Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:30:12 (1076646): wrapper (7.7.26015): starting
05:30:12 (1076646): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 05:30:12] Arguments: --nthreads 8
[2025-10-13 05:30:12] Threads: 8
[2025-10-13 05:30:12] Checking for CVMFS
[2025-10-13 05:30:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 05:30:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 05:30:13] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 05:30:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 05:30:14] 2.13.2.0 3290912 6664 145492 151656 1 65 24120331 40960000 14987 16776704 0 14442234 99.734 8890188 31789 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 05:30:14] CVMFS is ok
[2025-10-13 05:30:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 05:30:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 05:30:14] Further information can be found at the LHC@home message board.
[2025-10-13 05:30:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 05:30:14] Checking for apptainer binary...
[2025-10-13 05:30:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 05:30:14] Running /usr/bin/apptainer --version
[2025-10-13 05:30:15] apptainer version 1.4.3-1.el9
[2025-10-13 05:30:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 05:30:15] c-210-31-3.aglt2.org
[2025-10-13 05:30:15] apptainer works
[2025-10-13 05:30:15] Set ATHENA_PROC_NUMBER=8
[2025-10-13 05:30:15] Set ATHENA_CORE_NUMBER=8
[2025-10-13 05:30:15] Starting ATLAS job with PandaID=6840969855
[2025-10-13 05:30:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 07:38:58]  *** The last 200 lines of the pilot log: ***
[2025-10-13 07:38:58] 2025-10-13 11:38:24,810 | INFO     | PID=1082498 has CPU usage=11.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-13 07:38:58] 2025-10-13 11:38:24,810 | INFO     | .. there are 14 such processes running
[2025-10-13 07:38:58] 2025-10-13 11:38:24,910 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-13 07:38:58] 2025-10-13 11:38:24,914 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2666.581946428571
[2025-10-13 07:38:58] 2025-10-13 11:38:24,923 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6840969855/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 07:38:58] 2025-10-13 11:38:24,924 | INFO     | extracted standard info from prmon json
[2025-10-13 07:38:58] 2025-10-13 11:38:24,924 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 07:38:58] 2025-10-13 11:38:24,924 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 07:38:58] 2025-10-13 11:38:24,925 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 07:38:58] 2025-10-13 11:38:24,925 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 07:38:58] 2025-10-13 11:38:24,927 | INFO     | fitting pss+swap vs Time
[2025-10-13 07:38:58] 2025-10-13 11:38:24,927 | INFO     | sum of square deviations: 576878511.4796736
[2025-10-13 07:38:58] 2025-10-13 11:38:24,928 | INFO     | sum of deviations: 11671807966.19512
[2025-10-13 07:38:58] 2025-10-13 11:38:24,928 | INFO     | mean x: 1760351727.398374
[2025-10-13 07:38:58] 2025-10-13 11:38:24,928 | INFO     | mean y: 2514146.975609756
[2025-10-13 07:38:58] 2025-10-13 11:38:24,928 | INFO     | -- intersect: -35614148471.38513
[2025-10-13 07:38:58] 2025-10-13 11:38:24,928 | INFO     | intersect: -35614148471.38513
[2025-10-13 07:38:58] 2025-10-13 11:38:24,928 | INFO     | chi2: 2.0224588946746804
[2025-10-13 07:38:58] 2025-10-13 11:38:24,929 | INFO     | sum of square deviations: 509348003.1525423
