Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
20:47:00 (3546712): wrapper (7.7.26015): starting
20:47:00 (3546712): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 20:47:00] Arguments: --nthreads 3
[2025-10-13 20:47:00] Threads: 3
[2025-10-13 20:47:00] Checking for CVMFS
[2025-10-13 20:47:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 20:47:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 20:47:00] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 20:47:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 20:47:00] 2.9.2.0 1676327 6104 88632 151670 0 57 29756039 36864001 0 130560 0 4922828 99.991 209548 706 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 20:47:00] CVMFS is ok
[2025-10-13 20:47:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 20:47:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 20:47:00] Further information can be found at the LHC@home message board.
[2025-10-13 20:47:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 20:47:00] Checking for apptainer binary...
[2025-10-13 20:47:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 20:47:00] Running /usr/bin/apptainer --version
[2025-10-13 20:47:00] apptainer version 1.4.1-1.1
[2025-10-13 20:47:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 20:47:00] atlasA303a
[2025-10-13 20:47:00] apptainer works
[2025-10-13 20:47:00] Set ATHENA_PROC_NUMBER=3
[2025-10-13 20:47:00] Set ATHENA_CORE_NUMBER=3
[2025-10-13 20:47:00] Starting ATLAS job with PandaID=6840970236
[2025-10-13 20:47:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 22:06:28]  *** The last 200 lines of the pilot log: ***
[2025-10-13 22:06:28] 2025-10-13 20:06:10,980 | INFO     | aborting loop
[2025-10-13 22:06:28] 2025-10-13 20:06:11,512 | INFO     | all data control threads have been joined
[2025-10-13 22:06:28] 2025-10-13 20:06:11,580 | INFO     | all payload control threads have been joined
[2025-10-13 22:06:28] 2025-10-13 20:06:11,601 | INFO     | [monitor] cgroup control has ended
[2025-10-13 22:06:28] 2025-10-13 20:06:11,604 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 22:06:28] 2025-10-13 20:06:11,878 | INFO     | [job] retrieve thread has finished
[2025-10-13 22:06:28] 2025-10-13 20:06:11,986 | INFO     | [job] job monitor thread has finished
[2025-10-13 22:06:28] 2025-10-13 20:06:12,001 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 22:06:28] 2025-10-13 20:06:12,016 | INFO     | all job control threads have been joined
[2025-10-13 22:06:28] 2025-10-13 20:06:12,367 | INFO     | [payload] validate_post thread has finished
[2025-10-13 22:06:28] 2025-10-13 20:06:12,518 | INFO     | [data] control thread has finished
[2025-10-13 22:06:28] 2025-10-13 20:06:12,586 | INFO     | [payload] control thread has finished
[2025-10-13 22:06:28] 2025-10-13 20:06:12,759 | INFO     | [data] copytool_in thread has finished
[2025-10-13 22:06:28] 2025-10-13 20:06:12,839 | INFO     | [payload] failed_post thread has finished
[2025-10-13 22:06:28] 2025-10-13 20:06:12,942 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 22:06:28] 2025-10-13 20:06:13,022 | INFO     | [job] control thread has finished
[2025-10-13 22:06:28] 2025-10-13 20:06:13,057 | INFO     | [job] validate thread has finished
