Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:57:43 (12942): wrapper (7.7.26015): starting
04:57:43 (12942): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 04:57:43] Arguments: --nthreads 12
[2025-10-13 04:57:43] Threads: 12
[2025-10-13 04:57:43] Checking for CVMFS
[2025-10-13 04:57:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 04:57:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 04:57:43] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 04:57:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 04:57:43] 2.11.2.0 2991 224065 98964 151654 2 59 15577361 20275201 1 130560 1 110592487 99.984 13495817 12499 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 04:57:43] CVMFS is ok
[2025-10-13 04:57:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 04:57:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 04:57:43] Further information can be found at the LHC@home message board.
[2025-10-13 04:57:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 04:57:43] Checking for apptainer binary...
[2025-10-13 04:57:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 04:57:43] Running /usr/bin/apptainer --version
[2025-10-13 04:57:43] apptainer version 1.3.2-1.el7
[2025-10-13 04:57:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 04:57:44] c-205-32.aglt2.org
[2025-10-13 04:57:44] apptainer works
[2025-10-13 04:57:44] Set ATHENA_PROC_NUMBER=12
[2025-10-13 04:57:44] Set ATHENA_CORE_NUMBER=12
[2025-10-13 04:57:44] Starting ATLAS job with PandaID=6840969814
[2025-10-13 04:57:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 06:13:11]  *** The last 200 lines of the pilot log: ***
[2025-10-13 06:13:11]  replicas=None
[2025-10-13 06:13:11]  scope=mc23_13p6TeV
[2025-10-13 06:13:11]  status=None
[2025-10-13 06:13:11]  status_code=0
[2025-10-13 06:13:11]  storage_token=
[2025-10-13 06:13:11]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6840969814/log.46676269._092498.job.log.tgz.1
[2025-10-13 06:13:11]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/20/5b/log.46676269._092498.job.log.tgz.1
[2025-10-13 06:13:11]  workdir=None
[2025-10-13 06:13:11] ]
[2025-10-13 06:13:11] 2025-10-13 10:12:25,233 | INFO     | transferring file log.46676269._092498.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6840969814/log.46676269._092498.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-13 06:13:11] 2025-10-13 10:12:25,233 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6840969814/log.46676269._092498.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._092498.job
[2025-10-13 06:13:11] 2025-10-13 10:12:25,256 | INFO     | adding to output.list: log.46676269._092498.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/20/5b/log.46676269._092498.job.log.tg
[2025-10-13 06:13:11] 2025-10-13 10:12:25,257 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 06:13:11] 2025-10-13 10:12:25,257 | INFO     | summary of transferred files:
[2025-10-13 06:13:11] 2025-10-13 10:12:25,257 | INFO     |  -- lfn=log.46676269._092498.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 06:13:11] 2025-10-13 10:12:25,257 | INFO     | stage-out finished correctly
[2025-10-13 06:13:11] 2025-10-13 10:12:25,876 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 06:13:11] 2025-10-13 10:12:25,955 | INFO     | job 6840969814 has state=finished
[2025-10-13 06:13:11] 2025-10-13 10:12:25,955 | INFO     | preparing for final server update for job 6840969814 in state='finished'
[2025-10-13 06:13:11] 2025-10-13 10:12:26,014 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-10-13 06:13:11] 2025-10-13 10:12:26,015 | INFO     | this job has now completed (state=finished)
[2025-10-13 06:13:11] 2025-10-13 10:12:26,015 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 06:13:11] 2025-10-13 10:12:26,015 | INFO     | log transfer has been attempted: DONE
[2025-10-13 06:13:11] 2025-10-13 10:12:26,015 | INFO     | job 6840969814 has finished - writing final server update
