Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:37:49 (3305717): wrapper (7.7.26015): starting
13:37:49 (3305717): wrapper: running run_atlas (--nthreads 4)
[2025-10-14 13:37:49] Arguments: --nthreads 4
[2025-10-14 13:37:49] Threads: 4
[2025-10-14 13:37:49] Checking for CVMFS
[2025-10-14 13:37:49] No cvmfs_config command found, will try listing directly
[2025-10-14 13:37:49] CVMFS is ok
[2025-10-14 13:37:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-14 13:37:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-14 13:37:49] Further information can be found at the LHC@home message board.
[2025-10-14 13:37:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-14 13:37:49] Checking for apptainer binary...
[2025-10-14 13:37:49] which: no apptainer in ((null))
[2025-10-14 13:37:49] apptainer is not installed, using version from CVMFS
[2025-10-14 13:37:49] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-14 13:37:49] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot56/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut05.grid.cesnet.cz
[2025-10-14 13:37:49] apptainer works
[2025-10-14 13:37:49] Set ATHENA_PROC_NUMBER=4
[2025-10-14 13:37:49] Set ATHENA_CORE_NUMBER=4
[2025-10-14 13:37:49] Starting ATLAS job with PandaID=6841276472
[2025-10-14 13:37:49] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot56/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-14 17:07:46]  *** The last 200 lines of the pilot log: ***
[2025-10-14 17:07:46] 2025-10-14 14:42:23,524 | INFO     | time since job start (11063s) is within the limit (172800.0s)
[2025-10-14 17:07:46] 2025-10-14 14:42:24,790 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-14 17:07:46] 2025-10-14 14:42:24,799 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2759.956671875
[2025-10-14 17:07:46] 2025-10-14 14:42:24,811 | INFO     | using path: /scratch/boinc/var/slot56/slots/0/PanDA_Pilot-6841276472/memory_monitor_summary.json (trf name=prmon)
[2025-10-14 17:07:46] 2025-10-14 14:42:24,811 | INFO     | extracted standard info from prmon json
[2025-10-14 17:07:46] 2025-10-14 14:42:24,811 | INFO     | extracted standard memory fields from prmon json
[2025-10-14 17:07:46] 2025-10-14 14:42:24,811 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-14 17:07:46] 2025-10-14 14:42:24,812 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-14 17:07:46] 2025-10-14 14:42:24,812 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-14 17:07:46] 2025-10-14 14:42:24,815 | INFO     | fitting pss+swap vs Time
[2025-10-14 17:07:46] 2025-10-14 14:42:24,815 | INFO     | sum of square deviations: 1838657730.0
[2025-10-14 17:07:46] 2025-10-14 14:42:24,816 | INFO     | sum of deviations: 6458105563.000005
[2025-10-14 17:07:46] 2025-10-14 14:42:24,816 | INFO     | mean x: 1760447397.0
[2025-10-14 17:07:46] 2025-10-14 14:42:24,817 | INFO     | mean y: 2343405.817679558
[2025-10-14 17:07:46] 2025-10-14 14:42:24,817 | INFO     | -- intersect: -6181056006.934675
[2025-10-14 17:07:46] 2025-10-14 14:42:24,817 | INFO     | intersect: -6181056006.934675
[2025-10-14 17:07:46] 2025-10-14 14:42:24,817 | INFO     | chi2: 1.4377838532641085
[2025-10-14 17:07:46] 2025-10-14 14:42:24,817 | INFO     | sum of square deviations: 1690450300.0
[2025-10-14 17:07:46] 2025-10-14 14:42:24,818 | INFO     | sum of deviations: 6243131802.999998