[2025-10-13 07:38:58] 2025-10-13 11:38:24,929 | INFO     | sum of deviations: 11436733859.084747
[2025-10-13 07:38:58] 2025-10-13 11:38:24,929 | INFO     | mean x: 1760351574.9152544
[2025-10-13 07:38:58] 2025-10-13 11:38:24,930 | INFO     | mean y: 2513616.5084745763
[2025-10-13 07:38:58] 2025-10-13 11:38:24,930 | INFO     | -- intersect: -39523846231.99967
[2025-10-13 07:38:58] 2025-10-13 11:38:24,930 | INFO     | intersect: -39523846231.99967
[2025-10-13 07:38:58] 2025-10-13 11:38:24,931 | INFO     | chi2: 2.026756638462288
[2025-10-13 07:38:58] 2025-10-13 11:38:24,931 | INFO     | current chi2=2.026756638462288 (change=-0.21250092147356245 %)
[2025-10-13 07:38:58] 2025-10-13 11:38:24,931 | INFO     | right removable region: 117
[2025-10-13 07:38:58] 2025-10-13 11:38:24,931 | INFO     | sum of square deviations: 509318113.1525423
[2025-10-13 07:38:58] 2025-10-13 11:38:24,931 | INFO     | sum of deviations: -11983927996.593218
[2025-10-13 07:38:58] 2025-10-13 11:38:24,932 | INFO     | mean x: 1760351879.9152544
[2025-10-13 07:38:58] 2025-10-13 11:38:24,932 | INFO     | mean y: 2566770.940677966
[2025-10-13 07:38:58] 2025-10-13 11:38:24,932 | INFO     | -- intersect: 41422515586.41433
[2025-10-13 07:38:58] 2025-10-13 11:38:24,932 | INFO     | intersect: 41422515586.41433
[2025-10-13 07:38:58] 2025-10-13 11:38:24,932 | INFO     | chi2: 0.06964421842586659
[2025-10-13 07:38:58] 2025-10-13 11:38:24,932 | INFO     | current chi2=0.06964421842586659 (change=96.5564581505589 %)
[2025-10-13 07:38:58] 2025-10-13 11:38:24,932 | INFO     | sum of square deviations: 447260219.4513276
[2025-10-13 07:38:58] 2025-10-13 11:38:24,933 | INFO     | sum of deviations: -11679898946.0177
[2025-10-13 07:38:58] 2025-10-13 11:38:24,933 | INFO     | mean x: 1760352032.4159293
[2025-10-13 07:38:58] 2025-10-13 11:38:24,933 | INFO     | mean y: 2565923.7876106193
[2025-10-13 07:38:58] 2025-10-13 11:38:24,933 | INFO     | -- intersect: 45972971861.64996
[2025-10-13 07:38:58] 2025-10-13 11:38:24,933 | INFO     | intersect: 45972971861.64996
[2025-10-13 07:38:58] 2025-10-13 11:38:24,933 | INFO     | chi2: 0.056257198553558894
[2025-10-13 07:38:58] 2025-10-13 11:38:24,933 | INFO     | current chi2=0.056257198553558894 (change=19.2220117834442 %)
[2025-10-13 07:38:58] 2025-10-13 11:38:24,933 | INFO     | left removable region: 20
[2025-10-13 07:38:58] 2025-10-13 11:38:24,934 | INFO     | sum of square deviations: 282877653.3195885
[2025-10-13 07:38:58] 2025-10-13 11:38:24,934 | INFO     | sum of deviations: -6679643901.030929
[2025-10-13 07:38:58] 2025-10-13 11:38:24,934 | INFO     | mean x: 1760352154.402062
[2025-10-13 07:38:58] 2025-10-13 11:38:24,934 | INFO     | mean y: 2554813.154639175
[2025-10-13 07:38:58] 2025-10-13 11:38:24,934 | INFO     | -- intersect: 41570085488.806435
[2025-10-13 07:38:58] 2025-10-13 11:38:24,934 | INFO     | intersect: 41570085488.806435
[2025-10-13 07:38:58] 2025-10-13 11:38:24,935 | INFO     | chi2: 0.049256467236088584
[2025-10-13 07:38:58] 2025-10-13 11:38:24,935 | INFO     | -- intersect: 41570085488.806435
[2025-10-13 07:38:58] 2025-10-13 11:38:24,935 | INFO     | current memory leak: -23.61 B/s (using 97 data points, chi2=0.05)
[2025-10-13 07:38:58] 2025-10-13 11:38:24,935 | INFO     | could have reported an average CPU frequency of 2644 MHz (8 samples)
[2025-10-13 07:38:58] 2025-10-13 11:38:24,935 | INFO     | ..............................