[2025-10-13 06:13:11] 2025-10-13 10:12:26,016 | INFO     | total number of processed events: 400 (read)
[2025-10-13 06:13:11] 2025-10-13 10:12:26,016 | INFO     | executing command: lscpu
[2025-10-13 06:13:11] 2025-10-13 10:12:26,037 | INFO     | time since job start (4467s) is within the limit (172800.0s)
[2025-10-13 06:13:11] 2025-10-13 10:12:26,042 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 06:13:11] 2025-10-13 10:12:26,668 | INFO     | monitor loop #333: job 0:6840969814 is in state 'finished'
[2025-10-13 06:13:11] 2025-10-13 10:12:26,669 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 06:13:11] 2025-10-13 10:12:28,042 | INFO     | time since job start (4469s) is within the limit (172800.0s)
[2025-10-13 06:13:11] 2025-10-13 10:12:29,171 | INFO     | monitor loop #334: job 0:6840969814 is in state 'finished'
[2025-10-13 06:13:11] 2025-10-13 10:12:29,171 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 06:13:11] 2025-10-13 10:12:30,047 | INFO     | time since job start (4471s) is within the limit (172800.0s)
[2025-10-13 06:13:11] 2025-10-13 10:12:31,674 | INFO     | monitor loop #335: job 0:6840969814 is in state 'finished'
[2025-10-13 06:13:11] 2025-10-13 10:12:31,674 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 06:13:11] 2025-10-13 10:12:31,778 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-13 06:13:11] 2025-10-13 10:12:31,782 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1740.1666666666667
[2025-10-13 06:13:11] 2025-10-13 10:12:31,785 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840969814/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 06:13:11] 2025-10-13 10:12:31,786 | INFO     | extracted standard info from prmon json
[2025-10-13 06:13:11] 2025-10-13 10:12:31,786 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 06:13:11] 2025-10-13 10:12:31,786 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 06:13:11] 2025-10-13 10:12:31,787 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 06:13:11] 2025-10-13 10:12:31,787 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 06:13:11] 2025-10-13 10:12:31,789 | INFO     | fitting pss+swap vs Time
[2025-10-13 06:13:11] 2025-10-13 10:12:31,789 | INFO     | sum of square deviations: 89127252.5
[2025-10-13 06:13:11] 2025-10-13 10:12:31,789 | INFO     | sum of deviations: -3523893170.5
[2025-10-13 06:13:11] 2025-10-13 10:12:31,789 | INFO     | mean x: 1760348194.5
[2025-10-13 06:13:11] 2025-10-13 10:12:31,789 | INFO     | mean y: 2713499.257575758
[2025-10-13 06:13:11] 2025-10-13 10:12:31,790 | INFO     | -- intersect: 69602962652.01312
[2025-10-13 06:13:11] 2025-10-13 10:12:31,790 | INFO     | intersect: 69602962652.01312
[2025-10-13 06:13:11] 2025-10-13 10:12:31,790 | INFO     | chi2: 0.06931288397715925
[2025-10-13 06:13:11] 2025-10-13 10:12:31,790 | INFO     | -- intersect: 69602962652.01312
[2025-10-13 06:13:11] 2025-10-13 10:12:31,790 | INFO     | current memory leak: -39.54 B/s (using 66 data points, chi2=0.07)
[2025-10-13 06:13:11] 2025-10-13 10:12:31,790 | INFO     | could have reported an average CPU frequency of 2045 MHz (6 samples)
[2025-10-13 06:13:11] 2025-10-13 10:12:31,791 | INFO     | ..............................
[2025-10-13 06:13:11] 2025-10-13 10:12:31,791 | INFO     | . Timing measurements:
[2025-10-13 06:13:11] 2025-10-13 10:12:31,791 | INFO     | . get job = 0 s
[2025-10-13 06:13:11] 2025-10-13 10:12:31,791 | INFO     | . initial setup = 2 s
[2025-10-13 06:13:11] 2025-10-13 10:12:31,791 | INFO     | . payload setup = 6 s
[2025-10-13 06:13:11] 2025-10-13 10:12:31,791 | INFO     | . stage-in = 0 s
[2025-10-13 06:13:11] 2025-10-13 10:12:31,791 | INFO     | . payload execution = 4439 s
[2025-10-13 06:13:11] 2025-10-13 10:12:31,791 | INFO     | . stage-out = 0 s
[2025-10-13 06:13:11] 2025-10-13 10:12:31,791 | INFO     | . log creation = 0 s
[2025-10-13 06:13:11] 2025-10-13 10:12:31,791 | INFO     | ..............................