[2025-10-14 17:07:46] 2025-10-14 14:42:24,818 | INFO     | mean x: 1760447244.5
[2025-10-14 17:07:46] 2025-10-14 14:42:24,819 | INFO     | mean y: 2343184.7045454546
[2025-10-14 17:07:46] 2025-10-14 14:42:24,819 | INFO     | -- intersect: -6499299708.695908
[2025-10-14 17:07:46] 2025-10-14 14:42:24,819 | INFO     | intersect: -6499299708.695908
[2025-10-14 17:07:46] 2025-10-14 14:42:24,819 | INFO     | chi2: 1.43842227370893
[2025-10-14 17:07:46] 2025-10-14 14:42:24,819 | INFO     | current chi2=1.43842227370893 (change=-0.044403089057661646 %)
[2025-10-14 17:07:46] 2025-10-14 14:42:24,819 | INFO     | right removable region: 175
[2025-10-14 17:07:46] 2025-10-14 14:42:24,819 | INFO     | sum of square deviations: 1690450300.0
[2025-10-14 17:07:46] 2025-10-14 14:42:24,820 | INFO     | sum of deviations: -16704212763.5
[2025-10-14 17:07:46] 2025-10-14 14:42:24,821 | INFO     | mean x: 1760447549.5
[2025-10-14 17:07:46] 2025-10-14 14:42:24,821 | INFO     | mean y: 2366891.1420454546
[2025-10-14 17:07:46] 2025-10-14 14:42:24,821 | INFO     | -- intersect: 17398258640.121708
[2025-10-14 17:07:46] 2025-10-14 14:42:24,821 | INFO     | intersect: 17398258640.121708
[2025-10-14 17:07:46] 2025-10-14 14:42:24,821 | INFO     | chi2: 0.08377859892186242
[2025-10-14 17:07:46] 2025-10-14 14:42:24,821 | INFO     | current chi2=0.08377859892186242 (change=94.17307415633684 %)
[2025-10-14 17:07:46] 2025-10-14 14:42:24,821 | INFO     | sum of square deviations: 1550429070.0
[2025-10-14 17:07:46] 2025-10-14 14:42:24,822 | INFO     | sum of deviations: -15272892873.000004
[2025-10-14 17:07:46] 2025-10-14 14:42:24,822 | INFO     | mean x: 1760447702.0
[2025-10-14 17:07:46] 2025-10-14 14:42:24,823 | INFO     | mean y: 2365303.5204678364
[2025-10-14 17:07:46] 2025-10-14 14:42:24,823 | INFO     | -- intersect: 17344099718.47506
[2025-10-14 17:07:46] 2025-10-14 14:42:24,823 | INFO     | intersect: 17344099718.47506
[2025-10-14 17:07:46] 2025-10-14 14:42:24,823 | INFO     | chi2: 0.07994217489116301
[2025-10-14 17:07:46] 2025-10-14 14:42:24,823 | INFO     | current chi2=0.07994217489116301 (change=4.579241095064761 %)
[2025-10-14 17:07:46] 2025-10-14 14:42:24,823 | INFO     | left removable region: 20
[2025-10-14 17:07:46] 2025-10-14 14:42:24,823 | INFO     | sum of square deviations: 1154663510.0
[2025-10-14 17:07:46] 2025-10-14 14:42:24,824 | INFO     | sum of deviations: -7812943439.999997
[2025-10-14 17:07:46] 2025-10-14 14:42:24,824 | INFO     | mean x: 1760447824.0
[2025-10-14 17:07:46] 2025-10-14 14:42:24,824 | INFO     | mean y: 2356805.419354839
[2025-10-14 17:07:46] 2025-10-14 14:42:24,824 | INFO     | -- intersect: 11914294057.15001
[2025-10-14 17:07:46] 2025-10-14 14:42:24,825 | INFO     | intersect: 11914294057.15001
[2025-10-14 17:07:46] 2025-10-14 14:42:24,825 | INFO     | chi2: 0.06117216940915316
[2025-10-14 17:07:46] 2025-10-14 14:42:24,825 | INFO     | -- intersect: 11914294057.15001
[2025-10-14 17:07:46] 2025-10-14 14:42:24,825 | INFO     | current memory leak: -6.77 B/s (using 155 data points, chi2=0.06)
[2025-10-14 17:07:46] 2025-10-14 14:42:24,825 | INFO     | could have reported an average CPU frequency of 2659 MHz (10 samples)
[2025-10-14 17:07:46] 2025-10-14 14:42:24,826 | INFO     | ..............................