[2025-10-13 22:06:28] 2025-10-13 20:06:13,099 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 22:06:28] 2025-10-13 20:06:13,128 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 22:06:28] 2025-10-13 20:06:13,610 | INFO     | [data] copytool_out thread has finished
[2025-10-13 22:06:28] 2025-10-13 20:06:13,756 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 22:06:28] 2025-10-13 20:06:14,762 | INFO     | [job] queue monitor thread has finished
[2025-10-13 22:06:28] 2025-10-13 20:06:16,008 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 22:06:28] 2025-10-13 20:06:21,572 | INFO     | job.realtimelogging is not enabled
[2025-10-13 22:06:28] 2025-10-13 20:06:22,578 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 22:06:28] 2025-10-13 20:06:23,159 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140274201319232)>', '<ExcThread(monitor, started 140273363449600)>']
[2025-10-13 22:06:28] 2025-10-13 20:06:23,939 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 22:06:28] 2025-10-13 20:06:23,939 | INFO     | [monitor] control thread has ended
[2025-10-13 22:06:28] 2025-10-13 20:06:28,164 | INFO     | all workflow threads have been joined
[2025-10-13 22:06:28] 2025-10-13 20:06:28,164 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 22:06:28] 2025-10-13 20:06:28,164 | INFO     | traces error code: 0
[2025-10-13 22:06:28] 2025-10-13 20:06:28,165 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 22:06:28] 2025-10-13 20:06:28,215 [wrapper] ==== pilot stdout END ====
[2025-10-13 22:06:28] 2025-10-13 20:06:28,217 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 22:06:28] 2025-10-13 20:06:28,220 [wrapper] pilotpid: 3550437
[2025-10-13 22:06:28] 2025-10-13 20:06:28,222 [wrapper] Pilot exit status: 0
[2025-10-13 22:06:28] 2025-10-13 20:06:28,230 [wrapper] pandaids: 6840970236
[2025-10-13 22:06:28] 2025-10-13 20:06:28,247 [wrapper] cleanup supervisor_pilot 3569523 3550438
[2025-10-13 22:06:28] 2025-10-13 20:06:28,249 [wrapper] Test setup, not cleaning
[2025-10-13 22:06:28] 2025-10-13 20:06:28,252 [wrapper] apfmon messages muted
[2025-10-13 22:06:28] 2025-10-13 20:06:28,254 [wrapper] ==== wrapper stdout END ====
[2025-10-13 22:06:28] 2025-10-13 20:06:28,256 [wrapper] ==== wrapper stderr END ====
[2025-10-13 22:06:28]  *** Error codes and diagnostics ***
[2025-10-13 22:06:28]     "exeErrorCode": 0,
[2025-10-13 22:06:28]     "exeErrorDiag": "",
[2025-10-13 22:06:28]     "pilotErrorCode": 0,
[2025-10-13 22:06:28]     "pilotErrorDiag": "",
[2025-10-13 22:06:28]  *** Listing of results directory ***
[2025-10-13 22:06:28] total 405300
[2025-10-13 22:06:28] -rwx------ 1 boinc boinc     36292 Oct 13 02:02 runpilot2-wrapper.sh
[2025-10-13 22:06:28] -rw-r--r-- 1 boinc boinc      5112 Oct 13 02:02 queuedata.json
[2025-10-13 22:06:28] -rw-r--r-- 1 boinc boinc    557409 Oct 13 02:02 pilot3.tar.gz
[2025-10-13 22:06:28] -rw-r--r-- 1 boinc boinc       100 Oct 13 20:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 22:06:28] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 20:46 run_atlas
[2025-10-13 22:06:28] -rw-r--r-- 1 boinc boinc       105 Oct 13 20:46 job.xml
[2025-10-13 22:06:28] -rw-r--r-- 2 boinc boinc 220987066 Oct 13 20:47 EVNT.46676267._004675.pool.root.1