[2025-10-13 06:13:11] 2025-10-13 10:12:31,873 | INFO     | 
[2025-10-13 06:13:11] 2025-10-13 10:12:31,873 | INFO     | job summary report
[2025-10-13 06:13:11] 2025-10-13 10:12:31,873 | INFO     | --------------------------------------------------
[2025-10-13 06:13:11] 2025-10-13 10:12:31,873 | INFO     | PanDA job id: 6840969814
[2025-10-13 06:13:11] 2025-10-13 10:12:31,873 | INFO     | task id: 46676269
[2025-10-13 06:13:11] 2025-10-13 10:12:31,874 | INFO     | errors: (none)
[2025-10-13 06:13:11] 2025-10-13 10:12:31,874 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 06:13:11] 2025-10-13 10:12:31,874 | INFO     | pilot state: finished 
[2025-10-13 06:13:11] 2025-10-13 10:12:31,874 | INFO     | transexitcode: 0
[2025-10-13 06:13:11] 2025-10-13 10:12:31,874 | INFO     | exeerrorcode: 0
[2025-10-13 06:13:11] 2025-10-13 10:12:31,874 | INFO     | exeerrordiag: 
[2025-10-13 06:13:11] 2025-10-13 10:12:31,875 | INFO     | exitcode: 0
[2025-10-13 06:13:11] 2025-10-13 10:12:31,875 | INFO     | exitmsg: OK
[2025-10-13 06:13:11] 2025-10-13 10:12:31,875 | INFO     | cpuconsumptiontime: 45688 s
[2025-10-13 06:13:11] 2025-10-13 10:12:31,875 | INFO     | nevents: 400
[2025-10-13 06:13:11] 2025-10-13 10:12:31,875 | INFO     | neventsw: 0
[2025-10-13 06:13:11] 2025-10-13 10:12:31,875 | INFO     | pid: 23929
[2025-10-13 06:13:11] 2025-10-13 10:12:31,875 | INFO     | pgrp: 23929
[2025-10-13 06:13:11] 2025-10-13 10:12:31,876 | INFO     | corecount: 12
[2025-10-13 06:13:11] 2025-10-13 10:12:31,876 | INFO     | event service: False
[2025-10-13 06:13:11] 2025-10-13 10:12:31,876 | INFO     | sizes: {0: 2348856, 5: 2349118, 11: 2349174, 4450: 2384277, 4451: 2384277, 4457: 2384471}
[2025-10-13 06:13:11] 2025-10-13 10:12:31,876 | INFO     | --------------------------------------------------
[2025-10-13 06:13:11] 2025-10-13 10:12:31,876 | INFO     | 
[2025-10-13 06:13:11] 2025-10-13 10:12:31,876 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 06:13:11] 2025-10-13 10:12:31,899 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 06:13:11] 2025-10-13 10:12:31,900 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 06:13:11] 2025-10-13 10:12:31,900 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 06:13:11] 2025-10-13 10:12:31,900 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 06:13:11] 2025-10-13 10:12:31,900 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 06:13:11] 2025-10-13 10:12:31,900 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 06:13:11] 2025-10-13 10:12:31,901 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 06:13:11] 2025-10-13 10:12:31,901 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 06:13:11] 2025-10-13 10:12:31,901 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 06:13:11] 2025-10-13 10:12:31,901 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 06:13:11] 2025-10-13 10:12:31,901 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 06:13:11] 2025-10-13 10:12:31,901 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 06:13:11] 2025-10-13 10:12:31,902 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 06:13:11] 2025-10-13 10:12:31,902 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 06:13:11] 2025-10-13 10:12:31,902 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 06:13:11] 2025-10-13 10:12:31,902 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 06:13:11] 2025-10-13 10:12:31,902 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 06:13:11] 2025-10-13 10:12:31,902 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 06:13:11] 2025-10-13 10:12:31,903 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 06:13:11] 2025-10-13 10:12:31,903 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 06:13:11] 2025-10-13 10:12:31,903 | INFO     | job 6840969814 has completed (purged errors)
[2025-10-13 06:13:11] 2025-10-13 10:12:31,903 | INFO     | overall cleanup function is called