[2025-10-14 17:07:46] 2025-10-14 14:42:24,826 | INFO     | . Timing measurements:
[2025-10-14 17:07:46] 2025-10-14 14:42:24,826 | INFO     | . get job = 0 s
[2025-10-14 17:07:46] 2025-10-14 14:42:24,826 | INFO     | . initial setup = 1 s
[2025-10-14 17:07:46] 2025-10-14 14:42:24,826 | INFO     | . payload setup = 6 s
[2025-10-14 17:07:46] 2025-10-14 14:42:24,826 | INFO     | . stage-in = 0 s
[2025-10-14 17:07:46] 2025-10-14 14:42:24,826 | INFO     | . payload execution = 11031 s
[2025-10-14 17:07:46] 2025-10-14 14:42:24,826 | INFO     | . stage-out = 0 s
[2025-10-14 17:07:46] 2025-10-14 14:42:24,826 | INFO     | . log creation = 0 s
[2025-10-14 17:07:46] 2025-10-14 14:42:24,826 | INFO     | ..............................
[2025-10-14 17:07:46] 2025-10-14 14:42:25,398 | INFO     | 
[2025-10-14 17:07:46] 2025-10-14 14:42:25,398 | INFO     | job summary report
[2025-10-14 17:07:46] 2025-10-14 14:42:25,398 | INFO     | --------------------------------------------------
[2025-10-14 17:07:46] 2025-10-14 14:42:25,399 | INFO     | PanDA job id: 6841276472
[2025-10-14 17:07:46] 2025-10-14 14:42:25,399 | INFO     | task id: 46676269
[2025-10-14 17:07:46] 2025-10-14 14:42:25,399 | INFO     | errors: (none)
[2025-10-14 17:07:46] 2025-10-14 14:42:25,399 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-14 17:07:46] 2025-10-14 14:42:25,399 | INFO     | pilot state: finished 
[2025-10-14 17:07:46] 2025-10-14 14:42:25,399 | INFO     | transexitcode: 0
[2025-10-14 17:07:46] 2025-10-14 14:42:25,399 | INFO     | exeerrorcode: 0
[2025-10-14 17:07:46] 2025-10-14 14:42:25,399 | INFO     | exeerrordiag: 
[2025-10-14 17:07:46] 2025-10-14 14:42:25,399 | INFO     | exitcode: 0
[2025-10-14 17:07:46] 2025-10-14 14:42:25,399 | INFO     | exitmsg: OK
[2025-10-14 17:07:46] 2025-10-14 14:42:25,399 | INFO     | cpuconsumptiontime: 41321 s
[2025-10-14 17:07:46] 2025-10-14 14:42:25,399 | INFO     | nevents: 400
[2025-10-14 17:07:46] 2025-10-14 14:42:25,399 | INFO     | neventsw: 0
[2025-10-14 17:07:46] 2025-10-14 14:42:25,399 | INFO     | pid: 3324269
[2025-10-14 17:07:46] 2025-10-14 14:42:25,400 | INFO     | pgrp: 3324269
[2025-10-14 17:07:46] 2025-10-14 14:42:25,400 | INFO     | corecount: 4
[2025-10-14 17:07:46] 2025-10-14 14:42:25,400 | INFO     | event service: False
[2025-10-14 17:07:46] 2025-10-14 14:42:25,400 | INFO     | sizes: {0: 2348818, 5: 2349080, 11: 2349136, 11041: 2378438, 11043: 2387522, 11044: 2387578, 11049: 2387900}
[2025-10-14 17:07:46] 2025-10-14 14:42:25,400 | INFO     | --------------------------------------------------
[2025-10-14 17:07:46] 2025-10-14 14:42:25,400 | INFO     | 
[2025-10-14 17:07:46] 2025-10-14 14:42:25,400 | INFO     | executing command: ls -lF /scratch/boinc/var/slot56/slots/0
[2025-10-14 17:07:46] 2025-10-14 14:42:25,423 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-14 17:07:46] 2025-10-14 14:42:25,424 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-14 17:07:46] 2025-10-14 14:42:25,424 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-14 17:07:46] 2025-10-14 14:42:25,424 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-14 17:07:46] 2025-10-14 14:42:25,424 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-14 17:07:46] 2025-10-14 14:42:25,424 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-14 17:07:46] 2025-10-14 14:42:25,424 