[2025-10-13 07:38:58] 2025-10-13 11:38:24,935 | INFO     | . Timing measurements:
[2025-10-13 07:38:58] 2025-10-13 11:38:24,935 | INFO     | . get job = 0 s
[2025-10-13 07:38:58] 2025-10-13 11:38:24,936 | INFO     | . initial setup = 4 s
[2025-10-13 07:38:58] 2025-10-13 11:38:24,936 | INFO     | . payload setup = 40 s
[2025-10-13 07:38:58] 2025-10-13 11:38:24,936 | INFO     | . stage-in = 0 s
[2025-10-13 07:38:58] 2025-10-13 11:38:24,936 | INFO     | . payload execution = 7514 s
[2025-10-13 07:38:58] 2025-10-13 11:38:24,936 | INFO     | . stage-out = 0 s
[2025-10-13 07:38:58] 2025-10-13 11:38:24,936 | INFO     | . log creation = 0 s
[2025-10-13 07:38:58] 2025-10-13 11:38:24,936 | INFO     | ..............................
[2025-10-13 07:38:58] 2025-10-13 11:38:25,024 | INFO     | 
[2025-10-13 07:38:58] 2025-10-13 11:38:25,024 | INFO     | job summary report
[2025-10-13 07:38:58] 2025-10-13 11:38:25,024 | INFO     | --------------------------------------------------
[2025-10-13 07:38:58] 2025-10-13 11:38:25,024 | INFO     | PanDA job id: 6840969855
[2025-10-13 07:38:58] 2025-10-13 11:38:25,024 | INFO     | task id: 46676269
[2025-10-13 07:38:58] 2025-10-13 11:38:25,024 | INFO     | errors: (none)
[2025-10-13 07:38:58] 2025-10-13 11:38:25,024 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 07:38:58] 2025-10-13 11:38:25,024 | INFO     | pilot state: finished 
[2025-10-13 07:38:58] 2025-10-13 11:38:25,024 | INFO     | transexitcode: 0
[2025-10-13 07:38:58] 2025-10-13 11:38:25,025 | INFO     | exeerrorcode: 0
[2025-10-13 07:38:58] 2025-10-13 11:38:25,025 | INFO     | exeerrordiag: 
[2025-10-13 07:38:58] 2025-10-13 11:38:25,025 | INFO     | exitcode: 0
[2025-10-13 07:38:58] 2025-10-13 11:38:25,025 | INFO     | exitmsg: OK
[2025-10-13 07:38:58] 2025-10-13 11:38:25,025 | INFO     | cpuconsumptiontime: 40017 s
[2025-10-13 07:38:58] 2025-10-13 11:38:25,025 | INFO     | nevents: 400
[2025-10-13 07:38:58] 2025-10-13 11:38:25,025 | INFO     | neventsw: 0
[2025-10-13 07:38:58] 2025-10-13 11:38:25,025 | INFO     | pid: 1094226
[2025-10-13 07:38:58] 2025-10-13 11:38:25,025 | INFO     | pgrp: 1094226
[2025-10-13 07:38:58] 2025-10-13 11:38:25,025 | INFO     | corecount: 8
[2025-10-13 07:38:58] 2025-10-13 11:38:25,025 | INFO     | event service: False
[2025-10-13 07:38:58] 2025-10-13 11:38:25,025 | INFO     | sizes: {0: 2348686, 1: 2348885, 2: 2348913, 12: 2348913, 23: 2348941, 29: 2349231, 35: 2349387, 7559: 2376955, 7560: 2386009, 7567: 2386147}
[2025-10-13 07:38:58] 2025-10-13 11:38:25,025 | INFO     | --------------------------------------------------
[2025-10-13 07:38:58] 2025-10-13 11:38:25,025 | INFO     | 
[2025-10-13 07:38:58] 2025-10-13 11:38:25,025 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-13 07:38:58] 2025-10-13 11:38:25,048 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 07:38:58] 2025-10-13 11:38:25,048 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 07:38:58] 2025-10-13 11:38:25,049 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 07:38:58] 2025-10-13 11:38:25,049 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 07:38:58] 2025-10-13 11:38:25,049 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 07:38:58] 2025-10-13 11:38:25,049 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 07:38:58] 2025-10-13 11:38:25,049 