Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
19:39:51 (84198): wrapper (7.7.26015): starting
19:39:51 (84198): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 19:39:51] Arguments: --nthreads 4
[2025-10-13 19:39:51] Threads: 4
[2025-10-13 19:39:51] Checking for CVMFS
[2025-10-13 19:39:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 19:39:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 19:39:51] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 19:39:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 19:39:51] 2.9.2.0 2186487 6039 101036 151668 1 57 28792298 36864001 0 130560 0 5435383 99.992 208416 863 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 19:39:51] CVMFS is ok
[2025-10-13 19:39:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 19:39:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 19:39:51] Further information can be found at the LHC@home message board.
[2025-10-13 19:39:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 19:39:51] Checking for apptainer binary...
[2025-10-13 19:39:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 19:39:51] Running /usr/bin/apptainer --version
[2025-10-13 19:39:51] apptainer version 1.4.1-1.1
[2025-10-13 19:39:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 19:39:51] belleA253c
[2025-10-13 19:39:51] apptainer works
[2025-10-13 19:39:51] Set ATHENA_PROC_NUMBER=4
[2025-10-13 19:39:51] Set ATHENA_CORE_NUMBER=4
[2025-10-13 19:39:52] Starting ATLAS job with PandaID=6841124546
[2025-10-13 19:39:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 20:54:12]  *** The last 200 lines of the pilot log: ***
[2025-10-13 20:54:12]  replicas=None
[2025-10-13 20:54:12]  scope=mc23_13p6TeV
[2025-10-13 20:54:12]  status=None
[2025-10-13 20:54:12]  status_code=0
[2025-10-13 20:54:12]  storage_token=
[2025-10-13 20:54:12]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6841124546/log.46676269._094413.job.log.tgz.1
[2025-10-13 20:54:12]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/db/f0/log.46676269._094413.job.log.tgz.1
[2025-10-13 20:54:12]  workdir=None
[2025-10-13 20:54:12] ]
[2025-10-13 20:54:12] 2025-10-13 18:53:31,560 | INFO     | transferring file log.46676269._094413.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6841124546/log.46676269._094413.job.log.tgz.1 to /local/data/boinc/
[2025-10-13 20:54:12] 2025-10-13 18:53:31,561 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6841124546/log.46676269._094413.job.log.tgz.1 /local/data/boinc/slots/0/log.46676269._0944
[2025-10-13 20:54:12] 2025-10-13 18:53:31,581 | INFO     | adding to output.list: log.46676269._094413.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/db/f0/log.46676269._094413.job.log.tg
[2025-10-13 20:54:12] 2025-10-13 18:53:31,581 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 20:54:12] 2025-10-13 18:53:31,581 | INFO     | summary of transferred files:
[2025-10-13 20:54:12] 2025-10-13 18:53:31,581 | INFO     |  -- lfn=log.46676269._094413.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 20:54:12] 2025-10-13 18:53:31,582 | INFO     | stage-out finished correctly
[2025-10-13 20:54:12] 2025-10-13 18:53:31,622 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 20:54:12] 2025-10-13 18:53:31,989 | INFO     | time since job start (4411s) is within the limit (172800.0s)
[2025-10-13 20:54:12] 2025-10-13 18:53:32,181 | INFO     | monitor loop #341: job 0:6841124546 is in state 'finished'
[2025-10-13 20:54:12] 2025-10-13 18:53:32,181 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 20:54:12] 2025-10-13 18:53:32,503 | INFO     | job 6841124546 has state=finished
[2025-10-13 20:54:12] 2025-10-13 18:53:32,503 | INFO     | preparing for final server update for job 6841124546 in state='finished'
[2025-10-13 20:54:12] 2025-10-13 18:53:32,503 | INFO     | this job has now completed (state=finished)