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-14 17:07:46] 2025-10-14 14:42:25,424 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-14 17:07:46] 2025-10-14 14:42:25,424 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-14 17:07:46] 2025-10-14 14:42:25,424 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-14 17:07:46] 2025-10-14 14:42:25,425 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-14 17:07:46] 2025-10-14 14:42:25,425 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-14 17:07:46] 2025-10-14 14:42:25,425 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-14 17:07:46] 2025-10-14 14:42:25,425 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-14 17:07:46] 2025-10-14 14:42:25,425 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-14 17:07:46] 2025-10-14 14:42:25,425 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-14 17:07:46] 2025-10-14 14:42:25,425 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-14 17:07:46] 2025-10-14 14:42:25,425 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-14 17:07:46] 2025-10-14 14:42:25,425 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-14 17:07:46] 2025-10-14 14:42:25,425 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-14 17:07:46] 2025-10-14 14:42:25,426 | INFO     | job 6841276472 has completed (purged errors)
[2025-10-14 17:07:46] 2025-10-14 14:42:25,426 | INFO     | overall cleanup function is called
[2025-10-14 17:07:46] 2025-10-14 14:42:26,434 | INFO     | --- collectZombieJob: --- 10, [3324269]
[2025-10-14 17:07:46] 2025-10-14 14:42:26,434 | INFO     | zombie collector waiting for pid 3324269
[2025-10-14 17:07:46] 2025-10-14 14:42:26,434 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-14 17:07:46] 2025-10-14 14:42:26,435 | INFO     | collected zombie processes
[2025-10-14 17:07:46] 2025-10-14 14:42:26,435 | INFO     | will attempt to kill all subprocesses of pid=3324269
[2025-10-14 17:07:46] 2025-10-14 14:42:26,799 | INFO     | process IDs to be killed: [3324269] (in reverse order)
[2025-10-14 17:07:46] 2025-10-14 14:42:26,909 | WARNING  | found no corresponding commands to process id(s)
[2025-10-14 17:07:46] 2025-10-14 14:42:26,909 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-14 17:07:46] 2025-10-14 14:42:26,922 | INFO     | did not find any defunct processes belonging to 3324269
[2025-10-14 17:07:46] 2025-10-14 14:42:26,934 | INFO     | did not find any defunct processes belonging to 3324269
[2025-10-14 17:07:46] 2025-10-14 14:42:26,934 | INFO     | ready for new job
[2025-10-14 17:07:46] 2025-10-14 14:42:26,934 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-14 17:07:46] 2025-10-14 14:42:26,936 | INFO     | ***************************************
[2025-10-14 17:07:46] 2025-10-14 14:42:26,937 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-14 17:07:46] 2025-10-14 14:42:26,937 | INFO     | ***************************************
[2025-10-14 17:07:46] 2025-10-14 14:42:26,937 | INFO     | 
[2025-10-14 17:07:46] 2025-10-14 14:42:26,940 | INFO     | architecture information:
[2025-10-14 17:07:46] 2025-10-14 14:42:26,941 | INFO     | executing command: cat /etc/os-release
[2025-10-14 17:07:46] 2025-10-14 14:42:26,955 | INFO     | cat /etc/os-release:
[2025-10-14 17:07:46] NAME="CentOS Linux"
[2025-10-14 17:07:46] VERSION="7 (Core)"
[2025-10-14 17:07:46] ID="centos"