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 07:38:58] 2025-10-13 11:38:25,049 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 07:38:58] 2025-10-13 11:38:25,049 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 07:38:58] 2025-10-13 11:38:25,049 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 07:38:58] 2025-10-13 11:38:25,049 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 07:38:58] 2025-10-13 11:38:25,049 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 07:38:58] 2025-10-13 11:38:25,049 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 07:38:58] 2025-10-13 11:38:25,049 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 07:38:58] 2025-10-13 11:38:25,049 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 07:38:58] 2025-10-13 11:38:25,050 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 07:38:58] 2025-10-13 11:38:25,050 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 07:38:58] 2025-10-13 11:38:25,050 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 07:38:58] 2025-10-13 11:38:25,050 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 07:38:58] 2025-10-13 11:38:25,050 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 07:38:58] 2025-10-13 11:38:25,050 | INFO     | job 6840969855 has completed (purged errors)
[2025-10-13 07:38:58] 2025-10-13 11:38:25,050 | INFO     | overall cleanup function is called
[2025-10-13 07:38:58] 2025-10-13 11:38:26,058 | INFO     | --- collectZombieJob: --- 10, [1094226]
[2025-10-13 07:38:58] 2025-10-13 11:38:26,058 | INFO     | zombie collector waiting for pid 1094226
[2025-10-13 07:38:58] 2025-10-13 11:38:26,058 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 07:38:58] 2025-10-13 11:38:26,058 | INFO     | collected zombie processes
[2025-10-13 07:38:58] 2025-10-13 11:38:26,058 | INFO     | will attempt to kill all subprocesses of pid=1094226
[2025-10-13 07:38:58] 2025-10-13 11:38:26,334 | INFO     | process IDs to be killed: [1094226] (in reverse order)
[2025-10-13 07:38:58] 2025-10-13 11:38:26,430 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 07:38:58] 2025-10-13 11:38:26,431 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 07:38:58] 2025-10-13 11:38:26,443 | INFO     | did not find any defunct processes belonging to 1094226
[2025-10-13 07:38:58] 2025-10-13 11:38:26,455 | INFO     | did not find any defunct processes belonging to 1094226
[2025-10-13 07:38:58] 2025-10-13 11:38:26,455 | INFO     | ready for new job
[2025-10-13 07:38:58] 2025-10-13 11:38:26,455 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 07:38:58] 2025-10-13 11:38:26,457 | INFO     | ***************************************
[2025-10-13 07:38:58] 2025-10-13 11:38:26,458 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 07:38:58] 2025-10-13 11:38:26,458 | INFO     | ***************************************
[2025-10-13 07:38:58] 2025-10-13 11:38:26,458 | INFO     | 
[2025-10-13 07:38:58] 2025-10-13 11:38:26,462 | INFO     | architecture information:
[2025-10-13 07:38:58] 2025-10-13 11:38:26,463 | INFO     | executing command: cat /etc/os-release
[2025-10-13 07:38:58] 2025-10-13 11:38:26,487 | INFO     | cat /etc/os-release:
[2025-10-13 07:38:58] NAME="CentOS Linux"
[2025-10-13 07:38:58] VERSION="7 (Core)"
[2025-10-13 07:38:58] ID="centos"
[2025-10-13 07:38:58] ID_LIKE="rhel fedora"