[2025-10-13 20:54:12] 2025-10-13 18:53:32,504 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 20:54:12] 2025-10-13 18:53:32,504 | INFO     | log transfer has been attempted: DONE
[2025-10-13 20:54:12] 2025-10-13 18:53:32,504 | INFO     | job 6841124546 has finished - writing final server update
[2025-10-13 20:54:12] 2025-10-13 18:53:32,504 | INFO     | total number of processed events: 400 (read)
[2025-10-13 20:54:12] 2025-10-13 18:53:32,504 | INFO     | executing command: lscpu
[2025-10-13 20:54:12] 2025-10-13 18:53:32,526 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 20:54:12] 2025-10-13 18:53:33,995 | INFO     | time since job start (4413s) is within the limit (172800.0s)
[2025-10-13 20:54:12] 2025-10-13 18:53:34,684 | INFO     | monitor loop #342: job 0:6841124546 is in state 'finished'
[2025-10-13 20:54:12] 2025-10-13 18:53:34,684 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 20:54:12] 2025-10-13 18:53:36,001 | INFO     | time since job start (4416s) is within the limit (172800.0s)
[2025-10-13 20:54:12] 2025-10-13 18:53:37,187 | INFO     | monitor loop #343: job 0:6841124546 is in state 'finished'
[2025-10-13 20:54:12] 2025-10-13 18:53:37,187 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 20:54:12] 2025-10-13 18:53:37,536 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 20:54:12] 2025-10-13 18:53:37,538 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3502.4061249999995
[2025-10-13 20:54:12] 2025-10-13 18:53:37,540 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6841124546/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 20:54:12] 2025-10-13 18:53:37,540 | INFO     | extracted standard info from prmon json
[2025-10-13 20:54:12] 2025-10-13 18:53:37,540 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 20:54:12] 2025-10-13 18:53:37,540 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 20:54:12] 2025-10-13 18:53:37,540 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 20:54:12] 2025-10-13 18:53:37,540 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 20:54:12] 2025-10-13 18:53:37,541 | INFO     | fitting pss+swap vs Time
[2025-10-13 20:54:12] 2025-10-13 18:53:37,541 | INFO     | sum of square deviations: 85136480.0
[2025-10-13 20:54:12] 2025-10-13 18:53:37,541 | INFO     | sum of deviations: -9330971262.0
[2025-10-13 20:54:12] 2025-10-13 18:53:37,541 | INFO     | mean x: 1760379480.0
[2025-10-13 20:54:12] 2025-10-13 18:53:37,541 | INFO     | mean y: 2505170.2461538464
[2025-10-13 20:54:12] 2025-10-13 18:53:37,541 | INFO     | -- intersect: 192940366097.7182
[2025-10-13 20:54:12] 2025-10-13 18:53:37,542 | INFO     | intersect: 192940366097.7182
[2025-10-13 20:54:12] 2025-10-13 18:53:37,542 | INFO     | chi2: 0.07093924926463958
[2025-10-13 20:54:12] 2025-10-13 18:53:37,542 | INFO     | -- intersect: 192940366097.7182
[2025-10-13 20:54:12] 2025-10-13 18:53:37,542 | INFO     | current memory leak: -109.60 B/s (using 65 data points, chi2=0.07)
[2025-10-13 20:54:12] 2025-10-13 18:53:37,542 | INFO     | could have reported an average CPU frequency of 3699 MHz (6 samples)
[2025-10-13 20:54:12] 2025-10-13 18:53:37,542 | INFO     | ..............................
[2025-10-13 20:54:12] 2025-10-13 18:53:37,542 | INFO     | . Timing measurements:
[2025-10-13 20:54:12] 2025-10-13 18:53:37,542 | INFO     | . get job = 0 s
[2025-10-13 20:54:12] 2025-10-13 18:53:37,542 | INFO     | . initial setup = 1 s
[2025-10-13 20:54:12] 2025-10-13 18:53:37,542 | INFO     | . payload setup = 4 s
[2025-10-13 20:54:12] 2025-10-13 18:53:37,542 | INFO     | . stage-in = 0 s
[2025-10-13 20:54:12] 2025-10-13 18:53:37,542 | INFO     | . payload execution = 4388 s
[2025-10-13 20:54:12] 2025-10-13 18:53:37,542 | INFO     | . stage-out = 0 s
[2025-10-13 20:54:12] 2025-10-13 18:53:37,542 | INFO     | . log creation = 0 s
[2025-10-13 20:54:12] 2025-10-13 18:53:37,542 | INFO     | ..............................