[2025-10-14 17:07:46] ID_LIKE="rhel fedora"
[2025-10-14 17:07:46] VERSION_ID="7"
[2025-10-14 17:07:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-14 17:07:46] ANSI_COLOR="0;31"
[2025-10-14 17:07:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-14 17:07:46] HOME_URL="https://www.centos.org/"
[2025-10-14 17:07:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-14 17:07:46] 
[2025-10-14 17:07:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-14 17:07:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-14 17:07:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-14 17:07:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-14 17:07:46] 
[2025-10-14 17:07:46] 2025-10-14 14:42:26,956 | INFO     | ***************************************
[2025-10-14 17:07:46] 2025-10-14 14:42:27,459 | INFO     | executing command: df -mP /scratch/boinc/var/slot56/slots/0
[2025-10-14 17:07:46] 2025-10-14 14:42:27,476 | INFO     | sufficient remaining disk space (703616516096 B)
[2025-10-14 17:07:46] 2025-10-14 14:42:27,477 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-14 17:07:46] 2025-10-14 14:42:27,477 | INFO     | current server update state: UPDATING_FINAL
[2025-10-14 17:07:46] 2025-10-14 14:42:27,477 | INFO     | update_server=False
[2025-10-14 17:07:46] 2025-10-14 14:42:27,477 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-14 17:07:46] 2025-10-14 14:42:27,477 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-14 17:07:46] 2025-10-14 14:42:27,490 | INFO     | all data control threads have been joined
[2025-10-14 17:07:46] 2025-10-14 14:42:27,658 | INFO     | all job control threads have been joined
[2025-10-14 17:07:46] 2025-10-14 14:42:27,796 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-14 17:07:46] 2025-10-14 14:42:27,797 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-14 17:07:46] 2025-10-14 14:42:27,797 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-14 17:07:46] 2025-10-14 14:42:27,797 | INFO     | will abort loop
[2025-10-14 17:07:46] 2025-10-14 14:42:28,483 | INFO     | [job] retrieve thread has finished
[2025-10-14 17:07:46] 2025-10-14 14:42:28,495 | INFO     | [data] control thread has finished
[2025-10-14 17:07:46] 2025-10-14 14:42:28,496 | INFO     | [job] validate thread has finished
[2025-10-14 17:07:46] 2025-10-14 14:42:28,517 | INFO     | [payload] failed_post thread has finished
[2025-10-14 17:07:46] 2025-10-14 14:42:28,589 | INFO     | all payload control threads have been joined
[2025-10-14 17:07:46] 2025-10-14 14:42:28,663 | INFO     | [job] control thread has finished
[2025-10-14 17:07:46] 2025-10-14 14:42:28,802 | INFO     | [job] job monitor thread has finished
[2025-10-14 17:07:46] 2025-10-14 14:42:29,070 | INFO     | [data] copytool_in thread has finished
[2025-10-14 17:07:46] 2025-10-14 14:42:29,136 | INFO     | [payload] validate_pre thread has finished
[2025-10-14 17:07:46] 2025-10-14 14:42:29,207 | INFO     | [payload] validate_post thread has finished
[2025-10-14 17:07:46] 2025-10-14 14:42:29,291 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-14 17:07:46] 2025-10-14 14:42:29,483 | INFO     | [data] copytool_out thread has finished
[2025-10-14 17:07:46] 2025-10-14 14:42:29,592 | INFO     | [payload] control thread has finished
[2025-10-14 17:07:46] 2025-10-14 14:42:29,868 | INFO     | [job] create_data_payload thread has finished
