Oct 13 05:06 pandaJob.out
[2025-10-13 09:27:50] -rw-------. 1 boincer umatlas    972857 Oct 13 05:07 agis_schedconf.cvmfs.json
[2025-10-13 09:27:50] drwx------. 5 boincer umatlas      4096 Oct 13 05:07 pilot3
[2025-10-13 09:27:50] -rw-r--r--. 1 boincer umatlas       530 Oct 13 09:26 boinc_task_state.xml
[2025-10-13 09:27:50] -rw-------. 1 boincer umatlas 196748075 Oct 13 09:26 HITS.46676269._094163.pool.root.1
[2025-10-13 09:27:50] -rw-------. 1 boincer umatlas        95 Oct 13 09:26 pilot_heartbeat.json
[2025-10-13 09:27:50] -rw-------. 1 boincer umatlas      1034 Oct 13 09:26 memory_monitor_summary.json
[2025-10-13 09:27:50] -rw-------. 1 boincer umatlas   1560580 Oct 13 09:26 agis_ddmendpoints.agis.ALL.json
[2025-10-13 09:27:50] -rw-------. 1 boincer umatlas    449509 Oct 13 09:26 log.46676269._094163.job.log.tgz.1
[2025-10-13 09:27:50] -rw-------. 1 boincer umatlas      7774 Oct 13 09:27 heartbeat.json
[2025-10-13 09:27:50] -rw-r--r--. 1 boincer umatlas      6935 Oct 13 09:27 init_data.xml
[2025-10-13 09:27:50] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 09:27 boinc_mmap_file
[2025-10-13 09:27:50] -rw-r--r--. 1 boincer umatlas        28 Oct 13 09:27 wrapper_checkpoint.txt
[2025-10-13 09:27:50] -rw-------. 1 boincer umatlas      5010 Oct 13 09:27 pilotlog.txt
[2025-10-13 09:27:50] -rw-------. 1 boincer umatlas   1828665 Oct 13 09:27 log.46676269._094163.job.log.1
[2025-10-13 09:27:50] -rw-------. 1 boincer umatlas       357 Oct 13 09:27 output.list
[2025-10-13 09:27:50] -rw-r--r--. 1 boincer umatlas       620 Oct 13 09:27 runtime_log
[2025-10-13 09:27:50] -rw-------. 1 boincer umatlas   2293760 Oct 13 09:27 result.tar.gz
[2025-10-13 09:27:50] -rw-r--r--. 1 boincer umatlas      8699 Oct 13 09:27 runtime_log.err
[2025-10-13 09:27:50] -rw-------. 1 boincer umatlas       657 Oct 13 09:27 pLsKDm0YMS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmINmNDmQ0rnbn.diag
[2025-10-13 09:27:50] -rw-r--r--. 1 boincer umatlas     20988 Oct 13 09:27 stderr.txt
[2025-10-13 09:27:50] HITS file was successfully produced:
[2025-10-13 09:27:50] -rw-------. 1 boincer umatlas 196748075 Oct 13 09:26 shared/HITS.pool.root.1
[2025-10-13 09:27:50]  *** Contents of shared directory: ***
[2025-10-13 09:27:50] total 412428
[2025-10-13 09:27:50] -rw-r--r--. 2 boincer umatlas 222682615 Oct 13 05:06 ATLAS.root_0
[2025-10-13 09:27:50] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 05:06 start_atlas.sh
[2025-10-13 09:27:50] -rw-r--r--. 2 boincer umatlas    569681 Oct 13 05:06 input.tar.gz
[2025-10-13 09:27:50] -rw-------. 1 boincer umatlas 196748075 Oct 13 09:26 HITS.pool.root.1
[2025-10-13 09:27:50] -rw-------. 1 boincer umatlas   2293760 Oct 13 09:27 result.tar.gz
09:27:51 (3880804): run_atlas exited; CPU time 38132.991431
09:27:51 (3880804): called boinc_finish(0)

</stderr_txt>
]]>

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