[2025-10-13 07:38:58] VERSION_ID="7"
[2025-10-13 07:38:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 07:38:58] ANSI_COLOR="0;31"
[2025-10-13 07:38:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 07:38:58] HOME_URL="https://www.centos.org/"
[2025-10-13 07:38:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 07:38:58] 
[2025-10-13 07:38:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 07:38:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 07:38:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 07:38:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 07:38:58] 
[2025-10-13 07:38:58] 2025-10-13 11:38:26,488 | INFO     | ***************************************
[2025-10-13 07:38:58] 2025-10-13 11:38:26,991 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-13 07:38:58] 2025-10-13 11:38:27,013 | INFO     | sufficient remaining disk space (74479304704 B)
[2025-10-13 07:38:58] 2025-10-13 11:38:27,013 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 07:38:58] 2025-10-13 11:38:27,013 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 07:38:58] 2025-10-13 11:38:27,013 | INFO     | update_server=False
[2025-10-13 07:38:58] 2025-10-13 11:38:27,014 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 07:38:58] 2025-10-13 11:38:27,014 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:38:58] 2025-10-13 11:38:27,014 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:38:58] 2025-10-13 11:38:27,014 | INFO     | aborting loop
[2025-10-13 07:38:58] 2025-10-13 11:38:27,832 | INFO     | all data control threads have been joined
[2025-10-13 07:38:58] 2025-10-13 11:38:27,936 | INFO     | all payload control threads have been joined
[2025-10-13 07:38:58] 2025-10-13 11:38:28,019 | INFO     | [job] queue monitor thread has finished
[2025-10-13 07:38:58] 2025-10-13 11:38:28,019 | INFO     | [job] retrieve thread has finished
[2025-10-13 07:38:58] 2025-10-13 11:38:28,020 | INFO     | [job] job monitor thread has finished
[2025-10-13 07:38:58] 2025-10-13 11:38:28,295 | INFO     | [payload] failed_post thread has finished
[2025-10-13 07:38:58] 2025-10-13 11:38:28,354 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 07:38:58] 2025-10-13 11:38:28,461 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 07:38:58] 2025-10-13 11:38:28,502 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 07:38:58] 2025-10-13 11:38:28,587 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 07:38:58] 2025-10-13 11:38:28,673 | INFO     | all job control threads have been joined
[2025-10-13 07:38:58] 2025-10-13 11:38:28,840 | INFO     | [data] control thread has finished
[2025-10-13 07:38:58] 2025-10-13 11:38:28,941 | INFO     | [payload] control thread has finished
[2025-10-13 07:38:58] 2025-10-13 11:38:28,998 | INFO     | [data] copytool_in thread has finished
[2025-10-13 07:38:58] 2025-10-13 11:38:29,056 | INFO     | [job] validate thread has finished
[2025-10-13 07:38:58] 2025-10-13 11:38:29,203 | INFO     | [payload] validate_post thread has finished
[2025-10-13 07:38:58] 2025-10-13 11:38:29,423 | INFO     | [monitor] cgroup control has ended
[2025-10-13 07:38:58] 2025-10-13 11:38:29,458 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 07:38:58] 2025-10-13 11:38:29,679 | INFO     | [job] control thread has finished
[2025-10-13 07:38:58] 2025-10-13 11:38:30,507 | INFO     | [data] copytool_out thread has finished