[2025-10-14 17:07:46] 2025-10-14 14:42:29,929 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-14 17:07:46] 2025-10-14 14:42:29,929 | INFO     | [payload] execute_payloads thread has finished
[2025-10-14 17:07:46] 2025-10-14 14:42:30,786 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-14 17:07:46] 2025-10-14 14:42:30,934 | INFO     | [job] queue monitor thread has finished
[2025-10-14 17:07:46] 2025-10-14 14:42:34,790 | INFO     | [data] queue_monitor thread has finished
[2025-10-14 17:07:46] 2025-10-14 14:42:57,081 | INFO     | PID=3310095 has CPU usage=7.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-14 17:07:46] 2025-10-14 14:42:57,081 | INFO     | .. there are 6 such processes running
[2025-10-14 17:07:46] 2025-10-14 14:42:57,081 | INFO     | found 0 job(s) in 20 queues
[2025-10-14 17:07:46] 2025-10-14 14:42:57,082 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-14 17:07:46] 2025-10-14 14:42:57,082 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-14 17:07:46] 2025-10-14 14:43:18,387 | INFO     | [monitor] cgroup control has ended
[2025-10-14 17:07:46] 2025-10-14 14:43:18,602 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23334687622976)>', '<ExcThread(monitor, started 23334441928448)>']
[2025-10-14 17:07:46] 2025-10-14 14:43:19,161 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-14 17:07:46] 2025-10-14 14:43:19,161 | INFO     | [monitor] control thread has ended
[2025-10-14 17:07:46] 2025-10-14 14:43:23,622 | INFO     | all workflow threads have been joined
[2025-10-14 17:07:46] 2025-10-14 14:43:23,622 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-14 17:07:46] 2025-10-14 14:43:23,622 | INFO     | traces error code: 0
[2025-10-14 17:07:46] 2025-10-14 14:43:23,623 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-14 17:07:46] 2025-10-14 14:43:23,753 [wrapper] ==== pilot stdout END ====
[2025-10-14 17:07:46] 2025-10-14 14:43:23,756 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-14 17:07:46] 2025-10-14 14:43:23,759 [wrapper] pilotpid: 3310095
[2025-10-14 17:07:46] 2025-10-14 14:43:23,761 [wrapper] Pilot exit status: 0
[2025-10-14 17:07:46] 2025-10-14 14:43:23,770 [wrapper] pandaids: 6841276472
[2025-10-14 17:07:46] 2025-10-14 14:43:23,841 [wrapper] cleanup supervisor_pilot 3618842 3310096
[2025-10-14 17:07:46] 2025-10-14 14:43:23,844 [wrapper] Test setup, not cleaning
[2025-10-14 17:07:46] 2025-10-14 14:43:23,847 [wrapper] apfmon messages muted
[2025-10-14 17:07:46] 2025-10-14 14:43:23,850 [wrapper] ==== wrapper stdout END ====
[2025-10-14 17:07:46] 2025-10-14 14:43:23,852 [wrapper] ==== wrapper stderr END ====
[2025-10-14 17:07:46]  *** Error codes and diagnostics ***
[2025-10-14 17:07:46]     "exeErrorCode": 0,
[2025-10-14 17:07:46]     "exeErrorDiag": "",
[2025-10-14 17:07:46]     "pilotErrorCode": 0,
[2025-10-14 17:07:46]     "pilotErrorDiag": "",
[2025-10-14 17:07:46]  *** Listing of results directory ***
[2025-10-14 17:07:46] total 407840
[2025-10-14 17:07:46] -rw-r--r-- 1 boinc boinc    557409 Oct 13 04:00 pilot3.tar.gz
[2025-10-14 17:07:46] -rwx------ 1 boinc boinc     36292 Oct 13 04:26 runpilot2-wrapper.sh
[2025-10-14 17:07:46] -rw-r--r-- 1 boinc boinc      5112 Oct 13 04:26 queuedata.json
[2025-10-14 17:07:46] -rw-r--r-- 1 boinc boinc       100 Oct 14 13:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-14 17:07:46] -rwxr-xr-x 1 boinc boinc      7986 Oct 14 13:37 run_atlas