[2025-10-13 20:54:12] 2025-10-13 18:53:37,584 | INFO     | 
[2025-10-13 20:54:12] 2025-10-13 18:53:37,584 | INFO     | job summary report
[2025-10-13 20:54:12] 2025-10-13 18:53:37,584 | INFO     | --------------------------------------------------
[2025-10-13 20:54:12] 2025-10-13 18:53:37,584 | INFO     | PanDA job id: 6841124546
[2025-10-13 20:54:12] 2025-10-13 18:53:37,584 | INFO     | task id: 46676269
[2025-10-13 20:54:12] 2025-10-13 18:53:37,584 | INFO     | errors: (none)
[2025-10-13 20:54:12] 2025-10-13 18:53:37,584 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 20:54:12] 2025-10-13 18:53:37,584 | INFO     | pilot state: finished 
[2025-10-13 20:54:12] 2025-10-13 18:53:37,584 | INFO     | transexitcode: 0
[2025-10-13 20:54:12] 2025-10-13 18:53:37,584 | INFO     | exeerrorcode: 0
[2025-10-13 20:54:12] 2025-10-13 18:53:37,584 | INFO     | exeerrordiag: 
[2025-10-13 20:54:12] 2025-10-13 18:53:37,584 | INFO     | exitcode: 0
[2025-10-13 20:54:12] 2025-10-13 18:53:37,584 | INFO     | exitmsg: OK
[2025-10-13 20:54:12] 2025-10-13 18:53:37,584 | INFO     | cpuconsumptiontime: 16618 s
[2025-10-13 20:54:12] 2025-10-13 18:53:37,584 | INFO     | nevents: 400
[2025-10-13 20:54:12] 2025-10-13 18:53:37,584 | INFO     | neventsw: 0
[2025-10-13 20:54:12] 2025-10-13 18:53:37,585 | INFO     | pid: 94573
[2025-10-13 20:54:12] 2025-10-13 18:53:37,585 | INFO     | pgrp: 94573
[2025-10-13 20:54:12] 2025-10-13 18:53:37,585 | INFO     | corecount: 4
[2025-10-13 20:54:12] 2025-10-13 18:53:37,585 | INFO     | event service: False
[2025-10-13 20:54:12] 2025-10-13 18:53:37,585 | INFO     | sizes: {0: 2348029, 1: 2348888, 4: 2349150, 11: 2349178, 4395: 2375396, 4397: 2384584, 4403: 2384722}
[2025-10-13 20:54:12] 2025-10-13 18:53:37,585 | INFO     | --------------------------------------------------
[2025-10-13 20:54:12] 2025-10-13 18:53:37,585 | INFO     | 
[2025-10-13 20:54:12] 2025-10-13 18:53:37,585 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-13 20:54:12] 2025-10-13 18:53:37,603 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 20:54:12] 2025-10-13 18:53:37,603 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 20:54:12] 2025-10-13 18:53:37,603 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 20:54:12] 2025-10-13 18:53:37,603 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 20:54:12] 2025-10-13 18:53:37,603 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 20:54:12] 2025-10-13 18:53:37,603 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 20:54:12] 2025-10-13 18:53:37,604 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 20:54:12] 2025-10-13 18:53:37,604 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 20:54:12] 2025-10-13 18:53:37,604 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 20:54:12] 2025-10-13 18:53:37,604 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 20:54:12] 2025-10-13 18:53:37,604 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 20:54:12] 2025-10-13 18:53:37,604 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 20:54:12] 2025-10-13 18:53:37,604 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 20:54:12] 2025-10-13 18:53:37,604 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 20:54:12] 2025-10-13 18:53:37,604 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 20:54:12] 2025-10-13 18:53:37,604 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 20:54:12] 2025-10-13 18:53:37,604 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 20:54:12] 2025-10-13 18:53:37,604 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 20:54:12] 2025-10-13 18:53:37,604 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 20:54:12] 2025-10-13 18:53:37,604 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 20:54:12] 2025-10-13 18:53:37,604 | INFO     | job 6841124546 has completed (purged errors)
[2025-10-13 20:54:12] 2025-10-13 18:53:37,604 | INFO     | overall cleanup function is called