[2025-10-13 06:13:11] 2025-10-13 10:12:32,911 | INFO     | --- collectZombieJob: --- 10, [23929]
[2025-10-13 06:13:11] 2025-10-13 10:12:32,912 | INFO     | zombie collector waiting for pid 23929
[2025-10-13 06:13:11] 2025-10-13 10:12:32,912 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 06:13:11] 2025-10-13 10:12:32,912 | INFO     | collected zombie processes
[2025-10-13 06:13:11] 2025-10-13 10:12:32,912 | INFO     | will attempt to kill all subprocesses of pid=23929
[2025-10-13 06:13:11] 2025-10-13 10:12:33,003 | INFO     | process IDs to be killed: [23929] (in reverse order)
[2025-10-13 06:13:11] 2025-10-13 10:12:33,052 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 06:13:11] 2025-10-13 10:12:33,053 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 06:13:11] 2025-10-13 10:12:33,056 | INFO     | did not find any defunct processes belonging to 23929
[2025-10-13 06:13:11] 2025-10-13 10:12:33,059 | INFO     | did not find any defunct processes belonging to 23929
[2025-10-13 06:13:11] 2025-10-13 10:12:33,059 | INFO     | ready for new job
[2025-10-13 06:13:11] 2025-10-13 10:12:33,059 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 06:13:11] 2025-10-13 10:12:33,060 | INFO     | ***************************************
[2025-10-13 06:13:11] 2025-10-13 10:12:33,061 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 06:13:11] 2025-10-13 10:12:33,061 | INFO     | ***************************************
[2025-10-13 06:13:11] 2025-10-13 10:12:33,061 | INFO     | 
[2025-10-13 06:13:11] 2025-10-13 10:12:33,061 | INFO     | architecture information:
[2025-10-13 06:13:11] 2025-10-13 10:12:33,062 | INFO     | executing command: cat /etc/os-release
[2025-10-13 06:13:11] 2025-10-13 10:12:33,076 | INFO     | cat /etc/os-release:
[2025-10-13 06:13:11] NAME="CentOS Linux"
[2025-10-13 06:13:11] VERSION="7 (Core)"
[2025-10-13 06:13:11] ID="centos"
[2025-10-13 06:13:11] ID_LIKE="rhel fedora"
[2025-10-13 06:13:11] VERSION_ID="7"
[2025-10-13 06:13:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 06:13:11] ANSI_COLOR="0;31"
[2025-10-13 06:13:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 06:13:11] HOME_URL="https://www.centos.org/"
[2025-10-13 06:13:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 06:13:11] 
[2025-10-13 06:13:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 06:13:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 06:13:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 06:13:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 06:13:11] 
[2025-10-13 06:13:11] 2025-10-13 10:12:33,076 | INFO     | ***************************************
[2025-10-13 06:13:11] 2025-10-13 10:12:33,579 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 06:13:11] 2025-10-13 10:12:33,595 | INFO     | sufficient remaining disk space (29363273728 B)
[2025-10-13 06:13:11] 2025-10-13 10:12:33,595 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 06:13:11] 2025-10-13 10:12:33,596 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 06:13:11] 2025-10-13 10:12:33,596 | INFO     | update_server=False
[2025-10-13 06:13:11] 2025-10-13 10:12:33,596 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 06:13:11] 2025-10-13 10:12:33,596 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:13:11] 2025-10-13 10:12:33,596 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:13:11] 2025-10-13 10:12:33,597 | INFO     | aborting loop
[2025-10-13 06:13:11] 2025-10-13 10:12:33,597 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 06:13:11] 2025-10-13 10:12:33,847 | INFO     | all job control threads have been joined
[2025-10-13 06:13:11] 2025-10-13 10:12:34,420 | INFO     | all data control threads have been joined
[2025-10-13 06:13:11] 2025-10-13 10:12:34,601 | INFO     | [job] retrieve thread has finished
[2025-10-13 06:13:11] 2025-10-13 10:12:34,602 | INFO     | [job] queue monitor thread has finished