[2025-10-13 07:38:58] 2025-10-13 11:38:32,594 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 07:38:58] 2025-10-13 11:38:37,754 | INFO     | job.realtimelogging is not enabled
[2025-10-13 07:38:58] 2025-10-13 11:38:38,759 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 07:38:58] 2025-10-13 11:38:40,313 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139631625557824)>', '<ExcThread(monitor, started 139630997403392)>']
[2025-10-13 07:38:58] 2025-10-13 11:38:45,344 | INFO     | all workflow threads have been joined
[2025-10-13 07:38:58] 2025-10-13 11:38:45,344 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 07:38:58] 2025-10-13 11:38:45,345 | INFO     | traces error code: 0
[2025-10-13 07:38:58] 2025-10-13 11:38:45,345 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 07:38:58] 2025-10-13 11:38:57,275 | INFO     | PID=1082498 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 07:38:58] 2025-10-13 11:38:57,275 | INFO     | .. there are 14 such processes running
[2025-10-13 07:38:58] 2025-10-13 11:38:57,276 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 07:38:58] 2025-10-13 11:38:57,276 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 07:38:58] 2025-10-13 11:38:57,276 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 07:38:58] 2025-10-13 11:38:57,276 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 07:38:58] 2025-10-13 11:38:57,277 | INFO     | [monitor] control thread has ended
[2025-10-13 07:38:58] 2025-10-13 11:38:57,907 [wrapper] ==== pilot stdout END ====
[2025-10-13 07:38:58] 2025-10-13 11:38:57,910 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 07:38:58] 2025-10-13 11:38:57,913 [wrapper] pilotpid: 1082498
[2025-10-13 07:38:58] 2025-10-13 11:38:57,918 [wrapper] Pilot exit status: 0
[2025-10-13 07:38:58] 2025-10-13 11:38:57,937 [wrapper] pandaids: 6840969855
[2025-10-13 07:38:58] 2025-10-13 11:38:57,997 [wrapper] cleanup supervisor_pilot 1322955 1082499
[2025-10-13 07:38:58] 2025-10-13 11:38:58,001 [wrapper] Test setup, not cleaning
[2025-10-13 07:38:58] 2025-10-13 11:38:58,007 [wrapper] apfmon messages muted
[2025-10-13 07:38:58] 2025-10-13 11:38:58,010 [wrapper] ==== wrapper stdout END ====
[2025-10-13 07:38:58] 2025-10-13 11:38:58,014 [wrapper] ==== wrapper stderr END ====
[2025-10-13 07:38:58]  *** Error codes and diagnostics ***
[2025-10-13 07:38:58]     "exeErrorCode": 0,
[2025-10-13 07:38:58]     "exeErrorDiag": "",
[2025-10-13 07:38:58]     "pilotErrorCode": 0,
[2025-10-13 07:38:58]     "pilotErrorDiag": "",
[2025-10-13 07:38:58]  *** Listing of results directory ***
[2025-10-13 07:38:58] total 411748
[2025-10-13 07:38:58] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 19:51 pilot3.tar.gz
[2025-10-13 07:38:58] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 19:53 queuedata.json
[2025-10-13 07:38:58] -rwx------. 1 boincer umatlas     36292 Oct 12 19:54 runpilot2-wrapper.sh
[2025-10-13 07:38:58] -rw-r--r--. 1 boincer umatlas       100 Oct 13 05:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 07:38:58] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 05:30 run_atlas
[2025-10-13 07:38:58] -rw-r--r--. 1 boincer umatlas       105 Oct 13 05:30 job.xml
[2025-10-13 07:38:58] -rw-r--r--. 2 boincer umatlas 221678238 Oct 13 05:30 EVNT.46676267._004670.pool.root.1