[2025-10-13 22:06:28] -rw-r--r-- 2 boinc boinc    569672 Oct 13 20:47 input.tar.gz
[2025-10-13 22:06:28] -rw-r--r-- 2 boinc boinc     15120 Oct 13 20:47 start_atlas.sh
[2025-10-13 22:06:28] drwxrwx--x 2 boinc boinc      4096 Oct 13 20:47 shared
[2025-10-13 22:06:28] -rw-r--r-- 1 boinc boinc         0 Oct 13 20:47 boinc_setup_complete
[2025-10-13 22:06:28] -rw-r--r-- 1 boinc boinc      6450 Oct 13 20:47 init_data.xml
[2025-10-13 22:06:28] -rw-r--r-- 1 boinc boinc         0 Oct 13 20:47 boinc_lockfile
[2025-10-13 22:06:28] -rw-r--r-- 1 boinc boinc      2550 Oct 13 20:47 pandaJob.out
[2025-10-13 22:06:28] -rw------- 1 boinc boinc    972799 Oct 13 20:47 agis_schedconf.cvmfs.json
[2025-10-13 22:06:28] -rw------- 1 boinc boinc   1560580 Oct 13 20:47 agis_ddmendpoints.agis.ALL.json
[2025-10-13 22:06:28] drwx------ 5 boinc boinc      4096 Oct 13 20:47 pilot3
[2025-10-13 22:06:28] -rw------- 1 boinc boinc        95 Oct 13 22:05 pilot_heartbeat.json
[2025-10-13 22:06:28] -rw------- 1 boinc boinc 188250411 Oct 13 22:05 HITS.46676269._092656.pool.root.1
[2025-10-13 22:06:28] -rw-r--r-- 1 boinc boinc       529 Oct 13 22:05 boinc_task_state.xml
[2025-10-13 22:06:28] -rw------- 1 boinc boinc      1014 Oct 13 22:05 memory_monitor_summary.json
[2025-10-13 22:06:28] -rw------- 1 boinc boinc    250892 Oct 13 22:05 log.46676269._092656.job.log.tgz.1
[2025-10-13 22:06:28] -rw-r--r-- 1 boinc boinc      8192 Oct 13 22:06 boinc_mmap_file
[2025-10-13 22:06:28] -rw-r--r-- 1 boinc boinc        27 Oct 13 22:06 wrapper_checkpoint.txt
[2025-10-13 22:06:28] -rw------- 1 boinc boinc      7756 Oct 13 22:06 heartbeat.json
[2025-10-13 22:06:28] -rw------- 1 boinc boinc      4628 Oct 13 22:06 pilotlog.txt
[2025-10-13 22:06:28] -rw------- 1 boinc boinc    699770 Oct 13 22:06 log.46676269._092656.job.log.1
[2025-10-13 22:06:28] -rw------- 1 boinc boinc       357 Oct 13 22:06 output.list
[2025-10-13 22:06:28] -rw-r--r-- 1 boinc boinc       620 Oct 13 22:06 runtime_log
[2025-10-13 22:06:28] -rw------- 1 boinc boinc    972800 Oct 13 22:06 result.tar.gz
[2025-10-13 22:06:28] -rw------- 1 boinc boinc       662 Oct 13 22:06 vAwMDmxBLS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmJKVMDmZHnPtn.diag
[2025-10-13 22:06:28] -rw-r--r-- 1 boinc boinc      8797 Oct 13 22:06 runtime_log.err
[2025-10-13 22:06:28] -rw-r--r-- 1 boinc boinc      6610 Oct 13 22:06 stderr.txt
[2025-10-13 22:06:28] HITS file was successfully produced:
[2025-10-13 22:06:28] -rw------- 1 boinc boinc 188250411 Oct 13 22:05 shared/HITS.pool.root.1
[2025-10-13 22:06:28]  *** Contents of shared directory: ***
[2025-10-13 22:06:28] total 401184
[2025-10-13 22:06:28] -rw-r--r-- 2 boinc boinc 220987066 Oct 13 20:47 ATLAS.root_0
[2025-10-13 22:06:28] -rw-r--r-- 2 boinc boinc    569672 Oct 13 20:47 input.tar.gz
[2025-10-13 22:06:28] -rw-r--r-- 2 boinc boinc     15120 Oct 13 20:47 start_atlas.sh
[2025-10-13 22:06:28] -rw------- 1 boinc boinc 188250411 Oct 13 22:05 HITS.pool.root.1
[2025-10-13 22:06:28] -rw------- 1 boinc boinc    972800 Oct 13 22:06 result.tar.gz
22:06:29 (3546712): run_atlas exited; CPU time 13475.349672
22:06:29 (3546712): called boinc_finish(0)

</stderr_txt>
]]>

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