[2025-10-13 06:13:11] 2025-10-13 10:12:34,602 | INFO     | [job] job monitor thread has finished
[2025-10-13 06:13:11] 2025-10-13 10:12:34,731 | INFO     | all payload control threads have been joined
[2025-10-13 06:13:11] 2025-10-13 10:12:34,852 | INFO     | [job] control thread has finished
[2025-10-13 06:13:11] 2025-10-13 10:12:34,996 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 06:13:11] 2025-10-13 10:12:35,085 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 06:13:11] 2025-10-13 10:12:35,095 | INFO     | [job] validate thread has finished
[2025-10-13 06:13:11] 2025-10-13 10:12:35,117 | INFO     | [payload] validate_post thread has finished
[2025-10-13 06:13:11] 2025-10-13 10:12:35,271 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 06:13:11] 2025-10-13 10:12:35,426 | INFO     | [data] control thread has finished
[2025-10-13 06:13:11] 2025-10-13 10:12:35,517 | INFO     | [data] copytool_in thread has finished
[2025-10-13 06:13:11] 2025-10-13 10:12:35,603 | INFO     | [data] copytool_out thread has finished
[2025-10-13 06:13:11] 2025-10-13 10:12:35,697 | INFO     | [payload] failed_post thread has finished
[2025-10-13 06:13:11] 2025-10-13 10:12:35,734 | INFO     | [payload] control thread has finished
[2025-10-13 06:13:11] 2025-10-13 10:12:35,939 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 06:13:11] 2025-10-13 10:12:36,462 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 06:13:11] 2025-10-13 10:12:40,468 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 06:13:11] 2025-10-13 10:12:56,833 [wrapper] supervise_pilot (15 min periods counter: 6)
[2025-10-13 06:13:11] 2025-10-13 10:13:03,255 | INFO     | PID=16619 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 06:13:11] 2025-10-13 10:13:03,256 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 06:13:11] 2025-10-13 10:13:03,256 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 06:13:11] 2025-10-13 10:13:03,256 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 06:13:11] 2025-10-13 10:13:05,708 | INFO     | [monitor] cgroup control has ended
[2025-10-13 06:13:11] 2025-10-13 10:13:06,073 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140651695634240)>', '<ExcThread(monitor, started 140651468293888)>']
[2025-10-13 06:13:11] 2025-10-13 10:13:06,271 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 06:13:11] 2025-10-13 10:13:06,272 | INFO     | [monitor] control thread has ended
[2025-10-13 06:13:11] 2025-10-13 10:13:11,075 | INFO     | all workflow threads have been joined
[2025-10-13 06:13:11] 2025-10-13 10:13:11,075 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 06:13:11] 2025-10-13 10:13:11,075 | INFO     | traces error code: 0
[2025-10-13 06:13:11] 2025-10-13 10:13:11,076 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 06:13:11] 2025-10-13 10:13:11,165 [wrapper] ==== pilot stdout END ====
[2025-10-13 06:13:11] 2025-10-13 10:13:11,169 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 06:13:11] 2025-10-13 10:13:11,172 [wrapper] pilotpid: 16619
[2025-10-13 06:13:11] 2025-10-13 10:13:11,176 [wrapper] Pilot exit status: 0
[2025-10-13 06:13:11] 2025-10-13 10:13:11,190 [wrapper] pandaids: 6840969814
[2025-10-13 06:13:11] 2025-10-13 10:13:11,230 [wrapper] cleanup supervisor_pilot 20532 16620
[2025-10-13 06:13:11] 2025-10-13 10:13:11,234 [wrapper] Test setup, not cleaning
[2025-10-13 06:13:11] 2025-10-13 10:13:11,238 [wrapper] apfmon messages muted
[2025-10-13 06:13:11] 2025-10-13 10:13:11,241 [wrapper] ==== wrapper stdout END ====
[2025-10-13 06:13:11] 2025-10-13 10:13:11,245 [wrapper] ==== wrapper stderr END ====
[2025-10-13 06:13:11]  *** Error codes and diagnostics ***
[2025-10-13 06:13:11]     "exeErrorCode": 0,
[2025-10-13 06:13:11]     "exeErrorDiag": "",
[2025-10-13 06:13:11]     "pilotErrorCode": 0,
[2025-10-13 06:13:11]     "pilotErrorDiag": "",
[2025-10-13 06:13:11]  *** Listing of results directory ***
[2025-10-13 06:13:11] total 410852