[2025-10-13 20:54:12] 2025-10-13 18:53:38,611 | INFO     | --- collectZombieJob: --- 10, [94573]
[2025-10-13 20:54:12] 2025-10-13 18:53:38,611 | INFO     | zombie collector waiting for pid 94573
[2025-10-13 20:54:12] 2025-10-13 18:53:38,611 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 20:54:12] 2025-10-13 18:53:38,611 | INFO     | collected zombie processes
[2025-10-13 20:54:12] 2025-10-13 18:53:38,611 | INFO     | will attempt to kill all subprocesses of pid=94573
[2025-10-13 20:54:12] 2025-10-13 18:53:38,656 | INFO     | process IDs to be killed: [94573] (in reverse order)
[2025-10-13 20:54:12] 2025-10-13 18:53:38,690 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 20:54:12] 2025-10-13 18:53:38,690 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 20:54:12] 2025-10-13 18:53:38,692 | INFO     | did not find any defunct processes belonging to 94573
[2025-10-13 20:54:12] 2025-10-13 18:53:38,693 | INFO     | did not find any defunct processes belonging to 94573
[2025-10-13 20:54:12] 2025-10-13 18:53:38,694 | INFO     | ready for new job
[2025-10-13 20:54:12] 2025-10-13 18:53:38,694 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 20:54:12] 2025-10-13 18:53:38,694 | INFO     | ***************************************
[2025-10-13 20:54:12] 2025-10-13 18:53:38,694 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 20:54:12] 2025-10-13 18:53:38,694 | INFO     | ***************************************
[2025-10-13 20:54:12] 2025-10-13 18:53:38,694 | INFO     | 
[2025-10-13 20:54:12] 2025-10-13 18:53:38,695 | INFO     | architecture information:
[2025-10-13 20:54:12] 2025-10-13 18:53:38,695 | INFO     | executing command: cat /etc/os-release
[2025-10-13 20:54:12] 2025-10-13 18:53:38,710 | INFO     | cat /etc/os-release:
[2025-10-13 20:54:12] NAME="CentOS Linux"
[2025-10-13 20:54:12] VERSION="7 (Core)"
[2025-10-13 20:54:12] ID="centos"
[2025-10-13 20:54:12] ID_LIKE="rhel fedora"
[2025-10-13 20:54:12] VERSION_ID="7"
[2025-10-13 20:54:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 20:54:12] ANSI_COLOR="0;31"
[2025-10-13 20:54:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 20:54:12] HOME_URL="https://www.centos.org/"
[2025-10-13 20:54:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 20:54:12] 
[2025-10-13 20:54:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 20:54:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 20:54:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 20:54:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 20:54:12] 
[2025-10-13 20:54:12] 2025-10-13 18:53:38,710 | INFO     | ***************************************
[2025-10-13 20:54:12] 2025-10-13 18:53:39,213 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 20:54:12] 2025-10-13 18:53:39,232 | INFO     | sufficient remaining disk space (332606210048 B)
[2025-10-13 20:54:12] 2025-10-13 18:53:39,232 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 20:54:12] 2025-10-13 18:53:39,232 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 20:54:12] 2025-10-13 18:53:39,232 | INFO     | update_server=False
[2025-10-13 20:54:12] 2025-10-13 18:53:39,232 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 20:54:12] 2025-10-13 18:53:39,233 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 20:54:12] 2025-10-13 18:53:39,635 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 20:54:12] 2025-10-13 18:53:39,691 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 20:54:12] 2025-10-13 18:53:39,691 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 20:54:12] 2025-10-13 18:53:39,691 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 20:54:12] 2025-10-13 18:53:39,692 | INFO     | will abort loop
[2025-10-13 20:54:12] 2025-10-13 18:53:39,751 | INFO     | all data control threads have been joined
[2025-10-13 20:54:12] 2025-10-13 18:53:40,238 | INFO     | [job] queue monitor thread has finished