[2025-10-14 17:07:46] -rw-r--r-- 1 boinc boinc       105 Oct 14 13:37 job.xml
[2025-10-14 17:07:46] -rw-r--r-- 1 boinc boinc      6635 Oct 14 13:37 init_data.xml
[2025-10-14 17:07:46] -rw-r--r-- 2 boinc boinc 219956059 Oct 14 13:37 EVNT.46676267._002292.pool.root.1
[2025-10-14 17:07:46] -rw-r--r-- 2 boinc boinc     15120 Oct 14 13:37 start_atlas.sh
[2025-10-14 17:07:46] drwxrwx--x 2 boinc boinc      4096 Oct 14 13:37 shared
[2025-10-14 17:07:46] -rw-r--r-- 2 boinc boinc    569685 Oct 14 13:37 input.tar.gz
[2025-10-14 17:07:46] -rw-r--r-- 1 boinc boinc         0 Oct 14 13:37 boinc_lockfile
[2025-10-14 17:07:46] -rw-r--r-- 1 boinc boinc      2550 Oct 14 13:37 pandaJob.out
[2025-10-14 17:07:46] -rw------- 1 boinc boinc    973972 Oct 14 13:37 agis_schedconf.cvmfs.json
[2025-10-14 17:07:46] drwx------ 5 boinc boinc      4096 Oct 14 13:38 pilot3
[2025-10-14 17:07:46] -rw------- 1 boinc boinc 189876096 Oct 14 16:41 HITS.46676269._094976.pool.root.1
[2025-10-14 17:07:46] -rw-r--r-- 1 boinc boinc       528 Oct 14 16:41 boinc_task_state.xml
[2025-10-14 17:07:46] -rw------- 1 boinc boinc        95 Oct 14 16:41 pilot_heartbeat.json
[2025-10-14 17:07:46] -rw------- 1 boinc boinc      1029 Oct 14 16:42 memory_monitor_summary.json
[2025-10-14 17:07:46] -rw------- 1 boinc boinc   1560740 Oct 14 16:42 agis_ddmendpoints.agis.ALL.json
[2025-10-14 17:07:46] -rw------- 1 boinc boinc    376675 Oct 14 16:42 log.46676269._094976.job.log.tgz.1
[2025-10-14 17:07:46] -rw------- 1 boinc boinc      7830 Oct 14 16:42 heartbeat.json
[2025-10-14 17:07:46] -rw------- 1 boinc boinc      5019 Oct 14 16:43 pilotlog.txt
[2025-10-14 17:07:46] -rw------- 1 boinc boinc   1570520 Oct 14 16:43 log.46676269._094976.job.log.1
[2025-10-14 17:07:46] -rw------- 1 boinc boinc       357 Oct 14 16:43 output.list
[2025-10-14 17:07:46] -rw-r--r-- 1 boinc boinc       620 Oct 14 16:43 runtime_log
[2025-10-14 17:07:46] -rw------- 1 boinc boinc   1966080 Oct 14 16:43 result.tar.gz
[2025-10-14 17:07:46] -rw------- 1 boinc boinc       665 Oct 14 16:43 yapMDmtRNS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmVXVMDm0Uf2Tm.diag
[2025-10-14 17:07:46] -rw-r--r-- 1 boinc boinc      9070 Oct 14 16:43 runtime_log.err
[2025-10-14 17:07:46] -rw-r--r-- 1 boinc boinc        27 Oct 14 17:07 wrapper_checkpoint.txt
[2025-10-14 17:07:46] -rw-r--r-- 1 boinc boinc      8192 Oct 14 17:07 boinc_mmap_file
[2025-10-14 17:07:46] -rw-r--r-- 1 boinc boinc     20888 Oct 14 17:07 stderr.txt
[2025-10-14 17:07:46] HITS file was successfully produced:
[2025-10-14 17:07:46] -rw------- 1 boinc boinc 189876096 Oct 14 16:41 shared/HITS.pool.root.1
[2025-10-14 17:07:46]  *** Contents of shared directory: ***
[2025-10-14 17:07:46] total 402736
[2025-10-14 17:07:46] -rw-r--r-- 2 boinc boinc 219956059 Oct 14 13:37 ATLAS.root_0
[2025-10-14 17:07:46] -rw-r--r-- 2 boinc boinc     15120 Oct 14 13:37 start_atlas.sh
[2025-10-14 17:07:46] -rw-r--r-- 2 boinc boinc    569685 Oct 14 13:37 input.tar.gz
[2025-10-14 17:07:46] -rw------- 1 boinc boinc 189876096 Oct 14 16:41 HITS.pool.root.1
[2025-10-14 17:07:46] -rw------- 1 boinc boinc   1966080 Oct 14 16:43 result.tar.gz
17:07:48 (3305717): run_atlas exited; CPU time 41774.449536
17:07:48 (3305717): called boinc_finish(0)

</stderr_txt>
]]>

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