[2025-10-13 06:13:11] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 19:11 pilot3.tar.gz
[2025-10-13 06:13:11] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 19:50 queuedata.json
[2025-10-13 06:13:11] -rwx------ 1 boincer umatlas     36292 Oct 12 19:51 runpilot2-wrapper.sh
[2025-10-13 06:13:11] -rw-r--r-- 1 boincer umatlas       100 Oct 13 04:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 06:13:11] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 04:57 run_atlas
[2025-10-13 06:13:11] -rw-r--r-- 1 boincer umatlas       105 Oct 13 04:57 job.xml
[2025-10-13 06:13:11] -rw-r--r-- 2 boincer umatlas 223538270 Oct 13 04:57 EVNT.46676267._004669.pool.root.1
[2025-10-13 06:13:11] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 04:57 start_atlas.sh
[2025-10-13 06:13:11] drwxrwx--x 2 boincer umatlas      4096 Oct 13 04:57 shared
[2025-10-13 06:13:11] -rw-r--r-- 2 boincer umatlas    569684 Oct 13 04:57 input.tar.gz
[2025-10-13 06:13:11] -rw-r--r-- 1 boincer umatlas         0 Oct 13 04:57 boinc_lockfile
[2025-10-13 06:13:11] -rw-r--r-- 1 boincer umatlas      2549 Oct 13 04:57 pandaJob.out
[2025-10-13 06:13:11] -rw------- 1 boincer umatlas    972857 Oct 13 04:57 agis_schedconf.cvmfs.json
[2025-10-13 06:13:11] -rw------- 1 boincer umatlas   1560580 Oct 13 04:57 agis_ddmendpoints.agis.ALL.json
[2025-10-13 06:13:11] drwx------ 5 boincer umatlas      4096 Oct 13 04:57 pilot3
[2025-10-13 06:13:11] -rw-r--r-- 1 boincer umatlas      5953 Oct 13 06:10 init_data.xml
[2025-10-13 06:13:11] -rw------- 1 boincer umatlas 191229940 Oct 13 06:11 HITS.46676269._092498.pool.root.1
[2025-10-13 06:13:11] -rw------- 1 boincer umatlas      1048 Oct 13 06:12 memory_monitor_summary.json
[2025-10-13 06:13:11] -rw-r--r-- 1 boincer umatlas       530 Oct 13 06:12 boinc_task_state.xml
[2025-10-13 06:13:11] -rw------- 1 boincer umatlas    374925 Oct 13 06:12 log.46676269._092498.job.log.tgz.1
[2025-10-13 06:13:11] -rw------- 1 boincer umatlas      7851 Oct 13 06:12 heartbeat.json
[2025-10-13 06:13:11] -rw-r--r-- 1 boincer umatlas        27 Oct 13 06:12 wrapper_checkpoint.txt
[2025-10-13 06:13:11] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 06:12 boinc_mmap_file
[2025-10-13 06:13:11] -rw------- 1 boincer umatlas        95 Oct 13 06:13 pilot_heartbeat.json
[2025-10-13 06:13:11] -rw------- 1 boincer umatlas      4746 Oct 13 06:13 pilotlog.txt
[2025-10-13 06:13:11] -rw------- 1 boincer umatlas    649290 Oct 13 06:13 log.46676269._092498.job.log.1
[2025-10-13 06:13:11] -rw------- 1 boincer umatlas       357 Oct 13 06:13 output.list
[2025-10-13 06:13:11] -rw-r--r-- 1 boincer umatlas       620 Oct 13 06:13 runtime_log
[2025-10-13 06:13:11] -rw------- 1 boincer umatlas   1044480 Oct 13 06:13 result.tar.gz
[2025-10-13 06:13:11] -rw-r--r-- 1 boincer umatlas      8705 Oct 13 06:13 runtime_log.err
[2025-10-13 06:13:11] -rw------- 1 boincer umatlas       659 Oct 13 06:13 qJDNDmr1KS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmUJVMDmurYWin.diag
[2025-10-13 06:13:11] -rw-r--r-- 1 boincer umatlas     21805 Oct 13 06:13 stderr.txt
[2025-10-13 06:13:11] HITS file was successfully produced:
[2025-10-13 06:13:11] -rw------- 1 boincer umatlas 191229940 Oct 13 06:11 shared/HITS.pool.root.1
[2025-10-13 06:13:11]  *** Contents of shared directory: ***
[2025-10-13 06:13:11] total 406648
[2025-10-13 06:13:11] -rw-r--r-- 2 boincer umatlas 223538270 Oct 13 04:57 ATLAS.root_0
[2025-10-13 06:13:11] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 04:57 start_atlas.sh
[2025-10-13 06:13:11] -rw-r--r-- 2 boincer umatlas    569684 Oct 13 04:57 input.tar.gz
[2025-10-13 06:13:11] -rw------- 1 boincer umatlas 191229940 Oct 13 06:11 HITS.pool.root.1
[2025-10-13 06:13:11] -rw------- 1 boincer umatlas   1044480 Oct 13 06:13 result.tar.gz
06:13:12 (12942): run_atlas exited; CPU time 45660.554063
06:13:12 (12942): called boinc_finish(0)

</stderr_txt>
]]>

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