[2025-10-13 20:54:12] 2025-10-13 18:53:40,239 | INFO     | [job] retrieve thread has finished
[2025-10-13 20:54:12] 2025-10-13 18:53:40,338 | INFO     | all job control threads have been joined
[2025-10-13 20:54:12] 2025-10-13 18:53:40,427 | INFO     | all payload control threads have been joined
[2025-10-13 20:54:12] 2025-10-13 18:53:40,691 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 20:54:12] 2025-10-13 18:53:40,692 | INFO     | [job] job monitor thread has finished
[2025-10-13 20:54:12] 2025-10-13 18:53:40,742 | INFO     | [payload] validate_post thread has finished
[2025-10-13 20:54:12] 2025-10-13 18:53:40,756 | INFO     | [data] control thread has finished
[2025-10-13 20:54:12] 2025-10-13 18:53:40,787 | INFO     | [job] validate thread has finished
[2025-10-13 20:54:12] 2025-10-13 18:53:40,874 | INFO     | [payload] failed_post thread has finished
[2025-10-13 20:54:12] 2025-10-13 18:53:40,899 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 20:54:12] 2025-10-13 18:53:40,928 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 20:54:12] 2025-10-13 18:53:41,344 | INFO     | [job] control thread has finished
[2025-10-13 20:54:12] 2025-10-13 18:53:41,432 | INFO     | [payload] control thread has finished
[2025-10-13 20:54:12] 2025-10-13 18:53:41,546 | INFO     | [data] copytool_in thread has finished
[2025-10-13 20:54:12] 2025-10-13 18:53:41,596 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 20:54:12] 2025-10-13 18:53:41,641 | INFO     | [data] copytool_out thread has finished
[2025-10-13 20:54:12] 2025-10-13 18:53:42,173 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 20:54:12] 2025-10-13 18:53:46,180 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 20:54:12] 2025-10-13 18:54:05,716 | INFO     | [monitor] cgroup control has ended
[2025-10-13 20:54:12] 2025-10-13 18:54:06,890 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140493820274496)>', '<ExcThread(monitor, started 140492859758336)>']
[2025-10-13 20:54:12] 2025-10-13 18:54:09,136 | INFO     | PID=87980 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 20:54:12] 2025-10-13 18:54:09,136 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 20:54:12] 2025-10-13 18:54:09,136 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 20:54:12] 2025-10-13 18:54:09,136 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 20:54:12] 2025-10-13 18:54:09,136 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 20:54:12] 2025-10-13 18:54:09,136 | INFO     | [monitor] control thread has ended
[2025-10-13 20:54:12] 2025-10-13 18:54:11,915 | INFO     | all workflow threads have been joined
[2025-10-13 20:54:12] 2025-10-13 18:54:11,916 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 20:54:12] 2025-10-13 18:54:11,916 | INFO     | traces error code: 0
[2025-10-13 20:54:12] 2025-10-13 18:54:11,916 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 20:54:12] 2025-10-13 18:54:11,996 [wrapper] ==== pilot stdout END ====
[2025-10-13 20:54:12] 2025-10-13 18:54:12,001 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 20:54:12] 2025-10-13 18:54:12,005 [wrapper] pilotpid: 87980
[2025-10-13 20:54:12] 2025-10-13 18:54:12,009 [wrapper] Pilot exit status: 0
[2025-10-13 20:54:12] 2025-10-13 18:54:12,021 [wrapper] pandaids: 6841124546
[2025-10-13 20:54:12] 2025-10-13 18:54:12,043 [wrapper] cleanup supervisor_pilot  104474 87981
[2025-10-13 20:54:12] 2025-10-13 18:54:12,047 [wrapper] Test setup, not cleaning
[2025-10-13 20:54:12] 2025-10-13 18:54:12,051 [wrapper] apfmon messages muted
[2025-10-13 20:54:12] 2025-10-13 18:54:12,055 [wrapper] ==== wrapper stdout END ====
[2025-10-13 20:54:12] 2025-10-13 18:54:12,059 [wrapper] ==== wrapper stderr END ====
[2025-10-13 20:54:12]  *** Error codes and diagnostics ***
[2025-10-13 20:54:12]     "exeErrorCode": 0,
[2025-10-13 20:54:12]     "exeErrorDiag": "",
[2025-10-13 20:54:12]     "pilotErrorCode": 0,
[2025-10-13 20:54:12]     "pilotErrorDiag": "",