[2025-10-13 07:38:58] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 05:30 start_atlas.sh
[2025-10-13 07:38:58] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 05:30 shared
[2025-10-13 07:38:58] -rw-r--r--. 2 boincer umatlas    569680 Oct 13 05:30 input.tar.gz
[2025-10-13 07:38:58] -rw-r--r--. 1 boincer umatlas         0 Oct 13 05:30 boinc_lockfile
[2025-10-13 07:38:58] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 05:30 pandaJob.out
[2025-10-13 07:38:58] -rw-------. 1 boincer umatlas    972849 Oct 13 05:31 agis_schedconf.cvmfs.json
[2025-10-13 07:38:58] -rw-------. 1 boincer umatlas   1560580 Oct 13 05:31 agis_ddmendpoints.agis.ALL.json
[2025-10-13 07:38:58] drwx------. 5 boincer umatlas      4096 Oct 13 05:31 pilot3
[2025-10-13 07:38:58] -rw-r--r--. 1 boincer umatlas      6841 Oct 13 07:28 init_data.xml
[2025-10-13 07:38:58] -rw-r--r--. 1 boincer umatlas       529 Oct 13 07:37 boinc_task_state.xml
[2025-10-13 07:38:58] -rw-------. 1 boincer umatlas 193163364 Oct 13 07:37 HITS.46676269._092539.pool.root.1
[2025-10-13 07:38:58] -rw-------. 1 boincer umatlas      1044 Oct 13 07:38 memory_monitor_summary.json
[2025-10-13 07:38:58] -rw-------. 1 boincer umatlas    380666 Oct 13 07:38 log.46676269._092539.job.log.tgz.1
[2025-10-13 07:38:58] -rw-------. 1 boincer umatlas      7835 Oct 13 07:38 heartbeat.json
[2025-10-13 07:38:58] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 07:38 boinc_mmap_file
[2025-10-13 07:38:58] -rw-r--r--. 1 boincer umatlas        27 Oct 13 07:38 wrapper_checkpoint.txt
[2025-10-13 07:38:58] -rw-------. 1 boincer umatlas        95 Oct 13 07:38 pilot_heartbeat.json
[2025-10-13 07:38:58] -rw-------. 1 boincer umatlas       823 Oct 13 07:38 pilotlog.txt
[2025-10-13 07:38:58] -rw-------. 1 boincer umatlas   1064273 Oct 13 07:38 log.46676269._092539.job.log.1
[2025-10-13 07:38:58] -rw-------. 1 boincer umatlas       357 Oct 13 07:38 output.list
[2025-10-13 07:38:58] -rw-r--r--. 1 boincer umatlas       620 Oct 13 07:38 runtime_log
[2025-10-13 07:38:58] -rw-------. 1 boincer umatlas   1464320 Oct 13 07:38 result.tar.gz
[2025-10-13 07:38:58] -rw-r--r--. 1 boincer umatlas      8713 Oct 13 07:38 runtime_log.err
[2025-10-13 07:38:58] -rw-------. 1 boincer umatlas       655 Oct 13 07:38 jfqKDmo4KS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmi6lNDmJTCsbn.diag
[2025-10-13 07:38:58] -rw-r--r--. 1 boincer umatlas     21264 Oct 13 07:38 stderr.txt
[2025-10-13 07:38:58] HITS file was successfully produced:
[2025-10-13 07:38:58] -rw-------. 1 boincer umatlas 193163364 Oct 13 07:37 shared/HITS.pool.root.1
[2025-10-13 07:38:58]  *** Contents of shared directory: ***
[2025-10-13 07:38:58] total 407140
[2025-10-13 07:38:58] -rw-r--r--. 2 boincer umatlas 221678238 Oct 13 05:30 ATLAS.root_0
[2025-10-13 07:38:58] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 05:30 start_atlas.sh
[2025-10-13 07:38:58] -rw-r--r--. 2 boincer umatlas    569680 Oct 13 05:30 input.tar.gz
[2025-10-13 07:38:58] -rw-------. 1 boincer umatlas 193163364 Oct 13 07:37 HITS.pool.root.1
[2025-10-13 07:38:58] -rw-------. 1 boincer umatlas   1464320 Oct 13 07:38 result.tar.gz
07:38:59 (1076646): run_atlas exited; CPU time 40164.598072
07:38:59 (1076646): called boinc_finish(0)

</stderr_txt>
]]>

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