[2025-10-13 20:54:12]  *** Listing of results directory ***
[2025-10-13 20:54:12] total 411656
[2025-10-13 20:54:12] -rw-r--r-- 1 boinc boinc    557409 Oct 13 03:18 pilot3.tar.gz
[2025-10-13 20:54:12] -rw-r--r-- 1 boinc boinc      5112 Oct 13 03:54 queuedata.json
[2025-10-13 20:54:12] -rwx------ 1 boinc boinc     36292 Oct 13 03:56 runpilot2-wrapper.sh
[2025-10-13 20:54:12] -rw-r--r-- 1 boinc boinc       100 Oct 13 19:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 20:54:12] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 19:39 run_atlas
[2025-10-13 20:54:12] -rw-r--r-- 1 boinc boinc       105 Oct 13 19:39 job.xml
[2025-10-13 20:54:12] -rw-r--r-- 2 boinc boinc 222756406 Oct 13 19:39 EVNT.46676267._004369.pool.root.1
[2025-10-13 20:54:12] -rw-r--r-- 2 boinc boinc    569678 Oct 13 19:39 input.tar.gz
[2025-10-13 20:54:12] -rw-r--r-- 2 boinc boinc     15120 Oct 13 19:39 start_atlas.sh
[2025-10-13 20:54:12] drwxrwx--x 2 boinc boinc      4096 Oct 13 19:39 shared
[2025-10-13 20:54:12] -rw-r--r-- 1 boinc boinc         0 Oct 13 19:39 boinc_setup_complete
[2025-10-13 20:54:12] -rw-r--r-- 1 boinc boinc      6381 Oct 13 19:39 init_data.xml
[2025-10-13 20:54:12] -rw-r--r-- 1 boinc boinc         0 Oct 13 19:39 boinc_lockfile
[2025-10-13 20:54:12] -rw-r--r-- 1 boinc boinc      2550 Oct 13 19:39 pandaJob.out
[2025-10-13 20:54:12] -rw------- 1 boinc boinc    972791 Oct 13 19:39 agis_schedconf.cvmfs.json
[2025-10-13 20:54:12] -rw------- 1 boinc boinc   1560580 Oct 13 19:39 agis_ddmendpoints.agis.ALL.json
[2025-10-13 20:54:12] drwx------ 5 boinc boinc      4096 Oct 13 19:40 pilot3
[2025-10-13 20:54:12] -rw------- 1 boinc boinc 193071572 Oct 13 20:53 HITS.46676269._094413.pool.root.1
[2025-10-13 20:54:12] -rw-r--r-- 1 boinc boinc       530 Oct 13 20:53 boinc_task_state.xml
[2025-10-13 20:54:12] -rw------- 1 boinc boinc        95 Oct 13 20:53 pilot_heartbeat.json
[2025-10-13 20:54:12] -rw------- 1 boinc boinc      1015 Oct 13 20:53 memory_monitor_summary.json
[2025-10-13 20:54:12] -rw------- 1 boinc boinc    251261 Oct 13 20:53 log.46676269._094413.job.log.tgz.1
[2025-10-13 20:54:12] -rw------- 1 boinc boinc      7769 Oct 13 20:53 heartbeat.json
[2025-10-13 20:54:12] -rw-r--r-- 1 boinc boinc      8192 Oct 13 20:53 boinc_mmap_file
[2025-10-13 20:54:12] -rw-r--r-- 1 boinc boinc        27 Oct 13 20:53 wrapper_checkpoint.txt
[2025-10-13 20:54:12] -rw------- 1 boinc boinc      4936 Oct 13 20:54 pilotlog.txt
[2025-10-13 20:54:12] -rw------- 1 boinc boinc    652276 Oct 13 20:54 log.46676269._094413.job.log.1
[2025-10-13 20:54:12] -rw------- 1 boinc boinc       357 Oct 13 20:54 output.list
[2025-10-13 20:54:12] -rw-r--r-- 1 boinc boinc       620 Oct 13 20:54 runtime_log
[2025-10-13 20:54:12] -rw------- 1 boinc boinc    921600 Oct 13 20:54 result.tar.gz
[2025-10-13 20:54:12] -rw-r--r-- 1 boinc boinc      8797 Oct 13 20:54 runtime_log.err
[2025-10-13 20:54:12] -rw------- 1 boinc boinc       662 Oct 13 20:54 5CJMDmlyMS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm7PmNDmYbnOGn.diag
[2025-10-13 20:54:12] -rw-r--r-- 1 boinc boinc     21817 Oct 13 20:54 stderr.txt
[2025-10-13 20:54:12] HITS file was successfully produced:
[2025-10-13 20:54:12] -rw------- 1 boinc boinc 193071572 Oct 13 20:53 shared/HITS.pool.root.1
[2025-10-13 20:54:12]  *** Contents of shared directory: ***
[2025-10-13 20:54:12] total 407568
[2025-10-13 20:54:12] -rw-r--r-- 2 boinc boinc 222756406 Oct 13 19:39 ATLAS.root_0
[2025-10-13 20:54:12] -rw-r--r-- 2 boinc boinc    569678 Oct 13 19:39 input.tar.gz
[2025-10-13 20:54:12] -rw-r--r-- 2 boinc boinc     15120 Oct 13 19:39 start_atlas.sh
[2025-10-13 20:54:12] -rw------- 1 boinc boinc 193071572 Oct 13 20:53 HITS.pool.root.1
[2025-10-13 20:54:12] -rw------- 1 boinc boinc    921600 Oct 13 20:54 result.tar.gz
20:54:14 (84198): run_atlas exited; CPU time 16630.640058
20:54:14 (84198): called boinc_finish(0)

</stderr_txt>
]]>

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